Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009295.1

Orthogroup ID

OG0013872

Physical Location & Seq

Genomic Coordinates Reverse (-)

4824 .. 6548

Gene Structure 1725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009295.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

atgggcttcccgacaagatccatcgccttgaacagaaatagaagcagcaccattcactcagctctccagtctccttcagttcttcacttcccaaaacagccctaccatccgcgagttattaccaaagaggcaactataacaccttctccaaagcctaaaaaagtaactacaacgcagcaacctccacactggaatctgcttcagagagctgcctccaccgccttggacatgttggaaggtgctttggtctcgcgtgagagccaaaaccctctccccaaaaccgccgacccacgtgtccaaatcgccgggaacttcgctccggtgccggagcaacccgtccgtcactcattgcccgtatccgggaccatacccgaatgcattagcggcgtctacgtccgtaacggagcgaaccccttacacgagccggtcgccggccaccacttcttcgacggtgacggcatggtccacgccgtcagcatcaatgacggagccgccagctacgcatgtcggttcactgaaacccaaagactggtccaggagcgggaaatcgggcgacccgttttcccaaaagccataggcgagctccacggccactccggcatcgcccgcctcgccttgttttacgcgcgcggcgctttgggcctcgtggaccccagccacggcatcggagtggccaacgccggcttagtctatttcaacgaccgcctcttggccatgtccgaggacgacatgccgtaccaagtgcggatcactccctccggcgacctcgaaacagtgggccgctacgacttcgaaacccaactggggtccacaatgatcgcccacccgaaagtcgacccggtgtccggccacctccacacgctcagctacgacgtcgtgaagaggccttacctgaaatacttccaattctccgccgacggggagaagtctccggacgtggaaatccctctggcggcgcccacaatgatgcacgacttcgccatcacagaaaacttcgtcgtgattcccgaccagcaggtggtgttcaagctgcaggagatgatcagcggcgggtcgccggtgatctacgacaagaacaagaaatccaggttcggaattctggcgaaaaatgcgacaaacgctgatgacataatttgggttgaatgcccggacactttctgcttccacttgtggaatgcgtgggaggagcctgagtccgatgaggtggttgtgatcgggtcatgcatgactccaccggactcgatatttaatgagaatgacgagtgcttgaagagtgtgttgtccgaaatccggctcaatgtgaaaaccggcgagtcgactcggaggccgattatttcggagcatgtgaacttggaggccggaatggtgaatcggaaccggctcgggagaaagactcggtatgcttatctcgccattgctgaaccgtggccaaaagtttctggtttcgccaaggtggatctttttactggccaagtaaaaaagcatatttacggggacaggaagtttggtggtgagcccttctttcttccttcgggttcatgtggggaagaagatggtgggtatattctgagctttgttcacgacgagaagacgtggaagtcggagcttcagattgtgaatgccatggatttgaagctggaagccactgtgacgctgccgtcaagagttccgtatggatttcacggcacgttcgtagactcgaaggacttgaaaaaccaggcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

574

Amino Acids

63.51

Weight (kDa)

