Prupe.4G084300_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0016778
Physical Location & Seq
Reverse (-)
4120440 .. 4122530
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G084300.1

Sequence Viewer

Length: 2091 bp
ATGCTTCCCTCCCAACGGTCAAGACATGTTCTCCACAACCCCTTCCTTCTCAAATTTCTACACTTTCCCGCGACCCAAACAAGACCATTGAACACACTCTCTTTCCTCTTGAACCTCTGCAACGATCCCAAAAAACTCCAGCAAATCCACGCCAGGTTCGTCCTTTATGGTCTGCACCAAAACCCAACACTCTCATCCAAACTCATCGACTGCTATGCCAACCTTGGCGCCCTCAGTCTTTCCCAACAAGTCTTCAACTCTATCAGTGACCGAAGTTCCCTTCTGTATAATACAATCTTAAGAAAGTTGTCAGAGTTTGGTGAATTTGAGAGAACCCTTTTGGTTTACAATGAAATGGTCATGAAATATATGTACCCAGAGGGAAATACTTACCCTTTTGTTTTGAAGTCATGTTCTTGCTGTTCAGATGCTAGAAATGGGGCAAAGATTCACGGGCATGTGGTGAAATTGGGTTTTGATTCATATGATCTGGTGGGTGCTGCTTTGGTTGATATGTATAGAAGCTATGGTAATTTTGAAAATGAGGGAAAGCAATGGAATTCTCTGACTTCTGAGGGTTCACAAAGCGGAAAAGCAATGGAGAAATTTGAACCTGATTCAGTTACTGTGATTAACTTGCTGAGGTCAAGCGTGGATTTGAACTCATTGCAGGTGGGAAAGGCTGTTCATTGTTTGGTTGTTGTGAGCAATTTGTGTGTGGATTTGTCTGTGAATACTGCATTGTTGTCTATGTATGCCAAGTTAGGTGATTTAGAATATGCCAAATTGGTATTTGAAGAAATGCCTGAGAAGGACTCTGTTGTTTGGAATATAATGATATCAGCTTATTCTCGAATTGGGTACCCTAAGGAATCACTGGAGCTACTGAGATGCATGGGAAGTTCAGGCATTAGAGCTGATTTATTTACTGCAATCCCTGCAATTTCTTCAATTACACAGTTAAGAGCTACTGATTGGGGCAAACAAATGCATGCTCATGTGATAAGAAATGGTTCAGATTATCAAGTGTCCGTTCATAATTCTCTGATTGATATGTACTGTGGATGTGATCGTCTAAATTCGGCTCGAAAGGTTTTTGATGTTGTGACAAACAAGACTGTTGTTTCATGGAGTGCAATGATTAAAGGATATGTCAATCATGATCAGTCACTTGACGCTCTTTCTCTCTTCTCCAAGATGAAATCTGAGGGAATCAGTGTCGATTTCATTACAGTTATTAACATCTTGCCTGCTTGTGTGAATCTAGGGGCACTAGAGAATGTAAAATACCTTCATGGGTACTCGGTGAAACTTAGCCTCAACTCACTTTCGTCTGTTAATACGGCATTTCTAGTCAGCTATGCAAAATGTGGATGCATAGAGATGGCCTGGAAGCTTTTTGATGAAGAGAATATCAATGATAAAGATCTAGTCACATGGAACTCTATGATTGGTGCGTATGCTAAGCATGGAGACTGGTATCGATCTTTTGAGTTGTATAACCAAATGAAGGAACTGAGATTGAAACCAGATCAAGTAACCTTTCTTGGAGTACTGACAGCCTGCGTAAACGCAGGTCTTGTTCAAGAAGGGAAGGAGTGTTTCAAGGAGATGGTTGAAACATATAATTGTCGACCGAGCCAGGAGCACTATGCTTGCATGGTGGATCTACTAGGGCGTGCTGGGCATGTCAATGAAGCCAGAGAACTTGTAAAATCTATGCCTTTCAAACCTGATGCTCGGGTTTGGGGCCCTTTGTTAAGTGCTTGTAAGTTGCATTCAGAGCCTGGGGTTGCAGAGTTTGCTGCTGAGAAGCTTATAACCATGGAACCGAAAAATGCTGGAAATTACATATTGCTTGCCAACATATATGCTGCAGCTGGAAAGTGGGATGGAGTTGCTAAGATGAGGAGTTTCCTCAGGGATAGAGGACTAAAGAAAACTCCCGGTTGTAGCTGGGTAGAGATAAATGGATGTCCACATGAGTTCCGAGTAGCGGATCGATCTCATCCAAGATCAGATGGTATATATGCCATATTAAGAAACCTGGAGTGGGAAATCAAGGATGCAAGAGACAGAGATGGAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

