Prupe.4G161700_v2.0.a1

Anaphase-promoting complex subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9270185 .. 9277513
7329 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G161700.2

Sequence Viewer

Length: 1665 bp
ATGAGAGAAGAAGAGATAGAAAAGCTTCGTGGGGTAGTGAGGGACTGCGTGACCAAGCACCTCTACTCCTCCGCCATATTCTTCGCTGATAAAGTCGCTGCCTTTACCAATGACCCTGCTGATATCTACATGCAGGCTCAGGCTCTCTTTCTCGGCCGCCATTATCGACGAGCCTACCACCTCCTCAATGCCTCCCAGATCGTTCTCCGTGACCTCCGATTTCGTTACCTCGCTGCAAAGTGCCTTGAGGAGCTGAAGGAGTGGGATCAATGCATATTAATGCTTGACGATGCCAAAGTGGATGAACATGGGAATCTGAATGACACAAAGGATTCAAATATCATGTACTTGGATAAAGATGGCGAAGATCATGAGATCAATATATCTTCTGCAATATGCTTTTTACGTGGTAAGGCATATGAAGCATTGGAAAACCGTGTCCAGGCCCGGCATTGGTACAAAGCTGCTATCAAAGCCGATCCCTTATGTTATGAGGCATTGGAATGTCTTATTGAAAATCACATGCTTACATATGAGGAAGAGGCAAGTCTACTTGCGTCATTACAATTTGGTCCTGAAGATGGATGGCTCTCATCATTCTACTCATGCTTAATTAAAAAGTACGACAAAGAAAATGTTGTAGAAGCAAAATTCAGAGAACTTGAAAAAGAGAAGTGTAATAGTAACACTTCTGATCCATCCTTCTTTCGTACTCTGAAAACCAACACTGACCTTCTTGCCTGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAAAAATGCTTTGAGCTAACTTCTGTACTACTTGAAAAAGACCCTTTCCATCTGAAGAGTACATTGGTGCATCTAGCCGCTGCTATGGAACTTGGGCATTCAAATGAGCTCTATCTTATGGCATGCAATTTAGTGAAGGACTATCCTCAAAAGGCCTTATCATGGTTTGCCGTTGGATGTTACTATTATTGTATAAAAAAGTTTGCTGAGTCACACCGTTATTTCAGCAAGGCTACCAGTCTAGATGGGACCTTTCCACCTGCTTGGATTGGATATGGGAATGCTTATGCTGCTAAAGAAGAGGGTGATCAAGCAATGTCAGCTTATCGCACTGCTGCTCGTTTGTTTCCAGGGTGTCATTTACCAACTTTGTACATTGGGATGGAGTACATGCGAACCAACAGCTTTAAGCTCGCTGAACAGTTTTTTATGCAGGCGAAGACCACTTGCCCATCAGATCCACTAGTATATAATGAACTTGGTGTTCATGAAGTTTATGATATTCTGTCATTAATGTGGACTATTAGGTTGTATTATCGAATCTTTTGCATGTATAACAAAGCTGTGTGGTGGTTTGAGAAAACTTTGGCTCAAATTCCTTCCCCTTTAAGTGAAATGTGGGAACCAACTGTGGTTAATCTAGCTCATGCATACAGAAAACTGAAGATGTACAATGAAGCTATTTCATACTATGAGAAAGCACTTGCATTGTCAACCAGAAGTGTGAGTACTTATGCAGGTCTTGCATATGCTTACCATTTACAGGATAATTTTACGGCAGCGATTACATACTATCATAAAGCTCTATGGCTACAACCAGATGATCATTTTTGCACTGAAATGTTAAGTTTGGCTTTAGCAGATGAAGCCCGTGGACCACAGAACTGA

Protein Analysis

555

Amino Acids

64.14

Weight (kDa)

