Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0016070

Physical Location & Seq

Genomic Coordinates Forward (+)

24937842 .. 24940890

Gene Structure 3049 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G265900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGCCCAGTGTAAAAGTCCCAAGAAACTATCACGTACCGTTTCTTTTCAAACCCAAGGTCATACCCGGTTCTATTGAGGACCCCATCAAGCTTTTGAAAAAGGCAGCTGATACTAAGAACCTACGGTTAGGCAAAACAGTCCATGCCCATCTCATCCTTTCCAGTGAAACTTCTAAATTCCTTGACATATTTCATGCTAACTCTCTCATCAACTTATATGCAAAATGTGACCGAATTACAACTGCCCGCCATTTGTTTGAATGTATGCCCAAGAGAAATGTGGTATCTTGGACTGCCTTGATGGCTGGCTATTTACATAAAGGGCTGACCTTGGAAGTTCTTGGCTTGTTCAAGACTATGGTATCTGTGGATAATTTGTGCCCGAATGAATTTGTTTTTGCGACTGTTCTTTCTTCTTGTTCTGGCAGTGGGAGAGTTGAAGAGGGAAAGCAGTGCCATGGCTATGTATTGAAGTCTGGATTGTTGTCTTATCAGTATGTTAAGAATGCACTAGTTCACATGTATTCAAGTTGTTCAGAAGTGGAAGCGGCTATGAGGGTTCTGAACACTGTGCCAGGTGATGATATTCTTTCGTATAATTCGGTTGTAAATGGGCTCTTAGAACATGGGCATGTGAAGGAAGCAATGGATATTTTGGATATGATGATAGGTCAGTGCAAGGCTTGGGACAATGTTACATACATTACCATTTTTGGCGTTTGTGCCCATCTTAAGGATTTGAGATTGGGTCTGCAAGTTCACAGCCAAATGTTGAAGACAGATATCGACTGTGATGTCTTTCTAAGTAGTGCAATGATTGACATGTATGGGAAATGTGGTAAGGTTTTGAATGCATTGAAAGTTTTTGATGGCTTGCAAACTCGGAACATAGTCTCCTGGACTGCAATCATGGCCGCTTATTTCCAAAATGGGTGCTTTGAGGAAGCATTAGGTCTATTGTCACAGATGGAATTTGAAGATATTCTTCCAAATGAATATACTTTTGCTGTCTTGCTTAACTCATGTGCAGGTTTGTCTGCACTAAGACATGGAGATCTATTGCATGCCAGTGTTGAGAAGTCGGGTTTTAAAGACCATGCCATTGTGGGGAATGCTTTGGTCAATATGTATTCAAAGTGTGGCAACATTCAAGCAGCAAATGACGTGTTCTTGGATATGACATCTCGAGACGCTGTTACCTGGAATGCAATGATATCAGGATTTTCCCATCATGGGCTTGGTAACGAAGCGCTGAATGTGTTTCAAGATATGTTGGAAGCAGGAGAGCGTCCTAACAATATTACTTTTGTTGGTGTTCTCTCAGCTTGTGCTCATTTGGGTCTGGTGCAAGAAGGATTCTACTATTTGAACCAGCTAATGAAACAGATTGGCATTGAACCCGGACTAGAGCATCATACTTGTATTGTAGGGCTCCTCAGCAGGGCTGGACAACTTGATCAAGCTGAGAAATATATGAGGACTATGCCAGTCAAGTGGGACATTGTTGCCTGGCGAAGTTTGCTCAATGCTTGTCATGTACATAAAAGTTATGGCTTAGGTAAGCGAGTAGCAGAGGTTGTTGTGCAAATGGACCCTAATGACGTGGGAACATATACACTATTGTCAAATATGTATGCCAAGGCAAACAGGTGGGATGGAGTTGTGCAGATCCGGAAATTGATGAGGGAAAAAAACATCAAGAAAGAACCTGGGGTGAGCTGGGTAGAGATAAGAAATACTACCCATATCTTTGTTTCGGATGATAACATACACCCAGAGTCCAGTCAGATACATGAAAAAGTTGGGGAATTGTTGGCCAAGATTAAACTATTGGGATATGTGCCAGATATTGCTGCAGTGCTACATGATGTGGACGATGAGCAAAAGGAAGATTATCTTAGTTATCACAGCGAGAAGCTTGCAATAGCATATGCCCTCATGAAAACACCTACAGAAGTGCCCATTCGTGTTATTAAGAACCTCAGGATATGCGATGATTGCCATGCAGCTGTGAAACTTATTTCAAAGGTCACAAACAGGTTGATAATTGTTAGAGATGCCAATCGATTCCATCAATTTCAGGACGGTAAATGCTCTTGTGCAGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

