Rorug04G0425300
MYB Family

bromo domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0011308
Physical Location & Seq
Forward (+)
58464373 .. 58469931
5559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0425300.1

Sequence Viewer

Length: 1935 bp
ATGGCCATCGACTCTCTCGTTCTGGGCGCCGGGCAAGAGGTAGGCAAGAGCTGTGTGATTGTGACGATCAACGGGAAACGAATCATGTTGGACTGTGGTATGCATATGGGCCACCTCGACCACCGCCGCTACCCTGACTTCTCCCTCATCGGCCCAAACTTCAATCAAACCCTCACTTGCATCATCATCACTCACTTTCATCTGGATCACATCGGCGCGCTCCCTTACTTCACTGAAGTCTGCGGTTACAGTGGCCCCATTTACATGACGTATCCGACAAAGGCGCTGGCGCCTTTGATGTTGGAGGACTATCGGAAAGTGATGGTTGAGAGAAGGGGCGAGGAGGAACAGTTTACGTCCGAGCATATTGTTGAATGCATGAAGAAAGTTATACCGGTGGATCTCAAGCAGACGGTGCAGGTTGATAAGGATCTTCAAATCCGTGCTTACTATGCAGGACATGTTCTTGGAGCTGCAATGTTTTATGCAAAGGTGGGAGACGCTGCTATGGTGTACACAGGAGACTATAATATGACACCAGACAGGCATCTTGGAGCAGCTCAAATTGATCGACTAAGTTTGGACCTTGTTATTACAGAGTCCACATATGCAACAACCATTCGTGATTCAAAATATGCCAGGGAAAGAGAATTTCTCAGAGCTGTTCACACCTGTGTTGCTGGTGGGGGAAAAGTGCTAATTCCTTCATTTGCTCTGGGAAGAGCTCAGGAACTCTGTATCTTATTGGAAGACTACTGGGAGCGCATGGATTTAAAGGTTCCTATTTACTTCTCAGCAGGTTTGACCCGTCAAGCCAATATGTATTATAAGATGCTCATCAGTTGGACCAGCCAGAAAATCAAAGAAACATACTCCACACATAATGCATTTGATTTTAAAAATGTTCACAAATTTGAGCGGTCTATGATAGATGCTCCTGGACCTTGTGTTCTGTTTGCCACACCGGGGATGATCAGTGGTGGTTTTTCACTTGAGGTTTTTAAGCACTGGGCTCCTTCAGAAAAGAATCTTGTTACAATGCCAGGGTATTGCGTGGCCGGAACCATAGGACATAAATTAATGTCTGGTAAACCGACCAAAATTGATCTGGACAAGGACACCCGAATTGATGTGCGATGCCAGATTCATCAATTGACTTTCAGTCCTCATACAGATGCCAAAGGGATTATGGATCTGGTGAAGTTTCTTTCTCCCAAGCACGTGATACTTGTTCATGGTGAGAAGCCTAGGATGGCTACTCTGAAAGGAAGAATTCAATCCGAACTGGGAATTCAATGCTACGACCCTGCAAACAATGAGACCGTGTCAGTTCCGTCCACCCACTATGCGACAGCAGTAGCTTCCGATGCATTTGTCCAAAGTTGCTCAAATCCAAACTTCAAGTTTTCTACAGGCGGCTCAGAACACGAACAAGGTTCAAGTTCGAGTAACAGAAAATCCATTCCGCGACTGCAAGTAAGTGATGATAGGGTAGCCGAAGGGATCTTGGTTATGGAGAAAAACAAAAAAGCCAAGGTAGTGCACCAAGATGAGCTCCTGGTCATGTTAGAAGAAAAGAAGCACCAAGTCAAGTTTGCATATTGCTGTCCTGCTCACATTGGTAACTTGCAAGAGAATCAAGAGACCGAAGGCACCGGCCTGCCTCTGTCCTCAACAAACAATGATCTGCTTCAGCTATTGTCTGCAAAACTCGCAAATGAACTCTCCGAGGGGAGCATTCAAGATTTCGGGGATCACCTTCAAGTGGAGTCGTTTCGCGTGTCCATTTGTTCAAAGGAGGATTGCCCTTACAGATTAAGTGACAACGGTGGTGAAGGACACTATGAGCCAGTGTTCTTTTGCTGCAGTTGGGCAATGGAAGATGAGAAGCTTGCATGGAAAGTCATCTCAGTGTGTCAAAAGTCAACACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Myb_DNA-binding

Protein Analysis

644

Amino Acids

71.99

Weight (kDa)

