Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0013872

Physical Location & Seq

Genomic Coordinates Forward (+)

1168187 .. 1172730

Gene Structure 4544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0017400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGTTCGCCTTCCATGTATTTCTTCTTCTTCTATCATTCACAGCCAAAGCTAAGTGTAAACATGGTTGCCTTGCCTTGGCCTCATACAATGTCTTGGATGGTTCAAACCTCACTTACATTAGCTACATCTTTAGCCAACAAATCCCTGAAATTCTCAAGTACAACCCTCAAGTCAAGAACTCTGATAGCCTCCAAACTGGTACTCGAATCAACATACCATTTTCTTGTGACTGCTTGAATAGTGATTTTTTGGGGCATACGTTCACCTACCTCACCCAATATAGTGATACCTATAACAAAGTTGCTCAAATCGCATTTGCTAATCTCACTACAGAAGAATGGGTGCATAGAGTGAACACTTACACACCAACTCAGATACCTGACAAAGCTCCAATTAATGTAACAGTGAACTGCTCTTGCGGTGATGGAAAGATATCAAAGGATTATGGGTTTTTCGTGACATATCCTCTTCGTCCCGGTGAGGGCTTGTCCTCTGTGGCCGCGGAGAGTGGTGTTCCAGCAAGGTTGCTGGAGATGTACAACAAAGGGTCCAACTTTGGTTCAGGCAATGACTTGGTCTTTGTGCCGGCAAGAGATCAAAATGGGACTTTTCCACCATATAAGTCAAGAACAGCTGGTATCTCAAGAGGAGCTATTATTGGTATATGTGCTGGAGGAGCTGCTGCTGCTCTAGCTTTGGCAATTTTCCTATTTTCTCGGGTTTATAGGAGGAAGGTAGTTGAGGCACCATTTCTTTCCACACCGTCTGAAGAGCGCTATCTTCAAATTCAACATACACATGTTTTAGCTTCTGGAATTACTTCTGAGACAACTTCTGATACAGTTGCTCTAGTTAGTGGTTCTTCTCCGGGCCTTATGGGTATAACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAGCTTTCCAAAGCTACTAATGACTTCAGCATAAAAATTGGACAGGGTGGGTTTGGAGCTGTTTATTATGCAGAACTCCGAGGCGAGAAAGCAGCAATCAAAAGGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAACTGAAGGTTCTAACACATGTTCATCATTTAAACCTGGTGCGCTTGATAGGGTATTGTGTCGAGGACTCCTTGTTCCTAGTGTATGAGTACATTGAAAATGGTAACTTAAGTCAACATTTGCATGGCTCTTCTGGTCTAGGCCCATTGCCATGGCAAACCAGGATGCAAATAGCCTTAGATTCTGCAAGAGGACTAGAATATATCCACGAACACACTGTTCCTGTCTACATTCATCGTGACATCAAGTCAGCAAACATCTTAATAGACAAAAACTTCCGCGCAAAGGTTGCAGATTTCGGGCTAACAAAACTGTCTGAATATGGAAGTGCTTCACTGCAGACACGTCTTGTGGGTACATTCGGATACATGCCTCCAGAGTATGCTCAATATGGTGATGTCTCCCCCAAAATCGACGTTTATGCTTTTGGTGTTGTACTTTTTGAATTAATATCTGCCAAGAAAGCTGTTGTGAGAACAAATGAATATGTTACTGAATCGAGAGGACTTGTTGATTTGTTTGAAAGTGTTCTCAGCCAGCCTGATCCGAGAAAAGATCTTGGTAAACTTGTCGACCCCAGGCTCAGCAGCGATGATTACTCACCTGACTCGGTCTACAAGATGGCGCAACTTGCCAGAGCTTGCACACAAGAGAATCCTCAACTCAGGCCAAGCATGAGATCAATTGTCGTTGCGCTAATGACACTTTCATCATCGACTGAGGAATGGGATGTTGGTTCGTTTTATGAAAATCACACAGATCTAGTCAATCTAATGTCAGGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004738 GO:0004739 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008270 GO:0008610 