Pyruvate dehydrogenase E1 component subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30120 AT2G34590 |
| fragaria_vesca | FvH4_3g05390 |
| malus_domestica | MD05G1282600.v1.1 |
| prunus_persica | Prupe.4G082200_v2.0.a1 |
| pyrus_communis | pycom05g26190 |
| rosa_chinensis | RchiOBHm_Chr5g0014341 |
| rosa_laevigata | RLG00000032100 |
| rosa_multiflora | Rmu_ssc0000422.1_g000047 |
| rosa_roxburghii | Rroxscaffold_1G00062240 |
| rosa_rugosa | Rorug05G0017400 |
| rosa_samantha | Rh5AG111700 Rh5BG108900 Rh5CG120700 Rh5DG107800 |
| rosa_wichuraiana | Rw5G009730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1189 |
| AccII | CGCG | 1 cut(s) | 1011 |
| AciI | CCGC | 4 cut(s) | 224, 1009, 1036, 1149 |
| AclWI | GGATC | 5 cut(s) | 84, 302, 315, 361, 926 |
| AcsI | RAATTY | 4 cut(s) | 157, 576, 792, 988 |
| AdeI | CACNNNGTG | 1 cut(s) | 1012 |
| AfaI | GTAC | 2 cut(s) | 359, 872 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 99 |
| AgsI | TTSAA | 4 cut(s) | 162, 269, 961, 1178 |
| AjnI | CCWGG | 6 cut(s) | 97, 244, 375, 598, 667, 844 |
| Alw21I | GWGCWC | 2 cut(s) | 169, 633 |
| Alw26I | GTCTC | 3 cut(s) | 16, 55, 466 |
| AlwI | GGATC | 5 cut(s) | 84, 302, 315, 361, 926 |
| AoxI | GGCC | 3 cut(s) | 174, 373, 842 |
| ApeKI | GCWGC | 7 cut(s) | 38, 221, 455, 725, 902, 1067, 1207 |
| ApoI | RAATTY | 4 cut(s) | 157, 576, 792, 988 |
| AspLEI | GCGC | 1 cut(s) | 221 |
| AspS9I | GGNCC | 3 cut(s) | 152, 174, 596 |
| AsuC2I | CCSGG | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 3 cut(s) | 341, 376, 928 |
| AsuII | TTCGAA | 1 cut(s) | 733 |
| AsuNHI | GCTAGC | 1 cut(s) | 1055 |
| AvaII | GGWCC | 2 cut(s) | 152, 596 |
| BaeGI | GKGCMC | 1 cut(s) | 252 |
| BamHI | GGATCC | 1 cut(s) | 307 |
| BanII | GRGCYC | 1 cut(s) | 169 |
| BbsI | GAAGAC | 1 cut(s) | 1113 |
| Bbv12I | GWGCWC | 2 cut(s) | 169, 633 |
| BbvI | GCAGC | 6 cut(s) | 25, 208, 442, 712, 889, 1079 |
| BccI | CCATC | 3 cut(s) | 209, 292, 829 |
| BceAI | ACGGC | 2 cut(s) | 249, 1212 |
| BciT130I | CCWGG | 6 cut(s) | 99, 246, 377, 600, 669, 846 |
| BcnI | CCSGG | 1 cut(s) | 139 |
| BcoDI | GTCTC | 3 cut(s) | 16, 55, 466 |
| BfaI | CTAG | 5 cut(s) | 303, 512, 644, 1056, 1097 |
| BfmI | CTRYAG | 2 cut(s) | 6, 1065 |
| BfoI | RGCGCY | 1 cut(s) | 222 |
| BfuAI | ACCTGC | 1 cut(s) | 1189 |
| BglII | AGATCT | 3 cut(s) | 128, 394, 525 |