705

Amino Acids

78.65

Weight (kDa)

6.75

Isoelectric Point (pI)

34.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39680
fragaria_vesca	FvH4_6g48230
malus_domestica	MD09G1052800.v1.1
prunus_persica	Prupe.3G265900_v2.0.a1
pyrus_communis	pycom111g04400
rosa_chinensis	RchiOBHm_Chr2g0167741
rosa_laevigata	RLG00000021750
rosa_multiflora	Rmu_sc0002143.1_g000004
rosa_roxburghii	Rroxscaffold_2G00083290
rosa_rugosa	Rorug02G0531800
rosa_samantha	Rh2AG600700 Rh2BG611300 Rh2CG581600 Rh2DG623800
rosa_wichuraiana	Rw2G049860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	794
Acc36I	ACCTGC	1 cut(s)	1019
AccIII	TCCGGA	1 cut(s)	1671
AciI	CCGC	3 cut(s)	247, 548, 915
AclWI	GGATC	1 cut(s)	1663
AcoI	YGGCCR	2 cut(s)	912, 1815
AcsI	RAATTY	3 cut(s)	176, 389, 971
AfaI	GTAC	2 cut(s)	36, 1539
AfeI	AGCGCT	1 cut(s)	1251
AfiI	CCNNNNNNNGG	4 cut(s)	733, 1107, 1233, 1441
AflII	CTTAAG	1 cut(s)	731
AflIII	ACRYGT	3 cut(s)	519, 822, 1164
AhlI	ACTAGT	1 cut(s)	511
AjiI	CACGTC	2 cut(s)	1165, 1603
AjnI	CCWGG	5 cut(s)	574, 896, 1199, 1508, 1708
AloI	GAACNNNNNNTCC	2 cut(s)	878, 910
AluBI	AGCT	8 cut(s)	91, 107, 1325, 1375, 1463, 1719, 1918, 2009
AluI	AGCT	8 cut(s)	91, 107, 1325, 1375, 1463, 1719, 1918, 2009
Alw21I	GWGCWC	1 cut(s)	1333
Alw26I	GTCTC	2 cut(s)	898, 1182
AlwI	GGATC	1 cut(s)	1663
Ama87I	CYCGRG	1 cut(s)	1185
Aor13HI	TCCGGA	1 cut(s)	1671
Aor51HI	AGCGCT	1 cut(s)	1251
AoxI	GGCC	2 cut(s)	912, 1815
ApeKI	GCWGC	4 cut(s)	104, 1154, 1853, 2006
ApoI	RAATTY	3 cut(s)	176, 389, 971
ArsI	GACNNNNNNTTYG	2 cut(s)	42, 74
Asp700I	GAANNNNTTC	1 cut(s)	981
AspLEI	GCGC	1 cut(s)	1252
AspS9I	GGNCC	2 cut(s)	79, 1591
AsuC2I	CCSGG	2 cut(s)	66, 1401
AsuHPI	GGTGA	2 cut(s)	590, 1726
AvaI	CYCGRG	1 cut(s)	1185
AvaII	GGWCC	2 cut(s)	79, 1591
AxyI	CCTNAGG	1 cut(s)	1982
BaeGI	GKGCMC	3 cut(s)	383, 727, 1962
BaeI	ACNNNNGTAYC	2 cut(s)	345, 378
BalI	TGGCCA	1 cut(s)	1817
BanII	GRGCYC	2 cut(s)	618, 1434
