Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0015268

Physical Location & Seq

Genomic Coordinates Forward (+)

84274222 .. 84276762

Gene Structure 2541 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00062240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGGCCACCGTCTTCGGAGCCACTTCCGCCGCCATCTCAGTCTCCTCCAACTCCCGCAAACTCCACCTCCCTTCCCGTAGATCCCTCCCAGGGAGGAAAGCCAGCTTTCTTGTGGTTAGATCTGATGCCGGAGCTAACCCCAATGCTGGGCCTCGCCGCGCCGGTCAGTTGATCACCAATGCCGTTGCCACAAAAGCTGATGCTGCTGCGGCTTCCGCTCCGTCGAAACCTGGGCATGAACTTCTTCTTTTTGAAGCCTTACGAGAAGGATTGGAAGAAGAGATGGCTAGGGATCCCACTGTATGTGTAATGGGTGAAGATGTGGGCCACTACGGAGGATCGTATAAGGTGACCAAAGGCCTGGCTGATAAGTATGGGGATCTCAGGGTTCTTGATACTCCTATTGCTGAGAACTCCTTCACAGGGATGGGTATTGGAGCTGCCATGACTGGTCTGAGACCAATTATTGAGGGTATGAACATGGGTTTTCTCCTTCTAGCCTTTAACCAGATTTCCAACAACTGTGGTATGCTCCACTACACTTCTGGAGGTCAATTCAAGATACCAGTAGTCATTCGTGGACCTGGTGGAGTGGGTAGACAACTTGGGGCTGAGCACTCGCAACGTCTTGAGTCATACTTTCAGTCGATCCCTGGAATCCAAATGGTAGCATGCTCAACCCCTTACAATGCTAAAGGCTTGATGAAAGCTGCCATTCGAAGTGATAACCCTGTGATCCTTTTTGAGCATGTGTTGCTGTACAACCTGAAGGAGAGAATCCCAGATGAAGAATATGTGTGTTCTCTTGAGGAAGCTGAGATGGTGAGGCCTGGGGAGCATGTCACTATATTAACATATTCTAGGATGAGGTATCATGTGATGCAGGCTGCTAAAACTTTGGTGAACAAGGGGTATGACCCAGAAGTTATTGATATCAGGTCATTGAAACCATTTGACCTTTACACCATCGGGAACTCTGTGAAGAAAACACATAGGGTCCTGATTGTGGAGGAGTGCATGCGGACAGGTGGAATTGGTGCTAGTTTGACAGCAGCCATCACCGAGAACTTTCATGATTATTTGGATGCCCCAATTGTATGCCTGTCATCACAGGACGTGCCGACGCCATATGCTGCAACATTAGAGGAAGTGACTGTTGTCCAACCAGCTCAGATTGTGACAGCAGTTGAGGAGCTCTGCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004738 GO:0004739 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008270 GO:0008610 GO:0009058 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009856 GO:0009941 GO:0009987 GO:0010240 GO:0016053 GO:0016491 GO:0016624 GO:0016903 GO:0019752 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032787 GO:0032991 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045254 GO:0046394 GO:0046872 GO:0046914 GO:0048856 GO:0048868 GO:0051704 GO:0055114 GO:0071704 GO:0072330 GO:1901576 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C

Protein Analysis

401

Amino Acids

43.3

Weight (kDa)

6.23

Isoelectric Point (pI)

