Prupe.3G202800_v2.0.a1

N-acetyltransferase 9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0011423
Physical Location & Seq
Forward (+)
21062567 .. 21065193
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G202800.1

Sequence Viewer

Length: 609 bp
ATGGAGCAAGAGAAAGAGAAAGATAGAGTGAGCTTGGAAGGAGGGAGAGTGATACTGCTGCCTTACATGAAAGAACACGTTCCAAAGTACCATGAGTGGATGCAAGACCCAGCTCTTCTCCAAGCCACTGGCTCTGAGCCCCTCACCCTCGACCAGGAGTACCAGATGCAGCTCACCTGGACCCAAGACCCCAACAAGCAGACTTTTATTGTATTGGATAAGCAGTTGGTTGTGGGAGAATTCAACCATGGACAGCCCCATGTGGAAGCCATGGTAGGTGATGTGAATTTATATATGAATGACCTGGATGATCCTCAAATGGCAGAGATTGAAATAATGATTGCTGAGCCAAAAAGTCGTGGTAAAGGACTTGGGAAGGAGTCTGCCTTGATGATGATGGCCTTTGCAGTTGAGAATCTGGGGATCCACATCTTCCGTGCTAAAATTGGAGAGCTAAATGGAGCATCTCTTAACTTGTTCCGGAAATTGGGCTTTGAGGAGACTTCTTATAGTGAAATCTTCAAAGAGGTAACATTGGAGTTATCTGTAACAAAGGCCAAGCATGATGAGCTGCTGCAGTTGATGGGTAGTTTCATTACACATGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

203

Amino Acids

22.98

Weight (kDa)

