Prupe.4G039700_v2.0.a1
MYB Family

bromo domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1861268 .. 1865128
3861 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G039700.1

Sequence Viewer

Length: 1443 bp
ATGGGGGCGGAGGTAATAGGAGGTAGCAGGTGGGGCACATGGCTGGAGCTCCTATTGGCCGGGGCCATCCTAAGACACGGAACCCGAGACTGGAACCAGGTGGCCGCGGAGCTCCGAGCCAGAACCGCTTGTCCGTACACTTTCACGCCCGAGGTGTGTAAAGCCAAATATAATGACTTACGAAAGCGATACTCTGGATGCAAGGCTTGGTTTGAAGATCTACGAAAGAAACGGATGGAAGAGTTGAGACAAGCTCTCAAAAAATCTGAGGACTCAATAGGATCTTTGGAATCAAAGCTTGAAACTCTCAAGGCGGAGAAAGGAGAAGATGGTTACAACAATTATGGCTCCACCCAGACAGAATCACCCGTTGCTTATCAAAAATCAGTGGGACATTACCCTTCTGCTAAAGAGGCATTTAAGGACGAGCCATCTGCTGGCAGTTTCACATGTGAAGCGTTGACAAGCTGCTCACCTGAATGCCAGATACCAGTTACAGAGTCAACTGAAGAAACAGAGACTAAAAGAGAAGCTTCACACTCTTCCGAGCATGAGAAAATCTCAAGCATGGAGAAGTTGGTAGGAACTTTGTATGTAGGAGTAGGACTAGGAGGGAATCTGAGAAAGAGACGGGGTAAGAGGAAGAGGAAGGATTGTACTAGTAGGGATGTTAAGGAAGCCAGCATTGGAGAAAGTCGCCTTTTGGATTCTCCTGATGCTGTAACTGCCTTGCGGTGTATAGAAAATTCAAACAGCGAATGTCGTGAGGAATTTGCCTCTTCTGGTGCGGGTGATTGTAATAGAAGTTCGACCAAGAATGAAACTGACCATCTGTGGAACGTTTTCAATTCATTTTTGGAGCATAAAAGTGCCTCTGTCTTTCGTCATCGACTTGATAGCCAGAAGAGACGAAGATATAAGAAATTGATCCATAGACACATGGATTTTGACACAATAAGATCGAGGATTTCCAACCACTCTGTGATGTCTGTTAAGGAACTCTTTCGAGATCTCTTGCTGCTTGCAAACAATGCCTTGGTGTTTTACTCCAAGAACACACGCGAATACGAATCTGCTTTGCTTCTCAGAGACCTCACCACCAAAACATTGCGGCAGCATCTCAAGGATTCTAGTGGCAAGGCTACCTCTGCCAACCTCTCCTCAAATGCATTAGTGTGTAATCCTCCCGGTAAACCCCGGAGTGCTCGCCCAGCTGGTAACAGAAGGTTGTCGGTAAAGGCTACCCATGCAGGAAATGCAGCTGCTAAGACTTCAAACAGAAGTAAGAAGCCAAGTCATGCTAATGCTGATTCCTCTCCTTCAGTTGAATCTTTTGCTGTGACGAAGAAAACCTCCGGGCACCCAAGAAAAGTTGGACGTAGAAGTGTTAGTCAACAAAATGTAACTCCCGTGAAGGGAAGGAAAAGAGGTCGGACAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

481

Amino Acids

53.52

Weight (kDa)

9.78

Isoelectric Point (pI)

58.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 18
Acc36I ACCTGC 1 cut(s) 18
AccB1I GGYRCC 1 cut(s) 1359
AccB7I CCANNNNNTGG 1 cut(s) 437
AccII CGCG 2 cut(s) 107, 1062
AciI CCGC 8 cut(s) 8, 105, 107, 126, 314, 733, 788, 1111
AclI AACGTT 1 cut(s) 840
AclWI GGATC 2 cut(s) 289, 922
AcoI YGGCCR 2 cut(s) 57, 102
AcsI RAATTY 2 cut(s) 745, 770
