Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005303

Physical Location & Seq

Genomic Coordinates Forward (+)

19624004 .. 19626299

Gene Structure 2296 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g18730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGAACTTCCCAAAAGGAGTCATGGATTTTCTTCTTTTGGGTTTTCACCAAACCCTCCGGCAAAGTTACGAGAAATTTATATGCGTACCTGAAACACAAGTCACGTGGTGTATTATTTTATATGTTGTAATAAGCGTAAACAACGAATCAACTGGTTATCATTTAAGTGGAATAGTAATGTTACGTGACTGTGTTCCAAGTACACATAAAAGTTACATCAAAGCTTTGGCTTCTCCTCTACGAACCCTAACTTGTACAGCAAACACACAGTTTGGTGTGTTAGCTCATCTCCTCTATTTCATACACACTATCCCACAAATATCCCATTTTCTCTCTCACTTCCACTCGTCCCCCCATATAACACCATACAGAATTGAAACCAGAAACTTGTGCTACAAACTATCGACCCGATTTTATGAAATGAAGCACCTGTGTTGCAGTGACAGTTCGAGGACTGTTCCGAAGTTCATCTTGAAGGATGTGAGTTGTGAAGCAAGGCCTGCAGAGATCACTGCAATTGCTGGCCCTAGTGGGGCTGGAAAAACCACACTGCTAGATATTCTTGCTGGGAAGATATCCCCAAAGAAAATGGGTGGTCAGGTGCTGGTGAATGATCAGCCTATGGACACGAAAAGTTTCCGCAGAATGTCGGGCTATGTCACACAGGATGATGCCCTATTTCCGTTACTTACAGTTGAAGAAACGCTCGTGTACAGTGCTCTATTGAGGCTTCCTGGTGGGAGAAAAGAGGCTGCAGATAAAGTGAGGAAGCTGATGAAGGAGCTCGGGCTGGAACATGTCGCGGGTTCAAGAATCGGTTGGGGATCAAACAATGGGATTTCAGGTGGTGAAAGGCGCAGGGTTTCGATTGGAGTTGATTTAGTTCATGATCCAGCTGTGGTTTTGATTGATGAACCAACTTCAGGGTTGGATTCTGCCTCAGCTTTCCATGTAGTCTCATTGCTCAAAACAATGGTGTTCAATCAGGGTAAAACTATCGTTCTGACCATTCACCAACCAGGTTTTCGAATCCTAGAGATGTTCGATCGCATTGTTTTGCTTTCGAATGGAGCTGTCATGCACAATGGATCACTACATCTTCTCAAACAAAGGCTCAATTTTGTTGGCCATCGTATCCCCAACCATGTCAACTTGCTCGAATTCGCCATTGATGTTATCAAGAGCTTGGAGGGTACACAAACAACAGAAGCCTTGCACAACCAATGTTTCAGGCCTCTGGAACAAAGGCTTGTATGCTCTAATAACTTGGAAAAGAAGCTTCTAGTCTACCCGAATTCTCGTCCCCGGGAAGTTGTTATACTAGGGCAAAGATTTTGTAGCAACATATTTAGAACCAATCAATTGTTTGTCACAAGAGTCATACAAGCCTTGGTAGCTGGATTCGTACTGGGAAGCATTTTCTTTAATGATGGAAGGGAAAAAGGGAGCATTGCCTTGCAAACACAAACTGGATTTTTCGCCTTCAGCCTCACTTTCTTGCTGTCTTCCACCACAGAAGGCCTGCCGATTTTCTTACAAGAGCGAAGAATACTAATGAGTGAGACTTCCAGGGGAGCATATAGAGTTTCCTCCTATGTCATAGCAAACACCCTCATTTTTCTCCCCTTCCTTTTGATGGTCTGTTTTTTGTTCACTGCACCGGTTTACTGGCTAGTCGGATTGAGGAGGGACATTGATGGATTCCTCTACTTCTCTCTGGTGGTCTGGATGGTTCTTCTGATGTCCAATTCTGTTGTGGCCTGCTTCAGTGCTCTCGTGCCGAACTTCATCATGGGCAGTTCCCTGATTTCTGGGCTCATGGGAGCTTTCTTTCTCTTTTCGGGCTACTTCATTTCGAAGGACAGACTCCCACGCTACTGGATGTTCATGCACTACTTGTCTCTTTTCAAGTACCCGTTCGAGTGCTTTATGATAAATGAGTATGGAGGGGAGCAGGGAAGGAGATGCATTCAACAGATTGACAAGGAAGGATGCAATCTTTTCGGGGACGGATTCTTGAGACAGCAGGGTTTGAAAGATGCACAGAAATGGAGCAATTTAGGTGTGATGCTGGGTTTCGTAATTGGTTATAGAGTGCTTTGCTTTCTCATTCTACTTACACAAAAGATAAACAATCACTTGTGCTGTTTCTGTTTCAAATTCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko01523 ko02010 ko04976 map01523 map02010 map04976