| BisI | GCNGC | 9 cut(s) | 39, 222, 225, 456, 726, 903, 1068, 1149, 1208 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 9 cut(s) | 40, 223, 226, 457, 727, 904, 1069, 1150, 1209 |
| Bme1390I | CCNGG | 7 cut(s) | 99, 139, 246, 377, 600, 669, 846 |
| Bme18I | GGWCC | 2 cut(s) | 152, 596 |
| BmgT120I | GGNCC | 3 cut(s) | 152, 174, 596 |
| BmiI | GGNNCC | 2 cut(s) | 153, 309 |
| BmrFI | CCNGG | 7 cut(s) | 99, 139, 246, 377, 600, 669, 846 |
| BmrI | ACTGGG | 1 cut(s) | 740 |
| BmsI | GCATC | 4 cut(s) | 124, 245, 885, 1090 |
| BmtI | GCTAGC | 1 cut(s) | 1059 |
| BmuI | ACTGGG | 1 cut(s) | 740 |
| BpiI | GAAGAC | 1 cut(s) | 1113 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| Bpu14I | TTCGAA | 1 cut(s) | 733 |
| BpuEI | CTTGAG | 3 cut(s) | 46, 767, 842 |
| BpuMI | CCSGG | 1 cut(s) | 139 |
| BsaAI | YACGTR | 1 cut(s) | 278 |
| BsaI | GGTCTC | 2 cut(s) | 55, 466 |
| BsaJI | CCNNGG | 5 cut(s) | 97, 98, 138, 245, 845 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 512, 542 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 99 |
| Bse1I | ACTGG | 4 cut(s) | 469, 581, 746, 1216 |
| BseBI | CCWGG | 6 cut(s) | 99, 246, 377, 600, 669, 846 |
| BseDI | CCNNGG | 5 cut(s) | 97, 98, 138, 245, 845 |
| BseGI | GGATG | 2 cut(s) | 885, 1135 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 99 |
| BseMII | CTCAG | 7 cut(s) | 29, 412, 414, 461, 618, 822, 1068 |
| BseNI | ACTGG | 4 cut(s) | 469, 581, 746, 1216 |
| BseRI | GAGGAG | 3 cut(s) | 43, 65, 1040 |
| BseSI | GKGCMC | 1 cut(s) | 252 |
| BseXI | GCAGC | 6 cut(s) | 25, 208, 442, 712, 889, 1079 |
| Bsh1236I | CGCG | 1 cut(s) | 1011 |
| BshFI | GGCC | 3 cut(s) | 176, 375, 844 |
| BsiHKAI | GWGCWC | 2 cut(s) | 169, 633 |
| BsiSI | CCGG | 1 cut(s) | 138 |
| BslFI | GGGAC | 1 cut(s) | 354 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 99 |
| BsmAI | GTCTC | 3 cut(s) | 16, 55, 466 |
| BsmFI | GGGAC | 1 cut(s) | 354 |
| BsnI | GGCC | 3 cut(s) | 176, 375, 844 |
| Bso31I | GGTCTC | 2 cut(s) | 55, 466 |
| Bsp119I | TTCGAA | 1 cut(s) | 733 |
| Bsp1286I | GDGCHC | 3 cut(s) | 169, 252, 633 |
| Bsp143I | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| BspACI | CCGC | 4 cut(s) | 224, 1009, 1036, 1149 |
| BspANI | GGCC | 3 cut(s) | 176, 375, 844 |
| BspCNI | CTCAG | 7 cut(s) | 28, 411, 415, 462, 619, 823, 1069 |
| BspFNI | CGCG | 1 cut(s) | 1011 |
| BspLI | GGNNCC | 2 cut(s) | 153, 309 |