6.24

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30100 AT4G18350
fragaria_vesca	FvH4_3g05440
malus_domestica	MD05G1282700.v1.1 MD10G1261000.v1.1
prunus_persica	Prupe.4G082000_v2.0.a1
pyrus_communis	pycom05g26210
rosa_chinensis	RchiOBHm_Chr5g0014331
rosa_laevigata	RLG00000032098
rosa_multiflora	Rmu_co8232887.1_g000001 Rmu_sc0009295.1_g000002
rosa_rugosa	Rorug05G0017400
rosa_samantha	Rh5AG111500 Rh5BG108800 Rh5CG120500 Rh5DG107500
rosa_wichuraiana	Rw5G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1006
AasI	GACNNNNNNGTC	4 cut(s)	293, 461, 1597, 1657
AatII	GACGTC	1 cut(s)	876
Acc36I	ACCTGC	1 cut(s)	1006
AccB1I	GGYRCC	2 cut(s)	322, 955
AccB7I	CCANNNNNTGG	2 cut(s)	529, 1018
AccBSI	CCGCTC	1 cut(s)	541
AccI	GTMKAC	4 cut(s)	390, 834, 1316, 1695
AccII	CGCG	5 cut(s)	112, 253, 626, 628, 630
AccIII	TCCGGA	1 cut(s)	931
AclWI	GGATC	3 cut(s)	12, 755, 1464
AcoI	YGGCCR	7 cut(s)	433, 589, 672, 711, 847, 1427, 1468
AcsI	RAATTY	1 cut(s)	1095
AcuI	CTGAAG	3 cut(s)	60, 185, 1592
AcvI	CACGTG	1 cut(s)	293
AcyI	GRCGYC	3 cut(s)	387, 873, 956
AfaI	GTAC	1 cut(s)	737
AflIII	ACRYGT	2 cut(s)	228, 292
AgsI	TTSAA	7 cut(s)	31, 697, 1027, 1142, 1270, 1633, 1711
AhdI	GACNNNNNGTC	1 cut(s)	841
AjiI	CACGTC	2 cut(s)	937, 1593
AjnI	CCWGG	3 cut(s)	534, 1085, 1716
AloI	GAACNNNNNNTCC	2 cut(s)	1067, 1099
AluBI	AGCT	9 cut(s)	62, 209, 498, 583, 867, 1030, 1572, 1606, 1636
AluI	AGCT	9 cut(s)	62, 209, 498, 583, 867, 1030, 1572, 1606, 1636
Alw21I	GWGCWC	1 cut(s)	585
Alw26I	GTCTC	3 cut(s)	75, 253, 933
AlwI	GGATC	3 cut(s)	12, 755, 1464
Ama87I	CYCGRG	1 cut(s)	1382
Aor13HI	TCCGGA	1 cut(s)	931
ApeKI	GCWGC	5 cut(s)	45, 175, 209, 1030, 1654
ApoI	RAATTY	1 cut(s)	1095
ArsI	GACNNNNNNTTYG	2 cut(s)	1487, 1519
Asp700I	GAANNNNTTC	1 cut(s)	899
AspLEI	GCGC	4 cut(s)	628, 630, 635, 958
AspS9I	GGNCC	7 cut(s)	363, 463, 532, 640, 649, 778, 807
AsuC2I	CCSGG	4 cut(s)	307, 361, 839, 1148
AsuHPI	GGTGA	4 cut(s)	464, 1072, 1378, 1523
AsuII	TTCGAA	1 cut(s)	792
AvaI	CYCGRG	1 cut(s)	1382
AvaII	GGWCC	5 cut(s)	363, 463, 532, 649, 807
BalI	TGGCCA	4 cut(s)	674, 713, 1429, 1470
BanI	GGYRCC	2 cut(s)	322, 955
BanII	GRGCYC	2 cut(s)	585, 1518
BarI	GAAGNNNNNNTAC	2 cut(s)	872, 904
BauI	CACGAG	2 cut(s)	419, 644
BbrPI	CACGTG	1 cut(s)	293
BbsI	GAAGAC	1 cut(s)	1595
Bbv12I	GWGCWC	1 cut(s)	585
BbvI	GCAGC	5 cut(s)	57, 187, 196, 1017, 1641
BccI	CCATC	4 cut(s)	29, 114, 989, 1547
