Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0013872

Physical Location & Seq

Genomic Coordinates Reverse (-)

27505147 .. 27506964

Gene Structure 1818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g26210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCAACTCTTCCAAAAGCACCCAACTCTAATAGTTGGGCAAAAATGCATCACTCTTTCTCTTCTTCTTCTTCCTCATCAGTAGTGGATCCTATGGGCTTCCCAAAAAGGTCCATCTTCTTGAAGAGCAGCAAAAACCGCAGAAGTTCTAGTAGCATTCACTGTGCTTTGCAATCTCCCTCGGTTCTTCACTTCCCAAAACAACCCTACAACACACCAGTAGTTACCAAGGAAGCCACTCCTGCAAAACCCAGAACACATCAGCTTCCACAGTGGAACTTACTACAGAAAGCAGCTGCCATGGCGATCGACATGGTCGAAGGAGCGTTAGTCTCACGCGAGCGCCAAAACCCACTTCCCAAAACCTCAGACCCACGTGTCCAAATCGCCGGAAACTACGCTCCGGTGCCGGAACAAGCCGTCCGCCACTGCTTACCAATTACCGGCACCATACCTGACTGCATTAACGGCGTCTACCTCCGCAACGGCGCCAACCCTTTACACGAGCCCGTGGCCGGACACCACCTTTTCGACGGCGACGGCATGGTTCACGCCGTCAGCATCGATTCCGGATCGGCCAGCTACGCCTGCCGGTTCACGGAGACCCAGAGGCTCGTCCAAGAAAGGGAAATGGGGCGACCCGTTTTCCCCAAAGCCATCGGCGAGCTCCACGGCCACTCCGGCATCGCTCGCCTCCTCTTATTTTTCGCACGTGGGGCCTTAGGCCTCCTCGACAAAAACCACGGCACTGGCGTCGCAAACGCTGGCCTCGTCTACCACAACGGCCGCCTCTTGGCCATGTCGGAAGACGACTTGCCGTACCATGTCCGGGTCACTAAATCCGGGGACCTCGAAACGGTGGGTCGTTACGATTTCGACAGCCAGCTGGGGTCCACAATGATCGCACACCCGAAGGTCGACCCGGAATCCGGCTTCCTCCACGCGCTCAGCTACGATGTTGTTCAGAAGCCGTATTTAAAATACTTCCACTTCAGCCCCAACGGCGCGAAATCCCCGGACGTGGAGATCCCATTGGCAGGGCCCACCATGATGCATGACTTTGCGATCACCGAGAACTACGTGGTGATCCCGGACCAGCAGGTCGTGTTCAAGCTCGGAGACATGATCACGGGTGGGTCCCCCGTGATCTACGACAAGAGCAAGATGTCGCGGTTCGGAATTCTTAAGAAGAATGCCGACAACGCCGACGACATCATCTGGGTCGACTCTCCCGACACGTTCTGCTTCCACCTCTGGAACGCCTGGGAGGAGCCCGAGTCCGATGAGGTCGTCGTGATCGGCTCCTGCATGACGCCGCCGGACTCGATCTTCAACGAGTGCGACGAGAACTTAAAGAGCGTGCTGTCCGAAATCAGGCTCAATTTGAAAACCGGCGAGTCGAATCGGCGGGCTATTTTGTCTGAATCGGATGATGTGAATTTGGAGGCGGGAATGGTAAATCGGAACTTACTCGGGAGGAAAACGCGGTTCGCTTACCTCGCAATTGCCGAACCCTGGCCTAAAGTTTCGGGTTTTGCTAAAGTTGATCTTTTTACCGGGGAGGTGAAAGAGTTTTTTTACGGCGAGAAAATGTACGGCGGTGAGCCCTTTTTCGTGCCGAGCACGGAAGAGGGCGCGTCGGAGGACGACGGTTACATTCTGACGTTCGTTCACGACGAGAAGAACTGGAAGTCGGAGCTTCAGATTGTTAACGCGGTCAATATGAAGTTGGAGGCTACGGTAAAATTACCTTCAAGGGTGCCCTACGGGTTTCATGGGACGTTTATAGAATCGAAGGACTTGGTAAATCAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

606

Amino Acids

66.86

Weight (kDa)

6.06

Isoelectric Point (pI)

48.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	134 - 596	1.4e-130	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30100 AT4G18350
