ATP synthase subunit epsilon
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51650 |
| fragaria_vesca | FvH4_6g37330 FvH4_6g37330 |
| malus_domestica | MD09G1158500.v1.1 |
| prunus_persica | Prupe.3G167500_v2.0.a1 Prupe.3G167500_v2.0.a1 |
| pyrus_communis | pycom09g07710 pycom17g13760 |
| rosa_chinensis | RchiOBHm_Chr2g0150171 |
| rosa_multiflora | Rmu_sc0015510.1_g000002 Rmu_ssc0000020.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00097380 |
| rosa_rugosa | Rorug02G0419500 |
| rosa_samantha | Rh2AG478600 Rh2CG464800 |
| rosa_wichuraiana | Rw2G039060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 19 |
| AccII | CGCG | 1 cut(s) | 129 |
| AciI | CCGC | 2 cut(s) | 17, 35 |
| AcoI | YGGCCR | 1 cut(s) | 36 |
| AcuI | CTGAAG | 1 cut(s) | 135 |
| AcyI | GRCGYC | 2 cut(s) | 5, 179 |
| AfaI | GTAC | 2 cut(s) | 138, 193 |
| Alw26I | GTCTC | 2 cut(s) | 154, 170 |
| AoxI | GGCC | 1 cut(s) | 36 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| AspS9I | GGNCC | 1 cut(s) | 159 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 159 |
| BanI | GGYRCC | 1 cut(s) | 19 |
| BbvI | GCAGC | 1 cut(s) | 26 |
| BccI | CCATC | 1 cut(s) | 158 |
| BceAI | ACGGC | 2 cut(s) | 7, 131 |
| BcoDI | GTCTC | 2 cut(s) | 154, 170 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 28 |
| BisI | GCNGC | 2 cut(s) | 15, 36 |
| BlsI | GCNGC | 2 cut(s) | 16, 37 |
| Bme18I | GGWCC | 1 cut(s) | 159 |
| BmgT120I | GGNCC | 1 cut(s) | 159 |
| BmiI | GGNNCC | 2 cut(s) | 21, 102 |
| BpuEI | CTTGAG | 1 cut(s) | 80 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 179 |
| Bse118I | RCCGGY | 1 cut(s) | 38 |
| BseMII | CTCAG | 1 cut(s) | 165 |
| BseX3I | CGGCCG | 1 cut(s) | 36 |
| BseXI | GCAGC | 1 cut(s) | 26 |
| Bsh1236I | CGCG | 1 cut(s) | 129 |
| Bsh1285I | CGRYCG | 1 cut(s) | 39 |
| BshFI | GGCC | 1 cut(s) | 38 |
| BshNI | GGYRCC | 1 cut(s) | 19 |
| BsiEI | CGRYCG | 1 cut(s) | 39 |
| BsiSI | CCGG | 1 cut(s) | 39 |
| BsiWI | CGTACG | 1 cut(s) | 191 |
| BsmAI | GTCTC | 2 cut(s) | 154, 170 |
| BsmBI | CGTCTC | 2 cut(s) | 154, 170 |
| BsnI | GGCC | 1 cut(s) | 38 |
| Bsp68I | TCGCGA | 1 cut(s) | 129 |
| BspACI | CCGC | 2 cut(s) | 17, 35 |
| BspANI | GGCC | 1 cut(s) | 38 |
| BspCNI | CTCAG | 1 cut(s) | 166 |
| BspFNI | CGCG | 1 cut(s) | 129 |
| BspLI | GGNNCC | 2 cut(s) | 21, 102 |
| BspT107I | GGYRCC | 1 cut(s) | 19 |
| BsrFI | RCCGGY | 1 cut(s) | 38 |
| BssAI | RCCGGY | 1 cut(s) | 38 |
| BssNI | GRCGYC | 2 cut(s) | 5, 179 |
| BstACI | GRCGYC | 2 cut(s) | 5, 179 |
| BstC8I | GCNNGC | 2 cut(s) | 33, 170 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstFNI | CGCG | 1 cut(s) | 129 |
| BstMAI | GTCTC | 2 cut(s) | 154, 170 |
| BstMCI | CGRYCG | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 28, 178 |
| BstUI | CGCG | 1 cut(s) | 129 |