697

Amino Acids

78.1

Weight (kDa)

7.76

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016778)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g05170
malus_domestica MD10G1259000.v1.1
prunus_persica Prupe.4G084300_v2.0.a1
pyrus_communis pycom10g21550
rosa_chinensis RchiOBHm_Chr5g0014581
rosa_laevigata RLG00000032130
rosa_multiflora Rmu_co8518221.1_g000001 Rmu_sc0000120.1_g000005
rosa_roxburghii Rroxscaffold_1G00061900
rosa_rugosa Rorug05G0019600
rosa_samantha Rh5AG114800 Rh5BG111700 Rh5CG123200
rosa_wichuraiana Rw5G009940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1820
AarI CACCTGC 1 cut(s) 661
Acc36I ACCTGC 2 cut(s) 661, 1565
Acc65I GGTACC 1 cut(s) 861
AccB1I GGYRCC 2 cut(s) 227, 861
AccI GTMKAC 1 cut(s) 1633
AccII CGCG 1 cut(s) 71
AciI CCGC 3 cut(s) 69, 588, 1997
AclWI GGATC 3 cut(s) 119, 1674, 2007
AcsI RAATTY 5 cut(s) 53, 323, 559, 605, 1078
AcyI GRCGYC 1 cut(s) 228
AfaI GTAC 5 cut(s) 374, 863, 1058, 1301, 1554
AfiI CCNNNNNNNGG 4 cut(s) 15, 1510, 1996, 2053
AflII CTTAAG 1 cut(s) 298
AflIII ACRYGT 1 cut(s) 25
AjnI CCWGG 5 cut(s) 152, 1388, 1641, 1786, 2046
AloI GAACNNNNNNTCC 2 cut(s) 669, 701
Alw21I GWGCWC 1 cut(s) 1650
Alw26I GTCTC 2 cut(s) 1467, 2067
AlwI GGATC 3 cut(s) 119, 1674, 2007
AlwNI CAGNNNCTG 2 cut(s) 626, 1787
Ama87I CYCGRG 1 cut(s) 1740
AoxI GGCC 2 cut(s) 1386, 1750
ApaI GGGCCC 1 cut(s) 1754
ApeKI GCWGC 4 cut(s) 500, 1805, 1874, 1877
ApoI RAATTY 5 cut(s) 53, 323, 559, 605, 1078
Asp700I GAANNNNTTC 1 cut(s) 1012
Asp718I GGTACC 1 cut(s) 861
AspLEI GCGC 1 cut(s) 230
AspS9I GGNCC 2 cut(s) 1750, 1751
AsuC2I CCSGG 1 cut(s) 1947
AsuHPI GGTGA 4 cut(s) 332, 475, 779, 1318
AvaI CYCGRG 1 cut(s) 1740
AxyI CCTNAGG 2 cut(s) 867, 1919
BaeGI GKGCMC 2 cut(s) 1273, 1754
BanI GGYRCC 2 cut(s) 227, 861
BanII GRGCYC 1 cut(s) 1754
BarI GAAGNNNNNNTAC 2 cut(s) 1275, 1307