AcuI CTGAAG 2 cut(s) 528, 1305
AdeI CACNNNGTG 1 cut(s) 982
AfaI GTAC 2 cut(s) 137, 658
AfiI CCNNNNNNNGG 3 cut(s) 90, 437, 1415
AflIII ACRYGT 1 cut(s) 449
AgsI TTSAA 6 cut(s) 215, 302, 750, 847, 1275, 1328
AhlI ACTAGT 1 cut(s) 659
AjnI CCWGG 1 cut(s) 96
AjuI GAANNNNNNNTTGG 2 cut(s) 669, 701
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
AluBI AGCT 8 cut(s) 49, 112, 254, 298, 468, 533, 1214, 1262
AluI AGCT 8 cut(s) 49, 112, 254, 298, 468, 533, 1214, 1262
Alw21I GWGCWC 3 cut(s) 51, 114, 1207
Alw26I GTCTC 6 cut(s) 81, 241, 512, 622, 901, 1083
AlwI GGATC 2 cut(s) 289, 922
Ama87I CYCGRG 2 cut(s) 84, 149
AoxI GGCC 3 cut(s) 57, 63, 102
ApeKI GCWGC 5 cut(s) 468, 1018, 1114, 1259, 1262
ApoI RAATTY 2 cut(s) 745, 770
Asp700I GAANNNNTTC 2 cut(s) 842, 1002
AspS9I GGNCC 1 cut(s) 63
AsuC2I CCSGG 4 cut(s) 61, 1188, 1198, 1357
AsuHPI GGTGA 4 cut(s) 357, 465, 803, 1087
AvaI CYCGRG 2 cut(s) 84, 149
BaeGI GKGCMC 2 cut(s) 38, 1362
BanI GGYRCC 1 cut(s) 1359
BanII GRGCYC 2 cut(s) 51, 114
Bbv12I GWGCWC 3 cut(s) 51, 114, 1207
BbvI GCAGC 5 cut(s) 455, 1005, 1126, 1249, 1271
BccI CCATC 5 cut(s) 74, 229, 323, 439, 837
BcgI CGANNNNNNTGC 2 cut(s) 416, 450
BciT130I CCWGG 1 cut(s) 98
BcnI CCSGG 4 cut(s) 61, 1188, 1198, 1357
BcoDI GTCTC 6 cut(s) 81, 241, 512, 622, 901, 1083
BcuI ACTAGT 1 cut(s) 659
BfaI CTAG 3 cut(s) 608, 660, 1131
BfuAI ACCTGC 1 cut(s) 18
BglII AGATCT 2 cut(s) 217, 1009
BisI GCNGC 7 cut(s) 105, 469, 1019, 1112, 1115, 1260, 1263
BlsI GCNGC 7 cut(s) 106, 470, 1020, 1113, 1116, 1261, 1264
Bme1390I CCNGG 5 cut(s) 61, 98, 1188, 1198, 1357
BmeT110I CYCGRG 2 cut(s) 84, 149
BmgT120I GGNCC 1 cut(s) 63
BmiI GGNNCC 5 cut(s) 64, 82, 95, 349, 1361
BmrFI CCNGG 5 cut(s) 61, 98, 1188, 1198, 1357
BmsI GCATC 3 cut(s) 188, 706, 1126
BplI GAGNNNNNCTC 4 cut(s) 238, 270, 545, 577
BpmI CTGGAG 1 cut(s) 65
BpuEI CTTGAG 3 cut(s) 293, 547, 1106
BpuMI CCSGG 4 cut(s) 61, 1188, 1198, 1357
BsaI GGTCTC 1 cut(s) 1083
BsaJI CCNNGG 5 cut(s) 60, 105, 150, 1035, 1196
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 437, 1415
Bse1I ACTGG 2 cut(s) 95, 491
Bse3DI GCAATG 1 cut(s) 1106
