Leucine-rich repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G03260 AT4G03260 AT4G03260 AT4G03260 |
| fragaria_vesca | FvH4_6g44290 FvH4_6g44290 FvH4_6g44290 FvH4_6g44290 |
| malus_domestica | MD09G1099100.v1.1 MD17G1087400.v1.1 |
| prunus_persica | Prupe.3G227100_v2.0.a1 |
| pyrus_communis | pycom09g02280 pycom17g08460 |
| rosa_chinensis | RchiOBHm_Chr2g0161151 |
| rosa_laevigata | RLG00000021262 |
| rosa_multiflora | Rmu_sc0006420.1_g000038 |
| rosa_roxburghii | Rroxscaffold_2G00089080 |
| rosa_rugosa | Rorug02G0486500 Rorug02G0486600 |
| rosa_samantha | Rh2AG553300 Rh2BG567000 Rh2CG537100 Rh2DG576300 |
| rosa_wichuraiana | Rw2G045760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 293 |
| Acc16I | TGCGCA | 1 cut(s) | 2042 |
| AccB1I | GGYRCC | 2 cut(s) | 418, 1941 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 593 |
| AccI | GTMKAC | 1 cut(s) | 1981 |
| AciI | CCGC | 2 cut(s) | 1783, 1913 |
| AclWI | GGATC | 3 cut(s) | 408, 1249, 1569 |
| AcoI | YGGCCR | 1 cut(s) | 1888 |
| AcsI | RAATTY | 6 cut(s) | 124, 168, 378, 574, 801, 1306 |
| AcuI | CTGAAG | 6 cut(s) | 51, 347, 1034, 1304, 1778, 1937 |
| AcyI | GRCGYC | 1 cut(s) | 354 |
| AdeI | CACNNNGTG | 1 cut(s) | 632 |
| AfaI | GTAC | 3 cut(s) | 498, 945, 1496 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 593, 1317, 1955, 2026, 2043 |
| AgsI | TTSAA | 9 cut(s) | 62, 74, 121, 212, 735, 863, 983, 1360, 1687 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1418, 1977 |
| AhlI | ACTAGT | 1 cut(s) | 1246 |
| AjiI | CACGTC | 1 cut(s) | 31 |
| AjnI | CCWGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| Alw21I | GWGCWC | 2 cut(s) | 637, 1336 |
| Alw26I | GTCTC | 3 cut(s) | 359, 1107, 1668 |
| Alw44I | GTGCAC | 1 cut(s) | 633 |
| AlwI | GGATC | 3 cut(s) | 408, 1249, 1569 |
| AoxI | GGCC | 5 cut(s) | 565, 1462, 1816, 1874, 1888 |
| ApaLI | GTGCAC | 1 cut(s) | 633 |
| ApoI | RAATTY | 6 cut(s) | 124, 168, 378, 574, 801, 1306 |
| AspA2I | CCTAGG | 1 cut(s) | 1597 |
| AspLEI | GCGC | 3 cut(s) | 288, 1026, 2043 |
| AspS9I | GGNCC | 5 cut(s) | 566, 748, 1426, 1776, 2029 |
| AsuHPI | GGTGA | 4 cut(s) | 242, 629, 1117, 1220 |
| AsuNHI | GCTAGC | 1 cut(s) | 1850 |
| AvaII | GGWCC | 4 cut(s) | 748, 1426, 1776, 2029 |
| AvrII | CCTAGG | 1 cut(s) | 1597 |
| AxyI | CCTNAGG | 1 cut(s) | 760 |
| BaeGI | GKGCMC | 2 cut(s) | 637, 1944 |
| BanI | GGYRCC | 2 cut(s) | 418, 1941 |
| BanII | GRGCYC | 1 cut(s) | 1933 |
| BauI | CACGAG | 1 cut(s) | 630 |
| BbsI | GAAGAC | 1 cut(s) | 1523 |
| Bbv12I | GWGCWC | 2 cut(s) | 637, 1336 |
| BccI | CCATC | 6 cut(s) | 383, 419, 598, 872, 1643, 1885 |
| BceAI | ACGGC | 1 cut(s) | 1903 |
