Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0011308

Physical Location & Seq

Genomic Coordinates Forward (+)

58455961 .. 58461615

Gene Structure 5655 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0425200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGAGGAAGTTTCCGGCGACGGAGCCGCGTCGTCTCCGATGATGGAGTTCAGCGGCGGCAATGGACTGCCGCCGGGGTACAATCCGACGCCTCCGCCGCTCACGGTGTCGGGATCGTTCAAGGAGGGGAGGAGCTCGTCGCGGAGGAGAGCAATCAGGAGGCCGAGCATGGACGGCGACGAGTTCATTAACCTCCTGCACGGCTCGGATCCGGTCAAGGTGGAGCTCAATCGCCTCGAGAATGAAGTCAGAGATAAGGACCGAGAGTTGGGAGAGGCGCAGGCTCAGATCAAGGCTCTCAAGCTCTCTGAGAGAGCCAGGGAAAAGGCTGTTGAAGAGCTCACTGATGAACTGACGAAGGTGGACGAGAAGCTCAAGTTAACGGAATCTCTTCTAGAAAACAAAAATCTTGAAATAAAGAAGATCAATGATGAGAAGAAAGCTTCTATGGCAGCTCAATTCGCAGCTGAAGCTACTCTACGTAGGGTTCATGCTGCTCAAAAAGATGATGATATGCCTCCAATTGAAGCCATTCTTGCACCTTTGGAGGCTGAGCTCAAGCTTGCTCGGCAAGAGATTGCAAAGCTTCAAGATGATAACAAAGCTTTGGATCGGCTTACCAAATCAAAAGAAGCAGCTTTACTTGAGGCTGAGAGGACTGTGGAGGTTGCCTTGGTTAAGGCCTCCATGGTGGATGACCTTCAAAATAAAAACCAAGAGTTGATGAAACAGATCGAAATTTGTCAGGAAGAAAACAAAATTTTAGATAGAATGCATAGACAAAAGGTTGCCGAGGTTGAAAAGCTTACGCAGACTGTGCGGGAGTTGGAAGAGGCAGTTCTTGCTGGTGGTGCTGCAGCCAATGCTGTCAGGGATTACCAGCGGAAGTTCCAGGAGATGAATGAGGAAAGGAAAACTCTAGACCGGGAGTTGGCCCGTGCAAAAGTCACAGCAAACAGAGTAGCCGTAGTGGTAGCAAATGAGTGGAAAGACGCTAACGACAAAGTGATGCCTGTAAAGCAATGGCTTGAAGAACGGAGATTCTTGCAGGGAGAAATGCAGCAACTTCGGGACAAGCTTGCCATAACTGAAAGAGCTGCCAAGTCAGAAGCTCAGTTGAAAGAAAAATATCATATGCGACTTAAAGTGCTTGAGGAGAGTGTGAGAGGATCTTCGAACAGTATTAGTCGAAGCACAGCAGAAGGAAGAAGTATAAGCAATGGACCCTCTCGACGTCAGTCTCTTGGTGGAGCGGATAACGTTCCAAAATTATCCTCCAATGGCTTTTTATCCAAGAGAACACCAGTCAGATCCTTGTCCTCCAGCACCAGTTCAGTCTTGAAGCATGCGAAAGGCACTTCAAAATCATTTGATGGCGGTACTAGATCATTGGACAGGGGGAAGGTTCTGTTAAATGGTGCAAGCTCCAATTTCTCAGTCAACCAATCTTGTGAGGGAACCAAGGATGGGGAAGTACAAAATAACTGGAAAGGCAATTCTGATGATAAGCCAAATGAGTTCTCAACAGTGGATACAGAGGATAATGTCCCGGGGGTTTTGTATGATTTGCTACAGAAAGAGGTTGTAGCTTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTGAAAGACAAAGATGACGCTATTGAGATGTTAGCCAAGAAGGTAGACACCTTGACTAAAGCAATGGAGGTTGAGGCAAAGAAAATGAGAAGAGAAGTTGCCGCTATGGAGAAGGAGGTAGCTGCCATGCGTGTGGACAAAGAACACGACAATAGGGCCAAGCGGTTTGGTAGTGCCAAAACCTCTGTCAACAGTGCTCAAGTGCTTTCTGGAAGAGGTCTGTCACGAGGAGGGTTGACACGCAGCACCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

625

Amino Acids

69.4

Weight (kDa)

8.6

Isoelectric Point (pI)

42.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP70	PF07058	60 - 609	6.5e-298	Microtubule-associated protein 70

