Regulation of nuclear pre-mRNA domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26990 AT3G26990 |
| fragaria_vesca | FvH4_6g53890 FvH4_6g53890 |
| malus_domestica | MD09G1007500.v1.1 MD17G1011400.v1.1 |
| prunus_persica | Prupe.3G309500_v2.0.a1 Prupe.3G309500_v2.0.a1 Prupe.3G309500_v2.0.a1 |
| pyrus_communis | pycom111g00580 pycom17g00610 |
| rosa_chinensis | RchiOBHm_Chr2g0176051 |
| rosa_laevigata | RLG00000022376 |
| rosa_multiflora | Rmu_sc0033063.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076820 |
| rosa_rugosa | Rorug02G0590000 |
| rosa_samantha | Rh2AG668800 Rh2BG680400 Rh2CG643300 Rh2DG694100 |
| rosa_wichuraiana | Rw2G054850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 470 |
| Acc36I | ACCTGC | 1 cut(s) | 931 |
| AccB1I | GGYRCC | 3 cut(s) | 434, 1258, 1444 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1424 |
| AccBSI | CCGCTC | 1 cut(s) | 155 |
| AccII | CGCG | 1 cut(s) | 273 |
| AciI | CCGC | 7 cut(s) | 20, 153, 771, 899, 985, 1023, 1211 |
| AclWI | GGATC | 3 cut(s) | 613, 753, 974 |
| AcsI | RAATTY | 6 cut(s) | 242, 296, 369, 734, 1453, 1487 |
| AcuI | CTGAAG | 2 cut(s) | 707, 749 |
| AcvI | CACGTG | 1 cut(s) | 161 |
| AcyI | GRCGYC | 1 cut(s) | 1520 |
| AfaI | GTAC | 6 cut(s) | 10, 645, 932, 1173, 1311, 1350 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 766, 1134, 1424 |
| AgsI | TTSAA | 8 cut(s) | 128, 284, 586, 629, 662, 687, 739, 820 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1159 |
| AjnI | CCWGG | 2 cut(s) | 399, 1068 |
| AleI | CACNNNNGTG | 1 cut(s) | 88 |
| Alw21I | GWGCWC | 4 cut(s) | 857, 1062, 1184, 1417 |
| Alw26I | GTCTC | 3 cut(s) | 68, 478, 750 |
| AlwI | GGATC | 3 cut(s) | 613, 753, 974 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1001 |
| Ama87I | CYCGRG | 2 cut(s) | 360, 1145 |
| AoxI | GGCC | 3 cut(s) | 768, 792, 1136 |
| ApeKI | GCWGC | 6 cut(s) | 311, 842, 995, 998, 1001, 1010 |
| ApoI | RAATTY | 6 cut(s) | 242, 296, 369, 734, 1453, 1487 |
| AseI | ATTAAT | 1 cut(s) | 411 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 223, 267, 720 |
| AspLEI | GCGC | 1 cut(s) | 1346 |
| AsuHPI | GGTGA | 3 cut(s) | 251, 590, 1127 |
| AsuNHI | GCTAGC | 1 cut(s) | 40 |
| AvaI | CYCGRG | 2 cut(s) | 360, 1145 |
| BanI | GGYRCC | 3 cut(s) | 434, 1258, 1444 |
| BanII | GRGCYC | 3 cut(s) | 857, 1184, 1417 |
| BbrPI | CACGTG | 1 cut(s) | 161 |
| BbsI | GAAGAC | 1 cut(s) | 516 |
| Bbv12I | GWGCWC | 4 cut(s) | 857, 1062, 1184, 1417 |
| BbvCI | CCTCAGC | 1 cut(s) | 1036 |
| BbvI | GCAGC | 6 cut(s) | 323, 854, 985, 988, 1007, 1022 |