6.34

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lactamase_B PF00753 15 - 180 2.1e-09 Metallo-beta-lactamase superfamily
Anti-Pycsar_Apyc1 PF23023 17 - 182 3.6e-09 Anti-Pycsar protein Apyc1
Lactamase_B_6 PF16661 20 - 189 5.5e-21 Metallo-beta-lactamase superfamily domain
Beta-Casp PF10996 242 - 360 3.7e-28 Beta-Casp domain
RMMBL PF07521 375 - 434 9.8e-16 Zn-dependent metallo-hydrolase RNA specificity domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
Acc36I ACCTGC 2 cut(s) 409, 788
AccB1I GGYRCC 3 cut(s) 26, 289, 1652
AccBSI CCGCTC 1 cut(s) 919
AccII CGCG 3 cut(s) 218, 1468, 1779
AciI CCGC 6 cut(s) 124, 127, 243, 919, 1416, 1466
AclWI GGATC 6 cut(s) 213, 408, 438, 1200, 1511, 1761
AcoI YGGCCR 2 cut(s) 3, 1056
AcsI RAATTY 4 cut(s) 650, 911, 1272, 1290
AcuI CTGAAG 3 cut(s) 255, 1002, 1676
AcvI CACGTG 1 cut(s) 1222
AcyI GRCGYC 2 cut(s) 27, 290
AfaI GTAC 1 cut(s) 515
AfiI CCNNNNNNNGG 2 cut(s) 966, 1765
AflIII ACRYGT 1 cut(s) 460
AgeI ACCGGT 1 cut(s) 394
AhdI GACNNNNNGTC 1 cut(s) 1161
AjnI CCWGG 4 cut(s) 638, 937, 1042, 1557
AleI CACNNNNGTG 1 cut(s) 672
AloI GAACNNNNNNTCC 2 cut(s) 933, 965
AluBI AGCT 9 cut(s) 51, 473, 560, 662, 725, 1361, 1555, 1696, 1891
AluI AGCT 9 cut(s) 51, 473, 560, 662, 725, 1361, 1555, 1696, 1891
Alw21I GWGCWC 3 cut(s) 727, 1545, 1557
Alw26I GTCTC 4 cut(s) 492, 516, 1313, 1637
Alw44I GTGCAC 1 cut(s) 1541
AlwI GGATC 6 cut(s) 213, 408, 438, 1200, 1511, 1761
AoxI GGCC 6 cut(s) 3, 109, 151, 253, 1056, 1657
ApaLI GTGCAC 1 cut(s) 1541
ApeKI GCWGC 4 cut(s) 473, 503, 557, 1863
ApoI RAATTY 4 cut(s) 650, 911, 1272, 1290
AseI ATTAAT 1 cut(s) 1079
AsiGI ACCGGT 1 cut(s) 394
AspA2I CCTAGG 1 cut(s) 1247
AspLEI GCGC 6 cut(s) 29, 218, 220, 286, 292, 765
AspS9I GGNCC 6 cut(s) 109, 152, 254, 583, 846, 941
AsuC2I CCSGG 2 cut(s) 31, 966
AsuHPI GGTGA 4 cut(s) 1210, 1250, 1748, 1844
AvaII GGWCC 3 cut(s) 583, 846, 941
AvrII CCTAGG 1 cut(s) 1247
BaeGI GKGCMC 1 cut(s) 1545
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 3 cut(s) 26, 289, 1652
BanII GRGCYC 3 cut(s) 727, 1015, 1557
BbrPI CACGTG 1 cut(s) 1222
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 3 cut(s) 727, 1545, 1557
BbvI GCAGC 4 cut(s) 460, 490, 569, 1850
BccI CCATC 3 cut(s) 14, 316, 1246
BciT130I CCWGG 4 cut(s) 640, 939, 1044, 1559
BciVI GTATCC 1 cut(s) 282
BclI TGATCA 1 cut(s) 972