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 5 cut(s) 60, 105, 150, 1035, 1196
BseGI GGATG 4 cut(s) 66, 203, 240, 673
BseLI CCNNNNNNNGG 3 cut(s) 90, 437, 1415
BseMI GCAATG 1 cut(s) 1106
BseMII CTCAG 3 cut(s) 258, 611, 1099
BseNI ACTGG 2 cut(s) 95, 491
BseRI GAGGAG 1 cut(s) 1150
BseSI GKGCMC 2 cut(s) 38, 1362
BseXI GCAGC 5 cut(s) 455, 1005, 1126, 1249, 1271
BseYI CCCAGC 1 cut(s) 1210
Bsh1236I CGCG 2 cut(s) 107, 1062
BshFI GGCC 3 cut(s) 59, 65, 104
BshNI GGYRCC 1 cut(s) 1359
BsiHKAI GWGCWC 3 cut(s) 51, 114, 1207
BsiHKCI CYCGRG 2 cut(s) 84, 149
BsiSI CCGG 4 cut(s) 60, 1188, 1198, 1356
BslFI GGGAC 1 cut(s) 405
BslI CCNNNNNNNGG 3 cut(s) 90, 437, 1415
BsmAI GTCTC 6 cut(s) 81, 241, 512, 622, 901, 1083
BsmBI CGTCTC 2 cut(s) 622, 901
BsmFI GGGAC 1 cut(s) 405
BsmI GAATGC 1 cut(s) 485
BsnI GGCC 3 cut(s) 59, 65, 104
Bso31I GGTCTC 1 cut(s) 1083
BsoBI CYCGRG 2 cut(s) 84, 149
Bsp1286I GDGCHC 5 cut(s) 38, 51, 114, 1207, 1362
Bsp143I GATC 5 cut(s) 217, 281, 927, 959, 1009
BspACI CCGC 8 cut(s) 8, 105, 107, 126, 314, 733, 788, 1111
BspANI GGCC 3 cut(s) 59, 65, 104
BspCNI CTCAG 3 cut(s) 259, 612, 1098
BspFNI CGCG 2 cut(s) 107, 1062
BspLI GGNNCC 5 cut(s) 64, 82, 95, 349, 1361
BspMI ACCTGC 1 cut(s) 18
BspPI GGATC 2 cut(s) 289, 922
BspT107I GGYRCC 1 cut(s) 1359
BspTNI GGTCTC 1 cut(s) 1083
BsrDI GCAATG 1 cut(s) 1106
BsrI ACTGG 2 cut(s) 95, 491
BssECI CCNNGG 5 cut(s) 60, 105, 150, 1035, 1196
BssMI GATC 5 cut(s) 217, 281, 927, 959, 1009
BssT1I CCWWGG 1 cut(s) 1035
Bst2UI CCWGG 1 cut(s) 98
Bst6I CTCTTC 5 cut(s) 234, 547, 638, 784, 899
BstAPI GCANNNNNTGC 2 cut(s) 1031, 1256
BstC8I GCNNGC 4 cut(s) 439, 682, 1023, 1207
BstDEI CTNAG 5 cut(s) 71, 267, 620, 1085, 1266
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 4 cut(s) 66, 203, 240, 673
BstFNI CGCG 2 cut(s) 107, 1062
BstKTI GATC 5 cut(s) 220, 284, 930, 962, 1012
BstMAI GTCTC 6 cut(s) 81, 241, 512, 622, 901, 1083
BstMBI GATC 5 cut(s) 217, 281, 927, 959, 1009
BstMWI GCNNNNNNNGC 9 cut(s) 33, 125, 413, 725, 1031, 1148, 1211, 1247, 1256
BstNI CCWGG 1 cut(s) 98
BstNSI RCATGY 1 cut(s) 453
BstSCI CCNGG 5 cut(s) 59, 96, 1186, 1196, 1355
BstSLI GKGCMC 2 cut(s) 38, 1362
