Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0013872

Physical Location & Seq

Genomic Coordinates Forward (+)

4006780 .. 4009319

Gene Structure 2540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G082000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGCTGCTCTTGGAAAAGCACCCAACTCTAATAGTTGGGCTACCTCTACAGCCCAAATGCCTCACACTCTCCTCTCTTCCTCCTCTTCTTCTCTAGTGGATCCTATGGGCTTCCCAAAAAGGTCCATCTCCTTGAGAAAAACACACCCCAAAGCAGCAACTCGCAGAACCACCAGCATTCACTGTGCTTTACAATCTCCCTCGGTTCTTCACTTCCCAAACCAACCTTATAATCGACCAATTATTACCAAGGAAGCCACTTCTCCAAAACCCAACAACAGCACCCACCATCATCACCAACCTCCACAGTGGAATTTACTACAGAAAGCGGCAGCCATGGCCATAGACATGGTCGAAGGCGCCTTGGTCTCCCGCGAGCGCCAAAACCCACTTCCCAAAACCTCTGACCCACGAGTCCAAATCACCGGAAACTACGCTCCCGTGCCGGAGCAACCTGTCCGCCACTCCCTACCCATAACCGGCACCATCCCAGAATGCATTAACGGCGTCTACGTCCGTAACGGCGCCAACCCTTTATTTGAGCCTGTCGCCGGCCACCACTTGTTCGACGGTGACGGCATGGTGCACGCCGTCACCATAGACTCCGGGTCGGCCAGTTACGCCTGCCGGTTCACCGAAACCCAGAGACTCGTCCAAGAACGCGAGTTCGGGCGACCCGTTTTCCCCAAGGCCATCGGCGAGCTCCACGGACACTCCGGCATCGCCCGCCTCCTCTTATTTTACGCACGTGGGGTTTTAGGCCTCGTCGACAAAAACCACGGCACTGGCGTCGCGAACGCCGGTCTGGTCTATCACAACGACAGGCTGCTGGCCATGTCGGAGGACGACTTGCCGTACCAGGTGCGAGTCACGAAATCCGGCGACCTCGAAACGGTCGGTCGTTACGATTTCAACAGCCAGCTGGGGTCCACAATGATCGCCCACCCGAAGGTCGACCCGGAATCCGGCTCCCTCTTCGCCCTCAGCTACGACGTCGTTCAGAAACCGTATCTCAAGTACTTCCAAGTCTCTCCAGACGGCACAAAATCCCCAGACGTCGAAATCCCCCTAGCGGGGCCCACCATGATGCACGACTTTGCGATCACAGAAAATTACGTGGTAATCCCGGACCAGCAGGTGGTGTTCAAGCTGCAGGAGATGATCACGGGAGGCTCCCCCGTGATCTACGACAAGGACAAGATGTCGAGATTCGGAATTCTCAAGAAGAATGCCAAAAACGCTGACGACCTGGTGTGGGTGGACTCCCCCGACACGTTCTGCTTCCACCTGTGGAACGCGTGGGAGGAGCCCGAGTCAGACGAGGTTGTCGTGATCGGGTCCTGCATGACGCCGCCGGACTCCATCTTCAATGAATGCGACGAGAGCCTCAAGAGCGTGCTGTCCGAAATCAGGCTCAATTTGAAAACCGGCGAGTCGACACGGAGGGCGATTCTGTCGGAATCGGAGCATGTGAATTTGGAGGCGGGAATGGTGAACCGGAACCGGCTCGGGAGGAAAACCCGGTTCGCGTACCTCGCAATTGCGGAGCCGTGGCCGAAAGTGTCGGGCTTCGCGAAGGTGGATGTTTCTACCGGAGAGGTAAAAAAATTTATATACGGTGATAAAAAGTACGGCGGCGAGCCGTTTTTTGTCCCGAATGCGGAATTGGGTTCATCGGAGGACGACGGGTACATAATGACTTTTGTGCACGATGAAAAAACTTGGAAATCGGAGCTCCAGATTGTGAATGCGGTAAATTTGAAACTGGAAGCGACGGTGAAATTACCATCAAGGGTCCCGTACGGATTTCATGGGACGTTTATAGAATCAAAGGACTTGGCAAATCAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

618

Amino Acids

68.16

Weight (kDa)