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

723

Amino Acids

81.48

Weight (kDa)

9.18

Isoelectric Point (pI)

35.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	158 - 308	1.4e-29	ABC transporter
ABC2_membrane	PF01061	437 - 648	1.2e-48	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53270
fragaria_vesca	FvH4_3g18590 FvH4_6g27140
malus_domestica	MD03G1240800.v1.1 MD11G1260200.v1.1
prunus_persica	Prupe.3G122400_v2.0.a1 Prupe.3G122400_v2.0.a1 Prupe.4G168100_v2.0.a1
pyrus_communis	pycom03g18730 pycom11g22970
rosa_chinensis	RchiOBHm_Chr2g0129131 RchiOBHm_Chr5g0031401
rosa_laevigata	RLG00000019057 RLG00000033304
rosa_multiflora	Rmu_sc0007782.1_g000009 Rmu_sc0009045.1_g000001 Rmu_sc0018148.1_g000005
rosa_roxburghii	Rroxscaffold_1G00048940 Rroxscaffold_2G00114830
rosa_rugosa	Rorug02G0285000 Rorug05G0125000
rosa_samantha	Rh2AG337100 Rh2BG345100 Rh2CG324500 Rh2DG361900 Rh5BG217300 Rh5CG241100 Rh5DG222700
rosa_wichuraiana	Rw2G027340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1287
AccII	CGCG	1 cut(s)	803
AciI	CCGC	2 cut(s)	640, 803
AclWI	GGATC	3 cut(s)	832, 884, 1096
AcoI	YGGCCR	1 cut(s)	1126
AcsI	RAATTY	4 cut(s)	74, 1160, 1294, 2159
AcuI	CTGAAG	3 cut(s)	906, 1468, 1750
AcvI	CACGTG	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	108
AfaI	GTAC	7 cut(s)	87, 202, 256, 713, 1195, 1407, 1913
AfiI	CCNNNNNNNGG	3 cut(s)	532, 923, 1636
AflIII	ACRYGT	1 cut(s)	796
AgeI	ACCGGT	1 cut(s)	1660
AgsI	TTSAA	9 cut(s)	377, 475, 698, 810, 982, 1909, 1973, 2035, 2158
AjnI	CCWGG	3 cut(s)	733, 1018, 1568
AjuI	GAANNNNNNNTTGG	2 cut(s)	1008, 1040
Alw21I	GWGCWC	3 cut(s)	721, 786, 1774
Alw26I	GTCTC	4 cut(s)	961, 1556, 1905, 2014
AlwI	GGATC	3 cut(s)	832, 884, 1096
AlwNI	CAGNNNCTG	1 cut(s)	604
Ama87I	CYCGRG	2 cut(s)	785, 1305
AoxI	GGCC	6 cut(s)	497, 523, 1126, 1232, 1519, 1758
ApeKI	GCWGC	1 cut(s)	752
ApoI	RAATTY	4 cut(s)	74, 1160, 1294, 2159
AsiGI	ACCGGT	1 cut(s)	1660
Asp700I	GAANNNNTTC	1 cut(s)	635
AspLEI	GCGC	1 cut(s)	858
AspS9I	GGNCC	1 cut(s)	524