BbsI	GAAGAC	1 cut(s)	782
Bbv12I	GWGCWC	1 cut(s)	1333
BbvCI	CCTCAGC	1 cut(s)	1436
BbvI	GCAGC	4 cut(s)	116, 1166, 1840, 2018
BccI	CCATC	9 cut(s)	92, 156, 295, 735, 863, 961, 1236, 1649, 2079
BcgI	CGANNNNNNTGC	2 cut(s)	1901, 1935
BciT130I	CCWGG	5 cut(s)	576, 898, 1201, 1510, 1710
BclI	TGATCA	1 cut(s)	1456
BcnI	CCSGG	2 cut(s)	66, 1401
BcoDI	GTCTC	2 cut(s)	898, 1182
BcuI	ACTAGT	1 cut(s)	511
BfaI	CTAG	2 cut(s)	512, 1406
BfmI	CTRYAG	2 cut(s)	1854, 1950
BfoI	RGCGCY	1 cut(s)	1253
BfrI	CTTAAG	1 cut(s)	731
BfuAI	ACCTGC	1 cut(s)	1019
BglI	GCCNNNNNGGC	1 cut(s)	302
BglII	AGATCT	1 cut(s)	1054
BisI	GCNGC	6 cut(s)	105, 549, 915, 1155, 1854, 2007
BlsI	GCNGC	6 cut(s)	106, 550, 916, 1156, 1855, 2008
Bme1390I	CCNGG	7 cut(s)	66, 576, 898, 1201, 1401, 1510, 1710
Bme18I	GGWCC	2 cut(s)	79, 1591
BmeT110I	CYCGRG	1 cut(s)	1185
BmgBI	CACGTC	2 cut(s)	1165, 1603
BmgT120I	GGNCC	2 cut(s)	79, 1591
BmiI	GGNNCC	3 cut(s)	81, 1433, 1593
BmrFI	CCNGG	7 cut(s)	66, 576, 898, 1201, 1401, 1510, 1710
BmsI	GCATC	2 cut(s)	1420, 2047
BpiI	GAAGAC	1 cut(s)	782
Bpu10I	CCTNAGC	2 cut(s)	1436, 1555
BpuMI	CCSGG	2 cut(s)	66, 1401
Bsa29I	ATCGAT	1 cut(s)	2065
BsaAI	YACGTR	1 cut(s)	34
BsaBI	GATNNNNATC	1 cut(s)	2061
BsaJI	CCNNGG	5 cut(s)	54, 330, 457, 1638, 1709
BsaWI	WCCGGW	1 cut(s)	1671
BsaXI	ACNNNNNCTCC	2 cut(s)	878, 908
Bsc4I	CCNNNNNNNGG	4 cut(s)	733, 1107, 1233, 1441
Bse1I	ACTGG	6 cut(s)	6, 162, 1068, 1487, 1782, 2114
Bse21I	CCTNAGG	1 cut(s)	1982
Bse3DI	GCAATG	3 cut(s)	651, 819, 1215
Bse8I	GATNNNNATC	1 cut(s)	2061
BseAI	TCCGGA	1 cut(s)	1671
BseBI	CCWGG	5 cut(s)	576, 898, 1201, 1510, 1710
BseCI	ATCGAT	1 cut(s)	2065
BseDI	CCNNGG	5 cut(s)	54, 330, 457, 1638, 1709
BseGI	GGATG	3 cut(s)	153, 1660, 1765
BseJI	GATNNNNATC	1 cut(s)	2061
BseLI	CCNNNNNNNGG	4 cut(s)	733, 1107, 1233, 1441
BseMI	GCAATG	3 cut(s)	651, 819, 1215
BseMII	CTCAG	4 cut(s)	1335, 1450, 1455, 1996
BseNI	ACTGG	6 cut(s)	6, 162, 1068, 1487, 1782, 2114
BseRI	GAGGAG	1 cut(s)	1424
BseSI	GKGCMC	3 cut(s)	383, 727, 1962
BseXI	GCAGC	4 cut(s)	116, 1166, 1840, 2018
BseYI	CCCAGC	1 cut(s)	1719
BsgI	GTGCAG	3 cut(s)	1023, 1047, 1685
BshFI	GGCC	2 cut(s)	914, 1817
BshVI	ATCGAT	1 cut(s)	2065
BsiHKAI	GWGCWC	1 cut(s)	1333
