Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0014968

Physical Location & Seq

Genomic Coordinates Reverse (-)

14478413 .. 14482765

Gene Structure 4353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G137100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 564 bp

ATGGCGACGATAACTGACTCCATCGTTCTCTATTCTTCGGCTCAAAATTCATATCTCCGGCCGGTGATATCGTCAAGGCCGGCTCTTTCCATCTCTGTTCGCCGGAGACTGGGTGCGTTGCCGGAATTCAGGGGCTTGAGGGTTCACTTGCTTCCCAAACCGTCGCCCGCTCCCTCCAATTTTCCAAAAGCCAGGCCTTTTCCATCAACTGCCGGCATTGTCTCTCAAGCTCAGGATACCACTCTCGATGTTCCTACAGTTACGGATAGAACATGGAACTCACTGGTCCTCAAAGCTGATGGCCCTGTATTGGTTGAGTTTTGGGCTCCATGGTGTGGGCCTTGCCGCACGATCCATCCAGTAGTAGGTGAACTAGCAAAGGAGTATGCTGGGAAGCTTAAGTGCTTTAAGTTAAGCACGGATGATACTCCTTCAATTGCAACCCAATATGGAATTCGAAGTGTCCCAACCATCATGATTTTCATCAATGGTGAGAAAAAGGACGCAATAATTGGTGCTGTGCCTAAAACCACATTGACTGCTACCATTGAGAAATTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0004857 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006109 GO:0006950 GO:0006979 GO:0008047 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009636 GO:0009941 GO:0009987 GO:0010319 GO:0015035 GO:0015036 GO:0016020 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019222 GO:0019725 GO:0030234 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0033554 GO:0034357 GO:0034599 GO:0042221 GO:0042592 GO:0042651 GO:0043085 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0047134 GO:0048046 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051716 GO:0055035 GO:0055114 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0080090 GO:0097237 GO:0098754 GO:0098772 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko04621 ko05418 map04621 map05418

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

188

Amino Acids

20.36

Weight (kDa)

9.63

Isoelectric Point (pI)