AsuC2I	CCSGG	2 cut(s)	1306, 1307
AsuHPI	GGTGA	4 cut(s)	38, 619, 860, 1004
AsuII	TTCGAA	3 cut(s)	1027, 1064, 1856
AvaI	CYCGRG	2 cut(s)	785, 1305
BalI	TGGCCA	1 cut(s)	1128
BanII	GRGCYC	2 cut(s)	786, 1818
BarI	GAAGNNNNNNTAC	2 cut(s)	1302, 1334
BauI	CACGAG	2 cut(s)	707, 1775
BbrPI	CACGTG	1 cut(s)	105
BbsI	GAAGAC	1 cut(s)	1497
Bbv12I	GWGCWC	3 cut(s)	721, 786, 1774
BbvCI	CCTCAGC	1 cut(s)	940
BbvI	GCAGC	1 cut(s)	739
BccI	CCATC	5 cut(s)	1137, 1424, 1630, 1691, 1723
BcgI	CGANNNNNNTGC	2 cut(s)	1984, 2018
BciT130I	CCWGG	3 cut(s)	735, 1020, 1570
BciVI	GTATCC	1 cut(s)	1145
BclI	TGATCA	1 cut(s)	613
BcnI	CCSGG	2 cut(s)	1306, 1307
BcoDI	GTCTC	4 cut(s)	961, 1556, 1905, 2014
BfaI	CTAG	6 cut(s)	528, 554, 1034, 1283, 1322, 1673
BfmI	CTRYAG	2 cut(s)	501, 753
BfuI	GTATCC	1 cut(s)	1145
BisI	GCNGC	1 cut(s)	753
BlsI	GCNGC	1 cut(s)	754
Bme1390I	CCNGG	5 cut(s)	735, 1020, 1306, 1307, 1570
BmeT110I	CYCGRG	2 cut(s)	785, 1305
BmgT120I	GGNCC	1 cut(s)	524
BmrFI	CCNGG	5 cut(s)	735, 1020, 1306, 1307, 1570
BmrI	ACTGGG	1 cut(s)	1418
BmsI	GCATC	5 cut(s)	661, 1955, 1982, 2029, 2058
BmuI	ACTGGG	1 cut(s)	1418
BpiI	GAAGAC	1 cut(s)	1497
Bpu10I	CCTNAGC	1 cut(s)	940
Bpu14I	TTCGAA	3 cut(s)	1027, 1064, 1856
BpuEI	CTTGAG	1 cut(s)	2038
BpuMI	CCSGG	2 cut(s)	1306, 1307
BsaAI	YACGTR	2 cut(s)	105, 185
BsaJI	CCNNGG	4 cut(s)	1304, 1305, 1389, 1569
BsaWI	WCCGGW	1 cut(s)	1660
Bsc4I	CCNNNNNNNGG	3 cut(s)	532, 923, 1636
Bse118I	RCCGGY	1 cut(s)	1660
Bse1I	ACTGG	5 cut(s)	157, 1413, 1474, 1673, 1883
Bse3DI	GCAATG	2 cut(s)	959, 1449
BseBI	CCWGG	3 cut(s)	735, 1020, 1570
BseDI	CCNNGG	4 cut(s)	1304, 1305, 1389, 1569
BseGI	GGATG	5 cut(s)	484, 673, 1734, 1887, 1997
BseLI	CCNNNNNNNGG	3 cut(s)	532, 923, 1636
BseMI	GCAATG	2 cut(s)	959, 1449
BseMII	CTCAG	1 cut(s)	954
BseNI	ACTGG	5 cut(s)	157, 1413, 1474, 1673, 1883
BseRI	GAGGAG	3 cut(s)	225, 281, 1699
BseXI	GCAGC	1 cut(s)	739
BseYI	CCCAGC	2 cut(s)	566, 2071
BsgI	GTGCAG	1 cut(s)	1641
Bsh1236I	CGCG	1 cut(s)	803
Bsh1285I	CGRYCG	1 cut(s)	1048
BshFI	GGCC	6 cut(s)	499, 525, 1128, 1234, 1521, 1760
BshTI	ACCGGT	1 cut(s)	1660
BsiEI	CGRYCG	1 cut(s)	1048
BsiHKAI	GWGCWC	3 cut(s)	721, 786, 1774
BsiHKCI	CYCGRG	2 cut(s)	785, 1305
BsiSI	CCGG	3 cut(s)	58, 1306, 1661
BslFI	GGGAC	4 cut(s)	334, 1287, 1703, 2021
BslI	CCNNNNNNNGG	3 cut(s)	532, 923, 1636