| BccI | CCATC | 7 cut(s) | 496, 816, 1198, 1204, 1214, 1279, 1475 |
| BciT130I | CCWGG | 2 cut(s) | 401, 1070 |
| BcoDI | GTCTC | 3 cut(s) | 68, 478, 750 |
| BfaI | CTAG | 4 cut(s) | 41, 138, 1251, 1530 |
| BfmI | CTRYAG | 4 cut(s) | 876, 993, 1002, 1360 |
| BfoI | RGCGCY | 1 cut(s) | 1347 |
| BfuAI | ACCTGC | 1 cut(s) | 931 |
| BisI | GCNGC | 7 cut(s) | 312, 771, 843, 996, 999, 1002, 1011 |
| BlsI | GCNGC | 7 cut(s) | 313, 772, 844, 997, 1000, 1003, 1012 |
| Bme1390I | CCNGG | 2 cut(s) | 401, 1070 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1159 |
| BmeT110I | CYCGRG | 2 cut(s) | 360, 1145 |
| BmiI | GGNNCC | 4 cut(s) | 436, 945, 1260, 1446 |
| BmrFI | CCNGG | 2 cut(s) | 401, 1070 |
| BmrI | ACTGGG | 2 cut(s) | 775, 1316 |
| BmsI | GCATC | 3 cut(s) | 1034, 1035, 1082 |
| BmtI | GCTAGC | 1 cut(s) | 44 |
| BmuI | ACTGGG | 2 cut(s) | 775, 1316 |
| BpiI | GAAGAC | 1 cut(s) | 516 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 703, 735 |
| BpmI | CTGGAG | 2 cut(s) | 906, 1401 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1036, 1140 |
| BpuEI | CTTGAG | 2 cut(s) | 359, 572 |
| BsaAI | YACGTR | 1 cut(s) | 161 |
| BsaHI | GRCGYC | 1 cut(s) | 1520 |
| BsaI | GGTCTC | 1 cut(s) | 750 |
| BsaJI | CCNNGG | 1 cut(s) | 1068 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1404, 1434 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 766, 1134, 1424 |
| Bse1I | ACTGG | 6 cut(s) | 327, 781, 923, 1307, 1322, 1418 |
| Bse3DI | GCAATG | 1 cut(s) | 1289 |
| BseBI | CCWGG | 2 cut(s) | 401, 1070 |
| BseDI | CCNNGG | 1 cut(s) | 1068 |
| BseGI | GGATG | 5 cut(s) | 343, 511, 982, 1206, 1505 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 766, 1134, 1424 |
| BseMI | GCAATG | 1 cut(s) | 1289 |
| BseMII | CTCAG | 4 cut(s) | 489, 638, 701, 1050 |
| BseNI | ACTGG | 6 cut(s) | 327, 781, 923, 1307, 1322, 1418 |
| BseRI | GAGGAG | 5 cut(s) | 635, 1054, 1191, 1257, 1272 |
| BseXI | GCAGC | 6 cut(s) | 323, 854, 985, 988, 1007, 1022 |
| BseYI | CCCAGC | 1 cut(s) | 1405 |
| Bsh1236I | CGCG | 1 cut(s) | 273 |
| BshFI | GGCC | 3 cut(s) | 770, 794, 1138 |
| BshNI | GGYRCC | 3 cut(s) | 434, 1258, 1444 |
| BsiHKAI | GWGCWC | 4 cut(s) | 857, 1062, 1184, 1417 |
| BsiHKCI | CYCGRG | 2 cut(s) | 360, 1145 |
| BslFI | GGGAC | 3 cut(s) | 665, 1208, 1312 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 766, 1134, 1424 |
| BsmAI | GTCTC | 3 cut(s) | 68, 478, 750 |
| BsmFI | GGGAC | 3 cut(s) | 665, 1208, 1312 |
| BsmI | GAATGC | 4 cut(s) | 427, 541, 643, 1213 |
| BsnI | GGCC | 3 cut(s) | 770, 794, 1138 |