BsiHKCI	CYCGRG	1 cut(s)	1185
BsiSI	CCGG	3 cut(s)	66, 1401, 1672
BslFI	GGGAC	3 cut(s)	2, 701, 1511
BslI	CCNNNNNNNGG	4 cut(s)	733, 1107, 1233, 1441
BsmAI	GTCTC	2 cut(s)	898, 1182
BsmBI	CGTCTC	1 cut(s)	1182
BsmFI	GGGAC	3 cut(s)	2, 701, 1511
BsmI	GAATGC	4 cut(s)	511, 856, 1117, 1210
BsnI	GGCC	2 cut(s)	914, 1817
BsoBI	CYCGRG	1 cut(s)	1185
Bsp1286I	GDGCHC	6 cut(s)	383, 618, 727, 1333, 1434, 1962
Bsp13I	TCCGGA	1 cut(s)	1671
Bsp1407I	TGTACA	1 cut(s)	1537
Bsp143I	GATC	3 cut(s)	1054, 1456, 1668
Bsp19I	CCATGG	1 cut(s)	457
BspACI	CCGC	3 cut(s)	247, 548, 915
BspANI	GGCC	2 cut(s)	914, 1817
BspCNI	CTCAG	4 cut(s)	1334, 1449, 1456, 1995
BspDI	ATCGAT	1 cut(s)	2065
BspEI	TCCGGA	1 cut(s)	1671
BspHI	TCATGA	1 cut(s)	1938
BspLI	GGNNCC	3 cut(s)	81, 1433, 1593
BspMAI	CTGCAG	1 cut(s)	1858
BspMI	ACCTGC	1 cut(s)	1019
BspPI	GGATC	1 cut(s)	1663
BspTI	CTTAAG	1 cut(s)	731
BsrDI	GCAATG	3 cut(s)	651, 819, 1215
BsrGI	TGTACA	1 cut(s)	1537
BsrI	ACTGG	6 cut(s)	6, 162, 1068, 1487, 1782, 2114
BssECI	CCNNGG	5 cut(s)	54, 330, 457, 1638, 1709
BssMI	GATC	3 cut(s)	1054, 1456, 1668
BssT1I	CCWWGG	4 cut(s)	54, 330, 457, 1638
Bst2UI	CCWGG	5 cut(s)	576, 898, 1201, 1510, 1710
Bst4CI	ACNGT	7 cut(s)	39, 126, 139, 406, 571, 791, 2087
Bst6I	CTCTTC	1 cut(s)	435
BstAFI	CTTAAG	1 cut(s)	731
BstAUI	TGTACA	1 cut(s)	1537
BstBAI	YACGTR	1 cut(s)	34
BstC8I	GCNNGC	5 cut(s)	247, 307, 875, 1065, 1920
BstDSI	CCRYGG	1 cut(s)	457
BstF5I	GGATG	3 cut(s)	153, 1660, 1765
BstH2I	RGCGCY	1 cut(s)	1253
BstHHI	GCGC	1 cut(s)	1252
BstKTI	GATC	3 cut(s)	1057, 1459, 1671
BstMAI	GTCTC	2 cut(s)	898, 1182
BstMBI	GATC	3 cut(s)	1054, 1456, 1668
BstMWI	GCNNNNNNNGC	4 cut(s)	302, 911, 1519, 1998
BstNI	CCWGG	5 cut(s)	576, 898, 1201, 1510, 1710
BstNSI	RCATGY	4 cut(s)	523, 635, 826, 1067
BstSCI	CCNGG	7 cut(s)	64, 574, 896, 1199, 1399, 1508, 1708
BstSFI	CTRYAG	2 cut(s)	1854, 1950
BstSLI	GKGCMC	3 cut(s)	383, 727, 1962
BstV1I	GCAGC	4 cut(s)	116, 1166, 1840, 2018
BstV2I	GAAGAC	1 cut(s)	782
BstX2I	RGATCY	2 cut(s)	1054, 1668
BstXI	CCANNNNNNTGG	1 cut(s)	1494
BstYI	RGATCY	2 cut(s)	1054, 1668
Bsu15I	ATCGAT	1 cut(s)	2065
Bsu36I	CCTNAGG	1 cut(s)	1982
BsuRI	GGCC	2 cut(s)	914, 1817
BsuTUI	ATCGAT	1 cut(s)	2065