4.94

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011423)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04845 AT2G04845 AT2G04845 AT2G04845 AT2G04845
fragaria_vesca FvH4_6g41300 FvH4_6g41300
malus_domestica MD09G1120700.v1.1
prunus_persica Prupe.3G202800_v2.0.a1
pyrus_communis pycom09g04530 pycom17g10360
rosa_chinensis RchiOBHm_Chr2g0156861
rosa_laevigata RLG00000020947
rosa_multiflora Rmu_sc0009209.1_g000001 Rmu_ssc0000286.1_g000025
rosa_roxburghii Rroxscaffold_2G00092650
rosa_rugosa Rorug02G0456700
rosa_samantha Rh2AG522300 Rh2CG507200
rosa_wichuraiana Rw2G043130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 480
AclWI GGATC 3 cut(s) 305, 418, 431
AcsI RAATTY 2 cut(s) 239, 286
AfaI GTAC 2 cut(s) 89, 161
AfiI CCNNNNNNNGG 2 cut(s) 154, 487
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 3 cut(s) 244, 332, 523
AjnI CCWGG 3 cut(s) 153, 176, 303
AluBI AGCT 5 cut(s) 33, 113, 172, 454, 571
AluI AGCT 5 cut(s) 33, 113, 172, 454, 571
Alw26I GTCTC 1 cut(s) 494
AlwI GGATC 3 cut(s) 305, 418, 431
Aor13HI TCCGGA 1 cut(s) 480
AoxI GGCC 2 cut(s) 399, 555
ApeKI GCWGC 4 cut(s) 58, 169, 571, 574
ApoI RAATTY 2 cut(s) 239, 286
Asp700I GAANNNNTTC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 180
AsuHPI GGTGA 3 cut(s) 136, 166, 290
AvaII GGWCC 1 cut(s) 180
BamHI GGATCC 1 cut(s) 423
BanII GRGCYC 1 cut(s) 141
BbvI GCAGC 4 cut(s) 45, 181, 558, 561
BccI CCATC 2 cut(s) 391, 577
BciT130I CCWGG 3 cut(s) 155, 178, 305
BcoDI GTCTC 1 cut(s) 494
BfaI CTAG 1 cut(s) 607
BfmI CTRYAG 1 cut(s) 575
BisI GCNGC 4 cut(s) 59, 170, 572, 575
BlpI GCTNAGC 1 cut(s) 345
BlsI GCNGC 4 cut(s) 60, 171, 573, 576
Bme1390I CCNGG 3 cut(s) 155, 178, 305
Bme18I GGWCC 1 cut(s) 180
BmgT120I GGNCC 1 cut(s) 180
BmiI GGNNCC 2 cut(s) 182, 425
BmrFI CCNGG 3 cut(s) 155, 178, 305
BmsI GCATC 3 cut(s) 90, 156, 473
Bpu1102I GCTNAGC 1 cut(s) 345
BsaBI GATNNNNATC 1 cut(s) 428
BsaJI CCNNGG 2 cut(s) 247, 270
BsaWI WCCGGW 1 cut(s) 480
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 487
Bse1I ACTGG 1 cut(s) 133
Bse8I GATNNNNATC 1 cut(s) 428
BseAI TCCGGA 1 cut(s) 480
BseBI CCWGG 3 cut(s) 155, 178, 305
BseDI CCNNGG 2 cut(s) 247, 270
BseGI GGATG 2 cut(s) 105, 313
BseJI GATNNNNATC 1 cut(s) 428
BseLI CCNNNNNNNGG 2 cut(s) 154, 487
BseMII CTCAG 2 cut(s) 126, 336
BseNI ACTGG 1 cut(s) 133
BseRI GAGGAG 1 cut(s) 512
BseXI GCAGC 4 cut(s) 45, 181, 558, 561
BseYI CCCAGC 1 cut(s) 109
BshFI GGCC 2 cut(s) 401, 557
BsiSI CCGG 1 cut(s) 481
BslI CCNNNNNNNGG 2 cut(s) 154, 487
BsmAI GTCTC 1 cut(s) 494
BsnI GGCC 2 cut(s) 401, 557
Bsp1286I GDGCHC 1 cut(s) 141
Bsp13I TCCGGA 1 cut(s) 480
Bsp143I GATC 2 cut(s) 310, 423
Bsp1720I GCTNAGC 1 cut(s) 345
Bsp19I CCATGG 2 cut(s) 247, 270
BspANI GGCC 2 cut(s) 401, 557
BspCNI CTCAG 2 cut(s) 127, 337
BspEI TCCGGA 1 cut(s) 480
BspLI GGNNCC 2 cut(s) 182, 425
BspMAI CTGCAG 1 cut(s) 579
BspPI GGATC 3 cut(s) 305, 418, 431
BspQI GCTCTTC 1 cut(s) 120
BsrI ACTGG 1 cut(s) 133
BssECI CCNNGG 2 cut(s) 247, 270
BssMI GATC 2 cut(s) 310, 423
BssT1I CCWWGG 2 cut(s) 247, 270
Bst2UI CCWGG 3 cut(s) 155, 178, 305
Bst6I CTCTTC 1 cut(s) 120
BstDEI CTNAG 2 cut(s) 135, 345
BstDSI CCRYGG 2 cut(s) 247, 270
BstENI CCTNNNNNAGG 1 cut(s) 152
BstF5I GGATG 2 cut(s) 105, 313
BstKTI GATC 2 cut(s) 313, 426
BstMAI GTCTC 1 cut(s) 494
BstMBI GATC 2 cut(s) 310, 423
BstMWI GCNNNNNNNGC 1 cut(s) 568
BstNI CCWGG 3 cut(s) 155, 178, 305
BstNSI RCATGY 1 cut(s) 605
BstSCI CCNGG 3 cut(s) 153, 176, 303
BstSFI CTRYAG 1 cut(s) 575
BstV1I GCAGC 4 cut(s) 45, 181, 558, 561
BstX2I RGATCY 1 cut(s) 423
BstXI CCANNNNNNTGG 1 cut(s) 128
BstYI RGATCY 1 cut(s) 423
BsuRI GGCC 2 cut(s) 401, 557
BtgI CCRYGG 2 cut(s) 247, 270
BtsCI GGATG 2 cut(s) 105, 313
BtsIMutI CAGTG 1 cut(s) 126