BcnI CCSGG 2 cut(s) 31, 966
BcoDI GTCTC 4 cut(s) 492, 516, 1313, 1637
BfaI CTAG 1 cut(s) 1248
BfmI CTRYAG 2 cut(s) 1410, 1864
BfoI RGCGCY 3 cut(s) 30, 287, 293
BfuAI ACCTGC 2 cut(s) 409, 788
BfuI GTATCC 1 cut(s) 282
BisI GCNGC 6 cut(s) 127, 474, 504, 558, 1417, 1864
BlnI CCTAGG 1 cut(s) 1247
BlsI GCNGC 6 cut(s) 128, 475, 505, 559, 1418, 1865
Bme1390I CCNGG 6 cut(s) 31, 640, 939, 966, 1044, 1559
Bme18I GGWCC 3 cut(s) 583, 846, 941
BmeRI GACNNNNNGTC 1 cut(s) 1161
BmgT120I GGNCC 6 cut(s) 109, 152, 254, 583, 846, 941
BmiI GGNNCC 7 cut(s) 28, 256, 291, 780, 1014, 1063, 1654
BmrFI CCNGG 6 cut(s) 31, 640, 939, 966, 1044, 1559
BmrI ACTGGG 3 cut(s) 766, 1018, 1295
BmsI GCATC 7 cut(s) 189, 556, 822, 922, 1127, 1165, 1357
BmuI ACTGGG 3 cut(s) 766, 1018, 1295
BpiI GAAGAC 1 cut(s) 756
BplI GAGNNNNNCTC 2 cut(s) 639, 671
Bpu10I CCTNAGC 1 cut(s) 726
BpuEI CTTGAG 2 cut(s) 389, 1013
BpuMI CCSGG 2 cut(s) 31, 966
BsaAI YACGTR 1 cut(s) 1222
BsaBI GATNNNNATC 2 cut(s) 429, 836
BsaHI GRCGYC 2 cut(s) 27, 290
BsaI GGTCTC 2 cut(s) 1313, 1637
BsaJI CCNNGG 6 cut(s) 639, 965, 1043, 1247, 1533, 1728
BsaWI WCCGGW 1 cut(s) 394
BsaXI ACNNNNNCTCC 2 cut(s) 335, 365
Bsc4I CCNNNNNNNGG 2 cut(s) 966, 1765
Bse118I RCCGGY 2 cut(s) 394, 1655
Bse1I ACTGG 4 cut(s) 761, 1013, 1290, 1850
Bse3DI GCAATG 2 cut(s) 483, 1881
Bse8I GATNNNNATC 2 cut(s) 429, 836
BseBI CCWGG 4 cut(s) 640, 939, 1044, 1559
BseDI CCNNGG 6 cut(s) 639, 965, 1043, 1247, 1533, 1728
BseGI GGATG 2 cut(s) 975, 1257
BseJI GATNNNNATC 2 cut(s) 429, 836
BseLI CCNNNNNNNGG 2 cut(s) 966, 1765
BseMI GCAATG 2 cut(s) 483, 1881
BseMII CTCAG 5 cut(s) 670, 740, 807, 1434, 1923
BseNI ACTGG 4 cut(s) 761, 1013, 1290, 1850
BsePI GCGCGC 1 cut(s) 216
BseRI GAGGAG 1 cut(s) 356
BseSI GKGCMC 1 cut(s) 1545
BseXI GCAGC 4 cut(s) 460, 490, 569, 1850
BsgI GTGCAG 1 cut(s) 437
Bsh1236I CGCG 3 cut(s) 218, 1468, 1779
BshFI GGCC 6 cut(s) 5, 111, 153, 255, 1058, 1659
BshNI GGYRCC 3 cut(s) 26, 289, 1652
BshTI ACCGGT 1 cut(s) 394
BsiHKAI GWGCWC 3 cut(s) 727, 1545, 1557
BsiSI CCGG 5 cut(s) 30, 395, 965, 1059, 1656
BslI CCNNNNNNNGG 2 cut(s) 966, 1765
BsmAI GTCTC 4 cut(s) 492, 516, 1313, 1637
BsmBI CGTCTC 1 cut(s) 492
BsmI GAATGC 2 cut(s) 380, 1737
BsnI GGCC 6 cut(s) 5, 111, 153, 255, 1058, 1659
Bso31I GGTCTC 2 cut(s) 1313, 1637
Bsp1286I GDGCHC 4 cut(s) 727, 1015, 1545, 1557
Bsp1407I TGTACA 1 cut(s) 513