| BciT130I | CCWGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| BclI | TGATCA | 2 cut(s) | 370, 1099 |
| BcoDI | GTCTC | 3 cut(s) | 359, 1107, 1668 |
| BcuI | ACTAGT | 1 cut(s) | 1246 |
| BfaI | CTAG | 6 cut(s) | 308, 1247, 1341, 1466, 1598, 1851 |
| BfmI | CTRYAG | 3 cut(s) | 933, 1767, 1905 |
| BglII | AGATCT | 1 cut(s) | 737 |
| BlnI | CCTAGG | 1 cut(s) | 1597 |
| Bme1390I | CCNGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| Bme18I | GGWCC | 4 cut(s) | 748, 1426, 1776, 2029 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1418, 1977 |
| BmgBI | CACGTC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 5 cut(s) | 566, 748, 1426, 1776, 2029 |
| BmiI | GGNNCC | 3 cut(s) | 420, 1839, 1943 |
| BmrFI | CCNGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| BmrI | ACTGGG | 1 cut(s) | 1947 |
| BmsI | GCATC | 3 cut(s) | 1144, 1753, 1976 |
| BmtI | GCTAGC | 1 cut(s) | 1854 |
| BmuI | ACTGGG | 1 cut(s) | 1947 |
| BoxI | GACNNNNGTC | 1 cut(s) | 489 |
| BpiI | GAAGAC | 1 cut(s) | 1523 |
| BpmI | CTGGAG | 1 cut(s) | 615 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1158, 1430 |
| BpuEI | CTTGAG | 2 cut(s) | 159, 251 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1195 |
| BsaHI | GRCGYC | 1 cut(s) | 354 |
| BsaJI | CCNNGG | 8 cut(s) | 357, 696, 964, 1597, 1841, 1855, 1891, 1926 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1607, 1637 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 593, 1317, 1955, 2026, 2043 |
| Bse118I | RCCGGY | 1 cut(s) | 1731 |
| Bse1I | ACTGG | 4 cut(s) | 725, 923, 1804, 1953 |
| Bse21I | CCTNAGG | 1 cut(s) | 760 |
| Bse3DI | GCAATG | 2 cut(s) | 34, 84 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1195 |
| BseBI | CCWGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| BseDI | CCNNGG | 8 cut(s) | 357, 696, 964, 1597, 1841, 1855, 1891, 1926 |
| BseGI | GGATG | 4 cut(s) | 367, 829, 1159, 1768 |
| BseJI | GATNNNNATC | 1 cut(s) | 1195 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 593, 1317, 1955, 2026, 2043 |
| BseMI | GCAATG | 2 cut(s) | 34, 84 |
| BseMII | CTCAG | 7 cut(s) | 290, 410, 735, 837, 990, 1421, 1673 |
| BseNI | ACTGG | 4 cut(s) | 725, 923, 1804, 1953 |
| BseRI | GAGGAG | 1 cut(s) | 456 |
| BseSI | GKGCMC | 2 cut(s) | 637, 1944 |
| BseYI | CCCAGC | 1 cut(s) | 1654 |
| BsgI | GTGCAG | 1 cut(s) | 1230 |
| BshFI | GGCC | 5 cut(s) | 567, 1464, 1818, 1876, 1890 |
| BshNI | GGYRCC | 2 cut(s) | 418, 1941 |
| BsiHKAI | GWGCWC | 2 cut(s) | 637, 1336 |
| BsiSI | CCGG | 1 cut(s) | 1732 |
| BslFI | GGGAC | 1 cut(s) | 449 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 593, 1317, 1955, 2026, 2043 |
