Prupe.4G153800_v2.0.a1

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
8810777 .. 8815810
5034 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G153800.1

Sequence Viewer

Length: 975 bp
ATGTTCCAGAGGTTTGAGGAGTGGATGACTAAACATGGACGAGTGTATAAGGATGCACAGGAGAAGGAGCTTCGCTACGACATTTTCAAGTCCAATGTGGAATTTATAGAAGCTTTTAACAAGAACAAGGACGGAAGGAAGTACACACTAAGCATCAATAAGTTTGCGGATCGCAAGAATGAGGAACTTCGAGCAATGCGTAATGGATACAATGTGAGGCAGCATCTCTCCAAAGAAGTGATCACCTCCAACTCCATGAAAGTAAGTCCAAATACATTTTTCAAATATGCAAATGTAACCGTGGTGCCACTTTCCTGGGATTGGACTACAAGTGCTGTAACCCCGGTCAAGGACCAAGGATATGATTGTGGGAGTTGTTGGTCGTTCGCAACAGTGGCAGTTGTAGAAGGGCTTAACTCTATTATGACAGGAAACTTAATTTCGCTATCAGAACAAGAGATTATCGATTGCACAACTAGTTTCGAAGATGATGGCTGCCATGGTGGTTTTGTGGAGAAAGCCTTCGAATACATGATCCAACGCAACATGAGCCTGTCAACTGAAGATGGCTACCCTTACAAGGCTGTAGATGGTGGCGTTTGCTTGGATGACTTCAATAATGTTGCCTCCGGTGCCATAACTATAACCGGGTACAAGCAAGTGCCTCAAAACAACGAAATTGCTTTGTTGCTGGCTGTTGCCAACCAGCCAGTTTCAGTTTATATTGATGCAGAAGCAGAAGAGTTCAAACATTATTCGGGTGGCGTGTACACTGGACCATGTGGTACAAACTTAACCCATGCTGTTACTATAGTTGGATATGATACTACTGAGGATGATGAGAAGTATTGGCTTATCAAAAATTCTTGGGGAGAAGAATGGGGGGAGAGTGGATACATGAGGATTCAAAGAGACTTTGATGCCAATGAAGGACTATGTGGTATTGCTATGGGAGCTTTTTATCCAACCGTATGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

325

Amino Acids

36.55

Weight (kDa)