42.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03680 AT4G03520
fragaria_vesca	FvH4_6g26180
prunus_persica	Prupe.3G137100_v2.0.a1 Prupe.3G137100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0126351
rosa_laevigata	RLG00000018902
rosa_multiflora	Rmu_sc0007825.1_g000009 Rmu_sc0022556.1_g000002
rosa_roxburghii	Rroxscaffold_2G00117230
rosa_rugosa	Rorug02G0262800
rosa_samantha	Rh2AG319800 Rh2BG328100 Rh2CG307900 Rh2DG347700
rosa_wichuraiana	Rw2G025910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	335
AccBSI	CCGCTC	1 cut(s)	170
AciI	CCGC	2 cut(s)	168, 346
AclWI	GGATC	1 cut(s)	346
AcoI	YGGCCR	1 cut(s)	59
AcsI	RAATTY	4 cut(s)	46, 125, 453, 554
AfiI	CCNNNNNNNGG	4 cut(s)	109, 310, 335, 365
AflII	CTTAAG	1 cut(s)	398
AgsI	TTSAA	1 cut(s)	435
AjnI	CCWGG	1 cut(s)	191
AjuI	GAANNNNNNNTTGG	2 cut(s)	438, 470
AluBI	AGCT	3 cut(s)	230, 296, 397
AluI	AGCT	3 cut(s)	230, 296, 397
Alw26I	GTCTC	2 cut(s)	100, 226
AlwI	GGATC	1 cut(s)	346
AoxI	GGCC	5 cut(s)	59, 77, 194, 301, 338
ApoI	RAATTY	4 cut(s)	46, 125, 453, 554
AspS9I	GGNCC	3 cut(s)	286, 302, 338
AsuHPI	GGTGA	3 cut(s)	76, 380, 503
AsuII	TTCGAA	1 cut(s)	457
AvaII	GGWCC	1 cut(s)	286
BanII	GRGCYC	1 cut(s)	328
BccI	CCATC	6 cut(s)	29, 98, 211, 293, 363, 479
BciT130I	CCWGG	1 cut(s)	193
BciVI	GTATCC	1 cut(s)	229
BcoDI	GTCTC	2 cut(s)	100, 226
BfaI	CTAG	1 cut(s)	374
BfmI	CTRYAG	1 cut(s)	255
BfrI	CTTAAG	1 cut(s)	398
BfuI	GTATCC	1 cut(s)	229
BisI	GCNGC	1 cut(s)	346
BlsI	GCNGC	1 cut(s)	347
Bme1390I	CCNGG	1 cut(s)	193
Bme18I	GGWCC	1 cut(s)	286
BmgT120I	GGNCC	3 cut(s)	286, 302, 338
BmiI	GGNNCC	1 cut(s)	327
BmrFI	CCNGG	1 cut(s)	193
BmrI	ACTGGG	1 cut(s)	119
BmuI	ACTGGG	1 cut(s)	119
Bpu10I	CCTNAGC	1 cut(s)	231
Bpu14I	TTCGAA	1 cut(s)	457
BpuEI	CTTGAG	2 cut(s)	157, 210
BsaBI	GATNNNNATC	1 cut(s)	482
BsaJI	CCNNGG	1 cut(s)	329
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	4 cut(s)	109, 310, 335, 365
Bse118I	RCCGGY	3 cut(s)	61, 79, 212
Bse1I	ACTGG	3 cut(s)	114, 288, 359
Bse8I	GATNNNNATC	1 cut(s)	482
BseBI	CCWGG	1 cut(s)	193
BseDI	CCNNGG	1 cut(s)	329
BseGI	GGATG	2 cut(s)	355, 427
BseJI	GATNNNNATC	1 cut(s)	482
BseLI	CCNNNNNNNGG	4 cut(s)	109, 310, 335, 365
BseMII	CTCAG	1 cut(s)	245
BseNI	ACTGG	3 cut(s)	114, 288, 359
BseX3I	CGGCCG	1 cut(s)	59
BseYI	CCCAGC	1 cut(s)	389
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	5 cut(s)	61, 79, 196, 303, 340
BsiEI	CGRYCG	1 cut(s)	62
BsiSI	CCGG	6 cut(s)	58, 62, 80, 103, 122, 213
BslFI	GGGAC	1 cut(s)	449
BslI	CCNNNNNNNGG	4 cut(s)	109, 310, 335, 365
BsmAI	GTCTC	2 cut(s)	100, 226