BstUI CGCG 2 cut(s) 107, 1062
BstV1I GCAGC 5 cut(s) 455, 1005, 1126, 1249, 1271
BstX2I RGATCY 3 cut(s) 217, 281, 1009
BstYI RGATCY 3 cut(s) 217, 281, 1009
BsuRI GGCC 3 cut(s) 59, 65, 104
BtgI CCRYGG 1 cut(s) 105
BtsCI GGATG 4 cut(s) 66, 203, 240, 673
BtsIMutI CAGTG 1 cut(s) 393
BveI ACCTGC 1 cut(s) 18
Cac8I GCNNGC 4 cut(s) 439, 682, 1023, 1207
Cfr13I GGNCC 1 cut(s) 63
Cfr42I CCGCGG 1 cut(s) 108
CsiI ACCWGGT 1 cut(s) 96
Csp6I GTAC 2 cut(s) 136, 657
CviAII CATG 7 cut(s) 39, 450, 551, 568, 940, 1247, 1298
CviQI GTAC 2 cut(s) 136, 657
DdeI CTNAG 5 cut(s) 71, 267, 620, 1085, 1266
DpnI GATC 5 cut(s) 219, 283, 929, 961, 1011
DpnII GATC 5 cut(s) 217, 281, 927, 959, 1009
DraIII CACNNNGTG 1 cut(s) 982
EaeI YGGCCR 2 cut(s) 57, 102
Eam1104I CTCTTC 5 cut(s) 234, 547, 638, 784, 899
EarI CTCTTC 5 cut(s) 234, 547, 638, 784, 899
EciI GGCGGA 2 cut(s) 23, 329
Ecl136II GAGCTC 2 cut(s) 49, 112
Eco130I CCWWGG 1 cut(s) 1035
Eco24I GRGCYC 2 cut(s) 51, 114
Eco31I GGTCTC 1 cut(s) 1083
Eco53kI GAGCTC 2 cut(s) 49, 112
Eco57I CTGAAG 2 cut(s) 528, 1305
Eco88I CYCGRG 2 cut(s) 84, 149
EcoICRI GAGCTC 2 cut(s) 49, 112
EcoRII CCWGG 1 cut(s) 96
EcoT14I CCWWGG 1 cut(s) 1035
EcoT22I ATGCAT 1 cut(s) 1171
EcoT38I GRGCYC 2 cut(s) 51, 114
ErhI CCWWGG 1 cut(s) 1035
Esp3I CGTCTC 2 cut(s) 622, 901
FaeI CATG 7 cut(s) 42, 453, 554, 571, 943, 1250, 1301
FalI AAGNNNNNCTT 4 cut(s) 517, 549, 986, 1018
FaqI GGGAC 1 cut(s) 405
FatI CATG 7 cut(s) 38, 449, 550, 567, 939, 1246, 1297
FauI CCCGC 1 cut(s) 781
Fnu4HI GCNGC 7 cut(s) 105, 469, 1019, 1112, 1115, 1260, 1263
FokI GGATG 4 cut(s) 53, 210, 247, 680
FriOI GRGCYC 2 cut(s) 51, 114
Fsp4HI GCNGC 7 cut(s) 105, 469, 1019, 1112, 1115, 1260, 1263
FspBI CTAG 3 cut(s) 608, 660, 1131
GluI GCNGC 7 cut(s) 105, 469, 1019, 1112, 1115, 1260, 1263
GsaI CCCAGC 1 cut(s) 1214
GsuI CTGGAG 1 cut(s) 65
HaeIII GGCC 3 cut(s) 59, 65, 104
HapII CCGG 4 cut(s) 60, 1188, 1198, 1356
Hin1II CATG 7 cut(s) 42, 453, 554, 571, 943, 1250, 1301
HincII GTYRAC 3 cut(s) 462, 504, 1394
HindII GTYRAC 3 cut(s) 462, 504, 1394
HindIII AAGCTT 2 cut(s) 296, 531
HpaII CCGG 4 cut(s) 60, 1188, 1198, 1356
HphI GGTGA 4 cut(s) 357, 465, 803, 1087