4.79

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019773)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 304, 632
AciI CCGC 1 cut(s) 167
AclWI GGATC 2 cut(s) 177, 529
AcsI RAATTY 2 cut(s) 101, 862
AcuI CTGAAG 1 cut(s) 582
AfaI GTAC 4 cut(s) 143, 653, 770, 787
AfiI CCNNNNNNNGG 3 cut(s) 321, 349, 580
AgsI TTSAA 5 cut(s) 88, 283, 616, 748, 908
AhlI ACTAGT 1 cut(s) 476
AjnI CCWGG 1 cut(s) 314
AluBI AGCT 3 cut(s) 70, 113, 956
AluI AGCT 3 cut(s) 70, 113, 956
Alw26I GTCTC 1 cut(s) 906
AlwI GGATC 2 cut(s) 177, 529
ApeKI GCWGC 2 cut(s) 220, 495
ApoI RAATTY 2 cut(s) 101, 862
Asp700I GAANNNNTTC 1 cut(s) 521
AspS9I GGNCC 2 cut(s) 352, 776
AsuC2I CCSGG 2 cut(s) 344, 649
AsuHPI GGTGA 1 cut(s) 235
AsuII TTCGAA 2 cut(s) 483, 525
AvaII GGWCC 2 cut(s) 352, 776
BanI GGYRCC 2 cut(s) 304, 632
BbvI GCAGC 2 cut(s) 232, 482
BccI CCATC 3 cut(s) 485, 560, 584
BciT130I CCWGG 1 cut(s) 316
BciVI GTATCC 2 cut(s) 200, 887
BclI TGATCA 1 cut(s) 240
BcnI CCSGG 2 cut(s) 344, 649
BcoDI GTCTC 1 cut(s) 906
BcuI ACTAGT 1 cut(s) 476
BfaI CTAG 1 cut(s) 477
BfmI CTRYAG 2 cut(s) 585, 810
BfuI GTATCC 2 cut(s) 200, 887
BisI GCNGC 2 cut(s) 221, 496
BlsI GCNGC 2 cut(s) 222, 497
Bme1390I CCNGG 3 cut(s) 316, 344, 649
Bme18I GGWCC 2 cut(s) 352, 776
BmgT120I GGNCC 2 cut(s) 352, 776
BmiI GGNNCC 2 cut(s) 306, 634
BmrFI CCNGG 3 cut(s) 316, 344, 649
BmsI GCATC 5 cut(s) 43, 162, 232, 718, 910
Bpu14I TTCGAA 2 cut(s) 483, 525
BpuMI CCSGG 2 cut(s) 344, 649
Bsa29I ATCGAT 1 cut(s) 465
BsaJI CCNNGG 5 cut(s) 300, 315, 342, 355, 499
BsaWI WCCGGW 1 cut(s) 629
Bsc4I CCNNNNNNNGG 3 cut(s) 321, 349, 580
Bse1I ACTGG 2 cut(s) 710, 778
Bse3DI GCAATG 1 cut(s) 201
BseBI CCWGG 1 cut(s) 316
BseCI ATCGAT 1 cut(s) 465
BseDI CCNNGG 5 cut(s) 300, 315, 342, 355, 499
BseGI GGATG 4 cut(s) 30, 58, 613, 841
BseLI CCNNNNNNNGG 3 cut(s) 321, 349, 580
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 1 cut(s) 822
BseNI ACTGG 2 cut(s) 710, 778
BseRI GAGGAG 1 cut(s) 32
BseXI GCAGC 2 cut(s) 232, 482
BshNI GGYRCC 2 cut(s) 304, 632
BshVI ATCGAT 1 cut(s) 465
BsiSI CCGG 3 cut(s) 344, 630, 648
BslI CCNNNNNNNGG 3 cut(s) 321, 349, 580
BsmAI GTCTC 1 cut(s) 906
Bsp119I TTCGAA 2 cut(s) 483, 525
Bsp1407I TGTACA 1 cut(s) 768
Bsp143I GATC 3 cut(s) 169, 240, 534
Bsp19I CCATGG 1 cut(s) 499
BspACI CCGC 1 cut(s) 167
BspCNI CTCAG 1 cut(s) 823
BspDI ATCGAT 1 cut(s) 465
BspLI GGNNCC 2 cut(s) 306, 634
BspPI GGATC 2 cut(s) 177, 529