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61215 AT1G61215
fragaria_vesca	FvH4_3g04470 FvH4_3g04470
malus_domestica	MD05G1322900.v1.1
prunus_persica	Prupe.4G039700_v2.0.a1 Prupe.4G039700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0006871
rosa_laevigata	RLG00000031436
rosa_multiflora	Rmu_co8483441.1_g000001 Rmu_sc0001044.1_g000031 Rmu_sc0012775.1_g000003
rosa_roxburghii	Rroxscaffold_1G00069180
rosa_rugosa	Rorug04G0425200 Rorug04G0425300
rosa_samantha	Rh5AG052900 Rh5BG051900 Rh5CG060400 Rh5DG051000
rosa_wichuraiana	Rw5G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1237
AccBSI	CCGCTC	2 cut(s)	100, 1253
AccI	GTMKAC	1 cut(s)	1668
AccII	CGCG	2 cut(s)	29, 142
AclI	AACGTT	1 cut(s)	1260
AclWI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
AcsI	RAATTY	2 cut(s)	738, 759
AcuI	CTGAAG	1 cut(s)	489
AcyI	GRCGYC	2 cut(s)	89, 1234
AfaI	GTAC	3 cut(s)	80, 1381, 1476
AfiI	CCNNNNNNNGG	3 cut(s)	268, 931, 1467
AjnI	CCWGG	2 cut(s)	317, 891
Alw21I	GWGCWC	5 cut(s)	137, 228, 342, 558, 1822
Alw26I	GTCTC	2 cut(s)	39, 1245
AlwI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
Ama87I	CYCGRG	2 cut(s)	236, 1549
AoxI	GGCC	4 cut(s)	161, 681, 933, 1779
ApoI	RAATTY	2 cut(s)	738, 759
ArsI	GACNNNNNNTTYG	2 cut(s)	1794, 1826
Asp700I	GAANNNNTTC	2 cut(s)	390, 531
AspLEI	GCGC	1 cut(s)	280
AspS9I	GGNCC	4 cut(s)	259, 934, 1223, 1779
AsuC2I	CCSGG	4 cut(s)	75, 926, 1550, 1551
AsuII	TTCGAA	1 cut(s)	1175
AvaI	CYCGRG	2 cut(s)	236, 1549
AvaII	GGWCC	2 cut(s)	259, 1223
BamHI	GGATCC	1 cut(s)	208
BanII	GRGCYC	4 cut(s)	137, 228, 342, 558
BarI	GAAGNNNNNNTAC	4 cut(s)	462, 494, 624, 656
BauI	CACGAG	1 cut(s)	1848
Bbv12I	GWGCWC	5 cut(s)	137, 228, 342, 558, 1822
BbvI	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1732
BccI	CCATC	3 cut(s)	37, 1367, 1460
BceAI	ACGGC	3 cut(s)	190, 217, 950
BcgI	CGANNNNNNTGC	2 cut(s)	1049, 1083
BciT130I	CCWGG	2 cut(s)	319, 893
BciVI	GTATCC	1 cut(s)	1525
BcnI	CCSGG	4 cut(s)	75, 926, 1550, 1551
BcoDI	GTCTC	2 cut(s)	39, 1245
BfaI	CTAG	3 cut(s)	395, 920, 1383
BfmI	CTRYAG	2 cut(s)	855, 1571
BfuI	GTATCC	1 cut(s)	1525
BlpI	GCTNAGC	1 cut(s)	552
Bme1390I	CCNGG	6 cut(s)	75, 319, 893, 926, 1550, 1551
Bme18I	GGWCC	2 cut(s)	259, 1223
BmeT110I	CYCGRG	2 cut(s)	236, 1549
BmgT120I	GGNCC	4 cut(s)	259, 934, 1223, 1779
BmiI	GGNNCC	4 cut(s)	25, 210, 1225, 1459
BmrFI	CCNGG	6 cut(s)	75, 319, 893, 926, 1550, 1551
BmsI	GCATC	1 cut(s)	999
BoxI	GACNNNNGTC	1 cut(s)	1237
BpmI	CTGGAG	1 cut(s)	1306
Bpu1102I	GCTNAGC	1 cut(s)	552