| BspMAI | CTGCAG | 1 cut(s) | 1069 |
| BspMI | ACCTGC | 1 cut(s) | 1189 |
| BspOI | GCTAGC | 1 cut(s) | 1059 |
| BspPI | GGATC | 5 cut(s) | 84, 302, 315, 361, 926 |
| BspT104I | TTCGAA | 1 cut(s) | 733 |
| BspTNI | GGTCTC | 2 cut(s) | 55, 466 |
| BsrI | ACTGG | 4 cut(s) | 469, 581, 746, 1216 |
| BssECI | CCNNGG | 5 cut(s) | 97, 98, 138, 245, 845 |
| BssMI | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| Bst2UI | CCWGG | 6 cut(s) | 99, 246, 377, 600, 669, 846 |
| Bst4CI | ACNGT | 4 cut(s) | 10, 316, 539, 1171 |
| Bst6I | CTCTTC | 1 cut(s) | 288 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 769 |
| BstBAI | YACGTR | 1 cut(s) | 278 |
| BstBI | TTCGAA | 1 cut(s) | 733 |
| BstC8I | GCNNGC | 5 cut(s) | 688, 900, 1013, 1034, 1057 |
| BstDEI | CTNAG | 8 cut(s) | 15, 144, 398, 423, 470, 627, 831, 1077 |
| BstEII | GGTNACC | 1 cut(s) | 364 |
| BstF5I | GGATG | 2 cut(s) | 885, 1135 |
| BstFNI | CGCG | 1 cut(s) | 1011 |
| BstH2I | RGCGCY | 1 cut(s) | 222 |
| BstHHI | GCGC | 1 cut(s) | 221 |
| BstKTI | GATC | 9 cut(s) | 92, 131, 181, 310, 356, 397, 528, 934, 973 |
| BstMAI | GTCTC | 3 cut(s) | 16, 55, 466 |
| BstMBI | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 35, 173, 209, 218, 233, 769, 850 |
| BstNI | CCWGG | 6 cut(s) | 99, 246, 377, 600, 669, 846 |
| BstNSI | RCATGY | 4 cut(s) | 690, 767, 857, 1036 |
| BstPI | GGTNACC | 1 cut(s) | 364 |
| BstSCI | CCNGG | 7 cut(s) | 97, 137, 244, 375, 598, 667, 844 |
| BstSFI | CTRYAG | 2 cut(s) | 6, 1065 |
| BstSLI | GKGCMC | 1 cut(s) | 252 |
| BstUI | CGCG | 1 cut(s) | 1011 |
| BstV1I | GCAGC | 6 cut(s) | 25, 208, 442, 712, 889, 1079 |
| BstV2I | GAAGAC | 1 cut(s) | 1113 |
| BstX2I | RGATCY | 5 cut(s) | 89, 128, 307, 394, 525 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 376, 913 |
| BstYI | RGATCY | 5 cut(s) | 89, 128, 307, 394, 525 |
| BsuRI | GGCC | 3 cut(s) | 176, 375, 844 |
| BtsCI | GGATG | 2 cut(s) | 885, 1135 |
| BtsIMutI | CAGTG | 5 cut(s) | 23, 312, 753, 999, 1074 |
| BveI | ACCTGC | 1 cut(s) | 1189 |
| Cac8I | GCNNGC | 5 cut(s) | 688, 900, 1013, 1034, 1057 |
| CfoI | GCGC | 1 cut(s) | 221 |
| Cfr13I | GGNCC | 3 cut(s) | 152, 174, 596 |
| Csp6I | GTAC | 2 cut(s) | 358, 871 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 520, 555 |
| CviAII | CATG | 8 cut(s) | 460, 496, 687, 764, 854, 890, 1033, 1088 |
| CviQI | GTAC | 2 cut(s) | 358, 871 |