37.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transket_pyr	PF02779	85 - 255	1.7e-43	Transketolase, pyrimidine binding domain
Transketolase_C	PF02780	271 - 392	4.3e-37	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30120 AT2G34590
fragaria_vesca	FvH4_3g05390
malus_domestica	MD05G1282600.v1.1
prunus_persica	Prupe.4G082200_v2.0.a1
pyrus_communis	pycom05g26190
rosa_chinensis	RchiOBHm_Chr5g0014341
rosa_laevigata	RLG00000032100
rosa_multiflora	Rmu_ssc0000422.1_g000047
rosa_roxburghii	Rroxscaffold_1G00062240
rosa_rugosa	Rorug05G0017400
rosa_samantha	Rh5AG111700 Rh5BG108900 Rh5CG120700 Rh5DG107800
rosa_wichuraiana	Rw5G009730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	218
AccI	GTMKAC	1 cut(s)	598
AccII	CGCG	1 cut(s)	159
AciI	CCGC	7 cut(s)	27, 30, 55, 157, 209, 216, 1021
AclWI	GGATC	7 cut(s)	75, 287, 300, 346, 387, 643, 730
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	1 cut(s)	788
AcyI	GRCGYC	1 cut(s)	1124
AfaI	GTAC	1 cut(s)	761
AfiI	CCNNNNNNNGG	5 cut(s)	90, 146, 147, 423, 1006
AgsI	TTSAA	3 cut(s)	254, 559, 946
AjiI	CACGTC	1 cut(s)	1117
AjnI	CCWGG	6 cut(s)	88, 229, 360, 583, 652, 829
AluBI	AGCT	8 cut(s)	105, 134, 197, 440, 710, 815, 1169, 1195
AluI	AGCT	8 cut(s)	105, 134, 197, 440, 710, 815, 1169, 1195
Alw21I	GWGCWC	2 cut(s)	618, 1197
Alw26I	GTCTC	2 cut(s)	46, 451
AlwI	GGATC	7 cut(s)	75, 287, 300, 346, 387, 643, 730
AoxI	GGCC	5 cut(s)	3, 149, 325, 358, 827
ApeKI	GCWGC	7 cut(s)	203, 206, 440, 710, 887, 1052, 1133
Asp700I	GAANNNNTTC	2 cut(s)	243, 416
AspLEI	GCGC	1 cut(s)	161
AspS9I	GGNCC	4 cut(s)	149, 325, 581, 997
AsuHPI	GGTGA	6 cut(s)	166, 326, 361, 835, 913, 1051
AsuII	TTCGAA	1 cut(s)	718
AvaII	GGWCC	2 cut(s)	581, 997
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	292
BanII	GRGCYC	1 cut(s)	1197
BbsI	GAAGAC	1 cut(s)	4
Bbv12I	GWGCWC	2 cut(s)	618, 1197
BbvI	GCAGC	7 cut(s)	190, 193, 427, 697, 874, 1064, 1120
BccI	CCATC	6 cut(s)	41, 277, 421, 814, 974, 1064
BceAI	ACGGC	1 cut(s)	167
BciT130I	CCWGG	6 cut(s)	90, 231, 362, 585, 654, 831
BclI	TGATCA	1 cut(s)	171
BcoDI	GTCTC	2 cut(s)	46, 451
BfaI	CTAG	4 cut(s)	288, 497, 861, 1041
BglII	AGATCT	1 cut(s)	119
BlpI	GCTNAGC	1 cut(s)	612
Bme1390I	CCNGG	6 cut(s)	90, 231, 362, 585, 654, 831
Bme18I	GGWCC	2 cut(s)	581, 997
BmgBI	CACGTC	1 cut(s)	1117
BmgT120I	GGNCC	4 cut(s)	149, 325, 581, 997
BmiI	GGNNCC	3 cut(s)	19, 294, 998
BmrFI	CCNGG	6 cut(s)	90, 231, 362, 585, 654, 831