BtgI	CCRYGG	1 cut(s)	457
BtgZI	GCGATG	1 cut(s)	2007
BtrI	CACGTC	2 cut(s)	1165, 1603
BtsCI	GGATG	3 cut(s)	153, 1660, 1765
BtsI	GCAGTG	3 cut(s)	433, 458, 1863
BtsIMutI	CAGTG	8 cut(s)	13, 169, 433, 458, 567, 680, 1075, 1863
BveI	ACCTGC	1 cut(s)	1019
Cac8I	GCNNGC	5 cut(s)	247, 307, 875, 1065, 1920
CciI	TCATGA	1 cut(s)	1938
CfoI	GCGC	1 cut(s)	1252
Cfr13I	GGNCC	2 cut(s)	79, 1591
ClaI	ATCGAT	1 cut(s)	2065
CseI	GACGC	2 cut(s)	1199, 1277
Csp6I	GTAC	2 cut(s)	35, 1538
CviQI	GTAC	2 cut(s)	35, 1538
DpnI	GATC	3 cut(s)	1056, 1458, 1670
DpnII	GATC	3 cut(s)	1054, 1456, 1668
DraI	TTTAAA	1 cut(s)	1090
DrdI	GACNNNNNNGTC	1 cut(s)	794
DseDI	GACNNNNNNGTC	1 cut(s)	794
EaeI	YGGCCR	2 cut(s)	912, 1815
Eam1104I	CTCTTC	1 cut(s)	435
EarI	CTCTTC	1 cut(s)	435
Eco130I	CCWWGG	4 cut(s)	54, 330, 457, 1638
Eco24I	GRGCYC	2 cut(s)	618, 1434
Eco32I	GATATC	2 cut(s)	784, 1215
Eco47I	GGWCC	2 cut(s)	79, 1591
Eco47III	AGCGCT	1 cut(s)	1251
Eco81I	CCTNAGG	1 cut(s)	1982
Eco88I	CYCGRG	1 cut(s)	1185
EcoO109I	RGGNCCY	1 cut(s)	79
EcoRII	CCWGG	5 cut(s)	574, 896, 1199, 1508, 1708
EcoRV	GATATC	2 cut(s)	784, 1215
EcoT14I	CCWWGG	4 cut(s)	54, 330, 457, 1638
EcoT22I	ATGCAT	1 cut(s)	856
EcoT38I	GRGCYC	2 cut(s)	618, 1434
ErhI	CCWWGG	4 cut(s)	54, 330, 457, 1638
Esp3I	CGTCTC	1 cut(s)	1182
FalI	AAGNNNNNCTT	4 cut(s)	969, 1001, 1881, 1913
FaqI	GGGAC	3 cut(s)	2, 701, 1511
FauI	CCCGC	1 cut(s)	254
FauNDI	CATATG	1 cut(s)	1930
FbaI	TGATCA	1 cut(s)	1456
Fnu4HI	GCNGC	6 cut(s)	105, 549, 915, 1155, 1854, 2007
FokI	GGATG	3 cut(s)	140, 1667, 1772
FriOI	GRGCYC	2 cut(s)	618, 1434
Fsp4HI	GCNGC	6 cut(s)	105, 549, 915, 1155, 1854, 2007
FspBI	CTAG	2 cut(s)	512, 1406
GlaI	GCGC	1 cut(s)	1251
GluI	GCNGC	6 cut(s)	105, 549, 915, 1155, 1854, 2007
GsaI	CCCAGC	1 cut(s)	1723
HaeII	RGCGCY	1 cut(s)	1253
HaeIII	GGCC	2 cut(s)	914, 1817
HapII	CCGG	3 cut(s)	66, 1401, 1672
HgaI	GACGC	2 cut(s)	1199, 1277
HhaI	GCGC	1 cut(s)	1252
Hin6I	GCGC	1 cut(s)	1250
HinP1I	GCGC	1 cut(s)	1250
HindIII	AAGCTT	2 cut(s)	89, 1916
HinfI	GANTC	3 cut(s)	1356, 1778, 2067
HpaII	CCGG	3 cut(s)	66, 1401, 1672
HphI	GGTGA	2 cut(s)	590, 1726
Hpy166II	GTNNAC	3 cut(s)	517, 760, 1873
Hpy188I	TCNGA	5 cut(s)	538, 564, 885, 1759, 1788
Hpy8I	GTNNAC	3 cut(s)	517, 760, 1873