Hpy166II GTNNAC 5 cut(s) 138, 462, 504, 1193, 1394
Hpy188I TCNGA 6 cut(s) 116, 268, 547, 621, 1088, 1434
Hpy188III TCNNGA 4 cut(s) 195, 713, 764, 1007
Hpy8I GTNNAC 5 cut(s) 138, 462, 504, 1193, 1394
HpyAV CCTTC 6 cut(s) 411, 643, 1218, 1329, 1408, 1413
HpyCH4IV ACGT 2 cut(s) 840, 1378
HpyCH4V TGCA 5 cut(s) 201, 1025, 1169, 1250, 1259
HpyF10VI GCNNNNNNNGC 9 cut(s) 33, 125, 413, 725, 1031, 1148, 1211, 1247, 1256
HpyF3I CTNAG 5 cut(s) 71, 267, 620, 1085, 1266
HpySE526I ACGT 2 cut(s) 840, 1378
Hsp92II CATG 7 cut(s) 42, 453, 554, 571, 943, 1250, 1301
KspI CCGCGG 1 cut(s) 108
Kzo9I GATC 5 cut(s) 217, 281, 927, 959, 1009
LmnI GCTCC 6 cut(s) 46, 54, 109, 117, 353, 859
Lsp1109I GCAGC 5 cut(s) 455, 1005, 1126, 1249, 1271
LweI GCATC 3 cut(s) 188, 706, 1126
MabI ACCWGGT 1 cut(s) 96
MaeI CTAG 3 cut(s) 608, 660, 1131
MaeII ACGT 2 cut(s) 840, 1378
MaeIII GTNAC 6 cut(s) 332, 493, 721, 1217, 1339, 1402
MalI GATC 5 cut(s) 219, 283, 929, 961, 1011
MboI GATC 5 cut(s) 217, 281, 927, 959, 1009
MflI RGATCY 3 cut(s) 217, 281, 1009
MhlI GDGCHC 5 cut(s) 38, 51, 114, 1207, 1362
MluCI AATT 5 cut(s) 340, 745, 770, 847, 923
MlyI GAGTC 2 cut(s) 266, 509
MmeI TCCRAC 3 cut(s) 996, 1354, 1412
Mph1103I ATGCAT 1 cut(s) 1171
MroXI GAANNNNTTC 2 cut(s) 842, 1002
MseI TTAA 3 cut(s) 420, 672, 993
MslI CAYNNNNRTG 4 cut(s) 478, 867, 1174, 1302
MspA1I CMGCKG 3 cut(s) 107, 1214, 1262
MspI CCGG 4 cut(s) 60, 1188, 1198, 1356
MspR9I CCNGG 5 cut(s) 61, 98, 1188, 1198, 1357
Mva1269I GAATGC 1 cut(s) 485
MvaI CCWGG 1 cut(s) 98
MvnI CGCG 2 cut(s) 107, 1062
MwoI GCNNNNNNNGC 9 cut(s) 33, 125, 413, 725, 1031, 1148, 1211, 1247, 1256
NciI CCSGG 4 cut(s) 61, 1188, 1198, 1357
NdeII GATC 5 cut(s) 217, 281, 927, 959, 1009
NlaIII CATG 7 cut(s) 42, 453, 554, 571, 943, 1250, 1301
NlaIV GGNNCC 5 cut(s) 64, 82, 95, 349, 1361
NmuCI GTSAC 1 cut(s) 1339
NsiI ATGCAT 1 cut(s) 1171
NspI RCATGY 1 cut(s) 453
PaqCI CACCTGC 1 cut(s) 18
PciI ACATGT 1 cut(s) 449
PctI GAATGC 1 cut(s) 485
PdmI GAANNNNTTC 2 cut(s) 842, 1002
PfeI GAWTC 8 cut(s) 290, 362, 616, 707, 1070, 1127, 1310, 1328
PflMI CCANNNNNTGG 1 cut(s) 437