5.75

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1045
Acc36I ACCTGC 2 cut(s) 1045, 1505
AccI GTMKAC 1 cut(s) 550
AciI CCGC 3 cut(s) 72, 157, 855
AclWI GGATC 4 cut(s) 273, 473, 689, 1229
AcoI YGGCCR 1 cut(s) 154
AcsI RAATTY 2 cut(s) 650, 1371
AcuI CTGAAG 4 cut(s) 275, 597, 851, 1460
AfiI CCNNNNNNNGG 5 cut(s) 442, 453, 581, 939, 1540
AgsI TTSAA 5 cut(s) 336, 515, 665, 812, 879
AhlI ACTAGT 1 cut(s) 1240
AjnI CCWGG 2 cut(s) 441, 1126
AjuI GAANNNNNNNTTGG 2 cut(s) 824, 856
Alw21I GWGCWC 1 cut(s) 888
AlwI GGATC 4 cut(s) 273, 473, 689, 1229
AoxI GGCC 3 cut(s) 154, 444, 930
ApeKI GCWGC 7 cut(s) 98, 233, 464, 857, 1067, 1112, 1556
ApoI RAATTY 2 cut(s) 650, 1371
AseI ATTAAT 2 cut(s) 278, 1289
Asp700I GAANNNNTTC 1 cut(s) 24
AspS9I GGNCC 4 cut(s) 445, 572, 1026, 1652
AsuC2I CCSGG 1 cut(s) 448
AsuHPI GGTGA 2 cut(s) 782, 1094
AvaII GGWCC 3 cut(s) 572, 1026, 1652
BanII GRGCYC 1 cut(s) 888
BarI GAAGNNNNNNTAC 2 cut(s) 1489, 1521
BbsI GAAGAC 1 cut(s) 1223
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 7 cut(s) 85, 220, 451, 844, 1054, 1099, 1568
BccI CCATC 9 cut(s) 353, 575, 579, 706, 768, 834, 1016, 1153, 1237
BceAI ACGGC 2 cut(s) 932, 1569
BcgI CGANNNNNNTGC 2 cut(s) 1305, 1339
BciT130I CCWGG 2 cut(s) 443, 1128
BclI TGATCA 2 cut(s) 1084, 1600
BcnI CCSGG 1 cut(s) 448
BcuI ACTAGT 1 cut(s) 1240
BfaI CTAG 4 cut(s) 851, 1019, 1241, 1418
BfuAI ACCTGC 2 cut(s) 1045, 1505
BisI GCNGC 9 cut(s) 99, 157, 234, 465, 855, 858, 1068, 1113, 1557
BlsI GCNGC 9 cut(s) 100, 158, 235, 466, 856, 859, 1069, 1114, 1558
BmcAI AGTACT 1 cut(s) 1507
Bme1390I CCNGG 3 cut(s) 443, 448, 1128
Bme18I GGWCC 3 cut(s) 572, 1026, 1652
BmgT120I GGNCC 4 cut(s) 445, 572, 1026, 1652
BmiI GGNNCC 2 cut(s) 1027, 1401
BmrFI CCNGG 3 cut(s) 443, 448, 1128
BmsI GCATC 2 cut(s) 280, 856
BpiI GAAGAC 1 cut(s) 1223
Bpu10I CCTNAGC 1 cut(s) 138
BpuEI CTTGAG 1 cut(s) 266
BpuMI CCSGG 1 cut(s) 448
BsaAI YACGTR 1 cut(s) 407
BsaJI CCNNGG 2 cut(s) 1127, 1648
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bsc4I CCNNNNNNNGG 5 cut(s) 442, 453, 581, 939, 1540
Bse1I ACTGG 1 cut(s) 1014
Bse3DI GCAATG 1 cut(s) 1098
BseBI CCWGG 2 cut(s) 443, 1128
BseDI CCNNGG 2 cut(s) 1127, 1648
BseGI GGATG 5 cut(s) 307, 590, 698, 959, 1164
BseLI CCNNNNNNNGG 5 cut(s) 442, 453, 581, 939, 1540
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 2 cut(s) 152, 975
BseNI ACTGG 1 cut(s) 1014
BseRI GAGGAG 3 cut(s) 58, 173, 263
BseX3I CGGCCG 1 cut(s) 154
BseXI GCAGC 7 cut(s) 85, 220, 451, 844, 1054, 1099, 1568
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 3 cut(s) 156, 446, 932
BsiEI CGRYCG 1 cut(s) 157
BsiHKAI GWGCWC 1 cut(s) 888
BsiSI CCGG 1 cut(s) 448