| BsmAI | GTCTC | 3 cut(s) | 359, 1107, 1668 |
| BsmBI | CGTCTC | 1 cut(s) | 1668 |
| BsmFI | GGGAC | 1 cut(s) | 449 |
| BsmI | GAATGC | 2 cut(s) | 703, 730 |
| BsnI | GGCC | 5 cut(s) | 567, 1464, 1818, 1876, 1890 |
| Bsp1286I | GDGCHC | 4 cut(s) | 637, 1336, 1933, 1944 |
| Bsp19I | CCATGG | 1 cut(s) | 1891 |
| BspACI | CCGC | 2 cut(s) | 1783, 1913 |
| BspANI | GGCC | 5 cut(s) | 567, 1464, 1818, 1876, 1890 |
| BspCNI | CTCAG | 7 cut(s) | 289, 409, 736, 838, 989, 1422, 1672 |
| BspHI | TCATGA | 1 cut(s) | 790 |
| BspLI | GGNNCC | 3 cut(s) | 420, 1839, 1943 |
| BspMAI | CTGCAG | 1 cut(s) | 1771 |
| BspOI | GCTAGC | 1 cut(s) | 1854 |
| BspPI | GGATC | 3 cut(s) | 408, 1249, 1569 |
| BspQI | GCTCTTC | 1 cut(s) | 1341 |
| BspT107I | GGYRCC | 2 cut(s) | 418, 1941 |
| BsrDI | GCAATG | 2 cut(s) | 34, 84 |
| BsrFI | RCCGGY | 1 cut(s) | 1731 |
| BsrI | ACTGG | 4 cut(s) | 725, 923, 1804, 1953 |
| BssAI | RCCGGY | 1 cut(s) | 1731 |
| BssECI | CCNNGG | 8 cut(s) | 357, 696, 964, 1597, 1841, 1855, 1891, 1926 |
| BssNI | GRCGYC | 1 cut(s) | 354 |
| BssSI | CACGAG | 1 cut(s) | 630 |
| BssT1I | CCWWGG | 4 cut(s) | 964, 1597, 1841, 1891 |
| Bst2BI | CACGAG | 1 cut(s) | 630 |
| Bst2UI | CCWGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| Bst4CI | ACNGT | 4 cut(s) | 719, 854, 1555, 1859 |
| Bst6I | CTCTTC | 3 cut(s) | 63, 1103, 1341 |
| BstACI | GRCGYC | 1 cut(s) | 354 |
| BstC8I | GCNNGC | 4 cut(s) | 930, 1608, 1632, 1852 |
| BstDSI | CCRYGG | 2 cut(s) | 1855, 1891 |
| BstEII | GGTNACC | 1 cut(s) | 617 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2024 |
| BstF5I | GGATG | 4 cut(s) | 367, 829, 1159, 1768 |
| BstHHI | GCGC | 3 cut(s) | 288, 1026, 2043 |
| BstMAI | GTCTC | 3 cut(s) | 359, 1107, 1668 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 141, 1223, 1232 |
| BstNI | CCWGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| BstNSI | RCATGY | 2 cut(s) | 200, 758 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 489 |
| BstPI | GGTNACC | 1 cut(s) | 617 |
| BstSCI | CCNGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| BstSFI | CTRYAG | 3 cut(s) | 933, 1767, 1905 |
| BstSLI | GKGCMC | 2 cut(s) | 637, 1944 |
| BstV2I | GAAGAC | 1 cut(s) | 1523 |
| BstX2I | RGATCY | 2 cut(s) | 737, 1561 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1642 |
| BstYI | RGATCY | 2 cut(s) | 737, 1561 |
| Bsu36I | CCTNAGG | 1 cut(s) | 760 |
| BsuRI | GGCC | 5 cut(s) | 567, 1464, 1818, 1876, 1890 |
| BtgI | CCRYGG | 2 cut(s) | 1855, 1891 |
| BtgZI | GCGATG | 1 cut(s) | 1520 |
| BtrI | CACGTC | 1 cut(s) | 31 |
| BtsCI | GGATG | 4 cut(s) | 367, 829, 1159, 1768 |