BsmFI	GGGAC	1 cut(s)	449
BsnI	GGCC	5 cut(s)	61, 79, 196, 303, 340
Bsp119I	TTCGAA	1 cut(s)	457
Bsp1286I	GDGCHC	1 cut(s)	328
Bsp143I	GATC	1 cut(s)	351
Bsp19I	CCATGG	1 cut(s)	329
BspACI	CCGC	2 cut(s)	168, 346
BspANI	GGCC	5 cut(s)	61, 79, 196, 303, 340
BspCNI	CTCAG	1 cut(s)	244
BspHI	TCATGA	1 cut(s)	474
BspLI	GGNNCC	1 cut(s)	327
BspPI	GGATC	1 cut(s)	346
BspT104I	TTCGAA	1 cut(s)	457
BspTI	CTTAAG	1 cut(s)	398
BsrBI	CCGCTC	1 cut(s)	170
BsrFI	RCCGGY	3 cut(s)	61, 79, 212
BsrI	ACTGG	3 cut(s)	114, 288, 359
BssAI	RCCGGY	3 cut(s)	61, 79, 212
BssECI	CCNNGG	1 cut(s)	329
BssMI	GATC	1 cut(s)	351
BssT1I	CCWWGG	1 cut(s)	329
Bst2UI	CCWGG	1 cut(s)	193
Bst4CI	ACNGT	2 cut(s)	162, 259
BstAFI	CTTAAG	1 cut(s)	398
BstBI	TTCGAA	1 cut(s)	457
BstC8I	GCNNGC	3 cut(s)	81, 168, 214
BstDEI	CTNAG	1 cut(s)	231
BstDSI	CCRYGG	1 cut(s)	329
BstF5I	GGATG	2 cut(s)	355, 427
BstKTI	GATC	1 cut(s)	354
BstMAI	GTCTC	2 cut(s)	100, 226
BstMBI	GATC	1 cut(s)	351
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	1 cut(s)	193
BstSCI	CCNGG	1 cut(s)	191
BstSFI	CTRYAG	1 cut(s)	255
BstZI	CGGCCG	1 cut(s)	59
BsuI	GTATCC	1 cut(s)	229
BsuRI	GGCC	5 cut(s)	61, 79, 196, 303, 340
BtgI	CCRYGG	1 cut(s)	329
BtsCI	GGATG	2 cut(s)	355, 427
BtsIMutI	CAGTG	1 cut(s)	281
Cac8I	GCNNGC	3 cut(s)	81, 168, 214
CciI	TCATGA	1 cut(s)	474
Cfr10I	RCCGGY	3 cut(s)	61, 79, 212
Cfr13I	GGNCC	3 cut(s)	286, 302, 338
CseI	GACGC	1 cut(s)	512
CviAII	CATG	3 cut(s)	273, 330, 475
DdeI	CTNAG	1 cut(s)	231
DpnI	GATC	1 cut(s)	353
DpnII	GATC	1 cut(s)	351
EaeI	YGGCCR	1 cut(s)	59
EagI	CGGCCG	1 cut(s)	59
EclXI	CGGCCG	1 cut(s)	59
Eco130I	CCWWGG	1 cut(s)	329
Eco147I	AGGCCT	1 cut(s)	196
Eco24I	GRGCYC	1 cut(s)	328
Eco32I	GATATC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	286
Eco52I	CGGCCG	1 cut(s)	59
EcoRI	GAATTC	2 cut(s)	125, 453
EcoRII	CCWGG	1 cut(s)	191
EcoRV	GATATC	1 cut(s)	69
EcoT14I	CCWWGG	1 cut(s)	329
EcoT38I	GRGCYC	1 cut(s)	328
ErhI	CCWWGG	1 cut(s)	329
FaeI	CATG	3 cut(s)	276, 333, 478
FaiI	YATR	6 cut(s)	52, 274, 331, 387, 450, 476
FaqI	GGGAC	1 cut(s)	449
FatI	CATG	3 cut(s)	272, 329, 474
FauI	CCCGC	1 cut(s)	175
Fnu4HI	GCNGC	1 cut(s)	346
FokI	GGATG	2 cut(s)	342, 434
FriOI	GRGCYC	1 cut(s)	328
Fsp4HI	GCNGC	1 cut(s)	346
FspBI	CTAG	1 cut(s)	374
GluI	GCNGC	1 cut(s)	346
GsaI	CCCAGC	1 cut(s)	393
HaeIII	GGCC	5 cut(s)	61, 79, 196, 303, 340
HapII	CCGG	6 cut(s)	58, 62, 80, 103, 122, 213
HgaI	GACGC	1 cut(s)	512
Hin1II	CATG	3 cut(s)	276, 333, 478
HindIII	AAGCTT	1 cut(s)	395
HinfI	GANTC	1 cut(s)	17
HpaII	CCGG	6 cut(s)	58, 62, 80, 103, 122, 213
HphI	GGTGA	3 cut(s)	76, 380, 503
