Prupe.3G312600_v2.0.a1

Phosphoglycerate mutase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
27071117 .. 27075186
4070 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G312600.1

Sequence Viewer

Length: 1293 bp
ATGGGTGCCACCCAGTCCGTACAAGTGGTCGAAGAAAGCGAAGAAGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGGAGAAGAGAACGATATTGGTGAGCCCATTAGAAGTGAACTGGACAAGGATTTGATCAAGAAGGTTCTAGAACAAGAACCCGAGATGCTTTGCCACGCATCCGCATCGCCGCTCTCGCCTCAGCTCTCCTCATTGGGCACCCCGCGCCTCGGGCCCTCCATCAAGGTCTGGGACCCTTACAACGTCCTCGCTCCTCCTCCGCCTCTTCTGCCGCCGCCTCAGGGCTTCTCCCGAAGCTTCTCCTTGAGTTCCAATGCCATGGAGGACGACCGCTTCATGACGGAGGTCTTTTTGATTAGTCACGGCGAGTGCGAGTTGAATTTGCGGCCCGATTTGGTGGGCGGCCGCTGCCCTCAGGCGGCTTTGACCCCCAATGGGAAGCGGCAAGCCAGGGCCTTGGCGGTGTTCTTGAATTCCCAGAGGGTCAGCTTCAATGCCGTTTACACCTCCCCTTTGGATCGTGCGCGCTCAATGGCGGTTTCCGTCTGTCAGGAAATGAACTTTCCAGTGGAACAGATACAAGCGTCGGATGCACTTGCAGAGATGAGTCAGGGGGATTGGGAGGGGTGCCCCCGGTCAGAAATATACACAGCTGAACTTTTGAGCTTCATTGACAGGGTTCAGCCTGATTTCTCTGCACCATCAGGAGAGTCACTTAGACAAGTGGAATTTCAAATGGTTCAATTTTTAAACGGGACAGTTCTGGGGCTTACTGAAAAGTTAAGAGCGTACTTCTCTTTCTCGTCACACAATCAGAATGAGAGCCAAGGATTTTCACACCATAATTCTCATGTTTTAACCAACTCAATTCATGACCGAGAAGGGTCTTCTCTCCCACCACCTCAATGGGATCTGCTTCACAGGCAGCGGCAGGGGCTCTTAAGGAAAAAATCTGGTAAGAGCCGGCTACAAGTGGTGACTACAACCGGAGATCAGGAGGTTGAGGATGAGATTTCCCCTCGGGAAGTCAATCACCAAAGTTCCCCACATGATTTAAGTGGCAGGAGCTCCTCTTCTGTGTCTTGTATTGGCATCTTCAGTCATGCAGTGCCAATCAAGTGTCTCCTCACAGGCATCCTTGGATGTAGCCCATTAATGTCACATAAGATTTGCATAGAGGATTCTTCGGTGACAGTTTTGCAGCATTCATGGAGAACAGGTTGGCAGATAAAAAGGTTGAATGATACTGCACACCTCAGGCTTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

431

Amino Acids

47.86

Weight (kDa)

4.96

Isoelectric Point (pI)

66.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012251)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 5, 221, 651
AccBSI CCGCTC 1 cut(s) 196
AccII CGCG 2 cut(s) 229, 550
AclWI GGATC 2 cut(s) 549, 942
AcoI YGGCCR 1 cut(s) 427
AcsI RAATTY 3 cut(s) 403, 496, 752
AcuI CTGAAG 1 cut(s) 1105
AfaI GTAC 2 cut(s) 21, 815
AfiI CCNNNNNNNGG 4 cut(s) 233, 305, 442, 459
AflII CTTAAG 1 cut(s) 964
AgsI TTSAA 6 cut(s) 403, 496, 517, 758, 767, 1264
AjnI CCWGG 1 cut(s) 473
AluBI AGCT 6 cut(s) 208, 321, 513, 677, 690, 1092