BspACI CCGC 6 cut(s) 124, 127, 243, 919, 1416, 1466
BspANI GGCC 6 cut(s) 5, 111, 153, 255, 1058, 1659
BspCNI CTCAG 5 cut(s) 669, 739, 806, 1433, 1922
BspFNI CGCG 3 cut(s) 218, 1468, 1779
BspLI GGNNCC 7 cut(s) 28, 256, 291, 780, 1014, 1063, 1654
BspMAI CTGCAG 1 cut(s) 1868
BspMI ACCTGC 2 cut(s) 409, 788
BspPI GGATC 6 cut(s) 213, 408, 438, 1200, 1511, 1761
BspQI GCTCTTC 1 cut(s) 715
BspT107I GGYRCC 3 cut(s) 26, 289, 1652
BspTNI GGTCTC 2 cut(s) 1313, 1637
BsrBI CCGCTC 1 cut(s) 919
BsrDI GCAATG 2 cut(s) 483, 1881
BsrFI RCCGGY 2 cut(s) 394, 1655
BsrGI TGTACA 1 cut(s) 513
BsrI ACTGG 4 cut(s) 761, 1013, 1290, 1850
BssAI RCCGGY 2 cut(s) 394, 1655
BssECI CCNNGG 6 cut(s) 639, 965, 1043, 1247, 1533, 1728
BssHII GCGCGC 1 cut(s) 216
BssNI GRCGYC 2 cut(s) 27, 290
BssT1I CCWWGG 2 cut(s) 1247, 1533
Bst2UI CCWGG 4 cut(s) 640, 939, 1044, 1559
Bst4CI ACNGT 6 cut(s) 95, 251, 351, 415, 1324, 1829
Bst6I CTCTTC 1 cut(s) 715
BstACI GRCGYC 2 cut(s) 27, 290
BstAPI GCANNNNNTGC 1 cut(s) 415
BstAUI TGTACA 1 cut(s) 513
BstBAI YACGTR 1 cut(s) 1222
BstC8I GCNNGC 4 cut(s) 218, 288, 1661, 1893
BstDEI CTNAG 6 cut(s) 575, 656, 726, 793, 1420, 1909
BstF5I GGATG 2 cut(s) 975, 1257
BstFNI CGCG 3 cut(s) 218, 1468, 1779
BstH2I RGCGCY 3 cut(s) 30, 287, 293
BstHHI GCGC 6 cut(s) 29, 218, 220, 286, 292, 765
BstMAI GTCTC 4 cut(s) 492, 516, 1313, 1637
BstMWI GCNNNNNNNGC 4 cut(s) 415, 452, 1367, 1712
BstNI CCWGG 4 cut(s) 640, 939, 1044, 1559
BstNSI RCATGY 1 cut(s) 464
BstSCI CCNGG 6 cut(s) 29, 638, 937, 964, 1042, 1557
BstSFI CTRYAG 2 cut(s) 1410, 1864
BstSLI GKGCMC 1 cut(s) 1545
BstUI CGCG 3 cut(s) 218, 1468, 1779
BstV1I GCAGC 4 cut(s) 460, 490, 569, 1850
BstV2I GAAGAC 1 cut(s) 756
BstX2I RGATCY 4 cut(s) 400, 430, 1192, 1503
BstYI RGATCY 4 cut(s) 400, 430, 1192, 1503
BsuI GTATCC 1 cut(s) 282
BsuRI GGCC 6 cut(s) 5, 111, 153, 255, 1058, 1659
BtgZI GCGATG 1 cut(s) 1150
BtsCI GGATG 2 cut(s) 975, 1257
BtsIMutI CAGTG 6 cut(s) 231, 256, 982, 1006, 1857, 1917
BveI ACCTGC 2 cut(s) 409, 788
Cac8I GCNNGC 4 cut(s) 218, 288, 1661, 1893
CfoI GCGC 6 cut(s) 29, 218, 220, 286, 292, 765
Cfr10I RCCGGY 2 cut(s) 394, 1655
Cfr13I GGNCC 6 cut(s) 109, 152, 254, 583, 846, 941
CseI GACGC 1 cut(s) 509
Csp6I GTAC 1 cut(s) 514
CspAI ACCGGT 1 cut(s) 394
CviAII CATG 8 cut(s) 85, 265, 379, 461, 766, 1235, 1564, 1896
CviQI GTAC 1 cut(s) 514