| BstV1I | GCAGC | 1 cut(s) | 26 |
| BstZI | CGGCCG | 1 cut(s) | 36 |
| BsuRI | GGCC | 1 cut(s) | 38 |
| BtuMI | TCGCGA | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 2 cut(s) | 33, 170 |
| Cfr10I | RCCGGY | 1 cut(s) | 38 |
| Cfr13I | GGNCC | 1 cut(s) | 159 |
| CseI | GACGC | 1 cut(s) | 187 |
| Csp6I | GTAC | 2 cut(s) | 137, 192 |
| CviJI | RGCY | 3 cut(s) | 38, 103, 172 |
| CviKI_1 | RGCY | 3 cut(s) | 38, 103, 172 |
| CviQI | GTAC | 2 cut(s) | 137, 192 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| EaeI | YGGCCR | 1 cut(s) | 36 |
| EagI | CGGCCG | 1 cut(s) | 36 |
| EclXI | CGGCCG | 1 cut(s) | 36 |
| Eco47I | GGWCC | 1 cut(s) | 159 |
| Eco52I | CGGCCG | 1 cut(s) | 36 |
| Eco57I | CTGAAG | 1 cut(s) | 135 |
| Esp3I | CGTCTC | 2 cut(s) | 154, 170 |
| FaiI | YATR | 2 cut(s) | 44, 211 |
| Fnu4HI | GCNGC | 2 cut(s) | 15, 36 |
| Fsp4HI | GCNGC | 2 cut(s) | 15, 36 |
| GluI | GCNGC | 2 cut(s) | 15, 36 |
| HaeIII | GGCC | 1 cut(s) | 38 |
| HapII | CCGG | 1 cut(s) | 39 |
| HgaI | GACGC | 1 cut(s) | 187 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 179 |
| HinfI | GANTC | 1 cut(s) | 76 |
| HpaII | CCGG | 1 cut(s) | 39 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy166II | GTNNAC | 2 cut(s) | 139, 159 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 2 cut(s) | 139, 159 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 28, 178 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 179 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 52, 65, 186 |
| Lsp1109I | GCAGC | 1 cut(s) | 26 |
| MluCI | AATT | 1 cut(s) | 88 |
| MnlI | CCTC | 2 cut(s) | 104, 126 |
| MspA1I | CMGCKG | 1 cut(s) | 17 |
| MspI | CCGG | 1 cut(s) | 39 |
| MvnI | CGCG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 28, 178 |
| NlaIV | GGNNCC | 2 cut(s) | 21, 102 |
| NruI | TCGCGA | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 76 |
| Pfl23II | CGTACG | 1 cut(s) | 191 |
| PkrI | GCNGC | 2 cut(s) | 16, 37 |
| PspLI | CGTACG | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 2 cut(s) | 21, 102 |
| PspPI | GGNCC | 1 cut(s) | 159 |
| RruI | TCGCGA | 1 cut(s) | 129 |
| RsaI | GTAC | 2 cut(s) | 138, 193 |
| RsaNI | GTAC | 2 cut(s) | 137, 192 |
| SatI | GCNGC | 2 cut(s) | 15, 36 |
| Sau96I | GGNCC | 1 cut(s) | 159 |
| SetI | ASST | 2 cut(s) | 59, 205 |
| SinI | GGWCC | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 95 |
| SmoI | CTYRAG | 1 cut(s) | 95 |
| Sse9I | AATT | 1 cut(s) | 88 |
| SsiI | CCGC | 2 cut(s) | 17, 35 |
| TaqI | TCGA | 1 cut(s) | 8 |
| TaqII | GACCGA | 1 cut(s) | 176 |
| TasI | AATT | 1 cut(s) | 88 |
| TauI | GCSGC | 1 cut(s) | 38 |
| TfiI | GAWTC | 1 cut(s) | 76 |
| TseI | GCWGC | 1 cut(s) | 14 |
| TspGWI | ACGGA | 2 cut(s) | 179, 209 |
| VpaK11BI | GGWCC | 1 cut(s) | 159 |