fragaria_vesca	FvH4_3g05440
malus_domestica	MD05G1282700.v1.1 MD10G1261000.v1.1
prunus_persica	Prupe.4G082000_v2.0.a1
pyrus_communis	pycom05g26210
rosa_chinensis	RchiOBHm_Chr5g0014331
rosa_laevigata	RLG00000032098
rosa_multiflora	Rmu_co8232887.1_g000001 Rmu_sc0009295.1_g000002
rosa_rugosa	Rorug05G0017400
rosa_samantha	Rh5AG111500 Rh5BG108800 Rh5CG120500 Rh5DG107500
rosa_wichuraiana	Rw5G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	377, 1100
Acc36I	ACCTGC	1 cut(s)	1090
AccB1I	GGYRCC	4 cut(s)	406, 446, 488, 1759
AccI	GTMKAC	4 cut(s)	474, 774, 918, 1224
AccII	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
AccIII	TCCGGA	1 cut(s)	569
AclWI	GGATC	5 cut(s)	83, 96, 580, 1021, 1081
AcoI	YGGCCR	5 cut(s)	513, 576, 673, 784, 795
AcsI	RAATTY	2 cut(s)	1179, 1438
AcuI	CTGAAG	2 cut(s)	976, 1685
AcvI	CACGTG	2 cut(s)	377, 713
AcyI	GRCGYC	4 cut(s)	471, 489, 753, 1313
AfaI	GTAC	2 cut(s)	821, 1595
AflII	CTTAAG	1 cut(s)	1184
AflIII	ACRYGT	2 cut(s)	376, 1236
AgsI	TTSAA	5 cut(s)	124, 1111, 1333, 1387, 1755
AjiI	CACGTC	1 cut(s)	1021
AjnI	CCWGG	2 cut(s)	1262, 1514
AjuI	GAANNNNNNNTTGG	2 cut(s)	339, 371
AloI	GAACNNNNNNTCC	2 cut(s)	405, 437
AluBI	AGCT	8 cut(s)	265, 296, 582, 667, 886, 951, 1114, 1699
AluI	AGCT	8 cut(s)	265, 296, 582, 667, 886, 951, 1114, 1699
Alw21I	GWGCWC	2 cut(s)	669, 1625
Alw26I	GTCTC	3 cut(s)	337, 596, 1113
AlwI	GGATC	5 cut(s)	83, 96, 580, 1021, 1081
Ama87I	CYCGRG	2 cut(s)	1274, 1472
Aor13HI	TCCGGA	1 cut(s)	569
ApaI	GGGCCC	1 cut(s)	1044
ApeKI	GCWGC	3 cut(s)	129, 293, 296
ApoI	RAATTY	2 cut(s)	1179, 1438
AspLEI	GCGC	5 cut(s)	345, 491, 946, 1007, 1637
AspS9I	GGNCC	8 cut(s)	111, 717, 847, 891, 1040, 1041, 1093, 1137
AsuC2I	CCSGG	6 cut(s)	830, 844, 923, 1016, 1091, 1558
AsuHPI	GGTGA	4 cut(s)	1060, 1096, 1576, 1613
AvaI	CYCGRG	2 cut(s)	1274, 1472
AvaII	GGWCC	5 cut(s)	111, 847, 891, 1093, 1137
AxyI	CCTNAGG	1 cut(s)	721
BaeGI	GKGCMC	2 cut(s)	1044, 1764
BalI	TGGCCA	1 cut(s)	797
BamHI	GGATCC	1 cut(s)	88
BanI	GGYRCC	4 cut(s)	406, 446, 488, 1759
BanII	GRGCYC	5 cut(s)	510, 669, 1044, 1275, 1608
BauI	CACGAG	1 cut(s)	503
BbrPI	CACGTG	2 cut(s)	377, 713
BbsI	GAAGAC	1 cut(s)	813
Bbv12I	GWGCWC	2 cut(s)	669, 1625
BbvI	GCAGC	3 cut(s)	141, 283, 305
BccI	CCATC	2 cut(s)	122, 665