6.43

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30100 AT4G18350
fragaria_vesca	FvH4_3g05440
malus_domestica	MD05G1282700.v1.1 MD10G1261000.v1.1
prunus_persica	Prupe.4G082000_v2.0.a1
pyrus_communis	pycom05g26210
rosa_chinensis	RchiOBHm_Chr5g0014331
rosa_laevigata	RLG00000032098
rosa_multiflora	Rmu_co8232887.1_g000001 Rmu_sc0009295.1_g000002
rosa_rugosa	Rorug05G0017400
rosa_samantha	Rh5AG111500 Rh5BG108800 Rh5CG120500 Rh5DG107500
rosa_wichuraiana	Rw5G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	231
AarI	CACCTGC	1 cut(s)	1126
AasI	GACNNNNNNGTC	2 cut(s)	413, 1325
AatII	GACGTC	2 cut(s)	996, 1059
Acc36I	ACCTGC	1 cut(s)	1126
AccB1I	GGYRCC	3 cut(s)	359, 482, 524
AccB7I	CCANNNNNTGG	1 cut(s)	1138
AccI	GTMKAC	4 cut(s)	510, 768, 954, 1436
AccII	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
AclWI	GGATC	2 cut(s)	95, 108
AcoI	YGGCCR	5 cut(s)	339, 553, 612, 831, 1553
AcsI	RAATTY	5 cut(s)	313, 1215, 1474, 1607, 1756
AcvI	CACGTG	1 cut(s)	749
AcyI	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
AfaI	GTAC	6 cut(s)	857, 1019, 1532, 1631, 1691, 1802
AflIII	ACRYGT	2 cut(s)	1272, 1296
AgsI	TTSAA	5 cut(s)	913, 1147, 1369, 1423, 1762
AhdI	GACNNNNNGTC	2 cut(s)	607, 1201
AjnI	CCWGG	2 cut(s)	858, 1248
AjuI	GAANNNNNNNTTGG	4 cut(s)	375, 407, 1649, 1681
AluBI	AGCT	5 cut(s)	703, 922, 987, 1150, 1735
AluI	AGCT	5 cut(s)	703, 922, 987, 1150, 1735
Alw21I	GWGCWC	4 cut(s)	588, 705, 1710, 1737
Alw26I	GTCTC	3 cut(s)	373, 640, 1033
Alw44I	GTGCAC	2 cut(s)	584, 1706
AlwI	GGATC	2 cut(s)	95, 108
Ama87I	CYCGRG	2 cut(s)	1310, 1508
AoxI	GGCC	8 cut(s)	339, 553, 612, 690, 760, 831, 1076, 1553
ApaI	GGGCCC	1 cut(s)	1080
ApaLI	GTGCAC	2 cut(s)	584, 1706
ApeKI	GCWGC	5 cut(s)	5, 155, 332, 826, 1150
ApoI	RAATTY	5 cut(s)	313, 1215, 1474, 1607, 1756
AspLEI	GCGC	3 cut(s)	362, 381, 527
AspS9I	GGNCC	7 cut(s)	123, 927, 1076, 1077, 1129, 1338, 1795
AsuC2I	CCSGG	4 cut(s)	607, 959, 1127, 1522
AsuHPI	GGTGA	8 cut(s)	287, 415, 584, 586, 625, 1504, 1631, 1789
AvaI	CYCGRG	2 cut(s)	1310, 1508
AvaII	GGWCC	5 cut(s)	123, 927, 1129, 1338, 1795
BaeGI	GKGCMC	3 cut(s)	588, 1080, 1710
BalI	TGGCCA	2 cut(s)	341, 833
BamHI	GGATCC	1 cut(s)	100
BanI	GGYRCC	3 cut(s)	359, 482, 524
BanII	GRGCYC	4 cut(s)	705, 1080, 1311, 1737