HpyAV	CCTTC	2 cut(s)	631, 1346
HpyCH4III	ACNGT	7 cut(s)	39, 126, 139, 406, 571, 791, 2087
HpyCH4IV	ACGT	3 cut(s)	33, 1164, 1602
HpyF10VI	GCNNNNNNNGC	4 cut(s)	302, 911, 1519, 1998
HpySE526I	ACGT	3 cut(s)	33, 1164, 1602
HspAI	GCGC	1 cut(s)	1250
Kpn2I	TCCGGA	1 cut(s)	1671
Ksp22I	TGATCA	1 cut(s)	1456
Kzo9I	GATC	3 cut(s)	1054, 1456, 1668
LmnI	GCTCC	1 cut(s)	1437
Lsp1109I	GCAGC	4 cut(s)	116, 1166, 1840, 2018
LweI	GCATC	2 cut(s)	1420, 2047
MaeI	CTAG	2 cut(s)	512, 1406
MaeII	ACGT	3 cut(s)	33, 1164, 1602
MaeIII	GTNAC	6 cut(s)	227, 694, 960, 1195, 1241, 2029
MalI	GATC	3 cut(s)	1056, 1458, 1670
MboI	GATC	3 cut(s)	1054, 1456, 1668
MboII	GAAGA	6 cut(s)	405, 452, 787, 977, 989, 1901
MflI	RGATCY	2 cut(s)	1054, 1668
MhlI	GDGCHC	6 cut(s)	383, 618, 727, 1333, 1434, 1962
MlsI	TGGCCA	1 cut(s)	1817
MluNI	TGGCCA	1 cut(s)	1817
MlyI	GAGTC	1 cut(s)	1787
MmeI	TCCRAC	1 cut(s)	1254
Mox20I	TGGCCA	1 cut(s)	1817
Mph1103I	ATGCAT	1 cut(s)	856
MroI	TCCGGA	1 cut(s)	1671
MroXI	GAANNNNTTC	1 cut(s)	981
MscI	TGGCCA	1 cut(s)	1817
MseI	TTAA	6 cut(s)	501, 732, 1017, 1089, 1824, 1974
MslI	CAYNNNNRTG	3 cut(s)	462, 630, 1068
Msp20I	TGGCCA	1 cut(s)	1817
MspA1I	CMGCKG	2 cut(s)	107, 2009
MspCI	CTTAAG	1 cut(s)	731
MspI	CCGG	3 cut(s)	66, 1401, 1672
MspR9I	CCNGG	7 cut(s)	66, 576, 898, 1201, 1401, 1510, 1710
Mva1269I	GAATGC	4 cut(s)	511, 856, 1117, 1210
MvaI	CCWGG	5 cut(s)	576, 898, 1201, 1510, 1710
MwoI	GCNNNNNNNGC	4 cut(s)	302, 911, 1519, 1998
NciI	CCSGG	2 cut(s)	66, 1401
NcoI	CCATGG	1 cut(s)	457
NdeI	CATATG	1 cut(s)	1930
NdeII	GATC	3 cut(s)	1054, 1456, 1668
NlaIV	GGNNCC	3 cut(s)	81, 1433, 1593
NmuCI	GTSAC	3 cut(s)	227, 960, 2029
NsiI	ATGCAT	1 cut(s)	856
NspI	RCATGY	4 cut(s)	523, 635, 826, 1067
PaeI	GCATGC	1 cut(s)	1067
PaeR7I	CTCGAG	1 cut(s)	1185
PagI	TCATGA	1 cut(s)	1938
PciI	ACATGT	2 cut(s)	519, 822
PctI	GAATGC	4 cut(s)	511, 856, 1117, 1210
PdmI	GAANNNNTTC	1 cut(s)	981
PfeI	GAWTC	2 cut(s)	1356, 2067
PfoI	TCCNGGA	1 cut(s)	896
PkrI	GCNGC	6 cut(s)	106, 550, 916, 1156, 1855, 2008
PleI	GAGTC	1 cut(s)	1786
PpsI	GAGTC	1 cut(s)	1786
Ppu21I	YACGTR	1 cut(s)	34
PpuMI	RGGWCCY	1 cut(s)	79
PscI	ACATGT	2 cut(s)	519, 822
Psp5II	RGGWCCY	1 cut(s)	79