BcgI	CGANNNNNNTGC	2 cut(s)	736, 770
BciT130I	CCWGG	2 cut(s)	1264, 1516
BclI	TGATCA	1 cut(s)	1125
BcnI	CCSGG	6 cut(s)	830, 844, 923, 1016, 1091, 1558
BcoDI	GTCTC	3 cut(s)	337, 596, 1113
BfaI	CTAG	1 cut(s)	150
BfmI	CTRYAG	1 cut(s)	284
BfoI	RGCGCY	2 cut(s)	346, 492
BfrI	CTTAAG	1 cut(s)	1184
BfuAI	ACCTGC	1 cut(s)	1090
BglI	GCCNNNNNGGC	2 cut(s)	681, 1002
BisI	GCNGC	5 cut(s)	130, 294, 297, 787, 1316
BlpI	GCTNAGC	1 cut(s)	947
BlsI	GCNGC	5 cut(s)	131, 295, 298, 788, 1317
Bme1390I	CCNGG	8 cut(s)	830, 844, 923, 1016, 1091, 1264, 1516, 1558
Bme18I	GGWCC	5 cut(s)	111, 847, 891, 1093, 1137
BmeT110I	CYCGRG	2 cut(s)	1274, 1472
BmgBI	CACGTC	1 cut(s)	1021
BmgT120I	GGNCC	8 cut(s)	111, 717, 847, 891, 1040, 1041, 1093, 1137
BmrFI	CCNGG	8 cut(s)	830, 844, 923, 1016, 1091, 1264, 1516, 1558
BmsI	GCATC	4 cut(s)	58, 570, 693, 1041
BpiI	GAAGAC	1 cut(s)	813
Bpu1102I	GCTNAGC	1 cut(s)	947
BpuMI	CCSGG	6 cut(s)	830, 844, 923, 1016, 1091, 1558
Bsa29I	ATCGAT	1 cut(s)	564
BsaAI	YACGTR	3 cut(s)	377, 713, 1081
BsaHI	GRCGYC	4 cut(s)	471, 489, 753, 1313
BsaI	GGTCTC	1 cut(s)	596
BsaWI	WCCGGW	2 cut(s)	403, 569
BsaXI	ACNNNNNCTCC	6 cut(s)	315, 345, 662, 692, 1262, 1292
Bse118I	RCCGGY	3 cut(s)	443, 591, 1391
Bse1I	ACTGG	3 cut(s)	218, 754, 1691
Bse21I	CCTNAGG	1 cut(s)	721
BseAI	TCCGGA	1 cut(s)	569
BseBI	CCWGG	2 cut(s)	1264, 1516
BseCI	ATCGAT	1 cut(s)	564
BseGI	GGATG	1 cut(s)	1435
BseMII	CTCAG	2 cut(s)	381, 961
BseNI	ACTGG	3 cut(s)	218, 754, 1691
BseRI	GAGGAG	3 cut(s)	686, 719, 1283
BseSI	GKGCMC	2 cut(s)	1044, 1764
BseX3I	CGGCCG	1 cut(s)	784
BseXI	GCAGC	3 cut(s)	141, 283, 305
BseYI	CCCAGC	1 cut(s)	886
Bsh1236I	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
Bsh1285I	CGRYCG	2 cut(s)	309, 787
BshNI	GGYRCC	4 cut(s)	406, 446, 488, 1759
BshVI	ATCGAT	1 cut(s)	564
BsiEI	CGRYCG	2 cut(s)	309, 787
BsiHKAI	GWGCWC	2 cut(s)	669, 1625
BsiHKCI	CYCGRG	2 cut(s)	1274, 1472
BslFI	GGGAC	3 cut(s)	860, 1123, 1792
BsmAI	GTCTC	3 cut(s)	337, 596, 1113
BsmFI	GGGAC	3 cut(s)	860, 1123, 1792
BsmI	GAATGC	2 cut(s)	156, 1198
Bso31I	GGTCTC	1 cut(s)	596
BsoBI	CYCGRG	2 cut(s)	1274, 1472
Bsp120I	GGGCCC	1 cut(s)	1040
Bsp1286I	GDGCHC	7 cut(s)	510, 669, 1044, 1275, 1608, 1625, 1764
Bsp13I	TCCGGA	1 cut(s)	569
Bsp1720I	GCTNAGC	1 cut(s)	947
Bsp19I	CCATGG	1 cut(s)	300
BspCNI	CTCAG	2 cut(s)	380, 960
BspDI	ATCGAT	1 cut(s)	564