BauI	CACGAG	1 cut(s)	411
BbrPI	CACGTG	1 cut(s)	749
Bbv12I	GWGCWC	4 cut(s)	588, 705, 1710, 1737
BbvCI	CCTCAGC	1 cut(s)	983
BbvI	GCAGC	4 cut(s)	167, 344, 813, 1137
BccI	CCATC	6 cut(s)	134, 297, 494, 701, 1370, 1795
BcgI	CGANNNNNNTGC	2 cut(s)	772, 806
BciT130I	CCWGG	2 cut(s)	860, 1250
BclI	TGATCA	1 cut(s)	1161
BcnI	CCSGG	4 cut(s)	607, 959, 1127, 1522
BcoDI	GTCTC	3 cut(s)	373, 640, 1033
BfaI	CTAG	2 cut(s)	95, 1070
BfmI	CTRYAG	3 cut(s)	48, 320, 1151
BfoI	RGCGCY	3 cut(s)	363, 382, 528
BfuAI	ACCTGC	1 cut(s)	1126
BisI	GCNGC	8 cut(s)	6, 156, 330, 333, 827, 1151, 1352, 1636
BlsI	GCNGC	8 cut(s)	7, 157, 331, 334, 828, 1152, 1353, 1637
BmcAI	AGTACT	1 cut(s)	1019
Bme1390I	CCNGG	6 cut(s)	607, 860, 959, 1127, 1250, 1522
Bme18I	GGWCC	5 cut(s)	123, 927, 1129, 1338, 1795
BmeRI	GACNNNNNGTC	2 cut(s)	607, 1201
BmeT110I	CYCGRG	2 cut(s)	1310, 1508
BmgT120I	GGNCC	7 cut(s)	123, 927, 1076, 1077, 1129, 1338, 1795
BmrFI	CCNGG	6 cut(s)	607, 860, 959, 1127, 1250, 1522
BmsI	GCATC	2 cut(s)	729, 1077
BpmI	CTGGAG	2 cut(s)	1017, 1721
Bpu10I	CCTNAGC	1 cut(s)	983
BpuEI	CTTGAG	4 cut(s)	154, 998, 1205, 1373
BpuMI	CCSGG	4 cut(s)	607, 959, 1127, 1522
BsaAI	YACGTR	2 cut(s)	749, 1117
BsaHI	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
BsaI	GGTCTC	1 cut(s)	373
BsaJI	CCNNGG	8 cut(s)	201, 249, 336, 363, 687, 706, 778, 1550
BsaWI	WCCGGW	3 cut(s)	425, 1497, 1592
BsaXI	ACNNNNNCTCC	4 cut(s)	698, 728, 1298, 1328
Bse118I	RCCGGY	6 cut(s)	479, 551, 627, 800, 1427, 1503
Bse1I	ACTGG	3 cut(s)	615, 790, 1770
BseBI	CCWGG	2 cut(s)	860, 1250
BseDI	CCNNGG	8 cut(s)	201, 249, 336, 363, 687, 706, 778, 1550
BseGI	GGATG	2 cut(s)	486, 1588
BseMII	CTCAG	1 cut(s)	997
BseNI	ACTGG	3 cut(s)	615, 790, 1770
BseRI	GAGGAG	4 cut(s)	62, 73, 722, 1319
BseSI	GKGCMC	3 cut(s)	588, 1080, 1710
BseXI	GCAGC	4 cut(s)	167, 344, 813, 1137
BseYI	CCCAGC	1 cut(s)	922
Bsh1236I	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
Bsh1285I	CGRYCG	2 cut(s)	897, 901
BshFI	GGCC	8 cut(s)	341, 555, 614, 692, 762, 833, 1078, 1555
BshNI	GGYRCC	3 cut(s)	359, 482, 524
BsiEI	CGRYCG	2 cut(s)	897, 901
BsiHKAI	GWGCWC	4 cut(s)	588, 705, 1710, 1737
BsiHKCI	CYCGRG	2 cut(s)	1310, 1508
BsiWI	CGTACG	1 cut(s)	1800
BslFI	GGGAC	3 cut(s)	1637, 1781, 1828
BsmAI	GTCTC	3 cut(s)	373, 640, 1033