GO:0009058 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009856 GO:0009941 GO:0009987 GO:0010240 GO:0016053 GO:0016491 GO:0016624 GO:0016903 GO:0019752 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032787 GO:0032991 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045254 GO:0046394 GO:0046872 GO:0046914 GO:0048856 GO:0048868 GO:0051704 GO:0055114 GO:0071704 GO:0072330 GO:1901576 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C

Protein Analysis

614

Amino Acids

67.8

Weight (kDa)

6.22

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	153 - 196	5.9e-16	LysM domain
PK_Tyr_Ser-Thr	PF07714	317 - 584	5.4e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	318 - 582	2.4e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30100 AT4G18350
fragaria_vesca	FvH4_3g05440
malus_domestica	MD05G1282700.v1.1 MD10G1261000.v1.1
prunus_persica	Prupe.4G082000_v2.0.a1
pyrus_communis	pycom05g26210
rosa_chinensis	RchiOBHm_Chr5g0014331
rosa_laevigata	RLG00000032098
rosa_multiflora	Rmu_co8232887.1_g000001 Rmu_sc0009295.1_g000002
rosa_rugosa	Rorug05G0017400
rosa_samantha	Rh5AG111500 Rh5BG108800 Rh5CG120500 Rh5DG107500
rosa_wichuraiana	Rw5G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	745
AccI	GTMKAC	3 cut(s)	1284, 1629, 1671
AccII	CGCG	2 cut(s)	503, 1338
AciI	CCGC	4 cut(s)	420, 501, 503, 1336
AclWI	GGATC	1 cut(s)	1595
AcoI	YGGCCR	1 cut(s)	498
AcsI	RAATTY	3 cut(s)	150, 786, 1046
AcuI	CTGAAG	3 cut(s)	789, 928, 1082
AfaI	GTAC	6 cut(s)	161, 202, 539, 1148, 1414, 1494
AfeI	AGCGCT	1 cut(s)	776
AfiI	CCNNNNNNNGG	3 cut(s)	76, 482, 1342
AflII	CTTAAG	1 cut(s)	1165
AflIII	ACRYGT	3 cut(s)	799, 1075, 1400
AgsI	TTSAA	7 cut(s)	105, 238, 785, 791, 1154, 1502, 1580
AhdI	GACNNNNNGTC	1 cut(s)	1303
AjiI	CACGTC	1 cut(s)	1403
AjnI	CCWGG	3 cut(s)	1092, 1217, 1634
AjuI	GAANNNNNNNTTGG	2 cut(s)	1773, 1805
AloI	GAACNNNNNNTCC	2 cut(s)	1115, 1147
Alw26I	GTCTC	2 cut(s)	821, 1462
AlwI	GGATC	1 cut(s)	1595
Ama87I	CYCGRG	1 cut(s)	717
Aor51HI	AGCGCT	1 cut(s)	776
AoxI	GGCC	5 cut(s)	78, 498, 871, 1198, 1724
ApeKI	GCWGC	5 cut(s)	680, 683, 686, 1010, 1644
ApoI	RAATTY	3 cut(s)	150, 786, 1046
ArsI	GACNNNNNNTTYG	2 cut(s)	563, 595
AseI	ATTAAT	2 cut(s)	396, 1505
Asp700I	GAANNNNTTC	3 cut(s)	820, 1387, 1584
AspLEI	GCGC	5 cut(s)	777, 1101, 1340, 1684, 1753
AspS9I	GGNCC	3 cut(s)	549, 871, 1199