AluI AGCT 6 cut(s) 208, 321, 513, 677, 690, 1092
Alw21I GWGCWC 1 cut(s) 1094
Alw26I GTCTC 1 cut(s) 1151
AlwI GGATC 2 cut(s) 549, 942
Ama87I CYCGRG 3 cut(s) 164, 233, 1044
AoxI GGCC 4 cut(s) 236, 410, 427, 477
ApaI GGGCCC 1 cut(s) 240
ApeKI GCWGC 3 cut(s) 432, 949, 1225
ApoI RAATTY 3 cut(s) 403, 496, 752
AseI ATTAAT 1 cut(s) 1178
AspLEI GCGC 3 cut(s) 231, 550, 552
AspS9I GGNCC 5 cut(s) 236, 237, 256, 411, 477
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 4 cut(s) 116, 1012, 1049, 1225
AvaI CYCGRG 3 cut(s) 164, 233, 1044
AvaII GGWCC 1 cut(s) 256
AxyI CCTNAGG 3 cut(s) 303, 438, 1280
BaeGI GKGCMC 3 cut(s) 224, 240, 656
BaeI ACNNNNGTAYC 2 cut(s) 593, 626
BanI GGYRCC 3 cut(s) 5, 221, 651
BanII GRGCYC 4 cut(s) 111, 240, 963, 1094
BbsI GAAGAC 2 cut(s) 51, 903
Bbv12I GWGCWC 1 cut(s) 1094
BbvCI CCTCAGC 1 cut(s) 204
BbvI GCAGC 3 cut(s) 419, 961, 1237
BccI CCATC 2 cut(s) 251, 733
BceAI ACGGC 2 cut(s) 403, 506
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 1 cut(s) 475
BclI TGATCA 1 cut(s) 138
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 1 cut(s) 1151
BfaI CTAG 1 cut(s) 152
BfrI CTTAAG 1 cut(s) 964
Bme1390I CCNGG 2 cut(s) 475, 658
Bme18I GGWCC 1 cut(s) 256
BmeT110I CYCGRG 3 cut(s) 164, 233, 1044
BmgT120I GGNCC 5 cut(s) 236, 237, 256, 411, 477
BmiI GGNNCC 6 cut(s) 7, 223, 238, 257, 258, 653
BmrFI CCNGG 2 cut(s) 475, 658
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 6 cut(s) 159, 191, 197, 604, 1125, 1167
BmuI ACTGGG 1 cut(s) 7
BoxI GACNNNNGTC 1 cut(s) 368
BpiI GAAGAC 2 cut(s) 51, 903
Bpu10I CCTNAGC 1 cut(s) 204
BpuEI CTTGAG 1 cut(s) 349
BpuMI CCSGG 1 cut(s) 658
BsaJI CCNNGG 8 cut(s) 232, 342, 474, 480, 656, 850, 1043, 1162
BsaWI WCCGGW 1 cut(s) 1010
BsaXI ACNNNNNCTCC 2 cut(s) 1228, 1258
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 305, 442, 459
Bse118I RCCGGY 1 cut(s) 987
Bse1I ACTGG 3 cut(s) 13, 129, 590
Bse21I CCTNAGG 3 cut(s) 303, 438, 1280
BseBI CCWGG 1 cut(s) 475
BseDI CCNNGG 8 cut(s) 232, 342, 474, 480, 656, 850, 1043, 1162
BseGI GGATG 5 cut(s) 182, 619, 1036, 1158, 1172
BseLI CCNNNNNNNGG 4 cut(s) 233, 305, 442, 459
BseMII CTCAG 3 cut(s) 218, 317, 452
BseNI ACTGG 3 cut(s) 13, 129, 590