Bpu14I	TTCGAA	1 cut(s)	1175
BpuEI	CTTGAG	6 cut(s)	284, 359, 542, 665, 1172, 1806
BpuMI	CCSGG	4 cut(s)	75, 926, 1550, 1551
BsaAI	YACGTR	1 cut(s)	482
BsaHI	GRCGYC	2 cut(s)	89, 1234
BsaJI	CCNNGG	8 cut(s)	74, 318, 672, 687, 792, 1461, 1549, 1550
BsaWI	WCCGGW	1 cut(s)	211
Bsc4I	CCNNNNNNNGG	3 cut(s)	268, 931, 1467
Bse1I	ACTGG	3 cut(s)	1304, 1329, 1490
Bse3DI	GCAATG	4 cut(s)	67, 1028, 1225, 1692
BseBI	CCWGG	2 cut(s)	319, 893
BseDI	CCNNGG	8 cut(s)	74, 318, 672, 687, 792, 1461, 1549, 1550
BseGI	GGATG	2 cut(s)	700, 1471
BseLI	CCNNNNNNNGG	3 cut(s)	268, 931, 1467
BseMI	GCAATG	4 cut(s)	67, 1028, 1225, 1692
BseMII	CTCAG	6 cut(s)	299, 300, 543, 642, 1127, 1449
BseNI	ACTGG	3 cut(s)	1304, 1329, 1490
BseRI	GAGGAG	4 cut(s)	145, 160, 1169, 1866
BseXI	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1732
BsgI	GTGCAG	1 cut(s)	182
Bsh1236I	CGCG	2 cut(s)	29, 142
BshFI	GGCC	4 cut(s)	163, 683, 935, 1781
BsiHKAI	GWGCWC	5 cut(s)	137, 228, 342, 558, 1822
BsiHKCI	CYCGRG	2 cut(s)	236, 1549
BsiSI	CCGG	5 cut(s)	15, 74, 212, 925, 1550
BslFI	GGGAC	2 cut(s)	1085, 1532
BslI	CCNNNNNNNGG	3 cut(s)	268, 931, 1467
BsmAI	GTCTC	2 cut(s)	39, 1245
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	2 cut(s)	1085, 1532
BsmI	GAATGC	1 cut(s)	777
BsnI	GGCC	4 cut(s)	163, 683, 935, 1781
BsoBI	CYCGRG	2 cut(s)	236, 1549
Bsp119I	TTCGAA	1 cut(s)	1175
Bsp1286I	GDGCHC	5 cut(s)	137, 228, 342, 558, 1822
Bsp1720I	GCTNAGC	1 cut(s)	552
Bsp19I	CCATGG	1 cut(s)	687
BspANI	GGCC	4 cut(s)	163, 683, 935, 1781
BspCNI	CTCAG	6 cut(s)	298, 301, 544, 643, 1126, 1448
BspFNI	CGCG	2 cut(s)	29, 142
BspHI	TCATGA	1 cut(s)	1606
BspLI	GGNNCC	4 cut(s)	25, 210, 1225, 1459
BspMAI	CTGCAG	1 cut(s)	859
BspPI	GGATC	6 cut(s)	121, 203, 216, 618, 1177, 1305
BspQI	GCTCTTC	1 cut(s)	330
BspT104I	TTCGAA	1 cut(s)	1175
BsrBI	CCGCTC	2 cut(s)	100, 1253
BsrDI	GCAATG	4 cut(s)	67, 1028, 1225, 1692
BsrI	ACTGG	3 cut(s)	1304, 1329, 1490
BssECI	CCNNGG	8 cut(s)	74, 318, 672, 687, 792, 1461, 1549, 1550
BssNI	GRCGYC	2 cut(s)	89, 1234
BssSI	CACGAG	1 cut(s)	1848
BssT1I	CCWWGG	3 cut(s)	672, 687, 1461
Bst2BI	CACGAG	1 cut(s)	1848
Bst2UI	CCWGG	2 cut(s)	319, 893
Bst4CI	ACNGT	6 cut(s)	106, 661, 817, 1181, 1528, 1817
Bst6I	CTCTTC	5 cut(s)	330, 396, 825, 1708, 1831
BstACI	GRCGYC	2 cut(s)	89, 1234
BstAPI	GCANNNNNTGC	3 cut(s)	817, 842, 863
BstBAI	YACGTR	1 cut(s)	482
BstBI	TTCGAA	1 cut(s)	1175
BstC8I	GCNNGC	5 cut(s)	282, 564, 1080, 1347, 1423
BstDEI	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1435