BspEI	TCCGGA	1 cut(s)	569
BspFNI	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
BspMI	ACCTGC	1 cut(s)	1090
BspPI	GGATC	5 cut(s)	83, 96, 580, 1021, 1081
BspQI	GCTCTTC	1 cut(s)	119
BspT107I	GGYRCC	4 cut(s)	406, 446, 488, 1759
BspTI	CTTAAG	1 cut(s)	1184
BspTNI	GGTCTC	1 cut(s)	596
BsrFI	RCCGGY	3 cut(s)	443, 591, 1391
BsrI	ACTGG	3 cut(s)	218, 754, 1691
BssAI	RCCGGY	3 cut(s)	443, 591, 1391
BssNI	GRCGYC	4 cut(s)	471, 489, 753, 1313
BssSI	CACGAG	1 cut(s)	503
BssT1I	CCWWGG	2 cut(s)	228, 300
Bst2BI	CACGAG	1 cut(s)	503
Bst2UI	CCWGG	2 cut(s)	1264, 1516
Bst4CI	ACNGT	5 cut(s)	164, 273, 859, 1652, 1741
Bst6I	CTCTTC	4 cut(s)	15, 67, 119, 1623
BstACI	GRCGYC	4 cut(s)	471, 489, 753, 1313
BstAFI	CTTAAG	1 cut(s)	1184
BstBAI	YACGTR	3 cut(s)	377, 713, 1081
BstC8I	GCNNGC	9 cut(s)	341, 580, 589, 665, 691, 766, 884, 1361, 1410
BstDEI	CTNAG	3 cut(s)	367, 721, 947
BstDSI	CCRYGG	4 cut(s)	300, 510, 670, 742
BstF5I	GGATG	1 cut(s)	1435
BstFNI	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
BstH2I	RGCGCY	2 cut(s)	346, 492
BstHHI	GCGC	5 cut(s)	345, 491, 946, 1007, 1637
BstMAI	GTCTC	3 cut(s)	337, 596, 1113
BstMCI	CGRYCG	2 cut(s)	309, 787
BstNI	CCWGG	2 cut(s)	1264, 1516
BstSCI	CCNGG	8 cut(s)	828, 842, 921, 1014, 1089, 1262, 1514, 1556
BstSFI	CTRYAG	1 cut(s)	284
BstSLI	GKGCMC	2 cut(s)	1044, 1764
BstUI	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
BstV1I	GCAGC	3 cut(s)	141, 283, 305
BstV2I	GAAGAC	1 cut(s)	813
BstX2I	RGATCY	2 cut(s)	88, 1026
BstXI	CCANNNNNNTGG	1 cut(s)	749
BstYI	RGATCY	2 cut(s)	88, 1026
BstZI	CGGCCG	1 cut(s)	784
Bsu15I	ATCGAT	1 cut(s)	564
Bsu36I	CCTNAGG	1 cut(s)	721
BsuTUI	ATCGAT	1 cut(s)	564
BtgI	CCRYGG	4 cut(s)	300, 510, 670, 742
BtgZI	GCGATG	1 cut(s)	670
BtrI	CACGTC	1 cut(s)	1021
BtsCI	GGATG	1 cut(s)	1435
BtsI	GCAGTG	1 cut(s)	427
BtsIMutI	CAGTG	4 cut(s)	160, 278, 427, 747
BveI	ACCTGC	1 cut(s)	1090
Cac8I	GCNNGC	9 cut(s)	341, 580, 589, 665, 691, 766, 884, 1361, 1410
CfoI	GCGC	5 cut(s)	345, 491, 946, 1007, 1637
Cfr10I	RCCGGY	3 cut(s)	443, 591, 1391
Cfr13I	GGNCC	8 cut(s)	111, 717, 847, 891, 1040, 1041, 1093, 1137
ClaI	ATCGAT	1 cut(s)	564
CseI	GACGC	4 cut(s)	460, 742, 1321, 1626
Csp6I	GTAC	2 cut(s)	820, 1594
CviQI	GTAC	2 cut(s)	820, 1594
DdeI	CTNAG	3 cut(s)	367, 721, 947
DinI	GGCGCC	1 cut(s)	490
DraI	TTTAAA	1 cut(s)	978
DrdI	GACNNNNNNGTC	2 cut(s)	377, 1100