BspT104I TTCGAA 2 cut(s) 483, 525
BspT107I GGYRCC 2 cut(s) 304, 632
BsrDI GCAATG 1 cut(s) 201
BsrGI TGTACA 1 cut(s) 768
BsrI ACTGG 2 cut(s) 710, 778
BssECI CCNNGG 5 cut(s) 300, 315, 342, 355, 499
BssMI GATC 3 cut(s) 169, 240, 534
BssT1I CCWWGG 2 cut(s) 355, 499
Bst2UI CCWGG 1 cut(s) 316
Bst4CI ACNGT 3 cut(s) 301, 394, 970
Bst6I CTCTTC 1 cut(s) 735
BstAUI TGTACA 1 cut(s) 768
BstBI TTCGAA 2 cut(s) 483, 525
BstC8I GCNNGC 1 cut(s) 693
BstDEI CTNAG 2 cut(s) 149, 831
BstDSI CCRYGG 2 cut(s) 300, 499
BstF5I GGATG 4 cut(s) 30, 58, 613, 841
BstKTI GATC 3 cut(s) 172, 243, 537
BstMAI GTCTC 1 cut(s) 906
BstMBI GATC 3 cut(s) 169, 240, 534
BstMWI GCNNNNNNNGC 4 cut(s) 395, 549, 632, 953
BstNI CCWGG 1 cut(s) 316
BstSCI CCNGG 3 cut(s) 314, 342, 647
BstSFI CTRYAG 2 cut(s) 585, 810
BstV1I GCAGC 2 cut(s) 232, 482
BstXI CCANNNNNNTGG 1 cut(s) 315
Bsu15I ATCGAT 1 cut(s) 465
BsuI GTATCC 2 cut(s) 200, 887
BsuTUI ATCGAT 1 cut(s) 465
BtgI CCRYGG 2 cut(s) 300, 499
BtsCI GGATG 4 cut(s) 30, 58, 613, 841
BtsIMutI CAGTG 2 cut(s) 399, 771
Cac8I GCNNGC 1 cut(s) 693
Cfr13I GGNCC 2 cut(s) 352, 776
ClaI ATCGAT 1 cut(s) 465
Csp6I GTAC 4 cut(s) 142, 652, 769, 786
CviAII CATG 8 cut(s) 35, 256, 500, 532, 547, 780, 800, 898
CviQI GTAC 4 cut(s) 142, 652, 769, 786
DdeI CTNAG 2 cut(s) 149, 831
DpnI GATC 3 cut(s) 171, 242, 536
DpnII GATC 3 cut(s) 169, 240, 534
Eam1104I CTCTTC 1 cut(s) 735
EarI CTCTTC 1 cut(s) 735
Eco130I CCWWGG 2 cut(s) 355, 499
Eco47I GGWCC 2 cut(s) 352, 776
Eco57I CTGAAG 1 cut(s) 582
EcoRII CCWGG 1 cut(s) 314
EcoT14I CCWWGG 2 cut(s) 355, 499
ErhI CCWWGG 2 cut(s) 355, 499
FaeI CATG 8 cut(s) 38, 259, 503, 535, 550, 783, 803, 901
FatI CATG 8 cut(s) 34, 255, 499, 531, 546, 779, 799, 897
FbaI TGATCA 1 cut(s) 240
Fnu4HI GCNGC 2 cut(s) 221, 496
FokI GGATG 4 cut(s) 37, 65, 620, 848
Fsp4HI GCNGC 2 cut(s) 221, 496
FspBI CTAG 1 cut(s) 477
GluI GCNGC 2 cut(s) 221, 496
HapII CCGG 3 cut(s) 344, 630, 648
Hin1II CATG 8 cut(s) 38, 259, 503, 535, 550, 783, 803, 901
HincII GTYRAC 1 cut(s) 558
HindII GTYRAC 1 cut(s) 558
HindIII AAGCTT 1 cut(s) 111
HinfI GANTC 1 cut(s) 904
HpaII CCGG 3 cut(s) 344, 630, 648
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 4 cut(s) 144, 558, 769, 771
Hpy188I TCNGA 1 cut(s) 451
Hpy188III TCNNGA 1 cut(s) 7
Hpy8I GTNNAC 4 cut(s) 144, 558, 769, 771
HpyAV CCTTC 5 cut(s) 58, 129, 401, 532, 923
HpyCH4III ACNGT 3 cut(s) 301, 394, 970
HpyCH4V TGCA 4 cut(s) 56, 290, 471, 731