BsmFI	GGGAC	3 cut(s)	1637, 1781, 1828
BsmI	GAATGC	6 cut(s)	177, 500, 1234, 1379, 1663, 1753
BsnI	GGCC	8 cut(s)	341, 555, 614, 692, 762, 833, 1078, 1555
Bso31I	GGTCTC	1 cut(s)	373
BsoBI	CYCGRG	2 cut(s)	1310, 1508
Bsp120I	GGGCCC	1 cut(s)	1076
Bsp1286I	GDGCHC	6 cut(s)	588, 705, 1080, 1311, 1710, 1737
Bsp143I	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
Bsp19I	CCATGG	1 cut(s)	336
Bsp68I	TCGCGA	2 cut(s)	794, 1574
BspANI	GGCC	8 cut(s)	341, 555, 614, 692, 762, 833, 1078, 1555
BspCNI	CTCAG	1 cut(s)	996
BspFNI	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
BspMAI	CTGCAG	1 cut(s)	1155
BspMI	ACCTGC	1 cut(s)	1126
BspPI	GGATC	2 cut(s)	95, 108
BspT107I	GGYRCC	3 cut(s)	359, 482, 524
BspTNI	GGTCTC	1 cut(s)	373
BsrFI	RCCGGY	6 cut(s)	479, 551, 627, 800, 1427, 1503
BsrI	ACTGG	3 cut(s)	615, 790, 1770
BssAI	RCCGGY	6 cut(s)	479, 551, 627, 800, 1427, 1503
BssECI	CCNNGG	8 cut(s)	201, 249, 336, 363, 687, 706, 778, 1550
BssMI	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
BssNI	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
BssSI	CACGAG	1 cut(s)	411
BssT1I	CCWWGG	4 cut(s)	249, 336, 363, 687
Bst2BI	CACGAG	1 cut(s)	411
Bst2UI	CCWGG	2 cut(s)	860, 1250
Bst4CI	ACNGT	7 cut(s)	185, 309, 572, 895, 1008, 1619, 1777
Bst6I	CTCTTC	3 cut(s)	82, 91, 980
BstACI	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
BstBAI	YACGTR	2 cut(s)	749, 1117
BstDEI	CTNAG	1 cut(s)	983
BstDSI	CCRYGG	4 cut(s)	336, 706, 778, 1550
BstF5I	GGATG	2 cut(s)	486, 1588
BstFNI	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
BstH2I	RGCGCY	3 cut(s)	363, 382, 528
BstHHI	GCGC	3 cut(s)	362, 381, 527
BstKTI	GATC	6 cut(s)	103, 939, 1104, 1164, 1185, 1335
BstMAI	GTCTC	3 cut(s)	373, 640, 1033
BstMBI	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
BstMCI	CGRYCG	2 cut(s)	897, 901
BstMWI	GCNNNNNNNGC	9 cut(s)	338, 504, 620, 726, 1238, 1383, 1392, 1535, 1847
BstNI	CCWGG	2 cut(s)	860, 1250
BstNSI	RCATGY	1 cut(s)	1472
BstSCI	CCNGG	6 cut(s)	605, 858, 957, 1125, 1248, 1520
BstSFI	CTRYAG	3 cut(s)	48, 320, 1151
BstSLI	GKGCMC	3 cut(s)	588, 1080, 1710
BstUI	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
BstV1I	GCAGC	4 cut(s)	167, 344, 813, 1137
BstX2I	RGATCY	1 cut(s)	100
BstXI	CCANNNNNNTGG	2 cut(s)	349, 785