BsmAI	GTCTC	4 cut(s)	961, 1556, 1905, 2014
BsmFI	GGGAC	4 cut(s)	334, 1287, 1703, 2021
BsmI	GAATGC	1 cut(s)	1968
BsnI	GGCC	6 cut(s)	499, 525, 1128, 1234, 1521, 1760
BsoBI	CYCGRG	2 cut(s)	785, 1305
Bsp119I	TTCGAA	3 cut(s)	1027, 1064, 1856
Bsp1286I	GDGCHC	4 cut(s)	721, 786, 1774, 1818
Bsp1407I	TGTACA	2 cut(s)	254, 711
Bsp143I	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
BspACI	CCGC	2 cut(s)	640, 803
BspANI	GGCC	6 cut(s)	499, 525, 1128, 1234, 1521, 1760
BspCNI	CTCAG	1 cut(s)	953
BspFNI	CGCG	1 cut(s)	803
BspHI	TCATGA	1 cut(s)	886
BspMAI	CTGCAG	2 cut(s)	505, 757
BspPI	GGATC	3 cut(s)	832, 884, 1096
BspT104I	TTCGAA	3 cut(s)	1027, 1064, 1856
BsrDI	GCAATG	2 cut(s)	959, 1449
BsrFI	RCCGGY	1 cut(s)	1660
BsrGI	TGTACA	2 cut(s)	254, 711
BsrI	ACTGG	5 cut(s)	157, 1413, 1474, 1673, 1883
BssAI	RCCGGY	1 cut(s)	1660
BssECI	CCNNGG	4 cut(s)	1304, 1305, 1389, 1569
BssMI	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
BssSI	CACGAG	2 cut(s)	707, 1775
BssT1I	CCWWGG	1 cut(s)	1389
Bst2BI	CACGAG	2 cut(s)	707, 1775
Bst2UI	CCWGG	3 cut(s)	735, 1020, 1570
Bst4CI	ACNGT	6 cut(s)	191, 270, 446, 457, 694, 716
BstAPI	GCANNNNNTGC	1 cut(s)	500
BstAUI	TGTACA	2 cut(s)	254, 711
BstBAI	YACGTR	2 cut(s)	105, 185
BstBI	TTCGAA	3 cut(s)	1027, 1064, 1856
BstC8I	GCNNGC	4 cut(s)	501, 523, 1523, 1762
BstDEI	CTNAG	1 cut(s)	940
BstF5I	GGATG	5 cut(s)	484, 673, 1734, 1887, 1997
BstFNI	CGCG	1 cut(s)	803
BstHHI	GCGC	1 cut(s)	858
BstKTI	GATC	6 cut(s)	510, 616, 827, 892, 1048, 1091
BstMAI	GTCTC	4 cut(s)	961, 1556, 1905, 2014
BstMBI	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
BstMCI	CGRYCG	1 cut(s)	1048
BstMWI	GCNNNNNNNGC	2 cut(s)	500, 1394
BstNI	CCWGG	3 cut(s)	735, 1020, 1570
BstNSI	RCATGY	1 cut(s)	800
BstSCI	CCNGG	5 cut(s)	733, 1018, 1304, 1305, 1568
BstSFI	CTRYAG	2 cut(s)	501, 753
BstUI	CGCG	1 cut(s)	803
BstV1I	GCAGC	1 cut(s)	739
BstV2I	GAAGAC	1 cut(s)	1497
BstXI	CCANNNNNNTGG	1 cut(s)	1878
BsuI	GTATCC	1 cut(s)	1145
BsuRI	GGCC	6 cut(s)	499, 525, 1128, 1234, 1521, 1760
BtsCI	GGATG	5 cut(s)	484, 673, 1734, 1887, 1997
BtsI	GCAGTG	4 cut(s)	445, 510, 548, 1653
BtsIMutI	CAGTG	6 cut(s)	445, 510, 548, 721, 1653, 1774
Cac8I	GCNNGC	4 cut(s)	501, 523, 1523, 1762
CaiI	CAGNNNCTG	1 cut(s)	604
CciI	TCATGA	1 cut(s)	886
CfoI	GCGC	1 cut(s)	858
Cfr10I	RCCGGY	1 cut(s)	1660