Cfr13I GGNCC 1 cut(s) 180
Csp6I GTAC 2 cut(s) 88, 160
CviAII CATG 7 cut(s) 67, 92, 248, 260, 271, 563, 602
CviQI GTAC 2 cut(s) 88, 160
DdeI CTNAG 2 cut(s) 135, 345
DpnI GATC 2 cut(s) 312, 425
DpnII GATC 2 cut(s) 310, 423
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 247, 270
Eco24I GRGCYC 1 cut(s) 141
Eco47I GGWCC 1 cut(s) 180
EcoNI CCTNNNNNAGG 1 cut(s) 152
EcoRI GAATTC 1 cut(s) 239
EcoRII CCWGG 3 cut(s) 153, 176, 303
EcoT14I CCWWGG 2 cut(s) 247, 270
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 2 cut(s) 247, 270
FaeI CATG 7 cut(s) 70, 95, 251, 263, 274, 566, 605
FatI CATG 7 cut(s) 66, 91, 247, 259, 270, 562, 601
Fnu4HI GCNGC 4 cut(s) 59, 170, 572, 575
FokI GGATG 2 cut(s) 112, 320
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 4 cut(s) 59, 170, 572, 575
FspBI CTAG 1 cut(s) 607
GluI GCNGC 4 cut(s) 59, 170, 572, 575
GsaI CCCAGC 1 cut(s) 113
HaeIII GGCC 2 cut(s) 401, 557
HapII CCGG 1 cut(s) 481
Hin1II CATG 7 cut(s) 70, 95, 251, 263, 274, 566, 605
HinfI GANTC 2 cut(s) 380, 415
HpaII CCGG 1 cut(s) 481
HphI GGTGA 3 cut(s) 136, 166, 290
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 1 cut(s) 481
HpyAV CCTTC 2 cut(s) 32, 370
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 4 cut(s) 103, 169, 407, 577
HpyF10VI GCNNNNNNNGC 1 cut(s) 568
HpyF3I CTNAG 2 cut(s) 135, 345
HpySE526I ACGT 1 cut(s) 78
Hsp92II CATG 7 cut(s) 70, 95, 251, 263, 274, 566, 605
Kpn2I TCCGGA 1 cut(s) 480
Kzo9I GATC 2 cut(s) 310, 423
LguI GCTCTTC 1 cut(s) 120
LmnI GCTCC 2 cut(s) 4, 461
Lsp1109I GCAGC 4 cut(s) 45, 181, 558, 561
LweI GCATC 3 cut(s) 90, 156, 473
MaeI CTAG 1 cut(s) 607
MaeII ACGT 1 cut(s) 78
MaeIII GTNAC 2 cut(s) 529, 547
MalI GATC 2 cut(s) 312, 425
MboI GATC 2 cut(s) 310, 423
MboII GAAGA 3 cut(s) 107, 424, 511
MflI RGATCY 1 cut(s) 423
MhlI GDGCHC 1 cut(s) 141
MluCI AATT 4 cut(s) 239, 286, 444, 485
MlyI GAGTC 1 cut(s) 389
MnlI CCTC 6 cut(s) 35, 152, 158, 324, 490, 520
MroI TCCGGA 1 cut(s) 480
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 1 cut(s) 471
MspI CCGG 1 cut(s) 481
MspR9I CCNGG 3 cut(s) 155, 178, 305
MvaI CCWGG 3 cut(s) 155, 178, 305
MwoI GCNNNNNNNGC 1 cut(s) 568
NcoI CCATGG 2 cut(s) 247, 270
NdeII GATC 2 cut(s) 310, 423
NlaIII CATG 7 cut(s) 70, 95, 251, 263, 274, 566, 605
NlaIV GGNNCC 2 cut(s) 182, 425
NspI RCATGY 1 cut(s) 605
PciSI GCTCTTC 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 1 cut(s) 415
PkrI GCNGC 4 cut(s) 60, 171, 573, 576
PleI GAGTC 1 cut(s) 388
PpsI GAGTC 1 cut(s) 388
Psp6I CCWGG 3 cut(s) 153, 176, 303
PspFI CCCAGC 1 cut(s) 109
PspGI CCWGG 3 cut(s) 153, 176, 303
PspN4I GGNNCC 2 cut(s) 182, 425
PspPI GGNCC 1 cut(s) 180
PstI CTGCAG 1 cut(s) 579
PsuI RGATCY 1 cut(s) 423
RsaI GTAC 2 cut(s) 89, 161
RsaNI GTAC 2 cut(s) 88, 160
SapI GCTCTTC 1 cut(s) 120
SaqAI TTAA 1 cut(s) 471
SatI GCNGC 4 cut(s) 59, 170, 572, 575
Sau3AI GATC 2 cut(s) 310, 423
Sau96I GGNCC 1 cut(s) 180
SchI GAGTC 1 cut(s) 389
ScrFI CCNGG 3 cut(s) 155, 178, 305
SduI GDGCHC 1 cut(s) 141
SfaNI GCATC 3 cut(s) 90, 156, 473
SfcI CTRYAG 1 cut(s) 575
SinI GGWCC 1 cut(s) 180
Sse9I AATT 4 cut(s) 239, 286, 444, 485
SspMI CTAG 1 cut(s) 607
StyD4I CCNGG 3 cut(s) 153, 176, 303
StyI CCWWGG 2 cut(s) 247, 270
TaiI ACGT 1 cut(s) 81
TaqI TCGA 1 cut(s) 150
TasI AATT 4 cut(s) 239, 286, 444, 485
TfiI GAWTC 1 cut(s) 415
Tru1I TTAA 1 cut(s) 471
Tru9I TTAA 1 cut(s) 471
TscAI CASTG 1 cut(s) 133
TseI GCWGC 4 cut(s) 58, 169, 571, 574
TspDTI ATGAA 3 cut(s) 83, 311, 583
TspGWI ACGGA 1 cut(s) 425
TspRI CASTG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 180
XagI CCTNNNNNAGG 1 cut(s) 152
XapI RAATTY 2 cut(s) 239, 286
XceI RCATGY 1 cut(s) 605
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.