BceAI	ACGGC	7 cut(s)	455, 472, 604, 676, 718, 1642, 1699
BciT130I	CCWGG	3 cut(s)	536, 1087, 1718
BciVI	GTATCC	1 cut(s)	367
BclI	TGATCA	1 cut(s)	1041
BcnI	CCSGG	4 cut(s)	307, 361, 839, 1148
BcoDI	GTCTC	3 cut(s)	75, 253, 933
BfmI	CTRYAG	1 cut(s)	1031
BfoI	RGCGCY	2 cut(s)	636, 959
BfuAI	ACCTGC	1 cut(s)	1006
BfuI	GTATCC	1 cut(s)	367
BglI	GCCNNNNNGGC	1 cut(s)	597
BlpI	GCTNAGC	1 cut(s)	863
Bme1390I	CCNGG	7 cut(s)	307, 361, 536, 839, 1087, 1148, 1718
Bme18I	GGWCC	5 cut(s)	363, 463, 532, 649, 807
BmeRI	GACNNNNNGTC	1 cut(s)	841
BmeT110I	CYCGRG	1 cut(s)	1382
BmgBI	CACGTC	2 cut(s)	937, 1593
BmgT120I	GGNCC	7 cut(s)	363, 463, 532, 640, 649, 778, 807
BmiI	GGNNCC	8 cut(s)	324, 364, 490, 651, 808, 957, 1188, 1376
BmrFI	CCNGG	7 cut(s)	307, 361, 536, 839, 1087, 1148, 1718
BmrI	ACTGGG	1 cut(s)	812
BmsI	GCATC	4 cut(s)	486, 609, 672, 957
BmuI	ACTGGG	1 cut(s)	812
BpiI	GAAGAC	1 cut(s)	1595
BplI	GAGNNNNNCTC	2 cut(s)	1378, 1410
BpmI	CTGGAG	1 cut(s)	50
Bpu1102I	GCTNAGC	1 cut(s)	863
Bpu14I	TTCGAA	1 cut(s)	792
BpuMI	CCSGG	4 cut(s)	307, 361, 839, 1148
BsaAI	YACGTR	1 cut(s)	293
BsaHI	GRCGYC	3 cut(s)	387, 873, 956
BsaI	GGTCTC	1 cut(s)	253
BsaJI	CCNNGG	7 cut(s)	222, 586, 658, 720, 1424, 1449, 1623
BsaWI	WCCGGW	3 cut(s)	319, 931, 1234
BsaXI	ACNNNNNCTCC	6 cut(s)	130, 160, 578, 608, 1178, 1208
Bse118I	RCCGGY	6 cut(s)	424, 431, 680, 1057, 1307, 1377
Bse1I	ACTGG	5 cut(s)	67, 194, 534, 807, 1471
Bse3DI	GCAATG	2 cut(s)	347, 1413
BseAI	TCCGGA	1 cut(s)	931
BseBI	CCWGG	3 cut(s)	536, 1087, 1718
BseDI	CCNNGG	7 cut(s)	222, 586, 658, 720, 1424, 1449, 1623
BseGI	GGATG	1 cut(s)	106
BseMI	GCAATG	2 cut(s)	347, 1413
BseMII	CTCAG	4 cut(s)	72, 877, 1182, 1559
BseNI	ACTGG	5 cut(s)	67, 194, 534, 807, 1471
BsePI	GCGCGC	1 cut(s)	626
BseRI	GAGGAG	1 cut(s)	1199
BseXI	GCAGC	5 cut(s)	57, 187, 196, 1017, 1641
BseYI	CCCAGC	1 cut(s)	653
Bsh1236I	CGCG	5 cut(s)	112, 253, 626, 628, 630
Bsh1285I	CGRYCG	2 cut(s)	429, 703
BshNI	GGYRCC	2 cut(s)	322, 955
BsiEI	CGRYCG	2 cut(s)	429, 703
BsiHKAI	GWGCWC	1 cut(s)	585
BsiHKCI	CYCGRG	1 cut(s)	1382
BslFI	GGGAC	2 cut(s)	376, 1508
BsmAI	GTCTC	3 cut(s)	75, 253, 933
BsmFI	GGGAC	2 cut(s)	376, 1508
BsmI	GAATGC	4 cut(s)	380, 1148, 1180, 1624
Bso31I	GGTCTC	1 cut(s)	253
BsoBI	CYCGRG	1 cut(s)	1382
Bsp119I	TTCGAA	1 cut(s)	792
Bsp1286I	GDGCHC	2 cut(s)	585, 1518
Bsp13I	TCCGGA	1 cut(s)	931
Bsp143I	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