AsuC2I	CCSGG	2 cut(s)	477, 870
AsuHPI	GGTGA	6 cut(s)	256, 265, 434, 491, 1463, 1650
AvaI	CYCGRG	1 cut(s)	717
AvaII	GGWCC	1 cut(s)	549
BanI	GGYRCC	1 cut(s)	745
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbvI	GCAGC	5 cut(s)	667, 670, 673, 1022, 1656
BccI	CCATC	4 cut(s)	92, 419, 1018, 1672
BcgI	CGANNNNNNTGC	2 cut(s)	1460, 1494
BciT130I	CCWGG	3 cut(s)	1094, 1219, 1636
BciVI	GTATCC	1 cut(s)	1415
BcnI	CCSGG	2 cut(s)	477, 870
BcoDI	GTCTC	2 cut(s)	821, 1462
BfaI	CTAG	6 cut(s)	692, 851, 1136, 1196, 1253, 1820
BfmI	CTRYAG	2 cut(s)	330, 1394
BfoI	RGCGCY	1 cut(s)	778
BfrI	CTTAAG	1 cut(s)	1165
BfuI	GTATCC	1 cut(s)	1415
BglII	AGATCT	2 cut(s)	1612, 1816
BisI	GCNGC	6 cut(s)	501, 681, 684, 687, 1011, 1645
BlpI	GCTNAGC	1 cut(s)	1640
BlsI	GCNGC	6 cut(s)	502, 682, 685, 688, 1012, 1646
Bme1390I	CCNGG	5 cut(s)	477, 870, 1094, 1219, 1636
Bme18I	GGWCC	1 cut(s)	549
BmeRI	GACNNNNNGTC	1 cut(s)	1303
BmeT110I	CYCGRG	1 cut(s)	717
BmgBI	CACGTC	1 cut(s)	1403
BmgT120I	GGNCC	3 cut(s)	549, 871, 1199
BmiI	GGNNCC	2 cut(s)	550, 747
BmrFI	CCNGG	5 cut(s)	477, 870, 1094, 1219, 1636
BmsI	GCATC	1 cut(s)	1212
BpmI	CTGGAG	3 cut(s)	551, 693, 1416
Bpu1102I	GCTNAGC	1 cut(s)	1640
BpuEI	CTTGAG	3 cut(s)	140, 153, 628
BpuMI	CCSGG	2 cut(s)	477, 870
BsaJI	CCNNGG	5 cut(s)	75, 501, 997, 1208, 1634
Bsc4I	CCNNNNNNNGG	3 cut(s)	76, 482, 1342
Bse118I	RCCGGY	1 cut(s)	586
Bse1I	ACTGG	1 cut(s)	202
Bse3DI	GCAATG	2 cut(s)	574, 1202
BseBI	CCWGG	3 cut(s)	1094, 1219, 1636
BseDI	CCNNGG	5 cut(s)	75, 501, 997, 1208, 1634
BseGI	GGATG	4 cut(s)	103, 1029, 1227, 1792
BseLI	CCNNNNNNNGG	3 cut(s)	76, 482, 1342
BseMI	GCAATG	2 cut(s)	574, 1202
BseMII	CTCAG	6 cut(s)	386, 816, 1603, 1654, 1735, 1767
BseNI	ACTGG	1 cut(s)	202
BseRI	GAGGAG	2 cut(s)	663, 690
BseXI	GCAGC	5 cut(s)	667, 670, 673, 1022, 1656
Bsh1236I	CGCG	2 cut(s)	503, 1338
BshFI	GGCC	5 cut(s)	80, 500, 873, 1200, 1726
BshNI	GGYRCC	1 cut(s)	745
BsiHKCI	CYCGRG	1 cut(s)	717
BsiSI	CCGG	3 cut(s)	477, 587, 869
BslFI	GGGAC	2 cut(s)	459, 619
BslI	CCNNNNNNNGG	3 cut(s)	76, 482, 1342
BsmAI	GTCTC	2 cut(s)	821, 1462
BsmFI	GGGAC	2 cut(s)	459, 619
BsnI	GGCC	5 cut(s)	80, 500, 873, 1200, 1726
BsoBI	CYCGRG	1 cut(s)	717
Bsp1407I	TGTACA	1 cut(s)	537
Bsp143I	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
Bsp1720I	GCTNAGC	1 cut(s)	1640
Bsp19I	CCATGG	1 cut(s)	1208