BmsI	GCATC	4 cut(s)	115, 190, 870, 1075
BoxI	GACNNNNGTC	1 cut(s)	1157
BpiI	GAAGAC	1 cut(s)	4
BpmI	CTGGAG	1 cut(s)	567
Bpu1102I	GCTNAGC	1 cut(s)	612
Bpu14I	TTCGAA	1 cut(s)	718
BpuEI	CTTGAG	2 cut(s)	650, 827
BsaHI	GRCGYC	1 cut(s)	1124
BsaI	GGTCTC	1 cut(s)	451
BsaJI	CCNNGG	5 cut(s)	88, 89, 230, 652, 830
BsaXI	ACNNNNNCTCC	2 cut(s)	51, 81
Bsc4I	CCNNNNNNNGG	5 cut(s)	90, 146, 147, 423, 1006
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	3 cut(s)	454, 566, 1201
BseBI	CCWGG	6 cut(s)	90, 231, 362, 585, 654, 831
BseDI	CCNNGG	5 cut(s)	88, 89, 230, 652, 830
BseGI	GGATG	3 cut(s)	432, 870, 1090
BseLI	CCNNNNNNNGG	5 cut(s)	90, 146, 147, 423, 1006
BseMII	CTCAG	7 cut(s)	51, 397, 399, 446, 603, 807, 1184
BseNI	ACTGG	3 cut(s)	454, 566, 1201
BseRI	GAGGAG	3 cut(s)	34, 1025, 1205
BseXI	GCAGC	7 cut(s)	190, 193, 427, 697, 874, 1064, 1120
BseYI	CCCAGC	1 cut(s)	146
Bsh1236I	CGCG	1 cut(s)	159
BshFI	GGCC	5 cut(s)	5, 151, 327, 360, 829
BsiHKAI	GWGCWC	2 cut(s)	618, 1197
BsiSI	CCGG	2 cut(s)	129, 162
BslI	CCNNNNNNNGG	5 cut(s)	90, 146, 147, 423, 1006
BsmAI	GTCTC	2 cut(s)	46, 451
BsnI	GGCC	5 cut(s)	5, 151, 327, 360, 829
Bso31I	GGTCTC	1 cut(s)	451
Bsp119I	TTCGAA	1 cut(s)	718
Bsp1286I	GDGCHC	2 cut(s)	618, 1197
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
Bsp1720I	GCTNAGC	1 cut(s)	612
BspACI	CCGC	7 cut(s)	27, 30, 55, 157, 209, 216, 1021
BspANI	GGCC	5 cut(s)	5, 151, 327, 360, 829
BspCNI	CTCAG	7 cut(s)	50, 396, 400, 447, 604, 808, 1183
BspFNI	CGCG	1 cut(s)	159
BspHI	TCATGA	1 cut(s)	1072
BspLI	GGNNCC	3 cut(s)	19, 294, 998
BspPI	GGATC	7 cut(s)	75, 287, 300, 346, 387, 643, 730
BspT104I	TTCGAA	1 cut(s)	718
BspTNI	GGTCTC	1 cut(s)	451
BsrBI	CCGCTC	1 cut(s)	218
BsrFI	RCCGGY	1 cut(s)	161
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	3 cut(s)	454, 566, 1201
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	5 cut(s)	88, 89, 230, 652, 830
BssMI	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
BssNI	GRCGYC	1 cut(s)	1124
Bst2UI	CCWGG	6 cut(s)	90, 231, 362, 585, 654, 831
Bst4CI	ACNGT	4 cut(s)	10, 301, 524, 1156
Bst6I	CTCTTC	1 cut(s)	273
BstACI	GRCGYC	1 cut(s)	1124
BstAPI	GCANNNNNTGC	1 cut(s)	754
BstAUI	TGTACA	1 cut(s)	759
BstBI	TTCGAA	1 cut(s)	718
BstC8I	GCNNGC	4 cut(s)	103, 673, 885, 1019
BstDEI	CTNAG	7 cut(s)	37, 383, 408, 455, 612, 816, 1170
BstEII	GGTNACC	1 cut(s)	349
BstF5I	GGATG	3 cut(s)	432, 870, 1090
BstFNI	CGCG	1 cut(s)	159
BstHHI	GCGC	1 cut(s)	161