Bsp1720I	GCTNAGC	1 cut(s)	863
Bsp19I	CCATGG	1 cut(s)	1623
BspCNI	CTCAG	4 cut(s)	71, 876, 1183, 1560
BspEI	TCCGGA	1 cut(s)	931
BspFNI	CGCG	5 cut(s)	112, 253, 626, 628, 630
BspLI	GGNNCC	8 cut(s)	324, 364, 490, 651, 808, 957, 1188, 1376
BspMAI	CTGCAG	1 cut(s)	1035
BspMI	ACCTGC	1 cut(s)	1006
BspPI	GGATC	3 cut(s)	12, 755, 1464
BspT104I	TTCGAA	1 cut(s)	792
BspT107I	GGYRCC	2 cut(s)	322, 955
BspTNI	GGTCTC	1 cut(s)	253
BsrBI	CCGCTC	1 cut(s)	541
BsrDI	GCAATG	2 cut(s)	347, 1413
BsrFI	RCCGGY	6 cut(s)	424, 431, 680, 1057, 1307, 1377
BsrI	ACTGG	5 cut(s)	67, 194, 534, 807, 1471
BssAI	RCCGGY	6 cut(s)	424, 431, 680, 1057, 1307, 1377
BssECI	CCNNGG	7 cut(s)	222, 586, 658, 720, 1424, 1449, 1623
BssHII	GCGCGC	1 cut(s)	626
BssMI	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
BssNI	GRCGYC	3 cut(s)	387, 873, 956
BssSI	CACGAG	2 cut(s)	419, 644
BssT1I	CCWWGG	3 cut(s)	222, 1449, 1623
Bst2BI	CACGAG	2 cut(s)	419, 644
Bst2UI	CCWGG	3 cut(s)	536, 1087, 1718
Bst4CI	ACNGT	4 cut(s)	452, 775, 1425, 1648
Bst6I	CTCTTC	2 cut(s)	875, 1265
BstACI	GRCGYC	3 cut(s)	387, 873, 956
BstBAI	YACGTR	1 cut(s)	293
BstBI	TTCGAA	1 cut(s)	792
BstC8I	GCNNGC	6 cut(s)	433, 496, 581, 607, 628, 682
BstDEI	CTNAG	5 cut(s)	58, 685, 863, 1191, 1568
BstDSI	CCRYGG	4 cut(s)	586, 658, 1424, 1623
BstF5I	GGATG	1 cut(s)	106
BstFNI	CGCG	5 cut(s)	112, 253, 626, 628, 630
BstH2I	RGCGCY	2 cut(s)	636, 959
BstHHI	GCGC	4 cut(s)	628, 630, 635, 958
BstKTI	GATC	7 cut(s)	20, 750, 819, 1044, 1065, 1215, 1459
BstMAI	GTCTC	3 cut(s)	75, 253, 933
BstMBI	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
BstMCI	CGRYCG	2 cut(s)	429, 703
BstNI	CCWGG	3 cut(s)	536, 1087, 1718
BstNSI	RCATGY	4 cut(s)	232, 507, 733, 1346
BstSCI	CCNGG	7 cut(s)	305, 359, 534, 837, 1085, 1146, 1716
BstSFI	CTRYAG	1 cut(s)	1031
BstUI	CGCG	5 cut(s)	112, 253, 626, 628, 630
BstV1I	GCAGC	5 cut(s)	57, 187, 196, 1017, 1641
BstV2I	GAAGAC	1 cut(s)	1595
BstX2I	RGATCY	2 cut(s)	17, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	223
BstYI	RGATCY	2 cut(s)	17, 1456
BsuI	GTATCC	1 cut(s)	367
BtgI	CCRYGG	4 cut(s)	586, 658, 1424, 1623
BtgZI	GCGATG	2 cut(s)	7, 586
BtrI	CACGTC	2 cut(s)	937, 1593
BtsCI	GGATG	1 cut(s)	106
BtsIMutI	CAGTG	4 cut(s)	187, 513, 780, 1644
BveI	ACCTGC	1 cut(s)	1006
Cac8I	GCNNGC	6 cut(s)	433, 496, 581, 607, 628, 682
CfoI	GCGC	4 cut(s)	628, 630, 635, 958
Cfr10I	RCCGGY	6 cut(s)	424, 431, 680, 1057, 1307, 1377