BbsI GAAGAC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 1650
BbvCI CCTCAGC 1 cut(s) 641
BbvI GCAGC 4 cut(s) 487, 1792, 1861, 1889
BccI CCATC 5 cut(s) 1378, 1606, 1886, 2015, 2075
BceAI ACGGC 1 cut(s) 1359
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 5 cut(s) 154, 1390, 1643, 1788, 2048
BclI TGATCA 1 cut(s) 1162
BcnI CCSGG 1 cut(s) 1947
BcoDI GTCTC 2 cut(s) 1467, 2067
BfaI CTAG 6 cut(s) 432, 1265, 1274, 1352, 1430, 1673
BfmI CTRYAG 1 cut(s) 1875
BfoI RGCGCY 1 cut(s) 231
BfrI CTTAAG 1 cut(s) 298
BfuAI ACCTGC 2 cut(s) 661, 1565
BglII AGATCT 1 cut(s) 1426
BisI GCNGC 4 cut(s) 501, 1806, 1875, 1878
BlpI GCTNAGC 1 cut(s) 1464
BlsI GCNGC 4 cut(s) 502, 1807, 1876, 1879
BmcAI AGTACT 1 cut(s) 1554
Bme1390I CCNGG 6 cut(s) 154, 1390, 1643, 1788, 1947, 2048
BmeT110I CYCGRG 1 cut(s) 1740
BmgT120I GGNCC 2 cut(s) 1750, 1751
BmiI GGNNCC 5 cut(s) 229, 863, 1751, 1752, 1830
BmrFI CCNGG 6 cut(s) 154, 1390, 1643, 1788, 1947, 2048
BmsI GCATC 5 cut(s) 418, 881, 1364, 1726, 2056
BpiI GAAGAC 1 cut(s) 244
BplI GAGNNNNNCTC 2 cut(s) 800, 832
BpmI CTGGAG 3 cut(s) 122, 899, 2069
Bpu10I CCTNAGC 1 cut(s) 641
Bpu1102I GCTNAGC 1 cut(s) 1464
BpuMI CCSGG 1 cut(s) 1947
Bsa29I ATCGAT 2 cut(s) 1483, 2002
BsaBI GATNNNNATC 1 cut(s) 1425
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 3 cut(s) 223, 1787, 1824
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 1510, 1996, 2053
Bse1I ACTGG 2 cut(s) 882, 1481
Bse21I CCTNAGG 2 cut(s) 867, 1919
Bse3DI GCAATG 4 cut(s) 560, 603, 665, 1143
Bse8I GATNNNNATC 1 cut(s) 1425
BseBI CCWGG 5 cut(s) 154, 1390, 1643, 1788, 2048
BseCI ATCGAT 2 cut(s) 1483, 2002
BseDI CCNNGG 3 cut(s) 223, 1787, 1824
BseGI GGATG 7 cut(s) 194, 1070, 1379, 1897, 1979, 2008, 2071
BseJI GATNNNNATC 1 cut(s) 1425
BseLI CCNNNNNNNGG 4 cut(s) 15, 1510, 1996, 2053
BseMI GCAATG 4 cut(s) 560, 603, 665, 1143
BseMII CTCAG 9 cut(s) 247, 564, 632, 798, 878, 1197, 1508, 1800, 1933
BseNI ACTGG 2 cut(s) 882, 1481
BseRI GAGGAG 1 cut(s) 1924
BseSI GKGCMC 2 cut(s) 1273, 1754
BseXI GCAGC 4 cut(s) 487, 1792, 1861, 1889
BseYI CCCAGC 2 cut(s) 1682, 1956
BsgI GTGCAG 1 cut(s) 158