DdeI CTNAG 6 cut(s) 575, 656, 726, 793, 1420, 1909
DinI GGCGCC 2 cut(s) 28, 291
DraI TTTAAA 2 cut(s) 774, 898
DriI GACNNNNNGTC 1 cut(s) 1161
EaeI YGGCCR 2 cut(s) 3, 1056
Eam1104I CTCTTC 1 cut(s) 715
Eam1105I GACNNNNNGTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 715
Ecl136II GAGCTC 2 cut(s) 725, 1555
Eco130I CCWWGG 2 cut(s) 1247, 1533
Eco24I GRGCYC 3 cut(s) 727, 1015, 1557
Eco31I GGTCTC 2 cut(s) 1313, 1637
Eco47I GGWCC 3 cut(s) 583, 846, 941
Eco53kI GAGCTC 2 cut(s) 725, 1555
Eco57I CTGAAG 3 cut(s) 255, 1002, 1676
Eco72I CACGTG 1 cut(s) 1222
EcoICRI GAGCTC 2 cut(s) 725, 1555
EcoRI GAATTC 2 cut(s) 1272, 1290
EcoRII CCWGG 4 cut(s) 638, 937, 1042, 1557
EcoT14I CCWWGG 2 cut(s) 1247, 1533
EcoT22I ATGCAT 4 cut(s) 105, 380, 889, 1372
EcoT38I GRGCYC 3 cut(s) 727, 1015, 1557
EgeI GGCGCC 2 cut(s) 28, 291
EheI GGCGCC 2 cut(s) 28, 291
ErhI CCWWGG 2 cut(s) 1247, 1533
Esp3I CGTCTC 1 cut(s) 492
FaeI CATG 8 cut(s) 88, 268, 382, 464, 769, 1238, 1567, 1899
FatI CATG 8 cut(s) 84, 264, 378, 460, 765, 1234, 1563, 1895
FauNDI CATATG 2 cut(s) 105, 607
FbaI TGATCA 1 cut(s) 972
Fnu4HI GCNGC 6 cut(s) 127, 474, 504, 558, 1417, 1864
FokI GGATG 2 cut(s) 982, 1264
FriOI GRGCYC 3 cut(s) 727, 1015, 1557
Fsp4HI GCNGC 6 cut(s) 127, 474, 504, 558, 1417, 1864
FspBI CTAG 1 cut(s) 1248
GlaI GCGC 6 cut(s) 28, 217, 219, 285, 291, 764
GluI GCNGC 6 cut(s) 127, 474, 504, 558, 1417, 1864
HaeII RGCGCY 3 cut(s) 30, 287, 293
HaeIII GGCC 6 cut(s) 5, 111, 153, 255, 1058, 1659
HapII CCGG 5 cut(s) 30, 395, 965, 1059, 1656
HgaI GACGC 1 cut(s) 509
HhaI GCGC 6 cut(s) 29, 218, 220, 286, 292, 765
Hin1I GRCGYC 2 cut(s) 27, 290
Hin1II CATG 8 cut(s) 88, 268, 382, 464, 769, 1238, 1567, 1899
Hin6I GCGC 6 cut(s) 27, 216, 218, 284, 290, 763
HinP1I GCGC 6 cut(s) 27, 216, 218, 284, 290, 763
HincII GTYRAC 1 cut(s) 1926
HindII GTYRAC 1 cut(s) 1926
HindIII AAGCTT 1 cut(s) 1889
HinfI GANTC 8 cut(s) 11, 81, 599, 626, 1027, 1144, 1636, 1769
HpaII CCGG 5 cut(s) 30, 395, 965, 1059, 1656
HphI GGTGA 4 cut(s) 1210, 1250, 1748, 1844
Hpy188III TCNNGA 6 cut(s) 203, 623, 728, 1109, 1640, 1742
HpyAV CCTTC 7 cut(s) 327, 714, 1026, 1493, 1643, 1769, 1829
HpyCH4III ACNGT 6 cut(s) 95, 251, 351, 415, 1324, 1829
HpyCH4IV ACGT 3 cut(s) 269, 356, 1221
HpyF10VI GCNNNNNNNGC 4 cut(s) 415, 452, 1367, 1712
HpyF3I CTNAG 6 cut(s) 575, 656, 726, 793, 1420, 1909