Cfr13I	GGNCC	7 cut(s)	363, 463, 532, 640, 649, 778, 807
CseI	GACGC	2 cut(s)	376, 1660
Csp6I	GTAC	1 cut(s)	736
CviQI	GTAC	1 cut(s)	736
DdeI	CTNAG	5 cut(s)	58, 685, 863, 1191, 1568
DinI	GGCGCC	1 cut(s)	957
DpnI	GATC	7 cut(s)	19, 749, 818, 1043, 1064, 1214, 1458
DpnII	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
DrdI	GACNNNNNNGTC	4 cut(s)	293, 461, 1597, 1657
DriI	GACNNNNNGTC	1 cut(s)	841
DseDI	GACNNNNNNGTC	4 cut(s)	293, 461, 1597, 1657
EaeI	YGGCCR	7 cut(s)	433, 589, 672, 711, 847, 1427, 1468
Eam1104I	CTCTTC	2 cut(s)	875, 1265
Eam1105I	GACNNNNNGTC	1 cut(s)	841
EarI	CTCTTC	2 cut(s)	875, 1265
EciI	GGCGGA	1 cut(s)	901
Ecl136II	GAGCTC	1 cut(s)	583
Eco130I	CCWWGG	3 cut(s)	222, 1449, 1623
Eco147I	AGGCCT	1 cut(s)	886
Eco24I	GRGCYC	2 cut(s)	585, 1518
Eco31I	GGTCTC	1 cut(s)	253
Eco47I	GGWCC	5 cut(s)	363, 463, 532, 649, 807
Eco53kI	GAGCTC	1 cut(s)	583
Eco57I	CTGAAG	3 cut(s)	60, 185, 1592
Eco72I	CACGTG	1 cut(s)	293
Eco88I	CYCGRG	1 cut(s)	1382
EcoICRI	GAGCTC	1 cut(s)	583
EcoRI	GAATTC	1 cut(s)	1095
EcoRII	CCWGG	3 cut(s)	534, 1085, 1716
EcoT14I	CCWWGG	3 cut(s)	222, 1449, 1623
EcoT22I	ATGCAT	2 cut(s)	380, 1226
EcoT38I	GRGCYC	2 cut(s)	585, 1518
EgeI	GGCGCC	1 cut(s)	957
EheI	GGCGCC	1 cut(s)	957
ErhI	CCWWGG	3 cut(s)	222, 1449, 1623
FaqI	GGGAC	2 cut(s)	376, 1508
FauI	CCCGC	3 cut(s)	534, 614, 1043
FbaI	TGATCA	1 cut(s)	1041
FblI	GTMKAC	4 cut(s)	390, 834, 1316, 1695
FokI	GGATG	1 cut(s)	93
FriOI	GRGCYC	2 cut(s)	585, 1518
GlaI	GCGC	4 cut(s)	627, 629, 634, 957
GsaI	CCCAGC	1 cut(s)	657
GsuI	CTGGAG	1 cut(s)	50
HaeII	RGCGCY	2 cut(s)	636, 959
HgaI	GACGC	2 cut(s)	376, 1660
HhaI	GCGC	4 cut(s)	628, 630, 635, 958
Hin1I	GRCGYC	3 cut(s)	387, 873, 956
Hin6I	GCGC	4 cut(s)	626, 628, 633, 956
HinP1I	GCGC	4 cut(s)	626, 628, 633, 956
HincII	GTYRAC	2 cut(s)	835, 1317
HindII	GTYRAC	2 cut(s)	835, 1317
HphI	GGTGA	4 cut(s)	464, 1072, 1378, 1523
Hpy188III	TCNNGA	8 cut(s)	10, 877, 932, 1000, 1007, 1384, 1580, 1662
Hpy99I	CGWCG	6 cut(s)	452, 875, 878, 920, 1001, 1586
HpyAV	CCTTC	6 cut(s)	84, 153, 230, 1528, 1539, 1696
HpyCH4III	ACNGT	4 cut(s)	452, 775, 1425, 1648
HpyCH4IV	ACGT	6 cut(s)	292, 393, 873, 936, 1592, 1688
HpyCH4V	TGCA	4 cut(s)	378, 970, 1033, 1224
HpyF3I	CTNAG	5 cut(s)	58, 685, 863, 1191, 1568
HpySE526I	ACGT	6 cut(s)	292, 393, 873, 936, 1592, 1688
Hsp92I	GRCGYC	3 cut(s)	387, 873, 956
HspAI	GCGC	4 cut(s)	626, 628, 633, 956
KasI	GGCGCC	1 cut(s)	955