BsePI GCGCGC 1 cut(s) 548
BseRI GAGGAG 5 cut(s) 202, 267, 270, 1084, 1139
BseSI GKGCMC 3 cut(s) 224, 240, 656
BseX3I CGGCCG 1 cut(s) 427
BseXI GCAGC 3 cut(s) 419, 961, 1237
BsgI GTGCAG 2 cut(s) 705, 1257
Bsh1236I CGCG 2 cut(s) 229, 550
Bsh1285I CGRYCG 2 cut(s) 355, 430
BshFI GGCC 4 cut(s) 238, 412, 429, 479
BshNI GGYRCC 3 cut(s) 5, 221, 651
BsiEI CGRYCG 2 cut(s) 355, 430
BsiHKAI GWGCWC 1 cut(s) 1094
BsiHKCI CYCGRG 3 cut(s) 164, 233, 1044
BsiSI CCGG 3 cut(s) 658, 988, 1011
BslFI GGGAC 2 cut(s) 269, 793
BslI CCNNNNNNNGG 4 cut(s) 233, 305, 442, 459
BsmAI GTCTC 1 cut(s) 1151
BsmFI GGGAC 2 cut(s) 269, 793
BsmI GAATGC 1 cut(s) 1228
BsnI GGCC 4 cut(s) 238, 412, 429, 479
BsoBI CYCGRG 3 cut(s) 164, 233, 1044
Bsp120I GGGCCC 1 cut(s) 236
Bsp1286I GDGCHC 6 cut(s) 111, 224, 240, 656, 963, 1094
Bsp143I GATC 4 cut(s) 138, 541, 934, 1015
Bsp19I CCATGG 1 cut(s) 342
BspANI GGCC 4 cut(s) 238, 412, 429, 479
BspCNI CTCAG 4 cut(s) 217, 316, 451, 1293
BspFNI CGCG 2 cut(s) 229, 550
BspHI TCATGA 2 cut(s) 360, 895
BspLI GGNNCC 6 cut(s) 7, 223, 238, 257, 258, 653
BspPI GGATC 2 cut(s) 549, 942
BspT107I GGYRCC 3 cut(s) 5, 221, 651
BspTI CTTAAG 1 cut(s) 964
BsrBI CCGCTC 1 cut(s) 196
BsrFI RCCGGY 1 cut(s) 987
BsrI ACTGG 3 cut(s) 13, 129, 590
BssAI RCCGGY 1 cut(s) 987
BssECI CCNNGG 8 cut(s) 232, 342, 474, 480, 656, 850, 1043, 1162
BssHII GCGCGC 1 cut(s) 548
BssMI GATC 4 cut(s) 138, 541, 934, 1015
BssT1I CCWWGG 4 cut(s) 342, 480, 850, 1162
Bst2UI CCWGG 1 cut(s) 475
Bst4CI ACNGT 2 cut(s) 784, 1219
Bst6I CTCTTC 4 cut(s) 72, 84, 294, 1102
BstAFI CTTAAG 1 cut(s) 964
BstC8I GCNNGC 3 cut(s) 471, 550, 989
BstDEI CTNAG 5 cut(s) 204, 303, 438, 740, 1280
BstDSI CCRYGG 1 cut(s) 342
BstF5I GGATG 5 cut(s) 182, 619, 1036, 1158, 1172
BstFNI CGCG 2 cut(s) 229, 550
BstHHI GCGC 3 cut(s) 231, 550, 552
BstKTI GATC 4 cut(s) 141, 544, 937, 1018
BstMAI GTCTC 1 cut(s) 1151
BstMBI GATC 4 cut(s) 138, 541, 934, 1015
BstMCI CGRYCG 2 cut(s) 355, 430
BstMWI GCNNNNNNNGC 8 cut(s) 199, 228, 235, 292, 432, 614, 946, 958
BstNI CCWGG 1 cut(s) 475
BstPAI GACNNNNGTC 1 cut(s) 368
BstSCI CCNGG 2 cut(s) 473, 656
BstSLI GKGCMC 3 cut(s) 224, 240, 656
BstUI CGCG 2 cut(s) 229, 550