| BtsIMutI | CAGTG | 4 cut(s) | 682, 732, 1522, 1960 |
| Cac8I | GCNNGC | 4 cut(s) | 930, 1608, 1632, 1852 |
| CciI | TCATGA | 1 cut(s) | 790 |
| CfoI | GCGC | 3 cut(s) | 288, 1026, 2043 |
| Cfr10I | RCCGGY | 1 cut(s) | 1731 |
| Cfr13I | GGNCC | 5 cut(s) | 566, 748, 1426, 1776, 2029 |
| CpoI | CGGWCCG | 1 cut(s) | 1776 |
| CseI | GACGC | 1 cut(s) | 362 |
| Csp6I | GTAC | 3 cut(s) | 497, 944, 1495 |
| CspI | CGGWCCG | 1 cut(s) | 1776 |
| CviQI | GTAC | 3 cut(s) | 497, 944, 1495 |
| DraI | TTTAAA | 1 cut(s) | 192 |
| DraIII | CACNNNGTG | 1 cut(s) | 632 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1418, 1977 |
| EaeI | YGGCCR | 1 cut(s) | 1888 |
| Eam1104I | CTCTTC | 3 cut(s) | 63, 1103, 1341 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1418, 1977 |
| EarI | CTCTTC | 3 cut(s) | 63, 1103, 1341 |
| Eco130I | CCWWGG | 4 cut(s) | 964, 1597, 1841, 1891 |
| Eco24I | GRGCYC | 1 cut(s) | 1933 |
| Eco32I | GATATC | 1 cut(s) | 832 |
| Eco47I | GGWCC | 4 cut(s) | 748, 1426, 1776, 2029 |
| Eco57I | CTGAAG | 6 cut(s) | 51, 347, 1034, 1304, 1778, 1937 |
| Eco81I | CCTNAGG | 1 cut(s) | 760 |
| Eco91I | GGTNACC | 1 cut(s) | 617 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2024 |
| EcoO109I | RGGNCCY | 3 cut(s) | 566, 748, 2029 |
| EcoO65I | GGTNACC | 1 cut(s) | 617 |
| EcoRI | GAATTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| EcoRV | GATATC | 1 cut(s) | 832 |
| EcoT14I | CCWWGG | 4 cut(s) | 964, 1597, 1841, 1891 |
| EcoT22I | ATGCAT | 1 cut(s) | 84 |
| EcoT38I | GRGCYC | 1 cut(s) | 1933 |
| ErhI | CCWWGG | 4 cut(s) | 964, 1597, 1841, 1891 |
| Esp3I | CGTCTC | 1 cut(s) | 1668 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1692, 1724 |
| FaqI | GGGAC | 1 cut(s) | 449 |
| FauNDI | CATATG | 1 cut(s) | 1353 |
| FbaI | TGATCA | 2 cut(s) | 370, 1099 |
| FblI | GTMKAC | 1 cut(s) | 1981 |
| FokI | GGATG | 4 cut(s) | 374, 836, 1166, 1775 |
| FriOI | GRGCYC | 1 cut(s) | 1933 |
| FspBI | CTAG | 6 cut(s) | 308, 1247, 1341, 1466, 1598, 1851 |
| FspI | TGCGCA | 1 cut(s) | 2042 |
| GlaI | GCGC | 3 cut(s) | 287, 1025, 2042 |
| GsaI | CCCAGC | 1 cut(s) | 1658 |
| GsuI | CTGGAG | 1 cut(s) | 615 |
| HaeIII | GGCC | 5 cut(s) | 567, 1464, 1818, 1876, 1890 |
| HapII | CCGG | 1 cut(s) | 1732 |
| HgaI | GACGC | 1 cut(s) | 362 |
| HhaI | GCGC | 3 cut(s) | 288, 1026, 2043 |
| Hin1I | GRCGYC | 1 cut(s) | 354 |
| Hin6I | GCGC | 3 cut(s) | 286, 1024, 2041 |
| HinP1I | GCGC | 3 cut(s) | 286, 1024, 2041 |
| HincII | GTYRAC | 1 cut(s) | 1982 |
| HindII | GTYRAC | 1 cut(s) | 1982 |
| HindIII | AAGCTT | 2 cut(s) | 114, 142 |
| HinfI | GANTC | 8 cut(s) | 521, 611, 887, 971, 1115, 1124, 1360, 2047 |