Psp6I	CCWGG	5 cut(s)	574, 896, 1199, 1508, 1708
PspFI	CCCAGC	1 cut(s)	1719
PspGI	CCWGG	5 cut(s)	574, 896, 1199, 1508, 1708
PspN4I	GGNNCC	3 cut(s)	81, 1433, 1593
PspPI	GGNCC	2 cut(s)	79, 1591
PspPPI	RGGWCCY	1 cut(s)	79
PstI	CTGCAG	1 cut(s)	1858
PsuI	RGATCY	2 cut(s)	1054, 1668
PvuII	CAGCTG	2 cut(s)	107, 2009
RsaI	GTAC	2 cut(s)	36, 1539
RsaNI	GTAC	2 cut(s)	35, 1538
RseI	CAYNNNNRTG	3 cut(s)	462, 630, 1068
SaqAI	TTAA	6 cut(s)	501, 732, 1017, 1089, 1824, 1974
SatI	GCNGC	6 cut(s)	105, 549, 915, 1155, 1854, 2007
Sau3AI	GATC	3 cut(s)	1054, 1456, 1668
Sau96I	GGNCC	2 cut(s)	79, 1591
SchI	GAGTC	1 cut(s)	1787
ScrFI	CCNGG	7 cut(s)	66, 576, 898, 1201, 1401, 1510, 1710
SduI	GDGCHC	6 cut(s)	383, 618, 727, 1333, 1434, 1962
SfaNI	GCATC	2 cut(s)	1420, 2047
SfcI	CTRYAG	2 cut(s)	1854, 1950
Sfr274I	CTCGAG	1 cut(s)	1185
SinI	GGWCC	2 cut(s)	79, 1591
SlaI	CTCGAG	1 cut(s)	1185
SmiMI	CAYNNNNRTG	3 cut(s)	462, 630, 1068
SmlI	CTYRAG	2 cut(s)	731, 1185
SmoI	CTYRAG	2 cut(s)	731, 1185
SpeI	ACTAGT	1 cut(s)	511
SphI	GCATGC	1 cut(s)	1067
SsiI	CCGC	3 cut(s)	247, 548, 915
SspI	AATATT	1 cut(s)	1300
SspMI	CTAG	2 cut(s)	512, 1406
StyD4I	CCNGG	7 cut(s)	64, 574, 896, 1199, 1399, 1508, 1708
StyI	CCWWGG	4 cut(s)	54, 330, 457, 1638
TaaI	ACNGT	7 cut(s)	39, 126, 139, 406, 571, 791, 2087
TaiI	ACGT	3 cut(s)	36, 1167, 1605
TaqI	TCGA	3 cut(s)	786, 1186, 2065
TaqII	GACCGA	1 cut(s)	246
TatI	WGTACW	1 cut(s)	1537
TauI	GCSGC	2 cut(s)	551, 917
TfiI	GAWTC	2 cut(s)	1356, 2067
Tru1I	TTAA	6 cut(s)	501, 732, 1017, 1089, 1824, 1974
Tru9I	TTAA	6 cut(s)	501, 732, 1017, 1089, 1824, 1974
TscAI	CASTG	8 cut(s)	13, 169, 433, 458, 574, 680, 1075, 1863
TseFI	GTSAC	3 cut(s)	227, 960, 2029
TseI	GCWGC	4 cut(s)	104, 1154, 1853, 2006
Tsp45I	GTSAC	3 cut(s)	227, 960, 2029
TspDTI	ATGAA	6 cut(s)	182, 402, 1008, 1394, 1809, 1955
TspRI	CASTG	8 cut(s)	13, 169, 433, 458, 574, 680, 1075, 1863
Vha464I	CTTAAG	1 cut(s)	731
VpaK11BI	GGWCC	2 cut(s)	79, 1591
XapI	RAATTY	3 cut(s)	176, 389, 971
XceI	RCATGY	4 cut(s)	523, 635, 826, 1067
XcmI	CCANNNNNNNNNTGG	2 cut(s)	277, 1235
XhoI	CTCGAG	1 cut(s)	1185
XmnI	GAANNNNTTC	1 cut(s)	981
XspI	CTAG	2 cut(s)	512, 1406
Zsp2I	ATGCAT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.