BslFI GGGAC 2 cut(s) 56, 1039
BslI CCNNNNNNNGG 5 cut(s) 442, 453, 581, 939, 1540
BsmFI GGGAC 2 cut(s) 56, 1039
BsmI GAATGC 2 cut(s) 874, 1063
BsnI GGCC 3 cut(s) 156, 446, 932
Bsp1286I GDGCHC 1 cut(s) 888
Bsp1407I TGTACA 2 cut(s) 1149, 1446
Bsp143I GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
BspACI CCGC 3 cut(s) 72, 157, 855
BspANI GGCC 3 cut(s) 156, 446, 932
BspCNI CTCAG 2 cut(s) 151, 976
BspHI TCATGA 2 cut(s) 370, 1264
BspLI GGNNCC 2 cut(s) 1027, 1401
BspMI ACCTGC 2 cut(s) 1045, 1505
BspPI GGATC 4 cut(s) 273, 473, 689, 1229
BsrDI GCAATG 1 cut(s) 1098
BsrGI TGTACA 2 cut(s) 1149, 1446
BsrI ACTGG 1 cut(s) 1014
BssECI CCNNGG 2 cut(s) 1127, 1648
BssMI GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
Bst2UI CCWGG 2 cut(s) 443, 1128
Bst4CI ACNGT 4 cut(s) 437, 995, 1200, 1408
Bst6I CTCTTC 4 cut(s) 6, 534, 827, 1071
BstAPI GCANNNNNTGC 1 cut(s) 1520
BstAUI TGTACA 2 cut(s) 1149, 1446
BstBAI YACGTR 1 cut(s) 407
BstC8I GCNNGC 5 cut(s) 135, 742, 901, 1191, 1212
BstDEI CTNAG 2 cut(s) 138, 984
BstDSI CCRYGG 1 cut(s) 1648
BstF5I GGATG 5 cut(s) 307, 590, 698, 959, 1164
BstKTI GATC 9 cut(s) 201, 268, 370, 378, 481, 697, 1087, 1237, 1603
BstMBI GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 7 cut(s) 422, 473, 746, 1067, 1097, 1520, 1643
BstNI CCWGG 2 cut(s) 443, 1128
BstNSI RCATGY 5 cut(s) 133, 526, 903, 1171, 1330
BstSCI CCNGG 3 cut(s) 441, 446, 1126
BstV1I GCAGC 7 cut(s) 85, 220, 451, 844, 1054, 1099, 1568
BstV2I GAAGAC 1 cut(s) 1223
BstX2I RGATCY 1 cut(s) 1234
BstXI CCANNNNNNTGG 2 cut(s) 767, 1041
BstYI RGATCY 1 cut(s) 1234
BstZI CGGCCG 1 cut(s) 154
BsuRI GGCC 3 cut(s) 156, 446, 932
BtgI CCRYGG 1 cut(s) 1648
BtsCI GGATG 5 cut(s) 307, 590, 698, 959, 1164
BtsI GCAGTG 1 cut(s) 1107
BtsIMutI CAGTG 4 cut(s) 726, 770, 1107, 1611
BveI ACCTGC 2 cut(s) 1045, 1505
Cac8I GCNNGC 5 cut(s) 135, 742, 901, 1191, 1212
CciI TCATGA 2 cut(s) 370, 1264
Cfr13I GGNCC 4 cut(s) 445, 572, 1026, 1652
CseI GACGC 1 cut(s) 546
DdeI CTNAG 2 cut(s) 138, 984
DpnI GATC 9 cut(s) 200, 267, 369, 377, 480, 696, 1086, 1236, 1602
DpnII GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
EaeI YGGCCR 1 cut(s) 154
EagI CGGCCG 1 cut(s) 154
Eam1104I CTCTTC 4 cut(s) 6, 534, 827, 1071
EarI CTCTTC 4 cut(s) 6, 534, 827, 1071
EciI GGCGGA 1 cut(s) 61
Ecl136II GAGCTC 1 cut(s) 886
EclXI CGGCCG 1 cut(s) 154
Eco147I AGGCCT 1 cut(s) 932
Eco24I GRGCYC 1 cut(s) 888
Eco32I GATATC 1 cut(s) 124
Eco47I GGWCC 3 cut(s) 572, 1026, 1652
Eco52I CGGCCG 1 cut(s) 154
Eco53kI GAGCTC 1 cut(s) 886
Eco57I CTGAAG 4 cut(s) 275, 597, 851, 1460
EcoICRI GAGCTC 1 cut(s) 886
EcoO109I RGGNCCY 1 cut(s) 1026
EcoRII CCWGG 2 cut(s) 441, 1126