| Bso31I | GGTCTC | 1 cut(s) | 750 |
| BsoBI | CYCGRG | 2 cut(s) | 360, 1145 |
| Bsp1286I | GDGCHC | 4 cut(s) | 857, 1062, 1184, 1417 |
| Bsp1407I | TGTACA | 1 cut(s) | 930 |
| Bsp143I | GATC | 3 cut(s) | 605, 745, 979 |
| Bsp68I | TCGCGA | 1 cut(s) | 273 |
| BspACI | CCGC | 7 cut(s) | 20, 153, 771, 899, 985, 1023, 1211 |
| BspANI | GGCC | 3 cut(s) | 770, 794, 1138 |
| BspCNI | CTCAG | 4 cut(s) | 488, 639, 702, 1049 |
| BspFNI | CGCG | 1 cut(s) | 273 |
| BspLI | GGNNCC | 4 cut(s) | 436, 945, 1260, 1446 |
| BspMAI | CTGCAG | 2 cut(s) | 997, 1006 |
| BspMI | ACCTGC | 1 cut(s) | 931 |
| BspOI | GCTAGC | 1 cut(s) | 44 |
| BspPI | GGATC | 3 cut(s) | 613, 753, 974 |
| BspQI | GCTCTTC | 2 cut(s) | 273, 726 |
| BspT107I | GGYRCC | 3 cut(s) | 434, 1258, 1444 |
| BspTNI | GGTCTC | 1 cut(s) | 750 |
| BsrBI | CCGCTC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 1289 |
| BsrGI | TGTACA | 1 cut(s) | 930 |
| BsrI | ACTGG | 6 cut(s) | 327, 781, 923, 1307, 1322, 1418 |
| BssECI | CCNNGG | 1 cut(s) | 1068 |
| BssMI | GATC | 3 cut(s) | 605, 745, 979 |
| BssNI | GRCGYC | 1 cut(s) | 1520 |
| Bst2UI | CCWGG | 2 cut(s) | 401, 1070 |
| Bst4CI | ACNGT | 2 cut(s) | 212, 656 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 726 |
| BstACI | GRCGYC | 1 cut(s) | 1520 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1001 |
| BstAUI | TGTACA | 1 cut(s) | 930 |
| BstBAI | YACGTR | 1 cut(s) | 161 |
| BstC8I | GCNNGC | 5 cut(s) | 42, 63, 67, 447, 792 |
| BstDEI | CTNAG | 5 cut(s) | 475, 647, 710, 1036, 1140 |
| BstF5I | GGATG | 5 cut(s) | 343, 511, 982, 1206, 1505 |
| BstFNI | CGCG | 1 cut(s) | 273 |
| BstH2I | RGCGCY | 1 cut(s) | 1347 |
| BstHHI | GCGC | 1 cut(s) | 1346 |
| BstKTI | GATC | 3 cut(s) | 608, 748, 982 |
| BstMAI | GTCTC | 3 cut(s) | 68, 478, 750 |
| BstMBI | GATC | 3 cut(s) | 605, 745, 979 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 46, 455, 1001, 1007, 1010, 1519 |
| BstNI | CCWGG | 2 cut(s) | 401, 1070 |
| BstSCI | CCNGG | 2 cut(s) | 399, 1068 |
| BstSFI | CTRYAG | 4 cut(s) | 876, 993, 1002, 1360 |
| BstUI | CGCG | 1 cut(s) | 273 |
| BstV1I | GCAGC | 6 cut(s) | 323, 854, 985, 988, 1007, 1022 |
| BstV2I | GAAGAC | 1 cut(s) | 516 |
| BstX2I | RGATCY | 1 cut(s) | 605 |
| BstYI | RGATCY | 1 cut(s) | 605 |
| BsuRI | GGCC | 3 cut(s) | 770, 794, 1138 |
| BtgZI | GCGATG | 1 cut(s) | 288 |
| BtsCI | GGATG | 5 cut(s) | 343, 511, 982, 1206, 1505 |
| BtsI | GCAGTG | 1 cut(s) | 1011 |
| BtsIMutI | CAGTG | 2 cut(s) | 1011, 1329 |
| BtuMI | TCGCGA | 1 cut(s) | 273 |
| BveI | ACCTGC | 1 cut(s) | 931 |