BstKTI	GATC	8 cut(s)	83, 122, 174, 295, 341, 382, 651, 738
BstMAI	GTCTC	2 cut(s)	46, 451
BstMBI	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 194, 203, 209, 215, 754, 835
BstNI	CCWGG	6 cut(s)	90, 231, 362, 585, 654, 831
BstNSI	RCATGY	4 cut(s)	675, 752, 842, 1021
BstPAI	GACNNNNGTC	1 cut(s)	1157
BstPI	GGTNACC	1 cut(s)	349
BstSCI	CCNGG	6 cut(s)	88, 229, 360, 583, 652, 829
BstUI	CGCG	1 cut(s)	159
BstV1I	GCAGC	7 cut(s)	190, 193, 427, 697, 874, 1064, 1120
BstV2I	GAAGAC	1 cut(s)	4
BstX2I	RGATCY	4 cut(s)	80, 119, 292, 379
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	4 cut(s)	80, 119, 292, 379
BsuRI	GGCC	5 cut(s)	5, 151, 327, 360, 829
BtrI	CACGTC	1 cut(s)	1117
BtsCI	GGATG	3 cut(s)	432, 870, 1090
BtsIMutI	CAGTG	1 cut(s)	297
Cac8I	GCNNGC	4 cut(s)	103, 673, 885, 1019
CciI	TCATGA	1 cut(s)	1072
CfoI	GCGC	1 cut(s)	161
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	4 cut(s)	149, 325, 581, 997
CseI	GACGC	1 cut(s)	1132
CsiI	ACCWGGT	1 cut(s)	583
Csp6I	GTAC	1 cut(s)	760
CspCI	CAANNNNNGTGG	2 cut(s)	505, 540
CviAII	CATG	9 cut(s)	236, 445, 481, 672, 749, 839, 875, 1018, 1073
CviQI	GTAC	1 cut(s)	760
DdeI	CTNAG	7 cut(s)	37, 383, 408, 455, 612, 816, 1170
DpnI	GATC	8 cut(s)	82, 121, 173, 294, 340, 381, 650, 737
DpnII	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	273
EarI	CTCTTC	1 cut(s)	273
EciI	GGCGGA	1 cut(s)	16
Ecl136II	GAGCTC	1 cut(s)	1195
Eco147I	AGGCCT	2 cut(s)	360, 829
Eco24I	GRGCYC	1 cut(s)	1197
Eco31I	GGTCTC	1 cut(s)	451
Eco32I	GATATC	1 cut(s)	934
Eco47I	GGWCC	2 cut(s)	581, 997
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	1 cut(s)	788
Eco91I	GGTNACC	1 cut(s)	349
EcoICRI	GAGCTC	1 cut(s)	1195
EcoO109I	RGGNCCY	1 cut(s)	997
EcoO65I	GGTNACC	1 cut(s)	349
EcoRII	CCWGG	6 cut(s)	88, 229, 360, 583, 652, 829
EcoRV	GATATC	1 cut(s)	934
EcoT38I	GRGCYC	1 cut(s)	1197
FaeI	CATG	9 cut(s)	239, 448, 484, 675, 752, 842, 878, 1021, 1076
FatI	CATG	9 cut(s)	235, 444, 480, 671, 748, 838, 874, 1017, 1072
FauI	CCCGC	1 cut(s)	62
FauNDI	CATATG	1 cut(s)	1129
FbaI	TGATCA	1 cut(s)	171
FblI	GTMKAC	1 cut(s)	598
FokI	GGATG	3 cut(s)	439, 877, 1097
FriOI	GRGCYC	1 cut(s)	1197
FspBI	CTAG	4 cut(s)	288, 497, 861, 1041
GlaI	GCGC	1 cut(s)	160
GsaI	CCCAGC	1 cut(s)	150
GsuI	CTGGAG	1 cut(s)	567
HaeIII	GGCC	5 cut(s)	5, 151, 327, 360, 829
HapII	CCGG	2 cut(s)	129, 162
HgaI	GACGC	1 cut(s)	1132
HhaI	GCGC	1 cut(s)	161
Hin1I	GRCGYC	1 cut(s)	1124