BstV1I GCAGC 3 cut(s) 419, 961, 1237
BstV2I GAAGAC 2 cut(s) 51, 903
BstX2I RGATCY 1 cut(s) 934
BstXI CCANNNNNNTGG 3 cut(s) 343, 481, 930
BstYI RGATCY 1 cut(s) 934
BstZI CGGCCG 1 cut(s) 427
Bsu36I CCTNAGG 3 cut(s) 303, 438, 1280
BsuRI GGCC 4 cut(s) 238, 412, 429, 479
BtgI CCRYGG 1 cut(s) 342
BtgZI GCGATG 1 cut(s) 174
BtsCI GGATG 5 cut(s) 182, 619, 1036, 1158, 1172
BtsI GCAGTG 1 cut(s) 1137
BtsIMutI CAGTG 2 cut(s) 597, 1137
Cac8I GCNNGC 3 cut(s) 471, 550, 989
CciI TCATGA 2 cut(s) 360, 895
CciNI GCGGCCGC 1 cut(s) 427
CfoI GCGC 3 cut(s) 231, 550, 552
Cfr10I RCCGGY 1 cut(s) 987
Cfr13I GGNCC 5 cut(s) 236, 237, 256, 411, 477
CseI GACGC 1 cut(s) 597
Csp6I GTAC 2 cut(s) 20, 814
CviAII CATG 7 cut(s) 343, 361, 875, 896, 1073, 1127, 1233
CviQI GTAC 2 cut(s) 20, 814
DdeI CTNAG 5 cut(s) 204, 303, 438, 740, 1280
DpnI GATC 4 cut(s) 140, 543, 936, 1017
DpnII GATC 4 cut(s) 138, 541, 934, 1015
DraI TTTAAA 1 cut(s) 774
EaeI YGGCCR 1 cut(s) 427
EagI CGGCCG 1 cut(s) 427
Eam1104I CTCTTC 4 cut(s) 72, 84, 294, 1102
EarI CTCTTC 4 cut(s) 72, 84, 294, 1102
EciI GGCGGA 1 cut(s) 273
Ecl136II GAGCTC 1 cut(s) 1092
EclXI CGGCCG 1 cut(s) 427
Eco130I CCWWGG 4 cut(s) 342, 480, 850, 1162
Eco24I GRGCYC 4 cut(s) 111, 240, 963, 1094
Eco47I GGWCC 1 cut(s) 256
Eco52I CGGCCG 1 cut(s) 427
Eco53kI GAGCTC 1 cut(s) 1092
Eco57I CTGAAG 1 cut(s) 1105
Eco81I CCTNAGG 3 cut(s) 303, 438, 1280
Eco88I CYCGRG 3 cut(s) 164, 233, 1044
EcoICRI GAGCTC 1 cut(s) 1092
EcoO109I RGGNCCY 3 cut(s) 237, 256, 477
EcoRI GAATTC 1 cut(s) 496
EcoRII CCWGG 1 cut(s) 473
EcoT14I CCWWGG 4 cut(s) 342, 480, 850, 1162
EcoT38I GRGCYC 4 cut(s) 111, 240, 963, 1094
ErhI CCWWGG 4 cut(s) 342, 480, 850, 1162
FaeI CATG 7 cut(s) 346, 364, 878, 899, 1076, 1130, 1236
FaqI GGGAC 2 cut(s) 269, 793
FatI CATG 7 cut(s) 342, 360, 874, 895, 1072, 1126, 1232
FauI CCCGC 1 cut(s) 234
FbaI TGATCA 1 cut(s) 138
FokI GGATG 5 cut(s) 169, 626, 1043, 1145, 1179
FriOI GRGCYC 4 cut(s) 111, 240, 963, 1094
FspBI CTAG 1 cut(s) 152
GlaI GCGC 3 cut(s) 230, 549, 551
HaeIII GGCC 4 cut(s) 238, 412, 429, 479
HapII CCGG 3 cut(s) 658, 988, 1011
HgaI GACGC 1 cut(s) 597
HhaI GCGC 3 cut(s) 231, 550, 552
Hin1II CATG 7 cut(s) 346, 364, 878, 899, 1076, 1130, 1236