| Cac8I | GCNNGC | 5 cut(s) | 42, 63, 67, 447, 792 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1001 |
| CfoI | GCGC | 1 cut(s) | 1346 |
| CseI | GACGC | 1 cut(s) | 1528 |
| Csp6I | GTAC | 6 cut(s) | 9, 644, 931, 1172, 1310, 1349 |
| CviAII | CATG | 6 cut(s) | 132, 602, 968, 1366, 1441, 1510 |
| CviQI | GTAC | 6 cut(s) | 9, 644, 931, 1172, 1310, 1349 |
| DdeI | CTNAG | 5 cut(s) | 475, 647, 710, 1036, 1140 |
| DpnI | GATC | 3 cut(s) | 607, 747, 981 |
| DpnII | GATC | 3 cut(s) | 605, 745, 979 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 470 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1159 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 470 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 726 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1159 |
| EarI | CTCTTC | 2 cut(s) | 273, 726 |
| Ecl136II | GAGCTC | 3 cut(s) | 855, 1182, 1415 |
| Eco147I | AGGCCT | 1 cut(s) | 1138 |
| Eco24I | GRGCYC | 3 cut(s) | 857, 1184, 1417 |
| Eco31I | GGTCTC | 1 cut(s) | 750 |
| Eco53kI | GAGCTC | 3 cut(s) | 855, 1182, 1415 |
| Eco57I | CTGAAG | 2 cut(s) | 707, 749 |
| Eco72I | CACGTG | 1 cut(s) | 161 |
| Eco88I | CYCGRG | 2 cut(s) | 360, 1145 |
| EcoICRI | GAGCTC | 3 cut(s) | 855, 1182, 1415 |
| EcoRI | GAATTC | 1 cut(s) | 734 |
| EcoRII | CCWGG | 2 cut(s) | 399, 1068 |
| EcoT38I | GRGCYC | 3 cut(s) | 857, 1184, 1417 |
| FaeI | CATG | 6 cut(s) | 135, 605, 971, 1369, 1444, 1513 |
| FaqI | GGGAC | 3 cut(s) | 665, 1208, 1312 |
| FatI | CATG | 6 cut(s) | 131, 601, 967, 1365, 1440, 1509 |
| FauI | CCCGC | 2 cut(s) | 992, 1218 |
| FauNDI | CATATG | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 7 cut(s) | 312, 771, 843, 996, 999, 1002, 1011 |
| FokI | GGATG | 5 cut(s) | 350, 518, 989, 1193, 1492 |
| FriOI | GRGCYC | 3 cut(s) | 857, 1184, 1417 |
| Fsp4HI | GCNGC | 7 cut(s) | 312, 771, 843, 996, 999, 1002, 1011 |
| FspBI | CTAG | 4 cut(s) | 41, 138, 1251, 1530 |
| GlaI | GCGC | 1 cut(s) | 1345 |
| GluI | GCNGC | 7 cut(s) | 312, 771, 843, 996, 999, 1002, 1011 |
| GsaI | CCCAGC | 1 cut(s) | 1409 |
| GsuI | CTGGAG | 2 cut(s) | 906, 1401 |
| HaeII | RGCGCY | 1 cut(s) | 1347 |
| HaeIII | GGCC | 3 cut(s) | 770, 794, 1138 |
| HgaI | GACGC | 1 cut(s) | 1528 |
| HhaI | GCGC | 1 cut(s) | 1346 |
| Hin1I | GRCGYC | 1 cut(s) | 1520 |
| Hin1II | CATG | 6 cut(s) | 135, 605, 971, 1369, 1444, 1513 |
| Hin6I | GCGC | 1 cut(s) | 1344 |
| HinP1I | GCGC | 1 cut(s) | 1344 |
| HinfI | GANTC | 1 cut(s) | 680 |
| HphI | GGTGA | 3 cut(s) | 251, 590, 1127 |
| Hpy166II | GTNNAC | 1 cut(s) | 933 |