BstDSI	CCRYGG	1 cut(s)	687
BstF5I	GGATG	2 cut(s)	700, 1471
BstFNI	CGCG	2 cut(s)	29, 142
BstHHI	GCGC	1 cut(s)	280
BstMAI	GTCTC	2 cut(s)	39, 1245
BstNI	CCWGG	2 cut(s)	319, 893
BstNSI	RCATGY	1 cut(s)	1349
BstPAI	GACNNNNGTC	1 cut(s)	1237
BstSCI	CCNGG	6 cut(s)	73, 317, 891, 924, 1548, 1549
BstSFI	CTRYAG	2 cut(s)	855, 1571
BstSNI	TACGTA	1 cut(s)	482
BstUI	CGCG	2 cut(s)	29, 142
BstV1I	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1732
BstX2I	RGATCY	3 cut(s)	208, 1169, 1310
BstXI	CCANNNNNNTGG	1 cut(s)	1756
BstYI	RGATCY	3 cut(s)	208, 1169, 1310
BsuI	GTATCC	1 cut(s)	1525
BsuRI	GGCC	4 cut(s)	163, 683, 935, 1781
BtgI	CCRYGG	1 cut(s)	687
BtsCI	GGATG	2 cut(s)	700, 1471
BtsIMutI	CAGTG	3 cut(s)	342, 1533, 1822
Cac8I	GCNNGC	5 cut(s)	282, 564, 1080, 1347, 1423
CciI	TCATGA	1 cut(s)	1606
CfoI	GCGC	1 cut(s)	280
Cfr13I	GGNCC	4 cut(s)	259, 934, 1223, 1779
Cfr9I	CCCGGG	1 cut(s)	1549
CseI	GACGC	4 cut(s)	18, 97, 1001, 1649
Csp6I	GTAC	3 cut(s)	79, 1380, 1475
CviAII	CATG	6 cut(s)	169, 491, 688, 1346, 1607, 1750
CviQI	GTAC	3 cut(s)	79, 1380, 1475
DdeI	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1435
Eam1104I	CTCTTC	5 cut(s)	330, 396, 825, 1708, 1831
EarI	CTCTTC	5 cut(s)	330, 396, 825, 1708, 1831
EciI	GGCGGA	1 cut(s)	84
Ecl136II	GAGCTC	4 cut(s)	135, 226, 340, 556
Eco105I	TACGTA	1 cut(s)	482
Eco130I	CCWWGG	3 cut(s)	672, 687, 1461
Eco147I	AGGCCT	1 cut(s)	683
Eco24I	GRGCYC	4 cut(s)	137, 228, 342, 558
Eco47I	GGWCC	2 cut(s)	259, 1223
Eco53kI	GAGCTC	4 cut(s)	135, 226, 340, 556
Eco57I	CTGAAG	1 cut(s)	489
Eco88I	CYCGRG	2 cut(s)	236, 1549
EcoICRI	GAGCTC	4 cut(s)	135, 226, 340, 556
EcoRII	CCWGG	2 cut(s)	317, 891
EcoT14I	CCWWGG	3 cut(s)	672, 687, 1461
EcoT22I	ATGCAT	1 cut(s)	777
EcoT38I	GRGCYC	4 cut(s)	137, 228, 342, 558
ErhI	CCWWGG	3 cut(s)	672, 687, 1461
Esp3I	CGTCTC	1 cut(s)	39
FaeI	CATG	6 cut(s)	172, 494, 691, 1349, 1610, 1753
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	2 cut(s)	1085, 1532
FatI	CATG	6 cut(s)	168, 490, 687, 1345, 1606, 1749
FauI	CCCGC	1 cut(s)	813
FauNDI	CATATG	1 cut(s)	1134
FblI	GTMKAC	1 cut(s)	1668
FokI	GGATG	2 cut(s)	707, 1478
FriOI	GRGCYC	4 cut(s)	137, 228, 342, 558
FspBI	CTAG	3 cut(s)	395, 920, 1383
GlaI	GCGC	1 cut(s)	279
GsuI	CTGGAG	1 cut(s)	1306
HaeIII	GGCC	4 cut(s)	163, 683, 935, 1781
HapII	CCGG	5 cut(s)	15, 74, 212, 925, 1550
HgaI	GACGC	4 cut(s)	18, 97, 1001, 1649
HhaI	GCGC	1 cut(s)	280
Hin1I	GRCGYC	2 cut(s)	89, 1234
Hin1II	CATG	6 cut(s)	172, 494, 691, 1349, 1610, 1753
Hin6I	GCGC	1 cut(s)	278