Bsh1236I CGCG 1 cut(s) 71
Bsh1285I CGRYCG 1 cut(s) 1637
BshFI GGCC 2 cut(s) 1388, 1752
BshNI GGYRCC 2 cut(s) 227, 861
BshVI ATCGAT 2 cut(s) 1483, 2002
BsiEI CGRYCG 1 cut(s) 1637
BsiHKAI GWGCWC 1 cut(s) 1650
BsiHKCI CYCGRG 1 cut(s) 1740
BsiSI CCGG 1 cut(s) 1947
BslI CCNNNNNNNGG 4 cut(s) 15, 1510, 1996, 2053
BsmAI GTCTC 2 cut(s) 1467, 2067
BsmI GAATGC 1 cut(s) 1777
BsnI GGCC 2 cut(s) 1388, 1752
BsoBI CYCGRG 1 cut(s) 1740
Bsp120I GGGCCC 1 cut(s) 1750
Bsp1286I GDGCHC 3 cut(s) 1273, 1650, 1754
Bsp1720I GCTNAGC 1 cut(s) 1464
Bsp19I CCATGG 1 cut(s) 1824
BspACI CCGC 3 cut(s) 69, 588, 1997
BspANI GGCC 2 cut(s) 1388, 1752
BspCNI CTCAG 9 cut(s) 246, 565, 633, 799, 879, 1198, 1509, 1801, 1932
BspDI ATCGAT 2 cut(s) 1483, 2002
BspFNI CGCG 1 cut(s) 71
BspHI TCATGA 2 cut(s) 360, 1159
BspLI GGNNCC 5 cut(s) 229, 863, 1751, 1752, 1830
BspMAI CTGCAG 1 cut(s) 1879
BspMI ACCTGC 2 cut(s) 661, 1565
BspPI GGATC 3 cut(s) 119, 1674, 2007
BspT107I GGYRCC 2 cut(s) 227, 861
BspTI CTTAAG 1 cut(s) 298
BsrDI GCAATG 4 cut(s) 560, 603, 665, 1143
BsrI ACTGG 2 cut(s) 882, 1481
BssECI CCNNGG 3 cut(s) 223, 1787, 1824
BssNI GRCGYC 1 cut(s) 228
BssT1I CCWWGG 2 cut(s) 223, 1824
Bst2UI CCWGG 5 cut(s) 154, 1390, 1643, 1788, 2048
Bst4CI ACNGT 6 cut(s) 18, 628, 960, 1061, 1120, 1234
Bst6I CTCTTC 2 cut(s) 1193, 1401
BstACI GRCGYC 1 cut(s) 228
BstAFI CTTAAG 1 cut(s) 298
BstAPI GCANNNNNTGC 2 cut(s) 938, 1802
BstC8I GCNNGC 6 cut(s) 993, 1251, 1564, 1657, 1680, 1860
BstDSI CCRYGG 1 cut(s) 1824
BstF5I GGATG 7 cut(s) 194, 1070, 1379, 1897, 1979, 2008, 2071
BstFNI CGCG 1 cut(s) 71
BstH2I RGCGCY 1 cut(s) 231
BstHHI GCGC 1 cut(s) 230
BstMAI GTCTC 2 cut(s) 1467, 2067
BstMCI CGRYCG 1 cut(s) 1637
BstMWI GCNNNNNNNGC 4 cut(s) 938, 1684, 1783, 1802
BstNI CCWGG 5 cut(s) 154, 1390, 1643, 1788, 2048
BstNSI RCATGY 4 cut(s) 29, 461, 995, 1691
BstSCI CCNGG 6 cut(s) 152, 1388, 1641, 1786, 1945, 2046
BstSFI CTRYAG 1 cut(s) 1875
BstSLI GKGCMC 2 cut(s) 1273, 1754
BstUI CGCG 1 cut(s) 71
BstV1I GCAGC 4 cut(s) 487, 1792, 1861, 1889
BstV2I GAAGAC 1 cut(s) 244
BstX2I RGATCY 2 cut(s) 1426, 1666
BstYI RGATCY 2 cut(s) 1426, 1666