Kpn2I	TCCGGA	1 cut(s)	931
KroI	GCCGGC	2 cut(s)	431, 680
KroNI	GCCGGC	2 cut(s)	433, 682
Ksp22I	TGATCA	1 cut(s)	1041
Kzo9I	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
LmnI	GCTCC	9 cut(s)	322, 328, 404, 488, 538, 588, 1186, 1339, 1603
Lsp1109I	GCAGC	5 cut(s)	57, 187, 196, 1017, 1641
LweI	GCATC	4 cut(s)	486, 609, 672, 957
MaeII	ACGT	6 cut(s)	292, 393, 873, 936, 1592, 1688
MaeIII	GTNAC	5 cut(s)	163, 341, 398, 452, 1648
MalI	GATC	7 cut(s)	19, 749, 818, 1043, 1064, 1214, 1458
MauBI	CGCGCGCG	1 cut(s)	626
MbiI	CCGCTC	1 cut(s)	541
MboI	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
MboII	GAAGA	8 cut(s)	74, 436, 892, 1282, 1517, 1559, 1562, 1600
MflI	RGATCY	2 cut(s)	17, 1456
MhlI	GDGCHC	2 cut(s)	585, 1518
MlsI	TGGCCA	4 cut(s)	674, 713, 1429, 1470
MluCI	AATT	3 cut(s)	905, 1095, 1131
MluNI	TGGCCA	4 cut(s)	674, 713, 1429, 1470
Mly113I	GGCGCC	1 cut(s)	956
MlyI	GAGTC	7 cut(s)	1202, 1222, 1232, 1312, 1322, 1387, 1691
MmeI	TCCRAC	2 cut(s)	213, 1581
Mox20I	TGGCCA	4 cut(s)	674, 713, 1429, 1470
Mph1103I	ATGCAT	2 cut(s)	380, 1226
MroI	TCCGGA	1 cut(s)	931
MroNI	GCCGGC	2 cut(s)	431, 680
MroXI	GAANNNNTTC	1 cut(s)	899
MscI	TGGCCA	4 cut(s)	674, 713, 1429, 1470
MseI	TTAA	1 cut(s)	1248
MslI	CAYNNNNRTG	2 cut(s)	668, 965
Msp20I	TGGCCA	4 cut(s)	674, 713, 1429, 1470
MspA1I	CMGCKG	1 cut(s)	1047
MspR9I	CCNGG	7 cut(s)	307, 361, 536, 839, 1087, 1148, 1718
MteI	GCGCNGCGC	1 cut(s)	631
Mva1269I	GAATGC	4 cut(s)	380, 1148, 1180, 1624
MvaI	CCWGG	3 cut(s)	536, 1087, 1718
MvnI	CGCG	5 cut(s)	112, 253, 626, 628, 630
NaeI	GCCGGC	2 cut(s)	433, 682
NarI	GGCGCC	1 cut(s)	956
NciI	CCSGG	4 cut(s)	307, 361, 839, 1148
NcoI	CCATGG	1 cut(s)	1623
NdeII	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
NgoMIV	GCCGGC	2 cut(s)	431, 680
NlaIV	GGNNCC	8 cut(s)	324, 364, 490, 651, 808, 957, 1188, 1376
NmuCI	GTSAC	3 cut(s)	341, 452, 1648
NsiI	ATGCAT	2 cut(s)	380, 1226
NspI	RCATGY	4 cut(s)	232, 507, 733, 1346
NspV	TTCGAA	1 cut(s)	792
PaqCI	CACCTGC	1 cut(s)	1006
PauI	GCGCGC	1 cut(s)	626
PceI	AGGCCT	1 cut(s)	886
PciI	ACATGT	1 cut(s)	228
PcsI	WCGNNNNNNNCGW	3 cut(s)	555, 1005, 1689
PctI	GAATGC	4 cut(s)	380, 1148, 1180, 1624
PdiI	GCCGGC	2 cut(s)	433, 682
PdmI	GAANNNNTTC	1 cut(s)	899
PfeI	GAWTC	3 cut(s)	193, 1003, 1369
PflMI	CCANNNNNTGG	2 cut(s)	529, 1018
PfoI	TCCNGGA	2 cut(s)	359, 534
PleI	GAGTC	7 cut(s)	1201, 1222, 1232, 1312, 1321, 1387, 1691