BstYI	RGATCY	1 cut(s)	100
BsuRI	GGCC	8 cut(s)	341, 555, 614, 692, 762, 833, 1078, 1555
BtgI	CCRYGG	4 cut(s)	336, 706, 778, 1550
BtgZI	GCGATG	1 cut(s)	706
BtsCI	GGATG	2 cut(s)	486, 1588
BtsIMutI	CAGTG	3 cut(s)	181, 314, 783
BtuMI	TCGCGA	2 cut(s)	794, 1574
BveI	ACCTGC	1 cut(s)	1126
CfoI	GCGC	3 cut(s)	362, 381, 527
Cfr10I	RCCGGY	6 cut(s)	479, 551, 627, 800, 1427, 1503
Cfr13I	GGNCC	7 cut(s)	123, 927, 1076, 1077, 1129, 1338, 1795
CseI	GACGC	3 cut(s)	496, 778, 1357
CsiI	ACCWGGT	2 cut(s)	858, 1248
Csp6I	GTAC	6 cut(s)	856, 1018, 1531, 1630, 1690, 1801
CviAII	CATG	8 cut(s)	337, 349, 580, 835, 1084, 1345, 1469, 1811
CviQI	GTAC	6 cut(s)	856, 1018, 1531, 1630, 1690, 1801
DdeI	CTNAG	1 cut(s)	983
DinI	GGCGCC	2 cut(s)	361, 526
DpnI	GATC	6 cut(s)	102, 938, 1103, 1163, 1184, 1334
DpnII	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
DrdI	GACNNNNNNGTC	2 cut(s)	413, 1325
DriI	GACNNNNNGTC	2 cut(s)	607, 1201
DseDI	GACNNNNNNGTC	2 cut(s)	413, 1325
EaeI	YGGCCR	5 cut(s)	339, 553, 612, 831, 1553
Eam1104I	CTCTTC	3 cut(s)	82, 91, 980
Eam1105I	GACNNNNNGTC	2 cut(s)	607, 1201
EarI	CTCTTC	3 cut(s)	82, 91, 980
EciI	GGCGGA	1 cut(s)	449
Ecl136II	GAGCTC	2 cut(s)	703, 1735
Eco130I	CCWWGG	4 cut(s)	249, 336, 363, 687
Eco147I	AGGCCT	1 cut(s)	762
Eco24I	GRGCYC	4 cut(s)	705, 1080, 1311, 1737
Eco31I	GGTCTC	1 cut(s)	373
Eco47I	GGWCC	5 cut(s)	123, 927, 1129, 1338, 1795
Eco53kI	GAGCTC	2 cut(s)	703, 1735
Eco72I	CACGTG	1 cut(s)	749
Eco88I	CYCGRG	2 cut(s)	1310, 1508
EcoICRI	GAGCTC	2 cut(s)	703, 1735
EcoO109I	RGGNCCY	3 cut(s)	1076, 1338, 1795
EcoRI	GAATTC	1 cut(s)	1215
EcoRII	CCWGG	2 cut(s)	858, 1248
EcoT14I	CCWWGG	4 cut(s)	249, 336, 363, 687
EcoT22I	ATGCAT	1 cut(s)	500
EcoT38I	GRGCYC	4 cut(s)	705, 1080, 1311, 1737
EgeI	GGCGCC	2 cut(s)	361, 526
EheI	GGCGCC	2 cut(s)	361, 526
ErhI	CCWWGG	4 cut(s)	249, 336, 363, 687
FaeI	CATG	8 cut(s)	340, 352, 583, 838, 1087, 1348, 1472, 1814
FaqI	GGGAC	3 cut(s)	1637, 1781, 1828
FatI	CATG	8 cut(s)	336, 348, 579, 834, 1083, 1344, 1468, 1810
FauI	CCCGC	4 cut(s)	380, 734, 1066, 1477
FbaI	TGATCA	1 cut(s)	1161
FblI	GTMKAC	4 cut(s)	510, 768, 954, 1436
Fnu4HI	GCNGC	8 cut(s)	6, 156, 330, 333, 827, 1151, 1352, 1636
FokI	GGATG	2 cut(s)	473, 1595
FriOI	GRGCYC	4 cut(s)	705, 1080, 1311, 1737