Bsu15I ATCGAT 2 cut(s) 1483, 2002
Bsu36I CCTNAGG 2 cut(s) 867, 1919
BsuRI GGCC 2 cut(s) 1388, 1752
BsuTUI ATCGAT 2 cut(s) 1483, 2002
BtgI CCRYGG 1 cut(s) 1824
BtsCI GGATG 7 cut(s) 194, 1070, 1379, 1897, 1979, 2008, 2071
BtsIMutI CAGTG 3 cut(s) 271, 875, 1222
BveI ACCTGC 2 cut(s) 661, 1565
Cac8I GCNNGC 6 cut(s) 993, 1251, 1564, 1657, 1680, 1860
CaiI CAGNNNCTG 2 cut(s) 626, 1787
CciI TCATGA 2 cut(s) 360, 1159
CfoI GCGC 1 cut(s) 230
Cfr13I GGNCC 2 cut(s) 1750, 1751
ClaI ATCGAT 2 cut(s) 1483, 2002
CseI GACGC 1 cut(s) 1184
Csp6I GTAC 5 cut(s) 373, 862, 1057, 1300, 1553
CviQI GTAC 5 cut(s) 373, 862, 1057, 1300, 1553
DinI GGCGCC 1 cut(s) 229
Eam1104I CTCTTC 2 cut(s) 1193, 1401
EarI CTCTTC 2 cut(s) 1193, 1401
Eco130I CCWWGG 2 cut(s) 223, 1824
Eco24I GRGCYC 1 cut(s) 1754
Eco32I GATATC 1 cut(s) 840
Eco81I CCTNAGG 2 cut(s) 867, 1919
Eco88I CYCGRG 1 cut(s) 1740
EcoO109I RGGNCCY 2 cut(s) 1750, 1751
EcoRI GAATTC 1 cut(s) 559
EcoRII CCWGG 5 cut(s) 152, 1388, 1641, 1786, 2046
EcoRV GATATC 1 cut(s) 840
EcoT14I CCWWGG 2 cut(s) 223, 1824
EcoT22I ATGCAT 3 cut(s) 896, 993, 1379
EcoT38I GRGCYC 1 cut(s) 1754
EgeI GGCGCC 1 cut(s) 229
EheI GGCGCC 1 cut(s) 229
ErhI CCWWGG 2 cut(s) 223, 1824
FauI CCCGC 1 cut(s) 76
FauNDI CATATG 1 cut(s) 484
FbaI TGATCA 1 cut(s) 1162
FblI GTMKAC 1 cut(s) 1633
Fnu4HI GCNGC 4 cut(s) 501, 1806, 1875, 1878
FokI GGATG 7 cut(s) 181, 1077, 1386, 1904, 1986, 1995, 2078
FriOI GRGCYC 1 cut(s) 1754
Fsp4HI GCNGC 4 cut(s) 501, 1806, 1875, 1878
FspBI CTAG 6 cut(s) 432, 1265, 1274, 1352, 1430, 1673
GlaI GCGC 1 cut(s) 229
GluI GCNGC 4 cut(s) 501, 1806, 1875, 1878
GsaI CCCAGC 2 cut(s) 1686, 1960
GsuI CTGGAG 3 cut(s) 122, 899, 2069
HaeII RGCGCY 1 cut(s) 231
HaeIII GGCC 2 cut(s) 1388, 1752
HapII CCGG 1 cut(s) 1947
HgaI GACGC 1 cut(s) 1184
HhaI GCGC 1 cut(s) 230
Hin1I GRCGYC 1 cut(s) 228
Hin6I GCGC 1 cut(s) 228
HinP1I GCGC 1 cut(s) 228
HincII GTYRAC 1 cut(s) 1634
HindII GTYRAC 1 cut(s) 1634
HindIII AAGCTT 2 cut(s) 1394, 1814
HinfI GANTC 7 cut(s) 448, 479, 617, 815, 872, 1212, 1261
HpaII CCGG 1 cut(s) 1947
HphI GGTGA 4 cut(s) 332, 475, 779, 1318