EcoRV GATATC 1 cut(s) 124
EcoT22I ATGCAT 2 cut(s) 275, 1429
EcoT38I GRGCYC 1 cut(s) 888
FalI AAGNNNNNCTT 2 cut(s) 1615, 1647
FaqI GGGAC 2 cut(s) 56, 1039
FauNDI CATATG 3 cut(s) 418, 532, 1525
FbaI TGATCA 2 cut(s) 1084, 1600
FblI GTMKAC 1 cut(s) 550
Fnu4HI GCNGC 9 cut(s) 99, 157, 234, 465, 855, 858, 1068, 1113, 1557
FokI GGATG 5 cut(s) 314, 597, 685, 966, 1171
FriOI GRGCYC 1 cut(s) 888
Fsp4HI GCNGC 9 cut(s) 99, 157, 234, 465, 855, 858, 1068, 1113, 1557
FspBI CTAG 4 cut(s) 851, 1019, 1241, 1418
GluI GCNGC 9 cut(s) 99, 157, 234, 465, 855, 858, 1068, 1113, 1557
HaeIII GGCC 3 cut(s) 156, 446, 932
HapII CCGG 1 cut(s) 448
HgaI GACGC 1 cut(s) 546
HincII GTYRAC 1 cut(s) 1491
HindII GTYRAC 1 cut(s) 1491
HindIII AAGCTT 1 cut(s) 23
HinfI GANTC 4 cut(s) 313, 332, 986, 1317
HpaII CCGG 1 cut(s) 448
HphI GGTGA 2 cut(s) 782, 1094
Hpy166II GTNNAC 4 cut(s) 551, 1296, 1491, 1652
Hpy188I TCNGA 7 cut(s) 218, 318, 656, 694, 717, 831, 1234
Hpy188III TCNNGA 4 cut(s) 371, 575, 1019, 1265
Hpy8I GTNNAC 4 cut(s) 551, 1296, 1491, 1652
Hpy99I CGWCG 1 cut(s) 171
HpyAV CCTTC 5 cut(s) 250, 712, 743, 907, 1386
HpyCH4III ACNGT 4 cut(s) 437, 995, 1200, 1408
HpyCH4IV ACGT 1 cut(s) 406
HpyF10VI GCNNNNNNNGC 7 cut(s) 422, 473, 746, 1067, 1097, 1520, 1643
HpyF3I CTNAG 2 cut(s) 138, 984
HpySE526I ACGT 1 cut(s) 406
Ksp22I TGATCA 2 cut(s) 1084, 1600
Kzo9I GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 7 cut(s) 85, 220, 451, 844, 1054, 1099, 1568
LweI GCATC 2 cut(s) 280, 856
MaeI CTAG 4 cut(s) 851, 1019, 1241, 1418
MaeII ACGT 1 cut(s) 406
MaeIII GTNAC 6 cut(s) 49, 209, 224, 683, 956, 987
MalI GATC 9 cut(s) 200, 267, 369, 377, 480, 696, 1086, 1236, 1602
MboI GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
MflI RGATCY 1 cut(s) 1234
MhlI GDGCHC 1 cut(s) 888
MluCI AATT 6 cut(s) 566, 612, 650, 904, 1371, 1546
MlyI GAGTC 1 cut(s) 995
MmeI TCCRAC 1 cut(s) 931
Mph1103I ATGCAT 2 cut(s) 275, 1429
MroXI GAANNNNTTC 1 cut(s) 24
MseI TTAA 8 cut(s) 278, 611, 615, 1185, 1289, 1385, 1413, 1622
MslI CAYNNNNRTG 7 cut(s) 278, 502, 765, 879, 1157, 1291, 1616
MspA1I CMGCKG 1 cut(s) 857
MspI CCGG 1 cut(s) 448
MspR9I CCNGG 3 cut(s) 443, 448, 1128
Mva1269I GAATGC 2 cut(s) 874, 1063
MvaI CCWGG 2 cut(s) 443, 1128
MwoI GCNNNNNNNGC 7 cut(s) 422, 473, 746, 1067, 1097, 1520, 1643
NciI CCSGG 1 cut(s) 448
NdeI CATATG 3 cut(s) 418, 532, 1525
NdeII GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
NlaIV GGNNCC 2 cut(s) 1027, 1401
NmeAIII GCCGAG 1 cut(s) 132
NmuCI GTSAC 3 cut(s) 49, 209, 987
NsiI ATGCAT 2 cut(s) 275, 1429
NspI RCATGY 5 cut(s) 133, 526, 903, 1171, 1330
PacI TTAATTAA 1 cut(s) 615
PaeI GCATGC 1 cut(s) 903
PagI TCATGA 2 cut(s) 370, 1264