HpyF10VI GCNNNNNNNGC 4 cut(s) 395, 549, 632, 953
HpyF3I CTNAG 2 cut(s) 149, 831
Hsp92II CATG 8 cut(s) 38, 259, 503, 535, 550, 783, 803, 901
Ksp22I TGATCA 1 cut(s) 240
Kzo9I GATC 3 cut(s) 169, 240, 534
LmnI GCTCC 2 cut(s) 67, 953
Lsp1109I GCAGC 2 cut(s) 232, 482
LweI GCATC 5 cut(s) 43, 162, 232, 718, 910
MaeI CTAG 1 cut(s) 477
MaeIII GTNAC 3 cut(s) 295, 337, 805
MalI GATC 3 cut(s) 171, 242, 536
MboI GATC 3 cut(s) 169, 240, 534
MboII GAAGA 4 cut(s) 497, 575, 752, 887
MluCI AATT 4 cut(s) 101, 438, 678, 862
MmeI TCCRAC 3 cut(s) 273, 562, 796
MnlI CCTC 9 cut(s) 3, 10, 175, 210, 256, 637, 675, 826, 894
MroXI GAANNNNTTC 1 cut(s) 521
MseI TTAA 4 cut(s) 117, 414, 437, 794
MspI CCGG 3 cut(s) 344, 630, 648
MspR9I CCNGG 3 cut(s) 316, 344, 649
MvaI CCWGG 1 cut(s) 316
MwoI GCNNNNNNNGC 4 cut(s) 395, 549, 632, 953
NciI CCSGG 2 cut(s) 344, 649
NcoI CCATGG 1 cut(s) 499
NdeII GATC 3 cut(s) 169, 240, 534
NlaIII CATG 8 cut(s) 38, 259, 503, 535, 550, 783, 803, 901
NlaIV GGNNCC 2 cut(s) 306, 634
NspV TTCGAA 2 cut(s) 483, 525
PcsI WCGNNNNNNNCGW 1 cut(s) 196
PdmI GAANNNNTTC 1 cut(s) 521
PfeI GAWTC 1 cut(s) 904
PkrI GCNGC 2 cut(s) 222, 497
Psp6I CCWGG 1 cut(s) 314
PspGI CCWGG 1 cut(s) 314
PspN4I GGNNCC 2 cut(s) 306, 634
PspPI GGNCC 2 cut(s) 352, 776
RsaI GTAC 4 cut(s) 143, 653, 770, 787
RsaNI GTAC 4 cut(s) 142, 652, 769, 786
SaqAI TTAA 4 cut(s) 117, 414, 437, 794
SatI GCNGC 2 cut(s) 221, 496
Sau3AI GATC 3 cut(s) 169, 240, 534
Sau96I GGNCC 2 cut(s) 352, 776
ScrFI CCNGG 3 cut(s) 316, 344, 649
SetI ASST 5 cut(s) 14, 72, 115, 248, 958
SfaNI GCATC 5 cut(s) 43, 162, 232, 718, 910
SfcI CTRYAG 2 cut(s) 585, 810
SfuI TTCGAA 2 cut(s) 483, 525
SinI GGWCC 2 cut(s) 352, 776
SpeI ACTAGT 1 cut(s) 476
Sse9I AATT 4 cut(s) 101, 438, 678, 862
SsiI CCGC 1 cut(s) 167
SspMI CTAG 1 cut(s) 477
StyD4I CCNGG 3 cut(s) 314, 342, 647
StyI CCWWGG 2 cut(s) 355, 499
TaaI ACNGT 3 cut(s) 301, 394, 970
TaqI TCGA 4 cut(s) 190, 465, 483, 525
TasI AATT 4 cut(s) 101, 438, 678, 862
TatI WGTACW 2 cut(s) 141, 768
TfiI GAWTC 1 cut(s) 904
Tru1I TTAA 4 cut(s) 117, 414, 437, 794
Tru9I TTAA 4 cut(s) 117, 414, 437, 794
TscAI CASTG 2 cut(s) 399, 778
TseI GCWGC 2 cut(s) 220, 495
TspDTI ATGAA 2 cut(s) 272, 942
TspGWI ACGGA 1 cut(s) 147
TspRI CASTG 2 cut(s) 399, 778
VpaK11BI GGWCC 2 cut(s) 352, 776
XapI RAATTY 2 cut(s) 101, 862
XmnI GAANNNNTTC 1 cut(s) 521
XspI CTAG 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.