DseDI	GACNNNNNNGTC	2 cut(s)	377, 1100
EaeI	YGGCCR	5 cut(s)	513, 576, 673, 784, 795
EagI	CGGCCG	1 cut(s)	784
Eam1104I	CTCTTC	4 cut(s)	15, 67, 119, 1623
EarI	CTCTTC	4 cut(s)	15, 67, 119, 1623
EciI	GGCGGA	1 cut(s)	413
Ecl136II	GAGCTC	1 cut(s)	667
EclXI	CGGCCG	1 cut(s)	784
Eco130I	CCWWGG	2 cut(s)	228, 300
Eco147I	AGGCCT	1 cut(s)	726
Eco24I	GRGCYC	5 cut(s)	510, 669, 1044, 1275, 1608
Eco31I	GGTCTC	1 cut(s)	596
Eco47I	GGWCC	5 cut(s)	111, 847, 891, 1093, 1137
Eco52I	CGGCCG	1 cut(s)	784
Eco53kI	GAGCTC	1 cut(s)	667
Eco57I	CTGAAG	2 cut(s)	976, 1685
Eco72I	CACGTG	2 cut(s)	377, 713
Eco81I	CCTNAGG	1 cut(s)	721
Eco88I	CYCGRG	2 cut(s)	1274, 1472
EcoICRI	GAGCTC	1 cut(s)	667
EcoO109I	RGGNCCY	4 cut(s)	717, 847, 1040, 1137
EcoRI	GAATTC	1 cut(s)	1179
EcoRII	CCWGG	2 cut(s)	1262, 1514
EcoT14I	CCWWGG	2 cut(s)	228, 300
EcoT22I	ATGCAT	2 cut(s)	51, 1056
EcoT38I	GRGCYC	5 cut(s)	510, 669, 1044, 1275, 1608
EgeI	GGCGCC	1 cut(s)	490
EheI	GGCGCC	1 cut(s)	490
ErhI	CCWWGG	2 cut(s)	228, 300
FalI	AAGNNNNNCTT	2 cut(s)	1533, 1565
FaqI	GGGAC	3 cut(s)	860, 1123, 1792
FauI	CCCGC	2 cut(s)	1401, 1441
FbaI	TGATCA	1 cut(s)	1125
FblI	GTMKAC	4 cut(s)	474, 774, 918, 1224
Fnu4HI	GCNGC	5 cut(s)	130, 294, 297, 787, 1316
FokI	GGATG	1 cut(s)	1442
FriOI	GRGCYC	5 cut(s)	510, 669, 1044, 1275, 1608
Fsp4HI	GCNGC	5 cut(s)	130, 294, 297, 787, 1316
FspBI	CTAG	1 cut(s)	150
GlaI	GCGC	5 cut(s)	344, 490, 945, 1006, 1636
GluI	GCNGC	5 cut(s)	130, 294, 297, 787, 1316
GsaI	CCCAGC	1 cut(s)	890
HaeII	RGCGCY	2 cut(s)	346, 492
HgaI	GACGC	4 cut(s)	460, 742, 1321, 1626
HhaI	GCGC	5 cut(s)	345, 491, 946, 1007, 1637
Hin1I	GRCGYC	4 cut(s)	471, 489, 753, 1313
Hin6I	GCGC	5 cut(s)	343, 489, 944, 1005, 1635
HinP1I	GCGC	5 cut(s)	343, 489, 944, 1005, 1635
HincII	GTYRAC	3 cut(s)	919, 1225, 1711
HindII	GTYRAC	3 cut(s)	919, 1225, 1711
HinfI	GANTC	9 cut(s)	566, 926, 1226, 1277, 1322, 1397, 1402, 1424, 1790
HpaI	GTTAAC	1 cut(s)	1711
HphI	GGTGA	4 cut(s)	1060, 1096, 1576, 1613
Hpy166II	GTNNAC	9 cut(s)	475, 550, 597, 775, 894, 919, 1225, 1672, 1711
Hpy188III	TCNNGA	7 cut(s)	121, 570, 1232, 1255, 1294, 1474, 1673
Hpy8I	GTNNAC	9 cut(s)	475, 550, 597, 775, 894, 919, 1225, 1672, 1711
Hpy99I	CGWCG	9 cut(s)	536, 542, 758, 1211, 1295, 1346, 1642, 1652, 1679
HpyAV	CCTTC	4 cut(s)	314, 907, 1761, 1789
HpyCH4III	ACNGT	5 cut(s)	164, 273, 859, 1652, 1741