Cfr13I	GGNCC	1 cut(s)	524
Cfr9I	CCCGGG	1 cut(s)	1305
CsiI	ACCWGGT	1 cut(s)	1018
Csp6I	GTAC	7 cut(s)	86, 201, 255, 712, 1194, 1406, 1912
CspAI	ACCGGT	1 cut(s)	1660
CspCI	CAANNNNNGTGG	2 cut(s)	86, 121
CviAII	CATG	9 cut(s)	22, 797, 887, 950, 1078, 1145, 1792, 1819, 1888
CviQI	GTAC	7 cut(s)	86, 201, 255, 712, 1194, 1406, 1912
DdeI	CTNAG	1 cut(s)	940
DpnI	GATC	6 cut(s)	509, 615, 826, 891, 1047, 1090
DpnII	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
DraIII	CACNNNGTG	1 cut(s)	108
EaeI	YGGCCR	1 cut(s)	1126
Ecl136II	GAGCTC	1 cut(s)	784
Eco130I	CCWWGG	1 cut(s)	1389
Eco147I	AGGCCT	3 cut(s)	499, 1234, 1521
Eco24I	GRGCYC	2 cut(s)	786, 1818
Eco32I	GATATC	1 cut(s)	576
Eco53kI	GAGCTC	1 cut(s)	784
Eco57I	CTGAAG	3 cut(s)	906, 1468, 1750
Eco72I	CACGTG	1 cut(s)	105
Eco88I	CYCGRG	2 cut(s)	785, 1305
EcoICRI	GAGCTC	1 cut(s)	784
EcoRI	GAATTC	2 cut(s)	1160, 1294
EcoRII	CCWGG	3 cut(s)	733, 1018, 1568
EcoRV	GATATC	1 cut(s)	576
EcoT14I	CCWWGG	1 cut(s)	1389
EcoT22I	ATGCAT	1 cut(s)	1970
EcoT38I	GRGCYC	2 cut(s)	786, 1818
ErhI	CCWWGG	1 cut(s)	1389
FaeI	CATG	9 cut(s)	25, 800, 890, 953, 1081, 1148, 1795, 1822, 1891
FalI	AAGNNNNNCTT	2 cut(s)	455, 487
FaqI	GGGAC	4 cut(s)	334, 1287, 1703, 2021
FatI	CATG	9 cut(s)	21, 796, 886, 949, 1077, 1144, 1791, 1818, 1887
FauI	CCCGC	1 cut(s)	796
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	1 cut(s)	1287
Fnu4HI	GCNGC	1 cut(s)	753
FokI	GGATG	5 cut(s)	491, 680, 1741, 1894, 2004
FriOI	GRGCYC	2 cut(s)	786, 1818
Fsp4HI	GCNGC	1 cut(s)	753
FspBI	CTAG	6 cut(s)	528, 554, 1034, 1283, 1322, 1673
GlaI	GCGC	1 cut(s)	857
GluI	GCNGC	1 cut(s)	753
GsaI	CCCAGC	2 cut(s)	570, 2075
HaeIII	GGCC	6 cut(s)	499, 525, 1128, 1234, 1521, 1760
HapII	CCGG	3 cut(s)	58, 1306, 1661
HhaI	GCGC	1 cut(s)	858
Hin1II	CATG	9 cut(s)	25, 800, 890, 953, 1081, 1148, 1795, 1822, 1891
Hin6I	GCGC	1 cut(s)	856
HinP1I	GCGC	1 cut(s)	856
HincII	GTYRAC	1 cut(s)	1150
HindII	GTYRAC	1 cut(s)	1150
HindIII	AAGCTT	2 cut(s)	222, 1277
HpaII	CCGG	3 cut(s)	58, 1306, 1661
HphI	GGTGA	4 cut(s)	38, 619, 860, 1004
Hpy166II	GTNNAC	8 cut(s)	139, 203, 712, 1150, 1196, 1288, 1653, 1666
Hpy188I	TCNGA	4 cut(s)	462, 1005, 1679, 1740
Hpy188III	TCNNGA	7 cut(s)	472, 810, 887, 1180, 1238, 1726, 2017
Hpy8I	GTNNAC	8 cut(s)	139, 203, 712, 1150, 1196, 1288, 1653, 1666