| Hpy188I | TCNGA | 7 cut(s) | 229, 478, 755, 787, 1078, 1464, 1480 |
| Hpy188III | TCNNGA | 7 cut(s) | 260, 272, 551, 687, 725, 953, 1147 |
| Hpy8I | GTNNAC | 1 cut(s) | 933 |
| HpyAV | CCTTC | 4 cut(s) | 244, 550, 1119, 1447 |
| HpyCH4III | ACNGT | 2 cut(s) | 212, 656 |
| HpyCH4IV | ACGT | 2 cut(s) | 160, 1031 |
| HpyCH4V | TGCA | 9 cut(s) | 93, 191, 311, 458, 835, 995, 1004, 1339, 1513 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 46, 455, 1001, 1007, 1010, 1519 |
| HpyF3I | CTNAG | 5 cut(s) | 475, 647, 710, 1036, 1140 |
| HpySE526I | ACGT | 2 cut(s) | 160, 1031 |
| Hsp92I | GRCGYC | 1 cut(s) | 1520 |
| Hsp92II | CATG | 6 cut(s) | 135, 605, 971, 1369, 1444, 1513 |
| HspAI | GCGC | 1 cut(s) | 1344 |
| Kzo9I | GATC | 3 cut(s) | 605, 745, 979 |
| LguI | GCTCTTC | 2 cut(s) | 273, 726 |
| LmnI | GCTCC | 5 cut(s) | 160, 727, 925, 1412, 1420 |
| Lsp1109I | GCAGC | 6 cut(s) | 323, 854, 985, 988, 1007, 1022 |
| LweI | GCATC | 3 cut(s) | 1034, 1035, 1082 |
| MaeI | CTAG | 4 cut(s) | 41, 138, 1251, 1530 |
| MaeII | ACGT | 2 cut(s) | 160, 1031 |
| MalI | GATC | 3 cut(s) | 607, 747, 981 |
| MbiI | CCGCTC | 1 cut(s) | 155 |
| MboI | GATC | 3 cut(s) | 605, 745, 979 |
| MboII | GAAGA | 7 cut(s) | 248, 260, 315, 521, 675, 713, 1269 |
| MflI | RGATCY | 1 cut(s) | 605 |
| MhlI | GDGCHC | 4 cut(s) | 857, 1062, 1184, 1417 |
| MmeI | TCCRAC | 1 cut(s) | 723 |
| MroXI | GAANNNNTTC | 3 cut(s) | 223, 267, 720 |
| MseI | TTAA | 3 cut(s) | 15, 411, 1101 |
| MslI | CAYNNNNRTG | 4 cut(s) | 88, 432, 1218, 1514 |
| MspA1I | CMGCKG | 1 cut(s) | 998 |
| MspR9I | CCNGG | 2 cut(s) | 401, 1070 |
| Mva1269I | GAATGC | 4 cut(s) | 427, 541, 643, 1213 |
| MvaI | CCWGG | 2 cut(s) | 401, 1070 |
| MvnI | CGCG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 46, 455, 1001, 1007, 1010, 1519 |
| NdeI | CATATG | 1 cut(s) | 102 |
| NdeII | GATC | 3 cut(s) | 605, 745, 979 |
| NheI | GCTAGC | 1 cut(s) | 40 |
| NlaIII | CATG | 6 cut(s) | 135, 605, 971, 1369, 1444, 1513 |
| NlaIV | GGNNCC | 4 cut(s) | 436, 945, 1260, 1446 |
| NruI | TCGCGA | 1 cut(s) | 273 |
| OliI | CACNNNNGTG | 1 cut(s) | 88 |
| PaeR7I | CTCGAG | 1 cut(s) | 1145 |
| PceI | AGGCCT | 1 cut(s) | 1138 |
| PciSI | GCTCTTC | 2 cut(s) | 273, 726 |
| PctI | GAATGC | 4 cut(s) | 427, 541, 643, 1213 |
| PdmI | GAANNNNTTC | 3 cut(s) | 223, 267, 720 |
| PfeI | GAWTC | 1 cut(s) | 680 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1424 |
| PkrI | GCNGC | 7 cut(s) | 313, 772, 844, 997, 1000, 1003, 1012 |
| PmaCI | CACGTG | 1 cut(s) | 161 |
| PmlI | CACGTG | 1 cut(s) | 161 |
| Ppu21I | YACGTR | 1 cut(s) | 161 |