BspACI	CCGC	4 cut(s)	420, 501, 503, 1336
BspANI	GGCC	5 cut(s)	80, 500, 873, 1200, 1726
BspCNI	CTCAG	6 cut(s)	385, 817, 1602, 1653, 1734, 1768
BspFNI	CGCG	2 cut(s)	503, 1338
BspLI	GGNNCC	2 cut(s)	550, 747
BspMAI	CTGCAG	1 cut(s)	1398
BspPI	GGATC	1 cut(s)	1595
BspQI	GCTCTTC	3 cut(s)	765, 912, 1192
BspT107I	GGYRCC	1 cut(s)	745
BspTI	CTTAAG	1 cut(s)	1165
BsrDI	GCAATG	2 cut(s)	574, 1202
BsrFI	RCCGGY	1 cut(s)	586
BsrGI	TGTACA	1 cut(s)	537
BsrI	ACTGG	1 cut(s)	202
BssAI	RCCGGY	1 cut(s)	586
BssECI	CCNNGG	5 cut(s)	75, 501, 997, 1208, 1634
BssMI	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
BssT1I	CCWWGG	2 cut(s)	75, 1208
Bst2UI	CCWGG	3 cut(s)	1094, 1219, 1636
Bst4CI	ACNGT	6 cut(s)	406, 765, 844, 889, 1276, 1371
Bst6I	CTCTTC	4 cut(s)	474, 765, 912, 1192
BstAFI	CTTAAG	1 cut(s)	1165
BstAPI	GCANNNNNTGC	1 cut(s)	1346
BstAUI	TGTACA	1 cut(s)	537
BstC8I	GCNNGC	4 cut(s)	588, 1035, 1595, 1699
BstDEI	CTNAG	8 cut(s)	51, 372, 825, 1234, 1589, 1640, 1721, 1776
BstDSI	CCRYGG	2 cut(s)	501, 1208
BstF5I	GGATG	4 cut(s)	103, 1029, 1227, 1792
BstFNI	CGCG	2 cut(s)	503, 1338
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	5 cut(s)	777, 1101, 1340, 1684, 1753
BstKTI	GATC	5 cut(s)	598, 1603, 1615, 1739, 1819
BstMAI	GTCTC	2 cut(s)	821, 1462
BstMBI	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
BstMWI	GCNNNNNNNGC	7 cut(s)	311, 677, 686, 692, 1346, 1520, 1688
BstNI	CCWGG	3 cut(s)	1094, 1219, 1636
BstNSI	RCATGY	3 cut(s)	803, 1079, 1429
BstSCI	CCNGG	5 cut(s)	475, 868, 1092, 1217, 1634
BstSFI	CTRYAG	2 cut(s)	330, 1394
BstUI	CGCG	2 cut(s)	503, 1338
BstV1I	GCAGC	5 cut(s)	667, 670, 673, 1022, 1656
BstX2I	RGATCY	2 cut(s)	1612, 1816
BstXI	CCANNNNNNTGG	1 cut(s)	1209
BstYI	RGATCY	2 cut(s)	1612, 1816
BsuI	GTATCC	1 cut(s)	1415
BsuRI	GGCC	5 cut(s)	80, 500, 873, 1200, 1726
BtgI	CCRYGG	2 cut(s)	501, 1208
BtgZI	GCGATG	1 cut(s)	1662
BtrI	CACGTC	1 cut(s)	1403
BtsCI	GGATG	4 cut(s)	103, 1029, 1227, 1792
BtsI	GCAGTG	1 cut(s)	1391
BtsIMutI	CAGTG	4 cut(s)	411, 906, 1272, 1391
Cac8I	GCNNGC	4 cut(s)	588, 1035, 1595, 1699
CfoI	GCGC	5 cut(s)	777, 1101, 1340, 1684, 1753
Cfr10I	RCCGGY	1 cut(s)	586
Cfr13I	GGNCC	3 cut(s)	549, 871, 1199
Cfr42I	CCGCGG	1 cut(s)	504
CsiI	ACCWGGT	1 cut(s)	1092
Csp6I	GTAC	6 cut(s)	160, 201, 538, 1147, 1413, 1493
CviAII	CATG	8 cut(s)	14, 62, 800, 1076, 1181, 1209, 1426, 1732