| DdeI | CTNAG | 8 cut(s) | 15, 144, 398, 423, 470, 627, 831, 1077 |
| DpnI | GATC | 9 cut(s) | 91, 130, 180, 309, 355, 396, 527, 933, 972 |
| DpnII | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| DraI | TTTAAA | 1 cut(s) | 574 |
| DraIII | CACNNNGTG | 1 cut(s) | 1012 |
| Eam1104I | CTCTTC | 1 cut(s) | 288 |
| EarI | CTCTTC | 1 cut(s) | 288 |
| Ecl136II | GAGCTC | 1 cut(s) | 167 |
| Eco147I | AGGCCT | 2 cut(s) | 375, 844 |
| Eco24I | GRGCYC | 1 cut(s) | 169 |
| Eco31I | GGTCTC | 2 cut(s) | 55, 466 |
| Eco47I | GGWCC | 2 cut(s) | 152, 596 |
| Eco53kI | GAGCTC | 1 cut(s) | 167 |
| Eco91I | GGTNACC | 1 cut(s) | 364 |
| EcoICRI | GAGCTC | 1 cut(s) | 167 |
| EcoO65I | GGTNACC | 1 cut(s) | 364 |
| EcoRI | GAATTC | 2 cut(s) | 157, 792 |
| EcoRII | CCWGG | 6 cut(s) | 97, 244, 375, 598, 667, 844 |
| EcoT38I | GRGCYC | 1 cut(s) | 169 |
| FaeI | CATG | 8 cut(s) | 463, 499, 690, 767, 857, 893, 1036, 1091 |
| FaqI | GGGAC | 1 cut(s) | 354 |
| FatI | CATG | 8 cut(s) | 459, 495, 686, 763, 853, 889, 1032, 1087 |
| FauNDI | CATATG | 1 cut(s) | 1144 |
| Fnu4HI | GCNGC | 9 cut(s) | 39, 222, 225, 456, 726, 903, 1068, 1149, 1208 |
| FokI | GGATG | 2 cut(s) | 892, 1142 |
| FriOI | GRGCYC | 1 cut(s) | 169 |
| Fsp4HI | GCNGC | 9 cut(s) | 39, 222, 225, 456, 726, 903, 1068, 1149, 1208 |
| FspBI | CTAG | 5 cut(s) | 303, 512, 644, 1056, 1097 |
| GlaI | GCGC | 1 cut(s) | 220 |
| GluI | GCNGC | 9 cut(s) | 39, 222, 225, 456, 726, 903, 1068, 1149, 1208 |
| HaeII | RGCGCY | 1 cut(s) | 222 |
| HaeIII | GGCC | 3 cut(s) | 176, 375, 844 |
| HapII | CCGG | 1 cut(s) | 138 |
| HhaI | GCGC | 1 cut(s) | 221 |
| Hin1II | CATG | 8 cut(s) | 463, 499, 690, 767, 857, 893, 1036, 1091 |
| Hin6I | GCGC | 1 cut(s) | 219 |
| HinP1I | GCGC | 1 cut(s) | 219 |
| HindIII | AAGCTT | 1 cut(s) | 68 |
| HinfI | GANTC | 4 cut(s) | 647, 664, 672, 751 |
| HpaII | CCGG | 1 cut(s) | 138 |
| HphI | GGTGA | 3 cut(s) | 341, 376, 928 |
| Hpy188I | TCNGA | 5 cut(s) | 128, 133, 156, 471, 879 |
| Hpy188III | TCNNGA | 7 cut(s) | 162, 407, 644, 797, 821, 935, 1097 |
| Hpy99I | CGWCG | 2 cut(s) | 174, 235 |
| HpyAV | CCTTC | 4 cut(s) | 90, 275, 518, 606 |
| HpyCH4III | ACNGT | 4 cut(s) | 10, 316, 539, 1171 |
| HpyCH4IV | ACGT | 3 cut(s) | 277, 640, 869 |
| HpyCH4V | TGCA | 4 cut(s) | 203, 898, 1032, 1067 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 35, 173, 209, 218, 233, 769, 850 |