HinP1I	GCGC	1 cut(s)	278
HincII	GTYRAC	4 cut(s)	381, 1441, 1813, 1860
HindII	GTYRAC	4 cut(s)	381, 1441, 1813, 1860
HindIII	AAGCTT	6 cut(s)	441, 560, 584, 603, 803, 1076
HinfI	GANTC	2 cut(s)	386, 1041
HpaI	GTTAAC	1 cut(s)	381
HpaII	CCGG	5 cut(s)	15, 74, 212, 925, 1550
Hpy166II	GTNNAC	7 cut(s)	364, 381, 1441, 1669, 1759, 1813, 1860
Hpy188I	TCNGA	9 cut(s)	39, 87, 208, 251, 288, 310, 1108, 1310, 1501
Hpy8I	GTNNAC	7 cut(s)	364, 381, 1441, 1669, 1759, 1813, 1860
Hpy99I	CGWCG	6 cut(s)	23, 34, 91, 142, 182, 1236
HpyAV	CCTTC	6 cut(s)	352, 710, 1196, 1396, 1657, 1729
HpyCH4III	ACNGT	6 cut(s)	106, 661, 817, 1181, 1528, 1817
HpyCH4IV	ACGT	3 cut(s)	481, 1234, 1260
HpyCH4V	TGCA	9 cut(s)	199, 539, 581, 775, 857, 941, 1048, 1060, 1421
HpyF3I	CTNAG	6 cut(s)	285, 309, 552, 651, 1113, 1435
HpySE526I	ACGT	3 cut(s)	481, 1234, 1260
Hsp92I	GRCGYC	2 cut(s)	89, 1234
Hsp92II	CATG	6 cut(s)	172, 494, 691, 1349, 1610, 1753
HspAI	GCGC	1 cut(s)	278
KspAI	GTTAAC	1 cut(s)	381
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	5 cut(s)	23, 132, 223, 1250, 1430
Lsp1109I	GCAGC	9 cut(s)	464, 476, 481, 647, 841, 869, 1072, 1084, 1732
LweI	GCATC	1 cut(s)	999
MaeI	CTAG	3 cut(s)	395, 920, 1383
MaeII	ACGT	3 cut(s)	481, 1234, 1260
MaeIII	GTNAC	2 cut(s)	946, 1845
MbiI	CCGCTC	2 cut(s)	100, 1253
MfeI	CAATTG	1 cut(s)	522
MflI	RGATCY	3 cut(s)	208, 1169, 1310
MhlI	GDGCHC	5 cut(s)	137, 228, 342, 558, 1822
MluCI	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1429, 1495
MmeI	TCCRAC	2 cut(s)	110, 807
Mph1103I	ATGCAT	1 cut(s)	777
MroXI	GAANNNNTTC	2 cut(s)	390, 531
MseI	TTAA	5 cut(s)	189, 380, 678, 1143, 1412
MslI	CAYNNNNRTG	1 cut(s)	1754
MspA1I	CMGCKG	3 cut(s)	54, 467, 883
MspI	CCGG	5 cut(s)	15, 74, 212, 925, 1550
MspR9I	CCNGG	6 cut(s)	75, 319, 893, 926, 1550, 1551
MunI	CAATTG	1 cut(s)	522
Mva1269I	GAATGC	1 cut(s)	777
MvaI	CCWGG	2 cut(s)	319, 893
MvnI	CGCG	2 cut(s)	29, 142
NciI	CCSGG	4 cut(s)	75, 926, 1550, 1551
NcoI	CCATGG	1 cut(s)	687
NdeI	CATATG	1 cut(s)	1134
NlaIII	CATG	6 cut(s)	172, 494, 691, 1349, 1610, 1753
NlaIV	GGNNCC	4 cut(s)	25, 210, 1225, 1459
NmeAIII	GCCGAG	3 cut(s)	189, 547, 817
NmuCI	GTSAC	2 cut(s)	946, 1845
NsiI	ATGCAT	1 cut(s)	777
NspI	RCATGY	1 cut(s)	1349
NspV	TTCGAA	1 cut(s)	1175
PaeI	GCATGC	1 cut(s)	1349
PaeR7I	CTCGAG	1 cut(s)	236
PagI	TCATGA	1 cut(s)	1606
PceI	AGGCCT	1 cut(s)	683
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	1 cut(s)	777
PdmI	GAANNNNTTC	2 cut(s)	390, 531
PfeI	GAWTC	2 cut(s)	386, 1041