PluTI	GGCGCC	1 cut(s)	959
PmaCI	CACGTG	1 cut(s)	293
PmlI	CACGTG	1 cut(s)	293
PpsI	GAGTC	7 cut(s)	1201, 1222, 1232, 1312, 1321, 1387, 1691
Ppu21I	YACGTR	1 cut(s)	293
PscI	ACATGT	1 cut(s)	228
Psp124BI	GAGCTC	1 cut(s)	585
Psp6I	CCWGG	3 cut(s)	534, 1085, 1716
PspCI	CACGTG	1 cut(s)	293
PspFI	CCCAGC	1 cut(s)	653
PspGI	CCWGG	3 cut(s)	534, 1085, 1716
PspN4I	GGNNCC	8 cut(s)	324, 364, 490, 651, 808, 957, 1188, 1376
PspPI	GGNCC	7 cut(s)	363, 463, 532, 640, 649, 778, 807
PstI	CTGCAG	1 cut(s)	1035
PsuI	RGATCY	2 cut(s)	17, 1456
PteI	GCGCGC	1 cut(s)	626
RsaI	GTAC	1 cut(s)	737
RsaNI	GTAC	1 cut(s)	736
RseI	CAYNNNNRTG	2 cut(s)	668, 965
SacI	GAGCTC	1 cut(s)	585
SalI	GTCGAC	2 cut(s)	833, 1315
SaqAI	TTAA	1 cut(s)	1248
Sau3AI	GATC	7 cut(s)	17, 747, 816, 1041, 1062, 1212, 1456
Sau96I	GGNCC	7 cut(s)	363, 463, 532, 640, 649, 778, 807
SchI	GAGTC	7 cut(s)	1202, 1222, 1232, 1312, 1322, 1387, 1691
ScrFI	CCNGG	7 cut(s)	307, 361, 536, 839, 1087, 1148, 1718
SduI	GDGCHC	2 cut(s)	585, 1518
SfaNI	GCATC	4 cut(s)	486, 609, 672, 957
SfcI	CTRYAG	1 cut(s)	1031
SfoI	GGCGCC	1 cut(s)	957
SfuI	TTCGAA	1 cut(s)	792
SgrAI	CRCCGGYG	1 cut(s)	1057
SinI	GGWCC	5 cut(s)	363, 463, 532, 649, 807
SmiMI	CAYNNNNRTG	2 cut(s)	668, 965
Sse9I	AATT	3 cut(s)	905, 1095, 1131
SseBI	AGGCCT	1 cut(s)	886
SspDI	GGCGCC	1 cut(s)	955
SstI	GAGCTC	1 cut(s)	585
StuI	AGGCCT	1 cut(s)	886
StyD4I	CCNGG	7 cut(s)	305, 359, 534, 837, 1085, 1146, 1716
StyI	CCWWGG	3 cut(s)	222, 1449, 1623
TaaI	ACNGT	4 cut(s)	452, 775, 1425, 1648
TaiI	ACGT	6 cut(s)	295, 396, 876, 939, 1595, 1691
TaqI	TCGA	7 cut(s)	447, 768, 792, 834, 1241, 1316, 1700
TasI	AATT	3 cut(s)	905, 1095, 1131
TauI	GCSGC	6 cut(s)	387, 494, 633, 783, 956, 1050
TfiI	GAWTC	3 cut(s)	193, 1003, 1369
Tru1I	TTAA	1 cut(s)	1248
Tru9I	TTAA	1 cut(s)	1248
TscAI	CASTG	4 cut(s)	194, 520, 780, 1651
TseFI	GTSAC	3 cut(s)	341, 452, 1648
TseI	GCWGC	5 cut(s)	45, 175, 209, 1030, 1654
Tsp45I	GTSAC	3 cut(s)	341, 452, 1648
TspDTI	ATGAA	1 cut(s)	1527
TspGWI	ACGGA	5 cut(s)	329, 386, 417, 501, 1659
TspRI	CASTG	4 cut(s)	194, 520, 780, 1651
Van91I	CCANNNNNTGG	2 cut(s)	529, 1018
VpaK11BI	GGWCC	5 cut(s)	363, 463, 532, 649, 807
XapI	RAATTY	1 cut(s)	1095
XceI	RCATGY	4 cut(s)	232, 507, 733, 1346
XmiI	GTMKAC	4 cut(s)	390, 834, 1316, 1695
XmnI	GAANNNNTTC	1 cut(s)	899
ZraI	GACGTC	1 cut(s)	874
Zsp2I	ATGCAT	2 cut(s)	380, 1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.