| HpyF3I | CTNAG | 8 cut(s) | 15, 144, 398, 423, 470, 627, 831, 1077 |
| HpySE526I | ACGT | 3 cut(s) | 277, 640, 869 |
| Hsp92II | CATG | 8 cut(s) | 463, 499, 690, 767, 857, 893, 1036, 1091 |
| HspAI | GCGC | 1 cut(s) | 219 |
| Kzo9I | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| LmnI | GCTCC | 4 cut(s) | 26, 452, 552, 850 |
| Lsp1109I | GCAGC | 6 cut(s) | 25, 208, 442, 712, 889, 1079 |
| LweI | GCATC | 4 cut(s) | 124, 245, 885, 1090 |
| MaeI | CTAG | 5 cut(s) | 303, 512, 644, 1056, 1097 |
| MaeII | ACGT | 3 cut(s) | 277, 640, 869 |
| MaeIII | GTNAC | 4 cut(s) | 364, 856, 1165, 1192 |
| MalI | GATC | 9 cut(s) | 91, 130, 180, 309, 355, 396, 527, 933, 972 |
| MboI | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| MboII | GAAGA | 7 cut(s) | 302, 305, 344, 815, 965, 1009, 1113 |
| MflI | RGATCY | 5 cut(s) | 89, 128, 307, 394, 525 |
| MhlI | GDGCHC | 3 cut(s) | 169, 252, 633 |
| MluCI | AATT | 7 cut(s) | 157, 186, 477, 576, 792, 988, 1047 |
| MlyI | GAGTC | 1 cut(s) | 656 |
| MmeI | TCCRAC | 2 cut(s) | 81, 555 |
| MseI | TTAA | 2 cut(s) | 519, 573 |
| MspI | CCGG | 1 cut(s) | 138 |
| MspR9I | CCNGG | 7 cut(s) | 99, 139, 246, 377, 600, 669, 846 |
| MvaI | CCWGG | 6 cut(s) | 99, 246, 377, 600, 669, 846 |
| MvnI | CGCG | 1 cut(s) | 1011 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 35, 173, 209, 218, 233, 769, 850 |
| NciI | CCSGG | 1 cut(s) | 139 |
| NdeI | CATATG | 1 cut(s) | 1144 |
| NdeII | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| NheI | GCTAGC | 1 cut(s) | 1055 |
| NlaIII | CATG | 8 cut(s) | 463, 499, 690, 767, 857, 893, 1036, 1091 |
| NlaIV | GGNNCC | 2 cut(s) | 153, 309 |
| NmuCI | GTSAC | 4 cut(s) | 364, 856, 1165, 1192 |
| NspI | RCATGY | 4 cut(s) | 690, 767, 857, 1036 |
| NspV | TTCGAA | 1 cut(s) | 733 |
| PaeI | GCATGC | 2 cut(s) | 690, 1036 |
| PasI | CCCWGGG | 1 cut(s) | 98 |
| PceI | AGGCCT | 2 cut(s) | 375, 844 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 236 |
| PfeI | GAWTC | 3 cut(s) | 664, 672, 751 |
| PfoI | TCCNGGA | 1 cut(s) | 667 |
| PkrI | GCNGC | 9 cut(s) | 40, 223, 226, 457, 727, 904, 1069, 1150, 1209 |
| PleI | GAGTC | 1 cut(s) | 655 |
| PpsI | GAGTC | 1 cut(s) | 655 |
| Ppu21I | YACGTR | 1 cut(s) | 278 |
| Psp124BI | GAGCTC | 1 cut(s) | 169 |
| Psp6I | CCWGG | 6 cut(s) | 97, 244, 375, 598, 667, 844 |
| PspEI | GGTNACC | 1 cut(s) | 364 |
| PspGI | CCWGG | 6 cut(s) | 97, 244, 375, 598, 667, 844 |