CviQI	GTAC	6 cut(s)	160, 201, 538, 1147, 1413, 1493
DdeI	CTNAG	8 cut(s)	51, 372, 825, 1234, 1589, 1640, 1721, 1776
DpnI	GATC	5 cut(s)	597, 1602, 1614, 1738, 1818
DpnII	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
DraI	TTTAAA	1 cut(s)	1089
DriI	GACNNNNNGTC	1 cut(s)	1303
EaeI	YGGCCR	1 cut(s)	498
Eam1104I	CTCTTC	4 cut(s)	474, 765, 912, 1192
Eam1105I	GACNNNNNGTC	1 cut(s)	1303
EarI	CTCTTC	4 cut(s)	474, 765, 912, 1192
Eco130I	CCWWGG	2 cut(s)	75, 1208
Eco32I	GATATC	1 cut(s)	435
Eco47I	GGWCC	1 cut(s)	549
Eco47III	AGCGCT	1 cut(s)	776
Eco57I	CTGAAG	3 cut(s)	789, 928, 1082
Eco88I	CYCGRG	1 cut(s)	717
EcoRI	GAATTC	1 cut(s)	1046
EcoRII	CCWGG	3 cut(s)	1092, 1217, 1634
EcoRV	GATATC	1 cut(s)	435
EcoT14I	CCWWGG	2 cut(s)	75, 1208
ErhI	CCWWGG	2 cut(s)	75, 1208
FaeI	CATG	8 cut(s)	17, 65, 803, 1079, 1184, 1212, 1429, 1735
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FaqI	GGGAC	2 cut(s)	459, 619
FatI	CATG	8 cut(s)	13, 61, 799, 1075, 1180, 1208, 1425, 1731
FauNDI	CATATG	1 cut(s)	913
FblI	GTMKAC	3 cut(s)	1284, 1629, 1671
Fnu4HI	GCNGC	6 cut(s)	501, 681, 684, 687, 1011, 1645
FokI	GGATG	4 cut(s)	110, 1036, 1234, 1799
Fsp4HI	GCNGC	6 cut(s)	501, 681, 684, 687, 1011, 1645
FspBI	CTAG	6 cut(s)	692, 851, 1136, 1196, 1253, 1820
GlaI	GCGC	5 cut(s)	776, 1100, 1339, 1683, 1752
GluI	GCNGC	6 cut(s)	501, 681, 684, 687, 1011, 1645
GsuI	CTGGAG	3 cut(s)	551, 693, 1416
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	5 cut(s)	80, 500, 873, 1200, 1726
HapII	CCGG	3 cut(s)	477, 587, 869
HhaI	GCGC	5 cut(s)	777, 1101, 1340, 1684, 1753
Hin1II	CATG	8 cut(s)	17, 65, 803, 1079, 1184, 1212, 1429, 1735
Hin6I	GCGC	5 cut(s)	775, 1099, 1338, 1682, 1751
HinP1I	GCGC	5 cut(s)	775, 1099, 1338, 1682, 1751
HincII	GTYRAC	2 cut(s)	1172, 1630
HindII	GTYRAC	2 cut(s)	1172, 1630
HinfI	GANTC	6 cut(s)	207, 1124, 1238, 1553, 1664, 1711
HpaII	CCGG	3 cut(s)	477, 587, 869
HphI	GGTGA	6 cut(s)	256, 265, 434, 491, 1463, 1650
Hpy188I	TCNGA	9 cut(s)	184, 375, 769, 826, 838, 998, 1375, 1421, 1605
Hpy188III	TCNNGA	8 cut(s)	175, 457, 627, 645, 813, 1295, 1433, 1557
Hpy99I	CGWCG	1 cut(s)	1475
HpyAV	CCTTC	3 cut(s)	19, 727, 1057
HpyCH4III	ACNGT	6 cut(s)	406, 765, 844, 889, 1276, 1371
HpyCH4IV	ACGT	3 cut(s)	260, 1402, 1473
HpyCH4V	TGCA	9 cut(s)	346, 989, 1033, 1180, 1225, 1244, 1349, 1396, 1701