Fsp4HI	GCNGC	8 cut(s)	6, 156, 330, 333, 827, 1151, 1352, 1636
FspBI	CTAG	2 cut(s)	95, 1070
GlaI	GCGC	3 cut(s)	361, 380, 526
GluI	GCNGC	8 cut(s)	6, 156, 330, 333, 827, 1151, 1352, 1636
GsaI	CCCAGC	1 cut(s)	926
GsuI	CTGGAG	2 cut(s)	1017, 1721
HaeII	RGCGCY	3 cut(s)	363, 382, 528
HaeIII	GGCC	8 cut(s)	341, 555, 614, 692, 762, 833, 1078, 1555
HgaI	GACGC	3 cut(s)	496, 778, 1357
HhaI	GCGC	3 cut(s)	362, 381, 527
Hin1I	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
Hin1II	CATG	8 cut(s)	340, 352, 583, 838, 1087, 1348, 1472, 1814
Hin6I	GCGC	3 cut(s)	360, 379, 525
HinP1I	GCGC	3 cut(s)	360, 379, 525
HincII	GTYRAC	3 cut(s)	769, 955, 1437
HindII	GTYRAC	3 cut(s)	769, 955, 1437
HphI	GGTGA	8 cut(s)	287, 415, 584, 586, 625, 1504, 1631, 1789
Hpy99I	CGWCG	9 cut(s)	572, 770, 794, 995, 998, 1061, 1382, 1688, 1777
HpyAV	CCTTC	3 cut(s)	350, 943, 1570
HpyCH4III	ACNGT	7 cut(s)	185, 309, 572, 895, 1008, 1619, 1777
HpyCH4IV	ACGT	7 cut(s)	513, 748, 993, 1056, 1116, 1274, 1817
HpyCH4V	TGCA	6 cut(s)	498, 586, 1090, 1153, 1344, 1708
HpyF10VI	GCNNNNNNNGC	9 cut(s)	338, 504, 620, 726, 1238, 1383, 1392, 1535, 1847
HpyF3I	CTNAG	1 cut(s)	983
HpySE526I	ACGT	7 cut(s)	513, 748, 993, 1056, 1116, 1274, 1817
Hsp92I	GRCGYC	7 cut(s)	360, 507, 525, 789, 993, 1056, 1349
Hsp92II	CATG	8 cut(s)	340, 352, 583, 838, 1087, 1348, 1472, 1814
HspAI	GCGC	3 cut(s)	360, 379, 525
KasI	GGCGCC	2 cut(s)	359, 524
KflI	GGGWCCC	1 cut(s)	1795
KroI	GCCGGC	1 cut(s)	551
KroNI	GCCGGC	1 cut(s)	553
Ksp22I	TGATCA	1 cut(s)	1161
Kzo9I	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
Lsp1109I	GCAGC	4 cut(s)	167, 344, 813, 1137
LweI	GCATC	2 cut(s)	729, 1077
MabI	ACCWGGT	2 cut(s)	858, 1248
MaeI	CTAG	2 cut(s)	95, 1070
MaeII	ACGT	7 cut(s)	513, 748, 993, 1056, 1116, 1274, 1817
MaeIII	GTNAC	6 cut(s)	518, 572, 592, 617, 868, 902
MalI	GATC	6 cut(s)	102, 938, 1103, 1163, 1184, 1334
MboI	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
MboII	GAAGA	7 cut(s)	69, 78, 81, 200, 967, 1237, 1357
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	1 cut(s)	100
MhlI	GDGCHC	6 cut(s)	588, 705, 1080, 1311, 1710, 1737
MlsI	TGGCCA	2 cut(s)	341, 833
MluI	ACGCGT	1 cut(s)	1296
MluNI	TGGCCA	2 cut(s)	341, 833
Mly113I	GGCGCC	2 cut(s)	360, 525
