Prupe.3G278900_v2.0.a1

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
25556417 .. 25557937
1521 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G278900.1

Sequence Viewer

Length: 981 bp
ATGGTAGCGTTCCTCATTGTCTTCCTCACATCTCTGCTAACTCTCACCACTCTCCCCGCCGCAGAGTCGAGACTCTACAGCAACTACTACCAAAAATCGTGCCCGAGATTCAACCAAATCGTCCAAGACACCGTCACCAACAAGCAGATCACCAGCCCCACTACCGCCGCCGCCACCCTCCGCCTCTTCTTCCACGACTGCCTCCACAACGGCTGCGACGCCTCCATCCTCGTCTCCTCCACCCCCTTCAACAAGGCCGAGCGCGACGCCGACATCAATCTCTCCCTCCCCGGCGACGCCTTCGACGTCGTCGTTCGCGCCAAGACTGCCCTCGAACTAGCCTGCCCCAACACCGTCTCCTGCGCCGACATCCTCGCCGTCGCCACCCGCGACCTCGTCACCATGATGGGCGGGCCCTACTACAACGTACCGCTCGGCCGCCGCGACGGCCGAGTCTCCAAGGCCTCCGCCGTCGAGGGCACCCTCCCGAGGCCAGCCATGCCGGTGTCTCAGCTCATCCAGGTGTTCGGGTCCAGGGGCTTTTCCGTCCAGGAAATGGTTGCCCTCAGTGGGGCCCACACCATCGGGTTCACCCACTGCAGCGAGTTCAGCTCCGCGATCTACAACTACAGCAAGTCGGAGCAGTACGACCCGCAGTACAACCCGAGATTCGCCGCCGGGTTGCAGCAGGCCTGCGCCGATTACCACAAGAACCCGACGATGTCGGTGTTCAACGACGTAATGACCCCCAACAAATTCGACAATGTCTACTTCCAGAACTTGCCCAAGGGTTTGGGGCTTTTGAAGTCGGATCACGCCTTGTTAAATGACCCGAGAACCCGGCCCTTCGTGGAGCTCTACGCCAAGGACCAGAACACCTTCTTTCAGGCGTTTGCGAGGGCGATGGAGAAGCTCGGCCTGCACGGGATCCAGACCGGGAGGCGAGGAGAGATTAGGCACAGATGCGATGAGTTCAATTAA

Protein Analysis

327

Amino Acids

36.1

Weight (kDa)