Hin6I GCGC 3 cut(s) 229, 548, 550
HinP1I GCGC 3 cut(s) 229, 548, 550
HindIII AAGCTT 1 cut(s) 319
HinfI GANTC 3 cut(s) 631, 734, 1205
HpaII CCGG 3 cut(s) 658, 988, 1011
HphI GGTGA 4 cut(s) 116, 1012, 1049, 1225
Hpy166II GTNNAC 2 cut(s) 122, 526
Hpy188I TCNGA 3 cut(s) 613, 664, 840
Hpy8I GTNNAC 2 cut(s) 122, 526
Hpy99I CGWCG 1 cut(s) 613
HpyAV CCTTC 3 cut(s) 77, 139, 899
HpyCH4III ACNGT 2 cut(s) 784, 1219
HpyCH4IV ACGT 1 cut(s) 267
HpyCH4V TGCA 7 cut(s) 617, 623, 722, 1130, 1197, 1225, 1274
HpyF10VI GCNNNNNNNGC 8 cut(s) 199, 228, 235, 292, 432, 614, 946, 958
HpyF3I CTNAG 5 cut(s) 204, 303, 438, 740, 1280
HpySE526I ACGT 1 cut(s) 267
Hsp92II CATG 7 cut(s) 346, 364, 878, 899, 1076, 1130, 1236
HspAI GCGC 3 cut(s) 229, 548, 550
KflI GGGWCCC 1 cut(s) 256
KroI GCCGGC 1 cut(s) 987
KroNI GCCGGC 1 cut(s) 989
Ksp22I TGATCA 1 cut(s) 138
Kzo9I GATC 4 cut(s) 138, 541, 934, 1015
LmnI GCTCC 3 cut(s) 280, 1089, 1097
Lsp1109I GCAGC 3 cut(s) 419, 961, 1237
LweI GCATC 6 cut(s) 159, 191, 197, 604, 1125, 1167
MaeI CTAG 1 cut(s) 152
MaeII ACGT 1 cut(s) 267
MaeIII GTNAC 6 cut(s) 383, 735, 828, 1000, 1182, 1213
MalI GATC 4 cut(s) 140, 543, 936, 1017
MbiI CCGCTC 1 cut(s) 196
MboI GATC 4 cut(s) 138, 541, 934, 1015
MflI RGATCY 1 cut(s) 934
MhlI GDGCHC 6 cut(s) 111, 224, 240, 656, 963, 1094
MluCI AATT 6 cut(s) 403, 496, 752, 767, 868, 891
MlyI GAGTC 2 cut(s) 640, 743
MmeI TCCRAC 1 cut(s) 591
MroNI GCCGGC 1 cut(s) 987
MseI TTAA 6 cut(s) 773, 806, 881, 965, 1079, 1178
MslI CAYNNNNRTG 1 cut(s) 928
MspA1I CMGCKG 3 cut(s) 432, 677, 952
MspCI CTTAAG 1 cut(s) 964
MspI CCGG 3 cut(s) 658, 988, 1011
MspR9I CCNGG 2 cut(s) 475, 658
Mva1269I GAATGC 1 cut(s) 1228
MvaI CCWGG 1 cut(s) 475
MvnI CGCG 2 cut(s) 229, 550
MwoI GCNNNNNNNGC 8 cut(s) 199, 228, 235, 292, 432, 614, 946, 958
NaeI GCCGGC 1 cut(s) 989
NciI CCSGG 1 cut(s) 658
NcoI CCATGG 1 cut(s) 342
NdeII GATC 4 cut(s) 138, 541, 934, 1015
NgoMIV GCCGGC 1 cut(s) 987
NlaIII CATG 7 cut(s) 346, 364, 878, 899, 1076, 1130, 1236
NlaIV GGNNCC 6 cut(s) 7, 223, 238, 257, 258, 653
NmuCI GTSAC 6 cut(s) 383, 735, 828, 1000, 1182, 1213
NotI GCGGCCGC 1 cut(s) 427
PagI TCATGA 2 cut(s) 360, 895
PauI GCGCGC 1 cut(s) 548