Hin1II	CATG	9 cut(s)	239, 448, 484, 675, 752, 842, 878, 1021, 1076
Hin6I	GCGC	1 cut(s)	159
HinP1I	GCGC	1 cut(s)	159
HinfI	GANTC	3 cut(s)	632, 657, 777
HpaII	CCGG	2 cut(s)	129, 162
HphI	GGTGA	6 cut(s)	166, 326, 361, 835, 913, 1051
Hpy166II	GTNNAC	3 cut(s)	581, 599, 904
Hpy188I	TCNGA	4 cut(s)	17, 124, 456, 1173
Hpy188III	TCNNGA	8 cut(s)	392, 546, 559, 629, 806, 970, 1000, 1073
Hpy8I	GTNNAC	3 cut(s)	581, 599, 904
Hpy99I	CGWCG	2 cut(s)	226, 1126
HpyAV	CCTTC	5 cut(s)	81, 260, 427, 503, 763
HpyCH4III	ACNGT	4 cut(s)	10, 301, 524, 1156
HpyCH4IV	ACGT	2 cut(s)	625, 1116
HpyCH4V	TGCA	3 cut(s)	883, 1017, 1136
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 194, 203, 209, 215, 754, 835
HpyF3I	CTNAG	7 cut(s)	37, 383, 408, 455, 612, 816, 1170
HpySE526I	ACGT	2 cut(s)	625, 1116
Hsp92I	GRCGYC	1 cut(s)	1124
Hsp92II	CATG	9 cut(s)	239, 448, 484, 675, 752, 842, 878, 1021, 1076
HspAI	GCGC	1 cut(s)	159
Ksp22I	TGATCA	1 cut(s)	171
Kzo9I	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
LmnI	GCTCC	7 cut(s)	17, 131, 223, 437, 537, 835, 1192
Lsp1109I	GCAGC	7 cut(s)	190, 193, 427, 697, 874, 1064, 1120
LweI	GCATC	4 cut(s)	115, 190, 870, 1075
MabI	ACCWGGT	1 cut(s)	583
MaeI	CTAG	4 cut(s)	288, 497, 861, 1041
MaeII	ACGT	2 cut(s)	625, 1116
MaeIII	GTNAC	4 cut(s)	349, 841, 1150, 1177
MalI	GATC	8 cut(s)	82, 121, 173, 294, 340, 381, 650, 737
MbiI	CCGCTC	1 cut(s)	218
MboI	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
MboII	GAAGA	7 cut(s)	4, 236, 287, 290, 329, 800, 994
MfeI	CAATTG	1 cut(s)	1092
MflI	RGATCY	4 cut(s)	80, 119, 292, 379
MhlI	GDGCHC	2 cut(s)	618, 1197
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	4 cut(s)	462, 554, 1032, 1092
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	641
MmeI	TCCRAC	3 cut(s)	72, 540, 1186
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	2 cut(s)	243, 416
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	504, 851
MslI	CAYNNNNRTG	1 cut(s)	425
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	129, 162
MspR9I	CCNGG	6 cut(s)	90, 231, 362, 585, 654, 831
MunI	CAATTG	1 cut(s)	1092
MvaI	CCWGG	6 cut(s)	90, 231, 362, 585, 654, 831
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	7 cut(s)	26, 194, 203, 209, 215, 754, 835
NdeI	CATATG	1 cut(s)	1129
NdeII	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
NlaIII	CATG	9 cut(s)	239, 448, 484, 675, 752, 842, 878, 1021, 1076
NlaIV	GGNNCC	3 cut(s)	19, 294, 998
NmuCI	GTSAC	4 cut(s)	349, 841, 1150, 1177