8.08

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28200 AT5G40150
fragaria_vesca FvH4_6g50150 FvH4_6g50150
malus_domestica MD09G1039100.v1.1 MD17G1040100.v1.1
prunus_persica Prupe.3G278900_v2.0.a1
pyrus_communis pycom111g03080
rosa_chinensis RchiOBHm_Chr2g0170391
rosa_laevigata RLG00000021953
rosa_multiflora Rmu_sc0011601.1_g000014
rosa_rugosa Rorug02G0548700
rosa_samantha Rh2AG620200 Rh2BG631100 Rh2CG601000 Rh2DG644100
rosa_wichuraiana Rw2G051400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 452
AatII GACGTC 1 cut(s) 309
AccB1I GGYRCC 1 cut(s) 479
AccB7I CCANNNNNTGG 1 cut(s) 556
AccBSI CCGCTC 1 cut(s) 433
AccI GTMKAC 1 cut(s) 768
AccII CGCG 5 cut(s) 264, 318, 390, 444, 617
AclWI GGATC 3 cut(s) 819, 922, 935
AcoI YGGCCR 2 cut(s) 436, 448
AcsI RAATTY 1 cut(s) 755
AcyI GRCGYC 4 cut(s) 219, 267, 297, 306
AfaI GTAC 3 cut(s) 429, 647, 659
AfiI CCNNNNNNNGG 4 cut(s) 489, 556, 570, 571
AgsI TTSAA 5 cut(s) 112, 250, 733, 805, 976
AjnI CCWGG 3 cut(s) 519, 533, 549
AluBI AGCT 4 cut(s) 514, 612, 856, 913
AluI AGCT 4 cut(s) 514, 612, 856, 913
Alw21I GWGCWC 1 cut(s) 858
Alw26I GTCTC 5 cut(s) 64, 238, 361, 460, 513
AlwI GGATC 3 cut(s) 819, 922, 935
Ama87I CYCGRG 4 cut(s) 103, 487, 664, 832
ApaI GGGCCC 2 cut(s) 417, 577
ApeKI GCWGC 3 cut(s) 213, 600, 685
ApoI RAATTY 1 cut(s) 755
Asp700I GAANNNNTTC 1 cut(s) 878
AspLEI GCGC 4 cut(s) 264, 320, 365, 698
AspS9I GGNCC 7 cut(s) 413, 414, 531, 573, 574, 843, 868
AsuC2I CCSGG 4 cut(s) 291, 679, 841, 937
AsuHPI GGTGA 5 cut(s) 37, 127, 142, 391, 583
AvaI CYCGRG 4 cut(s) 103, 487, 664, 832
AvaII GGWCC 2 cut(s) 531, 868
BaeGI GKGCMC 4 cut(s) 104, 417, 482, 577
BamHI GGATCC 1 cut(s) 927
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 3 cut(s) 417, 577, 858
BbsI GAAGAC 1 cut(s) 13
Bbv12I GWGCWC 1 cut(s) 858
BbvI GCAGC 3 cut(s) 200, 612, 697
BccI CCATC 4 cut(s) 233, 400, 590, 898
BceAI ACGGC 4 cut(s) 226, 362, 455, 463
BciT130I CCWGG 3 cut(s) 521, 535, 551
BcnI CCSGG 4 cut(s) 291, 679, 841, 937
BcoDI GTCTC 5 cut(s) 64, 238, 361, 460, 513
BfaI CTAG 1 cut(s) 338
BfmI CTRYAG 3 cut(s) 76, 598, 628
BglI GCCNNNNNGGC 1 cut(s) 447
BisI GCNGC 9 cut(s) 60, 168, 171, 214, 439, 442, 601, 675, 686
BlsI GCNGC 9 cut(s) 61, 169, 172, 215, 440, 443, 602, 676, 687
Bme1390I CCNGG 7 cut(s) 291, 521, 535, 551, 679, 841, 937
Bme18I GGWCC 2 cut(s) 531, 868
BmeT110I CYCGRG 4 cut(s) 103, 487, 664, 832
BmgT120I GGNCC 7 cut(s) 413, 414, 531, 573, 574, 843, 868
BmiI GGNNCC 6 cut(s) 415, 481, 532, 574, 575, 929
BmrFI CCNGG 7 cut(s) 291, 521, 535, 551, 679, 841, 937
BmsI GCATC 1 cut(s) 953
BpiI GAAGAC 1 cut(s) 13
BplI GAGNNNNNCTC 2 cut(s) 596, 628
BpuMI CCSGG 4 cut(s) 291, 679, 841, 937
BsaHI GRCGYC 4 cut(s) 219, 267, 297, 306
BsaJI CCNNGG 6 cut(s) 289, 459, 488, 534, 786, 864
BsaXI ACNNNNNCTCC 2 cut(s) 341, 371