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 393
PctI GAATGC 1 cut(s) 1228
PdiI GCCGGC 1 cut(s) 989
PfeI GAWTC 1 cut(s) 1205
PleI GAGTC 2 cut(s) 639, 742
PpsI GAGTC 2 cut(s) 639, 742
PpuMI RGGWCCY 1 cut(s) 256
PshAI GACNNNNGTC 1 cut(s) 368
PshBI ATTAAT 1 cut(s) 1178
Psp124BI GAGCTC 1 cut(s) 1094
Psp5II RGGWCCY 1 cut(s) 256
Psp6I CCWGG 1 cut(s) 473
PspGI CCWGG 1 cut(s) 473
PspN4I GGNNCC 6 cut(s) 7, 223, 238, 257, 258, 653
PspOMI GGGCCC 1 cut(s) 236
PspPI GGNCC 5 cut(s) 236, 237, 256, 411, 477
PspPPI RGGWCCY 1 cut(s) 256
PsuI RGATCY 1 cut(s) 934
PteI GCGCGC 1 cut(s) 548
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 2 cut(s) 21, 815
RsaNI GTAC 2 cut(s) 20, 814
RseI CAYNNNNRTG 1 cut(s) 928
SacI GAGCTC 1 cut(s) 1094
SaqAI TTAA 6 cut(s) 773, 806, 881, 965, 1079, 1178
Sau3AI GATC 4 cut(s) 138, 541, 934, 1015
Sau96I GGNCC 5 cut(s) 236, 237, 256, 411, 477
SchI GAGTC 2 cut(s) 640, 743
ScrFI CCNGG 2 cut(s) 475, 658
SduI GDGCHC 6 cut(s) 111, 224, 240, 656, 963, 1094
SfaNI GCATC 6 cut(s) 159, 191, 197, 604, 1125, 1167
SinI GGWCC 1 cut(s) 256
SmiMI CAYNNNNRTG 1 cut(s) 928
SmlI CTYRAG 2 cut(s) 328, 964
SmoI CTYRAG 2 cut(s) 328, 964
Sse9I AATT 6 cut(s) 403, 496, 752, 767, 868, 891
SspMI CTAG 1 cut(s) 152
SstI GAGCTC 1 cut(s) 1094
StyD4I CCNGG 2 cut(s) 473, 656
StyI CCWWGG 4 cut(s) 342, 480, 850, 1162
TaaI ACNGT 2 cut(s) 784, 1219
TaiI ACGT 1 cut(s) 270
TaqI TCGA 1 cut(s) 30
TaqII GACCGA 1 cut(s) 915
TasI AATT 6 cut(s) 403, 496, 752, 767, 868, 891
TauI GCSGC 9 cut(s) 196, 298, 301, 412, 429, 432, 446, 469, 955
TfiI GAWTC 1 cut(s) 1205
Tru1I TTAA 6 cut(s) 773, 806, 881, 965, 1079, 1178
Tru9I TTAA 6 cut(s) 773, 806, 881, 965, 1079, 1178
TscAI CASTG 2 cut(s) 597, 1137
TseFI GTSAC 6 cut(s) 383, 735, 828, 1000, 1182, 1213
TseI GCWGC 3 cut(s) 432, 949, 1225
Tsp45I GTSAC 6 cut(s) 383, 735, 828, 1000, 1182, 1213
TspDTI ATGAA 5 cut(s) 349, 596, 682, 884, 1221
TspGWI ACGGA 3 cut(s) 7, 380, 556
TspRI CASTG 2 cut(s) 597, 1137
Vha464I CTTAAG 1 cut(s) 964
VpaK11BI GGWCC 1 cut(s) 256
VspI ATTAAT 1 cut(s) 1178
XapI RAATTY 3 cut(s) 403, 496, 752
XbaI TCTAGA 1 cut(s) 151
XcmI CCANNNNNNNNNTGG 1 cut(s) 927
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.