MlyI	GAGTC	8 cut(s)	423, 596, 642, 876, 1256, 1322, 1352, 1442
MmeI	TCCRAC	2 cut(s)	819, 1437
Mox20I	TGGCCA	2 cut(s)	341, 833
Mph1103I	ATGCAT	1 cut(s)	500
MroNI	GCCGGC	1 cut(s)	551
MscI	TGGCCA	2 cut(s)	341, 833
MseI	TTAA	1 cut(s)	501
MslI	CAYNNNNRTG	2 cut(s)	347, 1085
Msp20I	TGGCCA	2 cut(s)	341, 833
MspA1I	CMGCKG	1 cut(s)	922
MspR9I	CCNGG	6 cut(s)	607, 860, 959, 1127, 1250, 1522
MunI	CAATTG	1 cut(s)	1539
Mva1269I	GAATGC	6 cut(s)	177, 500, 1234, 1379, 1663, 1753
MvaI	CCWGG	2 cut(s)	860, 1250
MvnI	CGCG	6 cut(s)	375, 663, 794, 1298, 1529, 1574
MwoI	GCNNNNNNNGC	9 cut(s)	338, 504, 620, 726, 1238, 1383, 1392, 1535, 1847
NaeI	GCCGGC	1 cut(s)	553
NarI	GGCGCC	2 cut(s)	360, 525
NciI	CCSGG	4 cut(s)	607, 959, 1127, 1522
NcoI	CCATGG	1 cut(s)	336
NdeII	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
NgoMIV	GCCGGC	1 cut(s)	551
NlaIII	CATG	8 cut(s)	340, 352, 583, 838, 1087, 1348, 1472, 1814
NmuCI	GTSAC	3 cut(s)	572, 592, 868
NruI	TCGCGA	2 cut(s)	794, 1574
NsiI	ATGCAT	1 cut(s)	500
NspI	RCATGY	1 cut(s)	1472
PaqCI	CACCTGC	1 cut(s)	1126
PceI	AGGCCT	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	6 cut(s)	510, 675, 786, 903, 1326, 1571
PctI	GAATGC	6 cut(s)	177, 500, 1234, 1379, 1663, 1753
PdiI	GCCGGC	1 cut(s)	553
PfeI	GAWTC	5 cut(s)	962, 1209, 1450, 1460, 1826
Pfl23II	CGTACG	1 cut(s)	1800
PflFI	GACNNNGTC	1 cut(s)	350
PflMI	CCANNNNNTGG	1 cut(s)	1138
PfoI	TCCNGGA	1 cut(s)	1125
PkrI	GCNGC	8 cut(s)	7, 157, 331, 334, 828, 1152, 1353, 1637
PleI	GAGTC	8 cut(s)	422, 596, 642, 875, 1256, 1321, 1352, 1441
PluTI	GGCGCC	2 cut(s)	363, 528
PmaCI	CACGTG	1 cut(s)	749
PmlI	CACGTG	1 cut(s)	749
PpsI	GAGTC	8 cut(s)	422, 596, 642, 875, 1256, 1321, 1352, 1441
Ppu21I	YACGTR	2 cut(s)	749, 1117
PpuMI	RGGWCCY	2 cut(s)	1338, 1795
PsiI	TTATAA	1 cut(s)	231
Psp124BI	GAGCTC	2 cut(s)	705, 1737
Psp5II	RGGWCCY	2 cut(s)	1338, 1795
Psp6I	CCWGG	2 cut(s)	858, 1248
PspCI	CACGTG	1 cut(s)	749
PspFI	CCCAGC	1 cut(s)	922
PspGI	CCWGG	2 cut(s)	858, 1248
PspLI	CGTACG	1 cut(s)	1800
PspOMI	GGGCCC	1 cut(s)	1076
PspPI	GGNCC	7 cut(s)	123, 927, 1076, 1077, 1129, 1338, 1795
PspPPI	RGGWCCY	2 cut(s)	1338, 1795
PstI	CTGCAG	1 cut(s)	1155
PsuI	RGATCY	1 cut(s)	100
PsyI	GACNNNGTC	1 cut(s)	350
PvuII	CAGCTG	1 cut(s)	922
RruI	TCGCGA	2 cut(s)	794, 1574