| HpaII | CCGG | 1 cut(s) | 1732 |
| HphI | GGTGA | 4 cut(s) | 242, 629, 1117, 1220 |
| Hpy166II | GTNNAC | 4 cut(s) | 635, 722, 1403, 1982 |
| Hpy188III | TCNNGA | 9 cut(s) | 209, 398, 594, 735, 791, 1302, 1559, 1582, 1744 |
| Hpy8I | GTNNAC | 4 cut(s) | 635, 722, 1403, 1982 |
| HpyAV | CCTTC | 8 cut(s) | 75, 158, 322, 557, 1279, 1640, 1753, 1840 |
| HpyCH4III | ACNGT | 4 cut(s) | 719, 854, 1555, 1859 |
| HpyCH4IV | ACGT | 2 cut(s) | 30, 499 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 141, 1223, 1232 |
| HpySE526I | ACGT | 2 cut(s) | 30, 499 |
| Hsp92I | GRCGYC | 1 cut(s) | 354 |
| HspAI | GCGC | 3 cut(s) | 286, 1024, 2041 |
| Ksp22I | TGATCA | 2 cut(s) | 370, 1099 |
| LguI | GCTCTTC | 1 cut(s) | 1341 |
| LmnI | GCTCC | 2 cut(s) | 1843, 2052 |
| LweI | GCATC | 3 cut(s) | 1144, 1753, 1976 |
| MaeI | CTAG | 6 cut(s) | 308, 1247, 1341, 1466, 1598, 1851 |
| MaeII | ACGT | 2 cut(s) | 30, 499 |
| MaeIII | GTNAC | 7 cut(s) | 260, 271, 303, 617, 893, 1162, 1796 |
| MfeI | CAATTG | 1 cut(s) | 1682 |
| MflI | RGATCY | 2 cut(s) | 737, 1561 |
| MhlI | GDGCHC | 4 cut(s) | 637, 1336, 1933, 1944 |
| MlyI | GAGTC | 4 cut(s) | 605, 1109, 1118, 2056 |
| MmeI | TCCRAC | 5 cut(s) | 713, 968, 1047, 1651, 2030 |
| Mph1103I | ATGCAT | 1 cut(s) | 84 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1890 |
| MspA1I | CMGCKG | 2 cut(s) | 1214, 1915 |
| MspI | CCGG | 1 cut(s) | 1732 |
| MspR9I | CCNGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| MunI | CAATTG | 1 cut(s) | 1682 |
| Mva1269I | GAATGC | 2 cut(s) | 703, 730 |
| MvaI | CCWGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 141, 1223, 1232 |
| NcoI | CCATGG | 1 cut(s) | 1891 |
| NdeI | CATATG | 1 cut(s) | 1353 |
| NheI | GCTAGC | 1 cut(s) | 1850 |
| NlaIV | GGNNCC | 3 cut(s) | 420, 1839, 1943 |
| NmeAIII | GCCGAG | 1 cut(s) | 382 |
| NmuCI | GTSAC | 4 cut(s) | 260, 303, 617, 1162 |
| NsbI | TGCGCA | 1 cut(s) | 2042 |
| NsiI | ATGCAT | 1 cut(s) | 84 |
| NspI | RCATGY | 2 cut(s) | 200, 758 |
| PagI | TCATGA | 1 cut(s) | 790 |
| PciSI | GCTCTTC | 1 cut(s) | 1341 |
| PctI | GAATGC | 2 cut(s) | 703, 730 |
| PfeI | GAWTC | 4 cut(s) | 521, 887, 971, 1360 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 593 |
| PfoI | TCCNGGA | 1 cut(s) | 1422 |
| PleI | GAGTC | 4 cut(s) | 605, 1109, 1118, 2055 |
| PpsI | GAGTC | 4 cut(s) | 605, 1109, 1118, 2055 |
| PpuMI | RGGWCCY | 2 cut(s) | 748, 2029 |
| PshAI | GACNNNNGTC | 1 cut(s) | 489 |
| PsiI | TTATAA | 1 cut(s) | 293 |
| Psp5II | RGGWCCY | 2 cut(s) | 748, 2029 |
| Psp6I | CCWGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| PspEI | GGTNACC | 1 cut(s) | 617 |
| PspFI | CCCAGC | 1 cut(s) | 1654 |