PkrI GCNGC 7 cut(s) 106, 470, 1020, 1113, 1116, 1261, 1264
PleI GAGTC 2 cut(s) 266, 508
PpsI GAGTC 2 cut(s) 266, 508
PscI ACATGT 1 cut(s) 449
Psp124BI GAGCTC 2 cut(s) 51, 114
Psp1406I AACGTT 1 cut(s) 840
Psp6I CCWGG 1 cut(s) 96
PspFI CCCAGC 1 cut(s) 1210
PspGI CCWGG 1 cut(s) 96
PspN4I GGNNCC 5 cut(s) 64, 82, 95, 349, 1361
PspPI GGNCC 1 cut(s) 63
PsrI GAACNNNNNNTAC 2 cut(s) 790, 822
PsuI RGATCY 3 cut(s) 217, 281, 1009
PvuII CAGCTG 2 cut(s) 1214, 1262
RsaI GTAC 2 cut(s) 137, 658
RsaNI GTAC 2 cut(s) 136, 657
RseI CAYNNNNRTG 4 cut(s) 478, 867, 1174, 1302
SacI GAGCTC 2 cut(s) 51, 114
SacII CCGCGG 1 cut(s) 108
SaqAI TTAA 3 cut(s) 420, 672, 993
SatI GCNGC 7 cut(s) 105, 469, 1019, 1112, 1115, 1260, 1263
Sau3AI GATC 5 cut(s) 217, 281, 927, 959, 1009
Sau96I GGNCC 1 cut(s) 63
SchI GAGTC 2 cut(s) 266, 509
ScrFI CCNGG 5 cut(s) 61, 98, 1188, 1198, 1357
SduI GDGCHC 5 cut(s) 38, 51, 114, 1207, 1362
SexAI ACCWGGT 1 cut(s) 96
SfaNI GCATC 3 cut(s) 188, 706, 1126
Sfr303I CCGCGG 1 cut(s) 108
SgrBI CCGCGG 1 cut(s) 108
SmiMI CAYNNNNRTG 4 cut(s) 478, 867, 1174, 1302
SmlI CTYRAG 3 cut(s) 308, 562, 1121
SmoI CTYRAG 3 cut(s) 308, 562, 1121
SpeI ACTAGT 1 cut(s) 659
Sse9I AATT 5 cut(s) 340, 745, 770, 847, 923
SsiI CCGC 8 cut(s) 8, 105, 107, 126, 314, 733, 788, 1111
SspMI CTAG 3 cut(s) 608, 660, 1131
SstI GAGCTC 2 cut(s) 51, 114
StyD4I CCNGG 5 cut(s) 59, 96, 1186, 1196, 1355
StyI CCWWGG 1 cut(s) 1035
TaiI ACGT 2 cut(s) 843, 1381
TaqI TCGA 4 cut(s) 809, 889, 962, 1006
TasI AATT 5 cut(s) 340, 745, 770, 847, 923
TatI WGTACW 1 cut(s) 656
TauI GCSGC 2 cut(s) 107, 1114
TfiI GAWTC 8 cut(s) 290, 362, 616, 707, 1070, 1127, 1310, 1328
Tru1I TTAA 3 cut(s) 420, 672, 993
Tru9I TTAA 3 cut(s) 420, 672, 993
TscAI CASTG 1 cut(s) 393
TseFI GTSAC 1 cut(s) 1339
TseI GCWGC 5 cut(s) 468, 1018, 1114, 1259, 1262
Tsp45I GTSAC 1 cut(s) 1339
TspDTI ATGAA 2 cut(s) 834, 840
TspGWI ACGGA 3 cut(s) 93, 123, 247
TspRI CASTG 1 cut(s) 393
Van91I CCANNNNNTGG 1 cut(s) 437
XapI RAATTY 2 cut(s) 745, 770
XceI RCATGY 1 cut(s) 453
XmnI GAANNNNTTC 2 cut(s) 842, 1002
XspI CTAG 3 cut(s) 608, 660, 1131
Zsp2I ATGCAT 1 cut(s) 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.