| PspN4I | GGNNCC | 2 cut(s) | 153, 309 |
| PspPI | GGNCC | 3 cut(s) | 152, 174, 596 |
| PstI | CTGCAG | 1 cut(s) | 1069 |
| PsuI | RGATCY | 5 cut(s) | 89, 128, 307, 394, 525 |
| RsaI | GTAC | 2 cut(s) | 359, 872 |
| RsaNI | GTAC | 2 cut(s) | 358, 871 |
| SacI | GAGCTC | 1 cut(s) | 169 |
| SaqAI | TTAA | 2 cut(s) | 519, 573 |
| SatI | GCNGC | 9 cut(s) | 39, 222, 225, 456, 726, 903, 1068, 1149, 1208 |
| Sau3AI | GATC | 9 cut(s) | 89, 128, 178, 307, 353, 394, 525, 931, 970 |
| Sau96I | GGNCC | 3 cut(s) | 152, 174, 596 |
| SchI | GAGTC | 1 cut(s) | 656 |
| ScrFI | CCNGG | 7 cut(s) | 99, 139, 246, 377, 600, 669, 846 |
| SduI | GDGCHC | 3 cut(s) | 169, 252, 633 |
| SfaNI | GCATC | 4 cut(s) | 124, 245, 885, 1090 |
| SfcI | CTRYAG | 2 cut(s) | 6, 1065 |
| SfuI | TTCGAA | 1 cut(s) | 733 |
| SinI | GGWCC | 2 cut(s) | 152, 596 |
| SmlI | CTYRAG | 3 cut(s) | 61, 782, 821 |
| SmoI | CTYRAG | 3 cut(s) | 61, 782, 821 |
| SphI | GCATGC | 2 cut(s) | 690, 1036 |
| Sse9I | AATT | 7 cut(s) | 157, 186, 477, 576, 792, 988, 1047 |
| SseBI | AGGCCT | 2 cut(s) | 375, 844 |
| SsiI | CCGC | 4 cut(s) | 224, 1009, 1036, 1149 |
| SspMI | CTAG | 5 cut(s) | 303, 512, 644, 1056, 1097 |
| SstI | GAGCTC | 1 cut(s) | 169 |
| StuI | AGGCCT | 2 cut(s) | 375, 844 |
| StyD4I | CCNGG | 7 cut(s) | 97, 137, 244, 375, 598, 667, 844 |
| TaaI | ACNGT | 4 cut(s) | 10, 316, 539, 1171 |
| TaiI | ACGT | 3 cut(s) | 280, 643, 872 |
| TaqI | TCGA | 6 cut(s) | 230, 239, 483, 662, 733, 1023 |
| TaqII | GACCGA | 1 cut(s) | 37 |
| TasI | AATT | 7 cut(s) | 157, 186, 477, 576, 792, 988, 1047 |
| TauI | GCSGC | 2 cut(s) | 227, 1151 |
| TfiI | GAWTC | 3 cut(s) | 664, 672, 751 |
| Tru1I | TTAA | 2 cut(s) | 519, 573 |
| Tru9I | TTAA | 2 cut(s) | 519, 573 |
| TscAI | CASTG | 5 cut(s) | 23, 319, 753, 999, 1081 |
| TseFI | GTSAC | 4 cut(s) | 364, 856, 1165, 1192 |
| TseI | GCWGC | 7 cut(s) | 38, 221, 455, 725, 902, 1067, 1207 |
| Tsp45I | GTSAC | 4 cut(s) | 364, 856, 1165, 1192 |
| TspDTI | ATGAA | 3 cut(s) | 506, 734, 816 |
| TspRI | CASTG | 5 cut(s) | 23, 319, 753, 999, 1081 |
| VpaK11BI | GGWCC | 2 cut(s) | 152, 596 |
| XapI | RAATTY | 4 cut(s) | 157, 576, 792, 988 |
| XbaI | TCTAGA | 2 cut(s) | 643, 1096 |
| XceI | RCATGY | 4 cut(s) | 690, 767, 857, 1036 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 557 |
| XspI | CTAG | 5 cut(s) | 303, 512, 644, 1056, 1097 |