HpySE526I ACGT 3 cut(s) 269, 356, 1221
Hsp92I GRCGYC 2 cut(s) 27, 290
Hsp92II CATG 8 cut(s) 88, 268, 382, 464, 769, 1238, 1567, 1899
HspAI GCGC 6 cut(s) 27, 216, 218, 284, 290, 763
KasI GGCGCC 2 cut(s) 26, 289
Ksp22I TGATCA 1 cut(s) 972
LguI GCTCTTC 1 cut(s) 715
LmnI GCTCC 8 cut(s) 225, 470, 554, 760, 940, 1018, 1560, 1734
Lsp1109I GCAGC 4 cut(s) 460, 490, 569, 1850
LweI GCATC 7 cut(s) 189, 556, 822, 922, 1127, 1165, 1357
MaeI CTAG 1 cut(s) 1248
MaeII ACGT 3 cut(s) 269, 356, 1221
MaeIII GTNAC 6 cut(s) 61, 245, 1033, 1448, 1622, 1820
MbiI CCGCTC 1 cut(s) 919
MboII GAAGA 7 cut(s) 394, 425, 732, 761, 1281, 1583, 1892
MfeI CAATTG 1 cut(s) 1151
MflI RGATCY 4 cut(s) 400, 430, 1192, 1503
MhlI GDGCHC 4 cut(s) 727, 1015, 1545, 1557
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 2 cut(s) 27, 290
MlyI GAGTC 3 cut(s) 5, 608, 1778
MmeI TCCRAC 4 cut(s) 69, 282, 299, 824
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 4 cut(s) 105, 380, 889, 1372
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 773, 897, 1002, 1079, 1817
MslI CAYNNNNRTG 5 cut(s) 263, 672, 1173, 1548, 1910
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 5 cut(s) 30, 395, 965, 1059, 1656
MspR9I CCNGG 6 cut(s) 31, 640, 939, 966, 1044, 1559
MunI CAATTG 1 cut(s) 1151
Mva1269I GAATGC 2 cut(s) 380, 1737
MvaI CCWGG 4 cut(s) 640, 939, 1044, 1559
MvnI CGCG 3 cut(s) 218, 1468, 1779
MwoI GCNNNNNNNGC 4 cut(s) 415, 452, 1367, 1712
NarI GGCGCC 2 cut(s) 27, 290
NciI CCSGG 2 cut(s) 31, 966
NdeI CATATG 2 cut(s) 105, 607
NlaIII CATG 8 cut(s) 88, 268, 382, 464, 769, 1238, 1567, 1899
NlaIV GGNNCC 7 cut(s) 28, 256, 291, 780, 1014, 1063, 1654
NmuCI GTSAC 2 cut(s) 61, 1820
NsiI ATGCAT 4 cut(s) 105, 380, 889, 1372
NspI RCATGY 1 cut(s) 464
OliI CACNNNNGTG 1 cut(s) 672
PauI GCGCGC 1 cut(s) 216
PciI ACATGT 1 cut(s) 460
PciSI GCTCTTC 1 cut(s) 715
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 2 cut(s) 380, 1737
PfeI GAWTC 5 cut(s) 81, 626, 1027, 1144, 1636
PflFI GACNNNGTC 1 cut(s) 1324
PfoI TCCNGGA 1 cut(s) 937
PinAI ACCGGT 1 cut(s) 394
PkrI GCNGC 6 cut(s) 128, 475, 505, 559, 1418, 1865
PleI GAGTC 3 cut(s) 5, 607, 1777
PluTI GGCGCC 2 cut(s) 30, 293
PmaCI CACGTG 1 cut(s) 1222
PmlI CACGTG 1 cut(s) 1222
PpsI GAGTC 3 cut(s) 5, 607, 1777
Ppu21I YACGTR 1 cut(s) 1222
PscI ACATGT 1 cut(s) 460
PshBI ATTAAT 1 cut(s) 1079
PsiI TTATAA 1 cut(s) 828