Bsc4I CCNNNNNNNGG 4 cut(s) 489, 556, 570, 571
Bse118I RCCGGY 1 cut(s) 502
BseBI CCWGG 3 cut(s) 521, 535, 551
BseDI CCNNGG 6 cut(s) 289, 459, 488, 534, 786, 864
BseGI GGATG 3 cut(s) 225, 369, 516
BseLI CCNNNNNNNGG 4 cut(s) 489, 556, 570, 571
BseMII CTCAG 2 cut(s) 524, 580
BseRI GAGGAG 2 cut(s) 226, 960
BseSI GKGCMC 4 cut(s) 104, 417, 482, 577
BseX3I CGGCCG 2 cut(s) 436, 448
BseXI GCAGC 3 cut(s) 200, 612, 697
BsgI GTGCAG 1 cut(s) 905
Bsh1236I CGCG 5 cut(s) 264, 318, 390, 444, 617
Bsh1285I CGRYCG 2 cut(s) 439, 451
BshNI GGYRCC 1 cut(s) 479
BsiEI CGRYCG 2 cut(s) 439, 451
BsiHKAI GWGCWC 1 cut(s) 858
BsiHKCI CYCGRG 4 cut(s) 103, 487, 664, 832
BsiSI CCGG 5 cut(s) 291, 503, 678, 841, 936
BslI CCNNNNNNNGG 4 cut(s) 489, 556, 570, 571
BsmAI GTCTC 5 cut(s) 64, 238, 361, 460, 513
BsmBI CGTCTC 2 cut(s) 238, 361
BsoBI CYCGRG 4 cut(s) 103, 487, 664, 832
Bsp120I GGGCCC 2 cut(s) 413, 573
Bsp1286I GDGCHC 5 cut(s) 104, 417, 482, 577, 858
Bsp143I GATC 4 cut(s) 147, 618, 811, 927
BspCNI CTCAG 2 cut(s) 523, 579
BspFNI CGCG 5 cut(s) 264, 318, 390, 444, 617
BspLI GGNNCC 6 cut(s) 415, 481, 532, 574, 575, 929
BspMAI CTGCAG 1 cut(s) 602
BspPI GGATC 3 cut(s) 819, 922, 935
BspT107I GGYRCC 1 cut(s) 479
BsrBI CCGCTC 1 cut(s) 433
BsrFI RCCGGY 1 cut(s) 502
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 6 cut(s) 289, 459, 488, 534, 786, 864
BssMI GATC 4 cut(s) 147, 618, 811, 927
BssNI GRCGYC 4 cut(s) 219, 267, 297, 306
BssT1I CCWWGG 3 cut(s) 459, 786, 864
Bst2UI CCWGG 3 cut(s) 521, 535, 551
Bst4CI ACNGT 2 cut(s) 133, 355
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 4 cut(s) 219, 267, 297, 306
BstC8I GCNNGC 6 cut(s) 343, 413, 495, 690, 694, 920
BstDEI CTNAG 2 cut(s) 510, 566
BstF5I GGATG 3 cut(s) 225, 369, 516
BstFNI CGCG 5 cut(s) 264, 318, 390, 444, 617
BstHHI GCGC 4 cut(s) 264, 320, 365, 698
BstKTI GATC 4 cut(s) 150, 621, 814, 930
BstMAI GTCTC 5 cut(s) 64, 238, 361, 460, 513
BstMBI GATC 4 cut(s) 147, 618, 811, 927
BstMCI CGRYCG 2 cut(s) 439, 451
BstMWI GCNNNNNNNGC 5 cut(s) 326, 447, 499, 609, 919
BstNI CCWGG 3 cut(s) 521, 535, 551
BstSCI CCNGG 7 cut(s) 289, 519, 533, 549, 677, 839, 935
BstSFI CTRYAG 3 cut(s) 76, 598, 628
BstSLI GKGCMC 4 cut(s) 104, 417, 482, 577
BstUI CGCG 5 cut(s) 264, 318, 390, 444, 617
BstV1I GCAGC 3 cut(s) 200, 612, 697
BstV2I GAAGAC 1 cut(s) 13
BstX2I RGATCY 1 cut(s) 927
BstXI CCANNNNNNTGG 1 cut(s) 793
BstYI RGATCY 1 cut(s) 927
BstZI CGGCCG 2 cut(s) 436, 448
BtgZI GCGATG 1 cut(s) 917
BtsCI GGATG 3 cut(s) 225, 369, 516
BtsI GCAGTG 1 cut(s) 595
BtsIMutI CAGTG 2 cut(s) 574, 595
Cac8I GCNNGC 6 cut(s) 343, 413, 495, 690, 694, 920
CfoI GCGC 4 cut(s) 264, 320, 365, 698
Cfr10I RCCGGY 1 cut(s) 502
Cfr13I GGNCC 7 cut(s) 413, 414, 531, 573, 574, 843, 868
CseI GACGC 3 cut(s) 227, 275, 305
Csp6I GTAC 3 cut(s) 428, 646, 658
CviAII CATG 2 cut(s) 403, 499
CviQI GTAC 3 cut(s) 428, 646, 658