Hpy166II GTNNAC 5 cut(s) 346, 581, 1570, 1634, 1979
Hpy188III TCNNGA 6 cut(s) 21, 109, 361, 852, 1160, 1586
Hpy8I GTNNAC 5 cut(s) 346, 581, 1570, 1634, 1979
HpyAV CCTTC 8 cut(s) 52, 56, 290, 805, 1301, 1504, 1583, 1588
HpyCH4III ACNGT 6 cut(s) 18, 628, 960, 1061, 1120, 1234
HpyF10VI GCNNNNNNNGC 4 cut(s) 938, 1684, 1783, 1802
Hsp92I GRCGYC 1 cut(s) 228
HspAI GCGC 1 cut(s) 228
KasI GGCGCC 1 cut(s) 227
KpnI GGTACC 1 cut(s) 865
Ksp22I TGATCA 1 cut(s) 1162
LmnI GCTCC 2 cut(s) 880, 1645
Lsp1109I GCAGC 4 cut(s) 487, 1792, 1861, 1889
LweI GCATC 5 cut(s) 418, 881, 1364, 1726, 2056
MaeI CTAG 6 cut(s) 432, 1265, 1274, 1352, 1430, 1673
MaeIII GTNAC 6 cut(s) 266, 622, 1105, 1167, 1432, 1537
MboII GAAGA 5 cut(s) 244, 809, 939, 1180, 1418
MflI RGATCY 2 cut(s) 1426, 1666
MhlI GDGCHC 3 cut(s) 1273, 1650, 1754
Mly113I GGCGCC 1 cut(s) 228
MlyI GAGTC 1 cut(s) 809
Mph1103I ATGCAT 3 cut(s) 896, 993, 1379
MroXI GAANNNNTTC 1 cut(s) 1012
MseI TTAA 8 cut(s) 299, 633, 962, 1143, 1239, 1338, 1760, 2039
MslI CAYNNNNRTG 4 cut(s) 456, 996, 1382, 1692
MspA1I CMGCKG 1 cut(s) 1880
MspCI CTTAAG 1 cut(s) 298
MspI CCGG 1 cut(s) 1947
MspR9I CCNGG 6 cut(s) 154, 1390, 1643, 1788, 1947, 2048
Mva1269I GAATGC 1 cut(s) 1777
MvaI CCWGG 5 cut(s) 154, 1390, 1643, 1788, 2048
MvnI CGCG 1 cut(s) 71
MwoI GCNNNNNNNGC 4 cut(s) 938, 1684, 1783, 1802
NarI GGCGCC 1 cut(s) 228
NciI CCSGG 1 cut(s) 1947
NcoI CCATGG 1 cut(s) 1824
NdeI CATATG 1 cut(s) 484
NlaIV GGNNCC 5 cut(s) 229, 863, 1751, 1752, 1830
NmuCI GTSAC 4 cut(s) 266, 1105, 1167, 1432
NsiI ATGCAT 3 cut(s) 896, 993, 1379
NspI RCATGY 4 cut(s) 29, 461, 995, 1691
PaeI GCATGC 1 cut(s) 995
PagI TCATGA 2 cut(s) 360, 1159
PaqCI CACCTGC 1 cut(s) 661
PciI ACATGT 1 cut(s) 25
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PctI GAATGC 1 cut(s) 1777
PdmI GAANNNNTTC 1 cut(s) 1012
PfeI GAWTC 6 cut(s) 448, 479, 617, 872, 1212, 1261
PkrI GCNGC 4 cut(s) 502, 1807, 1876, 1879
PleI GAGTC 1 cut(s) 809
PluTI GGCGCC 1 cut(s) 231
PpsI GAGTC 1 cut(s) 809
PscI ACATGT 1 cut(s) 25
PsiI TTATAA 1 cut(s) 1820
Psp6I CCWGG 5 cut(s) 152, 1388, 1641, 1786, 2046
PspFI CCCAGC 2 cut(s) 1682, 1956