HpyCH4IV	ACGT	7 cut(s)	376, 712, 1020, 1080, 1238, 1664, 1781
HpyCH4V	TGCA	6 cut(s)	49, 172, 245, 462, 1054, 1308
HpyF3I	CTNAG	3 cut(s)	367, 721, 947
HpySE526I	ACGT	7 cut(s)	376, 712, 1020, 1080, 1238, 1664, 1781
Hsp92I	GRCGYC	4 cut(s)	471, 489, 753, 1313
HspAI	GCGC	5 cut(s)	343, 489, 944, 1005, 1635
KasI	GGCGCC	1 cut(s)	488
KflI	GGGWCCC	1 cut(s)	1137
Kpn2I	TCCGGA	1 cut(s)	569
Ksp22I	TGATCA	1 cut(s)	1125
KspAI	GTTAAC	1 cut(s)	1711
LguI	GCTCTTC	1 cut(s)	119
LmnI	GCTCC	6 cut(s)	323, 406, 672, 1270, 1307, 1696
Lsp1109I	GCAGC	3 cut(s)	141, 283, 305
LweI	GCATC	4 cut(s)	58, 570, 693, 1041
MaeI	CTAG	1 cut(s)	150
MaeII	ACGT	7 cut(s)	376, 712, 1020, 1080, 1238, 1664, 1781
MaeIII	GTNAC	4 cut(s)	223, 832, 866, 1652
MfeI	CAATTG	1 cut(s)	1503
MflI	RGATCY	2 cut(s)	88, 1026
MhlI	GDGCHC	7 cut(s)	510, 669, 1044, 1275, 1608, 1625, 1764
MlsI	TGGCCA	1 cut(s)	797
MluCI	AATT	6 cut(s)	438, 1179, 1381, 1438, 1503, 1745
MluNI	TGGCCA	1 cut(s)	797
Mly113I	GGCGCC	1 cut(s)	489
MlyI	GAGTC	4 cut(s)	1220, 1286, 1316, 1406
MmeI	TCCRAC	4 cut(s)	783, 1620, 1674, 1710
Mox20I	TGGCCA	1 cut(s)	797
Mph1103I	ATGCAT	2 cut(s)	51, 1056
MroI	TCCGGA	1 cut(s)	569
MscI	TGGCCA	1 cut(s)	797
MseI	TTAA	5 cut(s)	465, 977, 1185, 1352, 1710
MslI	CAYNNNNRTG	1 cut(s)	1049
Msp20I	TGGCCA	1 cut(s)	797
MspA1I	CMGCKG	2 cut(s)	296, 886
MspCI	CTTAAG	1 cut(s)	1184
MspR9I	CCNGG	8 cut(s)	830, 844, 923, 1016, 1091, 1264, 1516, 1558
MunI	CAATTG	1 cut(s)	1503
Mva1269I	GAATGC	2 cut(s)	156, 1198
MvaI	CCWGG	2 cut(s)	1264, 1516
MvnI	CGCG	7 cut(s)	339, 944, 1007, 1171, 1486, 1637, 1715
NarI	GGCGCC	1 cut(s)	489
NciI	CCSGG	6 cut(s)	830, 844, 923, 1016, 1091, 1558
NcoI	CCATGG	1 cut(s)	300
NmeAIII	GCCGAG	1 cut(s)	1644
NmuCI	GTSAC	1 cut(s)	832
NsiI	ATGCAT	2 cut(s)	51, 1056
PceI	AGGCCT	1 cut(s)	726
PciSI	GCTCTTC	1 cut(s)	119
PcsI	WCGNNNNNNNCGW	7 cut(s)	315, 750, 768, 1230, 1341, 1506, 1674
PctI	GAATGC	2 cut(s)	156, 1198
PfeI	GAWTC	5 cut(s)	566, 926, 1402, 1424, 1790
PflFI	GACNNNGTC	1 cut(s)	314
PfoI	TCCNGGA	1 cut(s)	1089
PkrI	GCNGC	5 cut(s)	131, 295, 298, 788, 1317
Ple19I	CGATCG	1 cut(s)	309
PleI	GAGTC	4 cut(s)	1220, 1285, 1316, 1405
PluTI	GGCGCC	1 cut(s)	492
PmaCI	CACGTG	2 cut(s)	377, 713
PmlI	CACGTG	2 cut(s)	377, 713
PpsI	GAGTC	4 cut(s)	1220, 1285, 1316, 1405
Ppu21I	YACGTR	3 cut(s)	377, 713, 1081