DdeI CTNAG 2 cut(s) 510, 566
DpnI GATC 4 cut(s) 149, 620, 813, 929
DpnII GATC 4 cut(s) 147, 618, 811, 927
DrdI GACNNNNNNGTC 1 cut(s) 452
DseDI GACNNNNNNGTC 1 cut(s) 452
EaeI YGGCCR 2 cut(s) 436, 448
EagI CGGCCG 2 cut(s) 436, 448
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 2 cut(s) 170, 457
Ecl136II GAGCTC 1 cut(s) 856
EclXI CGGCCG 2 cut(s) 436, 448
Eco130I CCWWGG 3 cut(s) 459, 786, 864
Eco147I AGGCCT 2 cut(s) 464, 692
Eco24I GRGCYC 3 cut(s) 417, 577, 858
Eco47I GGWCC 2 cut(s) 531, 868
Eco52I CGGCCG 2 cut(s) 436, 448
Eco53kI GAGCTC 1 cut(s) 856
Eco88I CYCGRG 4 cut(s) 103, 487, 664, 832
EcoICRI GAGCTC 1 cut(s) 856
EcoO109I RGGNCCY 2 cut(s) 414, 573
EcoRII CCWGG 3 cut(s) 519, 533, 549
EcoT14I CCWWGG 3 cut(s) 459, 786, 864
EcoT38I GRGCYC 3 cut(s) 417, 577, 858
ErhI CCWWGG 3 cut(s) 459, 786, 864
Esp3I CGTCTC 2 cut(s) 238, 361
FaeI CATG 2 cut(s) 406, 502
FaiI YATR 2 cut(s) 404, 500
FatI CATG 2 cut(s) 402, 498
FauI CCCGC 4 cut(s) 64, 395, 404, 660
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 9 cut(s) 60, 168, 171, 214, 439, 442, 601, 675, 686
FokI GGATG 3 cut(s) 212, 356, 503
FriOI GRGCYC 3 cut(s) 417, 577, 858
Fsp4HI GCNGC 9 cut(s) 60, 168, 171, 214, 439, 442, 601, 675, 686
FspBI CTAG 1 cut(s) 338
GlaI GCGC 4 cut(s) 263, 319, 364, 697
GluI GCNGC 9 cut(s) 60, 168, 171, 214, 439, 442, 601, 675, 686
HapII CCGG 5 cut(s) 291, 503, 678, 841, 936
HgaI GACGC 3 cut(s) 227, 275, 305
HhaI GCGC 4 cut(s) 264, 320, 365, 698
Hin1I GRCGYC 4 cut(s) 219, 267, 297, 306
Hin1II CATG 2 cut(s) 406, 502
Hin6I GCGC 4 cut(s) 262, 318, 363, 696
HinP1I GCGC 4 cut(s) 262, 318, 363, 696
HinfI GANTC 5 cut(s) 65, 72, 108, 453, 669
HpaII CCGG 5 cut(s) 291, 503, 678, 841, 936
HphI GGTGA 5 cut(s) 37, 127, 142, 391, 583
Hpy166II GTNNAC 2 cut(s) 591, 769
Hpy188I TCNGA 2 cut(s) 640, 811
Hpy188III TCNNGA 4 cut(s) 69, 487, 775, 931
Hpy8I GTNNAC 2 cut(s) 591, 769
HpyAV CCTTC 4 cut(s) 256, 310, 856, 889
HpyCH4III ACNGT 2 cut(s) 133, 355
HpyCH4IV ACGT 3 cut(s) 306, 426, 738
HpyCH4V TGCA 3 cut(s) 600, 685, 922
HpyF10VI GCNNNNNNNGC 5 cut(s) 326, 447, 499, 609, 919
HpyF3I CTNAG 2 cut(s) 510, 566
HpySE526I ACGT 3 cut(s) 306, 426, 738
Hsp92I GRCGYC 4 cut(s) 219, 267, 297, 306
Hsp92II CATG 2 cut(s) 406, 502
HspAI GCGC 4 cut(s) 262, 318, 363, 696
Kzo9I GATC 4 cut(s) 147, 618, 811, 927
LmnI GCTCC 3 cut(s) 617, 640, 853
Lsp1109I GCAGC 3 cut(s) 200, 612, 697
LweI GCATC 1 cut(s) 953
MaeI CTAG 1 cut(s) 338
MaeII ACGT 3 cut(s) 306, 426, 738
MaeIII GTNAC 2 cut(s) 133, 397
MalI GATC 4 cut(s) 149, 620, 813, 929
MbiI CCGCTC 1 cut(s) 433
MboI GATC 4 cut(s) 147, 618, 811, 927
MboII GAAGA 3 cut(s) 13, 178, 181
MflI RGATCY 1 cut(s) 927
MhlI GDGCHC 5 cut(s) 104, 417, 482, 577, 858
MluCI AATT 2 cut(s) 755, 976
MlyI GAGTC 3 cut(s) 66, 74, 462
MmeI TCCRAC 2 cut(s) 618, 789
MroXI GAANNNNTTC 1 cut(s) 878