HpyAV	CCTTC	9 cut(s)	469, 772, 1428, 1492, 1511, 1636, 1852, 1953, 1982
HpyCH4III	ACNGT	6 cut(s)	191, 270, 446, 457, 694, 716
HpyCH4IV	ACGT	2 cut(s)	104, 184
HpyF10VI	GCNNNNNNNGC	2 cut(s)	500, 1394
HpyF3I	CTNAG	1 cut(s)	940
HpySE526I	ACGT	2 cut(s)	104, 184
Hsp92II	CATG	9 cut(s)	25, 800, 890, 953, 1081, 1148, 1795, 1822, 1891
HspAI	GCGC	1 cut(s)	856
Ksp22I	TGATCA	1 cut(s)	613
Kzo9I	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
LmnI	GCTCC	7 cut(s)	781, 1070, 1446, 1574, 1823, 1951, 2052
Lsp1109I	GCAGC	1 cut(s)	739
LweI	GCATC	5 cut(s)	661, 1955, 1982, 2029, 2058
MabI	ACCWGGT	1 cut(s)	1018
MaeI	CTAG	6 cut(s)	528, 554, 1034, 1283, 1322, 1673
MaeII	ACGT	2 cut(s)	104, 184
MaeIII	GTNAC	9 cut(s)	65, 100, 180, 185, 212, 440, 658, 684, 1369
MalI	GATC	6 cut(s)	509, 615, 826, 891, 1047, 1090
MboI	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
MboII	GAAGA	7 cut(s)	23, 583, 710, 1091, 1497, 1557, 1727
MfeI	CAATTG	2 cut(s)	516, 1361
MhlI	GDGCHC	4 cut(s)	721, 786, 1774, 1818
MlsI	TGGCCA	1 cut(s)	1128
MluNI	TGGCCA	1 cut(s)	1128
MlyI	GAGTC	3 cut(s)	27, 1386, 1860
MmeI	TCCRAC	2 cut(s)	909, 1657
Mox20I	TGGCCA	1 cut(s)	1128
Mph1103I	ATGCAT	1 cut(s)	1970
MroXI	GAANNNNTTC	1 cut(s)	635
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	2 cut(s)	164, 1425
MslI	CAYNNNNRTG	2 cut(s)	165, 2047
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	1 cut(s)	896
MspI	CCGG	3 cut(s)	58, 1306, 1661
MspR9I	CCNGG	5 cut(s)	735, 1020, 1306, 1307, 1570
MunI	CAATTG	2 cut(s)	516, 1361
Mva1269I	GAATGC	1 cut(s)	1968
MvaI	CCWGG	3 cut(s)	735, 1020, 1570
MvnI	CGCG	1 cut(s)	803
MwoI	GCNNNNNNNGC	2 cut(s)	500, 1394
NciI	CCSGG	2 cut(s)	1306, 1307
NdeII	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
NlaIII	CATG	9 cut(s)	25, 800, 890, 953, 1081, 1148, 1795, 1822, 1891
NmuCI	GTSAC	5 cut(s)	100, 185, 440, 658, 1369
NsiI	ATGCAT	1 cut(s)	1970
NspI	RCATGY	1 cut(s)	800
NspV	TTCGAA	3 cut(s)	1027, 1064, 1856
PagI	TCATGA	1 cut(s)	886
PceI	AGGCCT	3 cut(s)	499, 1234, 1521
PciI	ACATGT	1 cut(s)	796
PctI	GAATGC	1 cut(s)	1968
PdmI	GAANNNNTTC	1 cut(s)	635
PfeI	GAWTC	7 cut(s)	146, 813, 932, 1029, 1401, 1701, 2013
PinAI	ACCGGT	1 cut(s)	1660
PkrI	GCNGC	1 cut(s)	754
Ple19I	CGATCG	1 cut(s)	1048
PleI	GAGTC	3 cut(s)	26, 1385, 1860
PmaCI	CACGTG	1 cut(s)	105
PmlI	CACGTG	1 cut(s)	105