PfoI	TCCNGGA	1 cut(s)	891
Ppu21I	YACGTR	1 cut(s)	482
PshAI	GACNNNNGTC	1 cut(s)	1237
Psp124BI	GAGCTC	4 cut(s)	137, 228, 342, 558
Psp1406I	AACGTT	1 cut(s)	1260
Psp6I	CCWGG	2 cut(s)	317, 891
PspGI	CCWGG	2 cut(s)	317, 891
PspN4I	GGNNCC	4 cut(s)	25, 210, 1225, 1459
PspPI	GGNCC	4 cut(s)	259, 934, 1223, 1779
PstI	CTGCAG	1 cut(s)	859
PsuI	RGATCY	3 cut(s)	208, 1169, 1310
PvuII	CAGCTG	1 cut(s)	467
RsaI	GTAC	3 cut(s)	80, 1381, 1476
RsaNI	GTAC	3 cut(s)	79, 1380, 1475
RseI	CAYNNNNRTG	1 cut(s)	1754
SacI	GAGCTC	4 cut(s)	137, 228, 342, 558
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	5 cut(s)	189, 380, 678, 1143, 1412
Sau96I	GGNCC	4 cut(s)	259, 934, 1223, 1779
ScrFI	CCNGG	6 cut(s)	75, 319, 893, 926, 1550, 1551
SduI	GDGCHC	5 cut(s)	137, 228, 342, 558, 1822
SfaNI	GCATC	1 cut(s)	999
SfcI	CTRYAG	2 cut(s)	855, 1571
Sfr274I	CTCGAG	1 cut(s)	236
SfuI	TTCGAA	1 cut(s)	1175
SinI	GGWCC	2 cut(s)	259, 1223
SlaI	CTCGAG	1 cut(s)	236
SmaI	CCCGGG	1 cut(s)	1551
SmiMI	CAYNNNNRTG	1 cut(s)	1754
SmlI	CTYRAG	7 cut(s)	236, 299, 374, 557, 644, 1151, 1821
SmoI	CTYRAG	7 cut(s)	236, 299, 374, 557, 644, 1151, 1821
SnaBI	TACGTA	1 cut(s)	482
SphI	GCATGC	1 cut(s)	1349
Sse9I	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1429, 1495
SseBI	AGGCCT	1 cut(s)	683
SspMI	CTAG	3 cut(s)	395, 920, 1383
SstI	GAGCTC	4 cut(s)	137, 228, 342, 558
StuI	AGGCCT	1 cut(s)	683
StyD4I	CCNGG	6 cut(s)	73, 317, 891, 924, 1548, 1549
StyI	CCWWGG	3 cut(s)	672, 687, 1461
TaaI	ACNGT	6 cut(s)	106, 661, 817, 1181, 1528, 1817
TaiI	ACGT	3 cut(s)	484, 1237, 1263
TaqI	TCGA	5 cut(s)	237, 735, 1175, 1189, 1231
TaqII	GACCGA	1 cut(s)	276
TasI	AATT	7 cut(s)	458, 522, 738, 759, 1268, 1429, 1495
TatI	WGTACW	1 cut(s)	1474
TauI	GCSGC	6 cut(s)	29, 57, 60, 73, 100, 1727
TfiI	GAWTC	2 cut(s)	386, 1041
Tru1I	TTAA	5 cut(s)	189, 380, 678, 1143, 1412
Tru9I	TTAA	5 cut(s)	189, 380, 678, 1143, 1412
TscAI	CASTG	3 cut(s)	349, 1533, 1822
TseFI	GTSAC	2 cut(s)	946, 1845
Tsp45I	GTSAC	2 cut(s)	946, 1845
TspDTI	ATGAA	6 cut(s)	175, 258, 363, 479, 740, 914
TspGWI	ACGGA	3 cut(s)	36, 398, 1051
TspMI	CCCGGG	1 cut(s)	1549
TspRI	CASTG	3 cut(s)	349, 1533, 1822
VpaK11BI	GGWCC	2 cut(s)	259, 1223
XapI	RAATTY	2 cut(s)	738, 759
XbaI	TCTAGA	2 cut(s)	394, 919
XceI	RCATGY	1 cut(s)	1349
XhoI	CTCGAG	1 cut(s)	236
XmaI	CCCGGG	1 cut(s)	1549
XmiI	GTMKAC	1 cut(s)	1668
XmnI	GAANNNNTTC	2 cut(s)	390, 531
XspI	CTAG	3 cut(s)	395, 920, 1383
ZraI	GACGTC	1 cut(s)	1235
Zsp2I	ATGCAT	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.