HpyF10VI	GCNNNNNNNGC	7 cut(s)	311, 677, 686, 692, 1346, 1520, 1688
HpyF3I	CTNAG	8 cut(s)	51, 372, 825, 1234, 1589, 1640, 1721, 1776
HpySE526I	ACGT	3 cut(s)	260, 1402, 1473
Hsp92II	CATG	8 cut(s)	17, 65, 803, 1079, 1184, 1212, 1429, 1735
HspAI	GCGC	5 cut(s)	775, 1099, 1338, 1682, 1751
KroI	GCCGGC	1 cut(s)	586
KroNI	GCCGGC	1 cut(s)	588
KspI	CCGCGG	1 cut(s)	504
Kzo9I	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
LguI	GCTCTTC	3 cut(s)	765, 912, 1192
LmnI	GCTCC	4 cut(s)	394, 650, 677, 974
Lsp1109I	GCAGC	5 cut(s)	667, 670, 673, 1022, 1656
LweI	GCATC	1 cut(s)	1212
MabI	ACCWGGT	1 cut(s)	1092
MaeI	CTAG	6 cut(s)	692, 851, 1136, 1196, 1253, 1820
MaeII	ACGT	3 cut(s)	260, 1402, 1473
MaeIII	GTNAC	6 cut(s)	227, 400, 457, 1160, 1295, 1546
MalI	GATC	5 cut(s)	597, 1602, 1614, 1738, 1818
MboI	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
MfeI	CAATTG	1 cut(s)	1740
MflI	RGATCY	2 cut(s)	1612, 1816
MluCI	AATT	9 cut(s)	150, 393, 702, 786, 816, 954, 1046, 1502, 1740
MlyI	GAGTC	2 cut(s)	1118, 1658
MmeI	TCCRAC	1 cut(s)	576
MroNI	GCCGGC	1 cut(s)	586
MroXI	GAANNNNTTC	3 cut(s)	820, 1387, 1584
MseI	TTAA	5 cut(s)	396, 1088, 1166, 1319, 1505
MslI	CAYNNNNRTG	3 cut(s)	798, 1179, 1207
MspA1I	CMGCKG	2 cut(s)	503, 635
MspCI	CTTAAG	1 cut(s)	1165
MspI	CCGG	3 cut(s)	477, 587, 869
MspR9I	CCNGG	5 cut(s)	477, 870, 1094, 1219, 1636
MunI	CAATTG	1 cut(s)	1740
MvaI	CCWGG	3 cut(s)	1094, 1219, 1636
MvnI	CGCG	2 cut(s)	503, 1338
MwoI	GCNNNNNNNGC	7 cut(s)	311, 677, 686, 692, 1346, 1520, 1688
NaeI	GCCGGC	1 cut(s)	588
NciI	CCSGG	2 cut(s)	477, 870
NcoI	CCATGG	1 cut(s)	1208
NdeI	CATATG	1 cut(s)	913
NdeII	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
NgoMIV	GCCGGC	1 cut(s)	586
NlaIII	CATG	8 cut(s)	17, 65, 803, 1079, 1184, 1212, 1429, 1735
NlaIV	GGNNCC	2 cut(s)	550, 747
NmuCI	GTSAC	3 cut(s)	227, 457, 1295
NspI	RCATGY	3 cut(s)	803, 1079, 1429
PciI	ACATGT	2 cut(s)	799, 1075
PciSI	GCTCTTC	3 cut(s)	765, 912, 1192
PdiI	GCCGGC	1 cut(s)	588
PdmI	GAANNNNTTC	3 cut(s)	820, 1387, 1584
PfeI	GAWTC	4 cut(s)	207, 1238, 1553, 1711
PflFI	GACNNNGTC	2 cut(s)	575, 1667
PkrI	GCNGC	6 cut(s)	502, 682, 685, 688, 1012, 1646
PleI	GAGTC	2 cut(s)	1118, 1658
PpsI	GAGTC	2 cut(s)	1118, 1658
PscI	ACATGT	2 cut(s)	799, 1075
PshBI	ATTAAT	2 cut(s)	396, 1505
Psp6I	CCWGG	3 cut(s)	1092, 1217, 1634
PspGI	CCWGG	3 cut(s)	1092, 1217, 1634