| PspGI | CCWGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| PspN4I | GGNNCC | 3 cut(s) | 420, 1839, 1943 |
| PspPI | GGNCC | 5 cut(s) | 566, 748, 1426, 1776, 2029 |
| PspPPI | RGGWCCY | 2 cut(s) | 748, 2029 |
| PstI | CTGCAG | 1 cut(s) | 1771 |
| PsuI | RGATCY | 2 cut(s) | 737, 1561 |
| PvuII | CAGCTG | 1 cut(s) | 1214 |
| RsaI | GTAC | 3 cut(s) | 498, 945, 1496 |
| RsaNI | GTAC | 3 cut(s) | 497, 944, 1495 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1890 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1776 |
| RsrII | CGGWCCG | 1 cut(s) | 1776 |
| SalI | GTCGAC | 1 cut(s) | 1980 |
| SapI | GCTCTTC | 1 cut(s) | 1341 |
| Sau96I | GGNCC | 5 cut(s) | 566, 748, 1426, 1776, 2029 |
| SchI | GAGTC | 4 cut(s) | 605, 1109, 1118, 2056 |
| ScrFI | CCNGG | 4 cut(s) | 1170, 1232, 1424, 1927 |
| SduI | GDGCHC | 4 cut(s) | 637, 1336, 1933, 1944 |
| SfaNI | GCATC | 3 cut(s) | 1144, 1753, 1976 |
| SfcI | CTRYAG | 3 cut(s) | 933, 1767, 1905 |
| SinI | GGWCC | 4 cut(s) | 748, 1426, 1776, 2029 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1890 |
| SmlI | CTYRAG | 2 cut(s) | 174, 266 |
| SmoI | CTYRAG | 2 cut(s) | 174, 266 |
| SpeI | ACTAGT | 1 cut(s) | 1246 |
| SsiI | CCGC | 2 cut(s) | 1783, 1913 |
| SspI | AATATT | 1 cut(s) | 1378 |
| SspMI | CTAG | 6 cut(s) | 308, 1247, 1341, 1466, 1598, 1851 |
| StyD4I | CCNGG | 4 cut(s) | 1168, 1230, 1422, 1925 |
| StyI | CCWWGG | 4 cut(s) | 964, 1597, 1841, 1891 |
| TaaI | ACNGT | 4 cut(s) | 719, 854, 1555, 1859 |
| TaiI | ACGT | 2 cut(s) | 33, 502 |
| TaqI | TCGA | 3 cut(s) | 1583, 1970, 1981 |
| TaqII | GACCGA | 1 cut(s) | 1764 |
| TatI | WGTACW | 1 cut(s) | 1494 |
| TauI | GCSGC | 1 cut(s) | 1915 |
| TfiI | GAWTC | 4 cut(s) | 521, 887, 971, 1360 |
| TscAI | CASTG | 4 cut(s) | 682, 732, 1522, 1960 |
| TseFI | GTSAC | 4 cut(s) | 260, 303, 617, 1162 |
| Tsp45I | GTSAC | 4 cut(s) | 260, 303, 617, 1162 |
| TspDTI | ATGAA | 9 cut(s) | 117, 238, 534, 779, 1008, 1095, 1340, 1523, 2030 |
| TspGWI | ACGGA | 4 cut(s) | 787, 965, 1166, 1768 |
| TspRI | CASTG | 4 cut(s) | 682, 732, 1522, 1960 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 593 |
| VneI | GTGCAC | 1 cut(s) | 633 |
| VpaK11BI | GGWCC | 4 cut(s) | 748, 1426, 1776, 2029 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2024 |
| XapI | RAATTY | 6 cut(s) | 124, 168, 378, 574, 801, 1306 |
| XceI | RCATGY | 2 cut(s) | 200, 758 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1228, 1811 |
| XmaJI | CCTAGG | 1 cut(s) | 1597 |
| XmiI | GTMKAC | 1 cut(s) | 1981 |
| XspI | CTAG | 6 cut(s) | 308, 1247, 1341, 1466, 1598, 1851 |
| Zsp2I | ATGCAT | 1 cut(s) | 84 |