| PshBI | ATTAAT | 1 cut(s) | 411 |
| Psp124BI | GAGCTC | 3 cut(s) | 857, 1184, 1417 |
| Psp6I | CCWGG | 2 cut(s) | 399, 1068 |
| PspCI | CACGTG | 1 cut(s) | 161 |
| PspFI | CCCAGC | 1 cut(s) | 1405 |
| PspGI | CCWGG | 2 cut(s) | 399, 1068 |
| PspN4I | GGNNCC | 4 cut(s) | 436, 945, 1260, 1446 |
| PstI | CTGCAG | 2 cut(s) | 997, 1006 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1001 |
| PsuI | RGATCY | 1 cut(s) | 605 |
| PvuII | CAGCTG | 1 cut(s) | 998 |
| RruI | TCGCGA | 1 cut(s) | 273 |
| RsaI | GTAC | 6 cut(s) | 10, 645, 932, 1173, 1311, 1350 |
| RsaNI | GTAC | 6 cut(s) | 9, 644, 931, 1172, 1310, 1349 |
| RseI | CAYNNNNRTG | 4 cut(s) | 88, 432, 1218, 1514 |
| SacI | GAGCTC | 3 cut(s) | 857, 1184, 1417 |
| SapI | GCTCTTC | 2 cut(s) | 273, 726 |
| SaqAI | TTAA | 3 cut(s) | 15, 411, 1101 |
| SatI | GCNGC | 7 cut(s) | 312, 771, 843, 996, 999, 1002, 1011 |
| Sau3AI | GATC | 3 cut(s) | 605, 745, 979 |
| ScrFI | CCNGG | 2 cut(s) | 401, 1070 |
| SduI | GDGCHC | 4 cut(s) | 857, 1062, 1184, 1417 |
| SfaNI | GCATC | 3 cut(s) | 1034, 1035, 1082 |
| SfcI | CTRYAG | 4 cut(s) | 876, 993, 1002, 1360 |
| Sfr274I | CTCGAG | 1 cut(s) | 1145 |
| SlaI | CTCGAG | 1 cut(s) | 1145 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 88, 432, 1218, 1514 |
| SmlI | CTYRAG | 3 cut(s) | 374, 551, 1145 |
| SmoI | CTYRAG | 3 cut(s) | 374, 551, 1145 |
| SseBI | AGGCCT | 1 cut(s) | 1138 |
| SsiI | CCGC | 7 cut(s) | 20, 153, 771, 899, 985, 1023, 1211 |
| SspI | AATATT | 1 cut(s) | 409 |
| SspMI | CTAG | 4 cut(s) | 41, 138, 1251, 1530 |
| SstI | GAGCTC | 3 cut(s) | 857, 1184, 1417 |
| StuI | AGGCCT | 1 cut(s) | 1138 |
| StyD4I | CCNGG | 2 cut(s) | 399, 1068 |
| TaaI | ACNGT | 2 cut(s) | 212, 656 |
| TaiI | ACGT | 2 cut(s) | 163, 1034 |
| TaqI | TCGA | 1 cut(s) | 1146 |
| TatI | WGTACW | 3 cut(s) | 8, 643, 930 |
| TauI | GCSGC | 1 cut(s) | 773 |
| TfiI | GAWTC | 1 cut(s) | 680 |
| Tru1I | TTAA | 3 cut(s) | 15, 411, 1101 |
| Tru9I | TTAA | 3 cut(s) | 15, 411, 1101 |
| TscAI | CASTG | 2 cut(s) | 1011, 1329 |
| TseI | GCWGC | 6 cut(s) | 311, 842, 995, 998, 1001, 1010 |
| TspDTI | ATGAA | 6 cut(s) | 119, 137, 309, 522, 590, 1429 |
| TspRI | CASTG | 2 cut(s) | 1011, 1329 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1424 |
| VspI | ATTAAT | 1 cut(s) | 411 |
| XapI | RAATTY | 6 cut(s) | 242, 296, 369, 734, 1453, 1487 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 491 |
| XhoI | CTCGAG | 1 cut(s) | 1145 |
| XmnI | GAANNNNTTC | 3 cut(s) | 223, 267, 720 |
| XspI | CTAG | 4 cut(s) | 41, 138, 1251, 1530 |