PspN4I	GGNNCC	2 cut(s)	550, 747
PspPI	GGNCC	3 cut(s)	549, 871, 1199
PstI	CTGCAG	1 cut(s)	1398
PsuI	RGATCY	2 cut(s)	1612, 1816
PsyI	GACNNNGTC	2 cut(s)	575, 1667
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	6 cut(s)	161, 202, 539, 1148, 1414, 1494
RsaNI	GTAC	6 cut(s)	160, 201, 538, 1147, 1413, 1493
RseI	CAYNNNNRTG	3 cut(s)	798, 1179, 1207
SacII	CCGCGG	1 cut(s)	504
SalI	GTCGAC	1 cut(s)	1628
SapI	GCTCTTC	3 cut(s)	765, 912, 1192
SaqAI	TTAA	5 cut(s)	396, 1088, 1166, 1319, 1505
SatI	GCNGC	6 cut(s)	501, 681, 684, 687, 1011, 1645
Sau3AI	GATC	5 cut(s)	595, 1600, 1612, 1736, 1816
Sau96I	GGNCC	3 cut(s)	549, 871, 1199
SchI	GAGTC	2 cut(s)	1118, 1658
ScrFI	CCNGG	5 cut(s)	477, 870, 1094, 1219, 1636
SexAI	ACCWGGT	1 cut(s)	1092
SfaNI	GCATC	1 cut(s)	1212
SfcI	CTRYAG	2 cut(s)	330, 1394
Sfr303I	CCGCGG	1 cut(s)	504
SgrBI	CCGCGG	1 cut(s)	504
SinI	GGWCC	1 cut(s)	549
SmiMI	CAYNNNNRTG	3 cut(s)	798, 1179, 1207
SmlI	CTYRAG	4 cut(s)	155, 168, 643, 1165
SmoI	CTYRAG	4 cut(s)	155, 168, 643, 1165
Sse9I	AATT	9 cut(s)	150, 393, 702, 786, 816, 954, 1046, 1502, 1740
SsiI	CCGC	4 cut(s)	420, 501, 503, 1336
SspMI	CTAG	6 cut(s)	692, 851, 1136, 1196, 1253, 1820
StyD4I	CCNGG	5 cut(s)	475, 868, 1092, 1217, 1634
StyI	CCWWGG	2 cut(s)	75, 1208
TaaI	ACNGT	6 cut(s)	406, 765, 844, 889, 1276, 1371
TaiI	ACGT	3 cut(s)	263, 1405, 1476
TaqI	TCGA	6 cut(s)	205, 1119, 1470, 1556, 1629, 1772
TaqII	GACCGA	1 cut(s)	1657
TasI	AATT	9 cut(s)	150, 393, 702, 786, 816, 954, 1046, 1502, 1740
TatI	WGTACW	4 cut(s)	159, 537, 1146, 1492
TauI	GCSGC	1 cut(s)	503
TfiI	GAWTC	4 cut(s)	207, 1238, 1553, 1711
Tru1I	TTAA	5 cut(s)	396, 1088, 1166, 1319, 1505
Tru9I	TTAA	5 cut(s)	396, 1088, 1166, 1319, 1505
TscAI	CASTG	4 cut(s)	411, 906, 1279, 1398
TseFI	GTSAC	3 cut(s)	227, 457, 1295
TseI	GCWGC	5 cut(s)	680, 683, 686, 1010, 1644
Tsp45I	GTSAC	3 cut(s)	227, 457, 1295
TspDTI	ATGAA	6 cut(s)	930, 1070, 1280, 1554, 1755, 1818
TspRI	CASTG	4 cut(s)	411, 906, 1279, 1398
Tth111I	GACNNNGTC	2 cut(s)	575, 1667
Vha464I	CTTAAG	1 cut(s)	1165
VpaK11BI	GGWCC	1 cut(s)	549
VspI	ATTAAT	2 cut(s)	396, 1505
XapI	RAATTY	3 cut(s)	150, 786, 1046
XceI	RCATGY	3 cut(s)	803, 1079, 1429
XmiI	GTMKAC	3 cut(s)	1284, 1629, 1671
XmnI	GAANNNNTTC	3 cut(s)	820, 1387, 1584
XspI	CTAG	6 cut(s)	692, 851, 1136, 1196, 1253, 1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.