NspI	RCATGY	4 cut(s)	675, 752, 842, 1021
NspV	TTCGAA	1 cut(s)	718
PaeI	GCATGC	2 cut(s)	675, 1021
PagI	TCATGA	1 cut(s)	1072
PasI	CCCWGGG	1 cut(s)	89
PceI	AGGCCT	2 cut(s)	360, 829
PdmI	GAANNNNTTC	2 cut(s)	243, 416
PfeI	GAWTC	2 cut(s)	657, 777
PleI	GAGTC	1 cut(s)	640
PpsI	GAGTC	1 cut(s)	640
PpuMI	RGGWCCY	1 cut(s)	997
PshAI	GACNNNNGTC	1 cut(s)	1157
Psp124BI	GAGCTC	1 cut(s)	1197
Psp5II	RGGWCCY	1 cut(s)	997
Psp6I	CCWGG	6 cut(s)	88, 229, 360, 583, 652, 829
PspEI	GGTNACC	1 cut(s)	349
PspFI	CCCAGC	1 cut(s)	146
PspGI	CCWGG	6 cut(s)	88, 229, 360, 583, 652, 829
PspN4I	GGNNCC	3 cut(s)	19, 294, 998
PspPI	GGNCC	4 cut(s)	149, 325, 581, 997
PspPPI	RGGWCCY	1 cut(s)	997
PsuI	RGATCY	4 cut(s)	80, 119, 292, 379
RsaI	GTAC	1 cut(s)	761
RsaNI	GTAC	1 cut(s)	760
RseI	CAYNNNNRTG	1 cut(s)	425
SacI	GAGCTC	1 cut(s)	1197
SaqAI	TTAA	2 cut(s)	504, 851
Sau3AI	GATC	8 cut(s)	80, 119, 171, 292, 338, 379, 648, 735
Sau96I	GGNCC	4 cut(s)	149, 325, 581, 997
SchI	GAGTC	1 cut(s)	641
ScrFI	CCNGG	6 cut(s)	90, 231, 362, 585, 654, 831
SduI	GDGCHC	2 cut(s)	618, 1197
SexAI	ACCWGGT	1 cut(s)	583
SfaNI	GCATC	4 cut(s)	115, 190, 870, 1075
SfuI	TTCGAA	1 cut(s)	718
SinI	GGWCC	2 cut(s)	581, 997
SmiMI	CAYNNNNRTG	1 cut(s)	425
SmlI	CTYRAG	2 cut(s)	629, 806
SmoI	CTYRAG	2 cut(s)	629, 806
SphI	GCATGC	2 cut(s)	675, 1021
Sse9I	AATT	4 cut(s)	462, 554, 1032, 1092
SseBI	AGGCCT	2 cut(s)	360, 829
SsiI	CCGC	7 cut(s)	27, 30, 55, 157, 209, 216, 1021
SspMI	CTAG	4 cut(s)	288, 497, 861, 1041
SstI	GAGCTC	1 cut(s)	1197
StuI	AGGCCT	2 cut(s)	360, 829
StyD4I	CCNGG	6 cut(s)	88, 229, 360, 583, 652, 829
TaaI	ACNGT	4 cut(s)	10, 301, 524, 1156
TaiI	ACGT	2 cut(s)	628, 1119
TaqI	TCGA	3 cut(s)	224, 647, 718
TasI	AATT	4 cut(s)	462, 554, 1032, 1092
TatI	WGTACW	1 cut(s)	759
TauI	GCSGC	3 cut(s)	32, 159, 212
TfiI	GAWTC	2 cut(s)	657, 777
Tru1I	TTAA	2 cut(s)	504, 851
Tru9I	TTAA	2 cut(s)	504, 851
TscAI	CASTG	1 cut(s)	304
TseFI	GTSAC	4 cut(s)	349, 841, 1150, 1177
TseI	GCWGC	7 cut(s)	203, 206, 440, 710, 887, 1052, 1133
Tsp45I	GTSAC	4 cut(s)	349, 841, 1150, 1177
TspDTI	ATGAA	5 cut(s)	252, 491, 719, 801, 1061
TspGWI	ACGGA	2 cut(s)	210, 348
TspRI	CASTG	1 cut(s)	304
VpaK11BI	GGWCC	2 cut(s)	581, 997
XceI	RCATGY	4 cut(s)	675, 752, 842, 1021
XcmI	CCANNNNNNNNNTGG	2 cut(s)	109, 542
XmiI	GTMKAC	1 cut(s)	598
XmnI	GAANNNNTTC	2 cut(s)	243, 416
XspI	CTAG	4 cut(s)	288, 497, 861, 1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.