PpsI	GAGTC	3 cut(s)	26, 1385, 1860
Ppu21I	YACGTR	2 cut(s)	105, 185
PscI	ACATGT	1 cut(s)	796
Psp124BI	GAGCTC	1 cut(s)	786
Psp6I	CCWGG	3 cut(s)	733, 1018, 1568
PspCI	CACGTG	1 cut(s)	105
PspFI	CCCAGC	2 cut(s)	566, 2071
PspGI	CCWGG	3 cut(s)	733, 1018, 1568
PspPI	GGNCC	1 cut(s)	524
PstI	CTGCAG	2 cut(s)	505, 757
PstNI	CAGNNNCTG	1 cut(s)	604
PvuI	CGATCG	1 cut(s)	1048
PvuII	CAGCTG	1 cut(s)	896
RsaI	GTAC	7 cut(s)	87, 202, 256, 713, 1195, 1407, 1913
RsaNI	GTAC	7 cut(s)	86, 201, 255, 712, 1194, 1406, 1912
RseI	CAYNNNNRTG	2 cut(s)	165, 2047
SacI	GAGCTC	1 cut(s)	786
SaqAI	TTAA	2 cut(s)	164, 1425
SatI	GCNGC	1 cut(s)	753
Sau3AI	GATC	6 cut(s)	507, 613, 824, 889, 1045, 1088
Sau96I	GGNCC	1 cut(s)	524
SchI	GAGTC	3 cut(s)	27, 1386, 1860
ScrFI	CCNGG	5 cut(s)	735, 1020, 1306, 1307, 1570
SduI	GDGCHC	4 cut(s)	721, 786, 1774, 1818
SexAI	ACCWGGT	1 cut(s)	1018
SfaNI	GCATC	5 cut(s)	661, 1955, 1982, 2029, 2058
SfcI	CTRYAG	2 cut(s)	501, 753
SfuI	TTCGAA	3 cut(s)	1027, 1064, 1856
SmaI	CCCGGG	1 cut(s)	1307
SmiMI	CAYNNNNRTG	2 cut(s)	165, 2047
SmlI	CTYRAG	1 cut(s)	2017
SmoI	CTYRAG	1 cut(s)	2017
SseBI	AGGCCT	3 cut(s)	499, 1234, 1521
SsiI	CCGC	2 cut(s)	640, 803
SspMI	CTAG	6 cut(s)	528, 554, 1034, 1283, 1322, 1673
SstI	GAGCTC	1 cut(s)	786
StuI	AGGCCT	3 cut(s)	499, 1234, 1521
StyD4I	CCNGG	5 cut(s)	733, 1018, 1304, 1305, 1568
StyI	CCWWGG	1 cut(s)	1389
TaaI	ACNGT	6 cut(s)	191, 270, 446, 457, 694, 716
TaiI	ACGT	2 cut(s)	107, 187
TaqI	TCGA	9 cut(s)	404, 449, 866, 1027, 1044, 1064, 1158, 1856, 1920
TatI	WGTACW	3 cut(s)	200, 254, 711
TfiI	GAWTC	7 cut(s)	146, 813, 932, 1029, 1401, 1701, 2013
Tru1I	TTAA	2 cut(s)	164, 1425
Tru9I	TTAA	2 cut(s)	164, 1425
TscAI	CASTG	6 cut(s)	445, 517, 555, 721, 1660, 1774
TseFI	GTSAC	5 cut(s)	100, 185, 440, 658, 1369
TseI	GCWGC	1 cut(s)	752
Tsp45I	GTSAC	5 cut(s)	100, 185, 440, 658, 1369
TspGWI	ACGGA	2 cut(s)	672, 2025
TspMI	CCCGGG	1 cut(s)	1305
TspRI	CASTG	6 cut(s)	445, 517, 555, 721, 1660, 1774
XapI	RAATTY	4 cut(s)	74, 1160, 1294, 2159
XceI	RCATGY	1 cut(s)	800
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1753
XmaI	CCCGGG	1 cut(s)	1305
XmiI	GTMKAC	1 cut(s)	1287
XmnI	GAANNNNTTC	1 cut(s)	635
XspI	CTAG	6 cut(s)	528, 554, 1034, 1283, 1322, 1673
Zsp2I	ATGCAT	1 cut(s)	1970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.