Psp124BI GAGCTC 2 cut(s) 727, 1557
Psp6I CCWGG 4 cut(s) 638, 937, 1042, 1557
PspCI CACGTG 1 cut(s) 1222
PspGI CCWGG 4 cut(s) 638, 937, 1042, 1557
PspN4I GGNNCC 7 cut(s) 28, 256, 291, 780, 1014, 1063, 1654
PspPI GGNCC 6 cut(s) 109, 152, 254, 583, 846, 941
PstI CTGCAG 1 cut(s) 1868
PsuI RGATCY 4 cut(s) 400, 430, 1192, 1503
PsyI GACNNNGTC 1 cut(s) 1324
PteI GCGCGC 1 cut(s) 216
RsaI GTAC 1 cut(s) 515
RsaNI GTAC 1 cut(s) 514
RseI CAYNNNNRTG 5 cut(s) 263, 672, 1173, 1548, 1910
SacI GAGCTC 2 cut(s) 727, 1557
SapI GCTCTTC 1 cut(s) 715
SaqAI TTAA 5 cut(s) 773, 897, 1002, 1079, 1817
SatI GCNGC 6 cut(s) 127, 474, 504, 558, 1417, 1864
Sau96I GGNCC 6 cut(s) 109, 152, 254, 583, 846, 941
SchI GAGTC 3 cut(s) 5, 608, 1778
ScrFI CCNGG 6 cut(s) 31, 640, 939, 966, 1044, 1559
SduI GDGCHC 4 cut(s) 727, 1015, 1545, 1557
SfaNI GCATC 7 cut(s) 189, 556, 822, 922, 1127, 1165, 1357
SfcI CTRYAG 2 cut(s) 1410, 1864
SfoI GGCGCC 2 cut(s) 28, 291
SinI GGWCC 3 cut(s) 583, 846, 941
SmiMI CAYNNNNRTG 5 cut(s) 263, 672, 1173, 1548, 1910
SmlI CTYRAG 2 cut(s) 404, 992
SmoI CTYRAG 2 cut(s) 404, 992
SsiI CCGC 6 cut(s) 124, 127, 243, 919, 1416, 1466
SspDI GGCGCC 2 cut(s) 26, 289
SspMI CTAG 1 cut(s) 1248
SstI GAGCTC 2 cut(s) 727, 1557
StyD4I CCNGG 6 cut(s) 29, 638, 937, 964, 1042, 1557
StyI CCWWGG 2 cut(s) 1247, 1533
TaaI ACNGT 6 cut(s) 95, 251, 351, 415, 1324, 1829
TaiI ACGT 3 cut(s) 272, 359, 1224
TaqI TCGA 4 cut(s) 9, 117, 571, 1445
TaqII GACCGA 1 cut(s) 1661
TatI WGTACW 1 cut(s) 513
TauI GCSGC 2 cut(s) 129, 1419
TfiI GAWTC 5 cut(s) 81, 626, 1027, 1144, 1636
Tru1I TTAA 5 cut(s) 773, 897, 1002, 1079, 1817
Tru9I TTAA 5 cut(s) 773, 897, 1002, 1079, 1817
TscAI CASTG 6 cut(s) 238, 256, 982, 1013, 1857, 1917
TseFI GTSAC 2 cut(s) 61, 1820
TseI GCWGC 4 cut(s) 473, 503, 557, 1863
Tsp45I GTSAC 2 cut(s) 61, 1820
TspDTI ATGAA 6 cut(s) 188, 395, 696, 1136, 1223, 1734
TspGWI ACGGA 2 cut(s) 431, 1323
TspRI CASTG 6 cut(s) 238, 256, 982, 1013, 1857, 1917
Tth111I GACNNNGTC 1 cut(s) 1324
VneI GTGCAC 1 cut(s) 1541
VpaK11BI GGWCC 3 cut(s) 583, 846, 941
VspI ATTAAT 1 cut(s) 1079
XapI RAATTY 4 cut(s) 650, 911, 1272, 1290
XceI RCATGY 1 cut(s) 464
XcmI CCANNNNNNNNNTGG 2 cut(s) 1105, 1186
XmaJI CCTAGG 1 cut(s) 1247
XspI CTAG 1 cut(s) 1248
Zsp2I ATGCAT 4 cut(s) 105, 380, 889, 1372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.