PaqCI CACCTGC 1 cut(s) 1045
PceI AGGCCT 1 cut(s) 932
PctI GAATGC 2 cut(s) 874, 1063
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 3 cut(s) 313, 332, 1317
PkrI GCNGC 9 cut(s) 100, 158, 235, 466, 856, 859, 1069, 1114, 1558
PleI GAGTC 1 cut(s) 994
PpsI GAGTC 1 cut(s) 994
Ppu21I YACGTR 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 1026
PshBI ATTAAT 2 cut(s) 278, 1289
Psp124BI GAGCTC 1 cut(s) 888
Psp5II RGGWCCY 1 cut(s) 1026
Psp6I CCWGG 2 cut(s) 441, 1126
PspGI CCWGG 2 cut(s) 441, 1126
PspN4I GGNNCC 2 cut(s) 1027, 1401
PspPI GGNCC 4 cut(s) 445, 572, 1026, 1652
PspPPI RGGWCCY 1 cut(s) 1026
PsuI RGATCY 1 cut(s) 1234
RseI CAYNNNNRTG 7 cut(s) 278, 502, 765, 879, 1157, 1291, 1616
SacI GAGCTC 1 cut(s) 888
SaqAI TTAA 8 cut(s) 278, 611, 615, 1185, 1289, 1385, 1413, 1622
SatI GCNGC 9 cut(s) 99, 157, 234, 465, 855, 858, 1068, 1113, 1557
Sau3AI GATC 9 cut(s) 198, 265, 367, 375, 478, 694, 1084, 1234, 1600
Sau96I GGNCC 4 cut(s) 445, 572, 1026, 1652
ScaI AGTACT 1 cut(s) 1507
SchI GAGTC 1 cut(s) 995
ScrFI CCNGG 3 cut(s) 443, 448, 1128
SduI GDGCHC 1 cut(s) 888
SfaNI GCATC 2 cut(s) 280, 856
SinI GGWCC 3 cut(s) 572, 1026, 1652
SmiMI CAYNNNNRTG 7 cut(s) 278, 502, 765, 879, 1157, 1291, 1616
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
SpeI ACTAGT 1 cut(s) 1240
SphI GCATGC 1 cut(s) 903
Sse9I AATT 6 cut(s) 566, 612, 650, 904, 1371, 1546
SseBI AGGCCT 1 cut(s) 932
SsiI CCGC 3 cut(s) 72, 157, 855
SspMI CTAG 4 cut(s) 851, 1019, 1241, 1418
SstI GAGCTC 1 cut(s) 888
StuI AGGCCT 1 cut(s) 932
StyD4I CCNGG 3 cut(s) 441, 446, 1126
TaaI ACNGT 4 cut(s) 437, 995, 1200, 1408
TaiI ACGT 1 cut(s) 409
TaqI TCGA 2 cut(s) 166, 1315
TasI AATT 6 cut(s) 566, 612, 650, 904, 1371, 1546
TatI WGTACW 7 cut(s) 345, 802, 836, 1149, 1164, 1446, 1505
TauI GCSGC 2 cut(s) 159, 857
TfiI GAWTC 3 cut(s) 313, 332, 1317
Tru1I TTAA 8 cut(s) 278, 611, 615, 1185, 1289, 1385, 1413, 1622
Tru9I TTAA 8 cut(s) 278, 611, 615, 1185, 1289, 1385, 1413, 1622
TscAI CASTG 4 cut(s) 733, 770, 1114, 1618
TseFI GTSAC 3 cut(s) 49, 209, 987
TseI GCWGC 7 cut(s) 98, 233, 464, 857, 1067, 1112, 1556
Tsp45I GTSAC 3 cut(s) 49, 209, 987
TspDTI ATGAA 8 cut(s) 318, 435, 1253, 1266, 1281, 1452, 1467, 1656
TspGWI ACGGA 1 cut(s) 197
TspRI CASTG 4 cut(s) 733, 770, 1114, 1618
VpaK11BI GGWCC 3 cut(s) 572, 1026, 1652
VspI ATTAAT 2 cut(s) 278, 1289
XapI RAATTY 2 cut(s) 650, 1371
XbaI TCTAGA 1 cut(s) 1018
XceI RCATGY 5 cut(s) 133, 526, 903, 1171, 1330
XmiI GTMKAC 1 cut(s) 550
XmnI GAANNNNTTC 1 cut(s) 24
XspI CTAG 4 cut(s) 851, 1019, 1241, 1418
ZrmI AGTACT 1 cut(s) 1507
Zsp2I ATGCAT 2 cut(s) 275, 1429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.