PpuMI	RGGWCCY	2 cut(s)	847, 1137
Psp124BI	GAGCTC	1 cut(s)	669
Psp5II	RGGWCCY	2 cut(s)	847, 1137
Psp6I	CCWGG	2 cut(s)	1262, 1514
PspCI	CACGTG	2 cut(s)	377, 713
PspFI	CCCAGC	1 cut(s)	886
PspGI	CCWGG	2 cut(s)	1262, 1514
PspOMI	GGGCCC	1 cut(s)	1040
PspPI	GGNCC	8 cut(s)	111, 717, 847, 891, 1040, 1041, 1093, 1137
PspPPI	RGGWCCY	2 cut(s)	847, 1137
PsuI	RGATCY	2 cut(s)	88, 1026
PsyI	GACNNNGTC	1 cut(s)	314
PvuI	CGATCG	1 cut(s)	309
PvuII	CAGCTG	2 cut(s)	296, 886
RsaI	GTAC	2 cut(s)	821, 1595
RsaNI	GTAC	2 cut(s)	820, 1594
RseI	CAYNNNNRTG	1 cut(s)	1049
SacI	GAGCTC	1 cut(s)	669
SalI	GTCGAC	2 cut(s)	917, 1223
SapI	GCTCTTC	1 cut(s)	119
SaqAI	TTAA	5 cut(s)	465, 977, 1185, 1352, 1710
SatI	GCNGC	5 cut(s)	130, 294, 297, 787, 1316
Sau96I	GGNCC	8 cut(s)	111, 717, 847, 891, 1040, 1041, 1093, 1137
SchI	GAGTC	4 cut(s)	1220, 1286, 1316, 1406
ScrFI	CCNGG	8 cut(s)	830, 844, 923, 1016, 1091, 1264, 1516, 1558
SduI	GDGCHC	7 cut(s)	510, 669, 1044, 1275, 1608, 1625, 1764
SfaNI	GCATC	4 cut(s)	58, 570, 693, 1041
SfcI	CTRYAG	1 cut(s)	284
SfoI	GGCGCC	1 cut(s)	490
SinI	GGWCC	5 cut(s)	111, 847, 891, 1093, 1137
SmiMI	CAYNNNNRTG	1 cut(s)	1049
SmlI	CTYRAG	1 cut(s)	1184
SmoI	CTYRAG	1 cut(s)	1184
Sse9I	AATT	6 cut(s)	438, 1179, 1381, 1438, 1503, 1745
SseBI	AGGCCT	1 cut(s)	726
SspDI	GGCGCC	1 cut(s)	488
SspMI	CTAG	1 cut(s)	150
SstI	GAGCTC	1 cut(s)	669
StuI	AGGCCT	1 cut(s)	726
StyD4I	CCNGG	8 cut(s)	828, 842, 921, 1014, 1089, 1262, 1514, 1556
StyI	CCWWGG	2 cut(s)	228, 300
TaaI	ACNGT	5 cut(s)	164, 273, 859, 1652, 1741
TaiI	ACGT	7 cut(s)	379, 715, 1023, 1083, 1241, 1667, 1784
TasI	AATT	6 cut(s)	438, 1179, 1381, 1438, 1503, 1745
TauI	GCSGC	2 cut(s)	789, 1318
TfiI	GAWTC	5 cut(s)	566, 926, 1402, 1424, 1790
Tru1I	TTAA	5 cut(s)	465, 977, 1185, 1352, 1710
Tru9I	TTAA	5 cut(s)	465, 977, 1185, 1352, 1710
TscAI	CASTG	4 cut(s)	167, 278, 434, 754
TseFI	GTSAC	1 cut(s)	832
TseI	GCWGC	3 cut(s)	129, 293, 296
Tsp45I	GTSAC	1 cut(s)	832
TspDTI	ATGAA	2 cut(s)	1739, 1763
TspGWI	ACGGA	2 cut(s)	614, 1640
TspRI	CASTG	4 cut(s)	167, 278, 434, 754
Tth111I	GACNNNGTC	1 cut(s)	314
Vha464I	CTTAAG	1 cut(s)	1184
VpaK11BI	GGWCC	5 cut(s)	111, 847, 891, 1093, 1137
XapI	RAATTY	2 cut(s)	1179, 1438
XmiI	GTMKAC	4 cut(s)	474, 774, 918, 1224
XspI	CTAG	1 cut(s)	150
Zsp2I	ATGCAT	2 cut(s)	51, 1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.