PspGI CCWGG 5 cut(s) 152, 1388, 1641, 1786, 2046
PspN4I GGNNCC 5 cut(s) 229, 863, 1751, 1752, 1830
PspOMI GGGCCC 1 cut(s) 1750
PspPI GGNCC 2 cut(s) 1750, 1751
PstI CTGCAG 1 cut(s) 1879
PstNI CAGNNNCTG 2 cut(s) 626, 1787
PsuI RGATCY 2 cut(s) 1426, 1666
PvuII CAGCTG 1 cut(s) 1880
RsaI GTAC 5 cut(s) 374, 863, 1058, 1301, 1554
RsaNI GTAC 5 cut(s) 373, 862, 1057, 1300, 1553
RseI CAYNNNNRTG 4 cut(s) 456, 996, 1382, 1692
SalI GTCGAC 1 cut(s) 1632
SaqAI TTAA 8 cut(s) 299, 633, 962, 1143, 1239, 1338, 1760, 2039
SatI GCNGC 4 cut(s) 501, 1806, 1875, 1878
Sau96I GGNCC 2 cut(s) 1750, 1751
ScaI AGTACT 1 cut(s) 1554
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 6 cut(s) 154, 1390, 1643, 1788, 1947, 2048
SduI GDGCHC 3 cut(s) 1273, 1650, 1754
SfaNI GCATC 5 cut(s) 418, 881, 1364, 1726, 2056
SfcI CTRYAG 1 cut(s) 1875
SfoI GGCGCC 1 cut(s) 229
SmiMI CAYNNNNRTG 4 cut(s) 456, 996, 1382, 1692
SmlI CTYRAG 1 cut(s) 298
SmoI CTYRAG 1 cut(s) 298
SphI GCATGC 1 cut(s) 995
SsiI CCGC 3 cut(s) 69, 588, 1997
SspDI GGCGCC 1 cut(s) 227
SspMI CTAG 6 cut(s) 432, 1265, 1274, 1352, 1430, 1673
StyD4I CCNGG 6 cut(s) 152, 1388, 1641, 1786, 1945, 2046
StyI CCWWGG 2 cut(s) 223, 1824
TaaI ACNGT 6 cut(s) 18, 628, 960, 1061, 1120, 1234
TaqI TCGA 7 cut(s) 207, 853, 1087, 1221, 1483, 1633, 2002
TaqII GACCGA 2 cut(s) 285, 1651
TatI WGTACW 2 cut(s) 1056, 1552
TfiI GAWTC 6 cut(s) 448, 479, 617, 872, 1212, 1261
Tru1I TTAA 8 cut(s) 299, 633, 962, 1143, 1239, 1338, 1760, 2039
Tru9I TTAA 8 cut(s) 299, 633, 962, 1143, 1239, 1338, 1760, 2039
TscAI CASTG 3 cut(s) 271, 882, 1222
TseFI GTSAC 4 cut(s) 266, 1105, 1167, 1432
TseI GCWGC 4 cut(s) 500, 1805, 1874, 1877
Tsp45I GTSAC 4 cut(s) 266, 1105, 1167, 1432
TspGWI ACGGA 1 cut(s) 1021
TspRI CASTG 3 cut(s) 271, 882, 1222
Vha464I CTTAAG 1 cut(s) 298
XapI RAATTY 5 cut(s) 53, 323, 559, 605, 1078
XceI RCATGY 4 cut(s) 29, 461, 995, 1691
XmiI GTMKAC 1 cut(s) 1633
XmnI GAANNNNTTC 1 cut(s) 1012
XspI CTAG 6 cut(s) 432, 1265, 1274, 1352, 1430, 1673
ZrmI AGTACT 1 cut(s) 1554
Zsp2I ATGCAT 3 cut(s) 896, 993, 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.