MseI TTAA 2 cut(s) 824, 979
MslI CAYNNNNRTG 3 cut(s) 404, 503, 521
MspI CCGG 5 cut(s) 291, 503, 678, 841, 936
MspR9I CCNGG 7 cut(s) 291, 521, 535, 551, 679, 841, 937
MvaI CCWGG 3 cut(s) 521, 535, 551
MvnI CGCG 5 cut(s) 264, 318, 390, 444, 617
MwoI GCNNNNNNNGC 5 cut(s) 326, 447, 499, 609, 919
NciI CCSGG 4 cut(s) 291, 679, 841, 937
NdeII GATC 4 cut(s) 147, 618, 811, 927
NlaIII CATG 2 cut(s) 406, 502
NlaIV GGNNCC 6 cut(s) 415, 481, 532, 574, 575, 929
NmeAIII GCCGAG 4 cut(s) 283, 414, 476, 894
NmuCI GTSAC 2 cut(s) 133, 397
PceI AGGCCT 2 cut(s) 464, 692
PcsI WCGNNNNNNNCGW 4 cut(s) 303, 309, 387, 441
PdmI GAANNNNTTC 1 cut(s) 878
PfeI GAWTC 2 cut(s) 108, 669
PflFI GACNNNGTC 5 cut(s) 131, 308, 395, 721, 764
PflMI CCANNNNNTGG 1 cut(s) 556
PfoI TCCNGGA 1 cut(s) 549
PkrI GCNGC 9 cut(s) 61, 169, 172, 215, 440, 443, 602, 676, 687
PleI GAGTC 3 cut(s) 66, 73, 461
PpsI GAGTC 3 cut(s) 66, 73, 461
Psp124BI GAGCTC 1 cut(s) 858
Psp6I CCWGG 3 cut(s) 519, 533, 549
PspGI CCWGG 3 cut(s) 519, 533, 549
PspN4I GGNNCC 6 cut(s) 415, 481, 532, 574, 575, 929
PspOMI GGGCCC 2 cut(s) 413, 573
PspPI GGNCC 7 cut(s) 413, 414, 531, 573, 574, 843, 868
PstI CTGCAG 1 cut(s) 602
PsuI RGATCY 1 cut(s) 927
PsyI GACNNNGTC 5 cut(s) 131, 308, 395, 721, 764
RsaI GTAC 3 cut(s) 429, 647, 659
RsaNI GTAC 3 cut(s) 428, 646, 658
RseI CAYNNNNRTG 3 cut(s) 404, 503, 521
SacI GAGCTC 1 cut(s) 858
SaqAI TTAA 2 cut(s) 824, 979
SatI GCNGC 9 cut(s) 60, 168, 171, 214, 439, 442, 601, 675, 686
Sau3AI GATC 4 cut(s) 147, 618, 811, 927
Sau96I GGNCC 7 cut(s) 413, 414, 531, 573, 574, 843, 868
SchI GAGTC 3 cut(s) 66, 74, 462
ScrFI CCNGG 7 cut(s) 291, 521, 535, 551, 679, 841, 937
SduI GDGCHC 5 cut(s) 104, 417, 482, 577, 858
SfaNI GCATC 1 cut(s) 953
SfcI CTRYAG 3 cut(s) 76, 598, 628
SinI GGWCC 2 cut(s) 531, 868
SmiMI CAYNNNNRTG 3 cut(s) 404, 503, 521
Sse9I AATT 2 cut(s) 755, 976
SseBI AGGCCT 2 cut(s) 464, 692
SspMI CTAG 1 cut(s) 338
SstI GAGCTC 1 cut(s) 858
StuI AGGCCT 2 cut(s) 464, 692
StyD4I CCNGG 7 cut(s) 289, 519, 533, 549, 677, 839, 935
StyI CCWWGG 3 cut(s) 459, 786, 864
TaaI ACNGT 2 cut(s) 133, 355
TaiI ACGT 3 cut(s) 309, 429, 741
TaqI TCGA 5 cut(s) 68, 303, 333, 474, 759
TasI AATT 2 cut(s) 755, 976
TatI WGTACW 1 cut(s) 657
TauI GCSGC 6 cut(s) 62, 170, 173, 441, 444, 677
TfiI GAWTC 2 cut(s) 108, 669
Tru1I TTAA 2 cut(s) 824, 979
Tru9I TTAA 2 cut(s) 824, 979
TscAI CASTG 2 cut(s) 574, 602
TseFI GTSAC 2 cut(s) 133, 397
TseI GCWGC 3 cut(s) 213, 600, 685
Tsp45I GTSAC 2 cut(s) 133, 397
TspGWI ACGGA 1 cut(s) 535
TspRI CASTG 2 cut(s) 574, 602
Tth111I GACNNNGTC 5 cut(s) 131, 308, 395, 721, 764
Van91I CCANNNNNTGG 1 cut(s) 556
VpaK11BI GGWCC 2 cut(s) 531, 868
XapI RAATTY 1 cut(s) 755
XmiI GTMKAC 1 cut(s) 768
XmnI GAANNNNTTC 1 cut(s) 878
XspI CTAG 1 cut(s) 338
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.