Hpy166II	GTNNAC	2 cut(s)	145, 371
Hpy188III	TCNNGA	3 cut(s)	233, 245, 475
Hpy8I	GTNNAC	2 cut(s)	145, 371
Hpy99I	CGWCG	2 cut(s)	10, 166
HpyAV	CCTTC	1 cut(s)	441
HpyCH4III	ACNGT	2 cut(s)	162, 259
HpyCH4V	TGCA	1 cut(s)	440
HpyF3I	CTNAG	1 cut(s)	231
Hsp92II	CATG	3 cut(s)	276, 333, 478
KroI	GCCGGC	2 cut(s)	79, 212
KroNI	GCCGGC	2 cut(s)	81, 214
Kzo9I	GATC	1 cut(s)	351
LmnI	GCTCC	2 cut(s)	175, 331
MaeI	CTAG	1 cut(s)	374
MaeIII	GTNAC	1 cut(s)	259
MalI	GATC	1 cut(s)	353
MbiI	CCGCTC	1 cut(s)	170
MboI	GATC	1 cut(s)	351
MboII	GAAGA	1 cut(s)	27
MfeI	CAATTG	1 cut(s)	435
MhlI	GDGCHC	1 cut(s)	328
MluCI	AATT	7 cut(s)	46, 125, 178, 435, 453, 510, 554
MlyI	GAGTC	1 cut(s)	11
MnlI	CCTC	3 cut(s)	132, 184, 299
MroNI	GCCGGC	2 cut(s)	79, 212
MseI	TTAA	3 cut(s)	399, 408, 413
MspCI	CTTAAG	1 cut(s)	398
MspI	CCGG	6 cut(s)	58, 62, 80, 103, 122, 213
MspR9I	CCNGG	1 cut(s)	193
MunI	CAATTG	1 cut(s)	435
MvaI	CCWGG	1 cut(s)	193
NaeI	GCCGGC	2 cut(s)	81, 214
NcoI	CCATGG	1 cut(s)	329
NdeII	GATC	1 cut(s)	351
NgoMIV	GCCGGC	2 cut(s)	79, 212
NlaIII	CATG	3 cut(s)	276, 333, 478
NlaIV	GGNNCC	1 cut(s)	327
NspV	TTCGAA	1 cut(s)	457
PagI	TCATGA	1 cut(s)	474
PceI	AGGCCT	1 cut(s)	196
PdiI	GCCGGC	2 cut(s)	81, 214
PflMI	CCANNNNNTGG	1 cut(s)	335
PkrI	GCNGC	1 cut(s)	347
PleI	GAGTC	1 cut(s)	11
PpsI	GAGTC	1 cut(s)	11
Psp6I	CCWGG	1 cut(s)	191
PspFI	CCCAGC	1 cut(s)	389
PspGI	CCWGG	1 cut(s)	191
PspN4I	GGNNCC	1 cut(s)	327
PspPI	GGNCC	3 cut(s)	286, 302, 338
SaqAI	TTAA	3 cut(s)	399, 408, 413
SatI	GCNGC	1 cut(s)	346
Sau3AI	GATC	1 cut(s)	351
Sau96I	GGNCC	3 cut(s)	286, 302, 338
SchI	GAGTC	1 cut(s)	11
ScrFI	CCNGG	1 cut(s)	193
SduI	GDGCHC	1 cut(s)	328
SetI	ASST	4 cut(s)	232, 298, 370, 399
SfcI	CTRYAG	1 cut(s)	255
SfuI	TTCGAA	1 cut(s)	457
SinI	GGWCC	1 cut(s)	286
SmlI	CTYRAG	3 cut(s)	136, 225, 398
SmoI	CTYRAG	3 cut(s)	136, 225, 398
Sse9I	AATT	7 cut(s)	46, 125, 178, 435, 453, 510, 554
SseBI	AGGCCT	1 cut(s)	196
SsiI	CCGC	2 cut(s)	168, 346
SspMI	CTAG	1 cut(s)	374
StuI	AGGCCT	1 cut(s)	196
StyD4I	CCNGG	1 cut(s)	191
StyI	CCWWGG	1 cut(s)	329
TaaI	ACNGT	2 cut(s)	162, 259
TaqI	TCGA	2 cut(s)	246, 457
TasI	AATT	7 cut(s)	46, 125, 178, 435, 453, 510, 554
TauI	GCSGC	1 cut(s)	348
Tru1I	TTAA	3 cut(s)	399, 408, 413
Tru9I	TTAA	3 cut(s)	399, 408, 413
TscAI	CASTG	1 cut(s)	288
TspDTI	ATGAA	2 cut(s)	39, 472
TspGWI	ACGGA	2 cut(s)	278, 434
TspRI	CASTG	1 cut(s)	288
Van91I	CCANNNNNTGG	1 cut(s)	335
Vha464I	CTTAAG	1 cut(s)	398
VpaK11BI	GGWCC	1 cut(s)	286
XapI	RAATTY	4 cut(s)	46, 125, 453, 554
XspI	CTAG	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.