RsaI	GTAC	6 cut(s)	857, 1019, 1532, 1631, 1691, 1802
RsaNI	GTAC	6 cut(s)	856, 1018, 1531, 1630, 1690, 1801
RseI	CAYNNNNRTG	2 cut(s)	347, 1085
SacI	GAGCTC	2 cut(s)	705, 1737
SalI	GTCGAC	3 cut(s)	767, 953, 1435
SaqAI	TTAA	1 cut(s)	501
SatI	GCNGC	8 cut(s)	6, 156, 330, 333, 827, 1151, 1352, 1636
Sau3AI	GATC	6 cut(s)	100, 936, 1101, 1161, 1182, 1332
Sau96I	GGNCC	7 cut(s)	123, 927, 1076, 1077, 1129, 1338, 1795
ScaI	AGTACT	1 cut(s)	1019
SchI	GAGTC	8 cut(s)	423, 596, 642, 876, 1256, 1322, 1352, 1442
ScrFI	CCNGG	6 cut(s)	607, 860, 959, 1127, 1250, 1522
SduI	GDGCHC	6 cut(s)	588, 705, 1080, 1311, 1710, 1737
SexAI	ACCWGGT	2 cut(s)	858, 1248
SfaNI	GCATC	2 cut(s)	729, 1077
SfcI	CTRYAG	3 cut(s)	48, 320, 1151
SfoI	GGCGCC	2 cut(s)	361, 526
SinI	GGWCC	5 cut(s)	123, 927, 1129, 1338, 1795
SmiMI	CAYNNNNRTG	2 cut(s)	347, 1085
SmlI	CTYRAG	4 cut(s)	133, 1013, 1220, 1388
SmoI	CTYRAG	4 cut(s)	133, 1013, 1220, 1388
SseBI	AGGCCT	1 cut(s)	762
SspDI	GGCGCC	2 cut(s)	359, 524
SspMI	CTAG	2 cut(s)	95, 1070
SstI	GAGCTC	2 cut(s)	705, 1737
StuI	AGGCCT	1 cut(s)	762
StyD4I	CCNGG	6 cut(s)	605, 858, 957, 1125, 1248, 1520
StyI	CCWWGG	4 cut(s)	249, 336, 363, 687
TaaI	ACNGT	7 cut(s)	185, 309, 572, 895, 1008, 1619, 1777
TaiI	ACGT	7 cut(s)	516, 751, 996, 1059, 1119, 1277, 1820
TaqI	TCGA	9 cut(s)	235, 354, 567, 768, 888, 954, 1059, 1205, 1436
TaqII	GACCGA	1 cut(s)	887
TatI	WGTACW	1 cut(s)	1017
TauI	GCSGC	3 cut(s)	332, 1354, 1638
TfiI	GAWTC	5 cut(s)	962, 1209, 1450, 1460, 1826
Tru1I	TTAA	1 cut(s)	501
Tru9I	TTAA	1 cut(s)	501
TscAI	CASTG	3 cut(s)	188, 314, 790
TseFI	GTSAC	3 cut(s)	572, 592, 868
TseI	GCWGC	5 cut(s)	5, 155, 332, 826, 1150
Tsp45I	GTSAC	3 cut(s)	572, 592, 868
TspDTI	ATGAA	4 cut(s)	1386, 1662, 1728, 1799
TspGWI	ACGGA	4 cut(s)	506, 723, 1456, 1818
TspRI	CASTG	3 cut(s)	188, 314, 790
Tth111I	GACNNNGTC	1 cut(s)	350
Van91I	CCANNNNNTGG	1 cut(s)	1138
VneI	GTGCAC	2 cut(s)	584, 1706
VpaK11BI	GGWCC	5 cut(s)	123, 927, 1129, 1338, 1795
XapI	RAATTY	5 cut(s)	313, 1215, 1474, 1607, 1756
XceI	RCATGY	1 cut(s)	1472
XmiI	GTMKAC	4 cut(s)	510, 768, 954, 1436
XspI	CTAG	2 cut(s)	95, 1070
ZraI	GACGTC	2 cut(s)	994, 1057
ZrmI	AGTACT	1 cut(s)	1019
Zsp2I	ATGCAT	1 cut(s)	500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.