Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004054

Physical Location & Seq

Genomic Coordinates Forward (+)

10625583 .. 10634310

Gene Structure 8728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0120600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGTTTTGGCGTATGGCCGGCTTGTCCACGGCGTCTCCGGTGGAGACGATTTTGGACAAGGATAATTTCACATTGGAAGAGCTTCTTGATGAAGATGAGATTATTCAAGAATGCAAAGCTCTTAATGGGCGCCTAATCAATTTCTTGCGAGAAAGAGTCCAGGTGGAGCAACTCATTCGATATATTGTTGAAGAAGCTCCCGAGGATGCTGAAAAGAGGCGAACTTTCAAATTTCCTTTTATTGCGTGTGAGATTTTTACTTGTGAAGTTGATATCATACTCAAAACATTGGTAGAGGATGAGGAGTTGATGAATTTGTTGTTCTCCTTTTTGGAACCAAATCATTCCCATAGCACACTCTTGGCTGGCTACTTCAGTAAGGTTGTTGTTTGCCTGCTGTTGCGTAAGGCAGTTCCTTTTCTGCACTATATTCAGGGTCATCAGGATATTGTCAAGAAGCTAGTTGACCTGATTGGAATAACATCAATCATGGAGGTTTTAATACGTCTGGTTGGTGCTGATGAACATATGTATTCAAACTATATGGAAGCAATGCACTGGATACAAGATACCGATGTGCTAGAGATGATTGTGGACAAGTTCAGCTCTTCAGATTCTCCTGAAGTGCATGCTAATGCAGCGGAGACGCTTTGTGCTATAACTAGGTTTGCTCCACCTGGACTTTCTTCTAAAATCTCCAGCCCAAGTTTCATAGGAAGATTGTTTCGGCATGCTTTGGAGGACTCTCGGCCAAAATCGGTTCTTGTTAACTCTTTGTCAGTGTGTATCTCTTTGTTAGACCCTAGGAGGCTAACTTTGGGAACATATCATATGTATGGACGTCAAATGACTCATGGATCCACAGTTACTGCCAACCCTGAGACTGTTGTCGGCATGTTGGAGAGCCTAGGTGATTTGCTGAAACTCTTGGATGTTTCATCAGTAGACAATACGTTGTTAACTACATATGGCAAGTTACAGCCGCCTCTTGGAAAACATCGCTTAAAGGTTGTAGAGTTCATTTCGGTATTACTTACAGTCGGTAGTGAAGCTGCCGAGAAGGAATTGGTTAGTCTTGGAGCAGTGCAAAGAATTTTAGACTTGTTTTTCAAGTACCCGTATAACAACTTTGTGCATCACCACATAGAGAATATATTAGTGTCATGTTTGGAAAGCAAGAATGCTCCTCTTGTTGAGCATCTTCTTCGCGAATGTGATCTTGTTGGAAAAATACTTCAAGCAGAAAAGAATTCTACATTGTCAGCTGACTCGGACAAGCCAACTATTCCTGCTGAGGGTAGACCCGCACCCAGGATAGGGAATATTGGACATTTAACACGTATATCCAATAAACTCATTCAGCTGGGGAATAACAACAGCGAGATTGAGGCATATCTGCAGGAGAACAGTGAGTGGACTGATTGGCAGACAAATGTTCTATCGAAACGTAATGCACTGGAGAATGTCTATCAGTGGGCATGTGGGCGACCAACAGCCTTGCATGATCGAAATAGGGATAGTGATGATGATGATTACCAAGATAGAGATTATGATGTTGCAGCTCTCGCTAATAACTTGAGCCAGGCTTTTCGATATGGCCTTTACAGCAATGATGATTTAGATGAGGGCCAGGGTTCACTTGAACGAGATGATGAGGATGTATACTTTGATGATGAATCTGCTGAAGTTGTCATATCTTCACTGCGTCTTGGAGATGACCAGGAAAGTGGTTCTCTGTTTACAAATTCCAACTGGTTCGCATTTGAGGACGATAGGGCTTCCAGTGATCGTGCAACTGGATCCCTTACCTCTCCATCTCCTGATACCATGGAGGCTAATGTTACCAATGGTGGTGGTGAGGATAATGTCATTGTTGGTGAAGATGATGACTTGGTTGACACTGCAACATCTTCTCCAGAACCGGGAACAAAACCTGAAGATTCAGAAGTTAGCGTGCCCAACAATTCTACAGAAGTGGGATCCAGTGAAACTGATAAGCCACCGGAGTGGGTTGAATGGAGGGAAACTTCAGATTCTGGGGAACCATCTGATTTCCTACCTAATGGTGAACTTCAAACGGTATCTCCAGATGCAGCGACAAGTTCCCCGTCCTCTGATCCAGCGGTAAGTAAAGATGAAATTGATGCTGGACATCAAGCAGAAATATCAGCTGAGAAAACTTCAAAACCTTCTGAGCTTTCAGAATCTGGAAATGGGAATCCAAGTTCTGATTCAACCACTTCTGACGCTGCAGCAAGTGCTGTTGGAACAAAGGGCACTCAAGAAGCAGCAGCCACTGTAGGGGATAAAAAGGATGACAAGGAAGGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006275 GO:0008150 GO:0009888 GO:0009889 GO:0010087 GO:0010556 GO:0010564 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032502 GO:0032875 GO:0048856 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_10 TPR_16 TPR_2 TPR_3 TPR_7 TPR_8

Protein Analysis

777

Amino Acids

85.69

Weight (kDa)

4.49

Isoelectric Point (pI)

42.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAPS	PF04499	131 - 489	5.2e-64	SIT4 phosphatase-associated protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78800
fragaria_vesca	FvH4_3g18220 FvH4_3g18220
malus_domestica	MD00G1077500.v1.1 MD00G1078000.v1.1 MD03G1178900.v1.1 MD11G1264500.v1.1
prunus_persica	Prupe.4G169100_v2.0.a1 Prupe.4G241400_v2.0.a1 Prupe.4G241400_v2.0.a1 Prupe.4G241400_v2.0.a1 Prupe.5G052700_v2.0.a1 Prupe.5G052700_v2.0.a1 Prupe.5G052700_v2.0.a1 Prupe.5G052700_v2.0.a1 Prupe.5G052700_v2.0.a1 Prupe.5G052700_v2.0.a1
pyrus_communis	pycom11g23280
rosa_chinensis	RchiOBHm_Chr5g0030771
rosa_laevigata	RLG00000033250
rosa_multiflora	Rmu_sc0009742.1_g000012 Rmu_sc0021923.1_g000002
rosa_roxburghii	Rroxscaffold_1G00049550
rosa_rugosa	Rorug05G0120600 Rorug05G0120700
rosa_samantha	Rh1AG151000 Rh1CG142200 Rh5AG212700 Rh5BG212000 Rh5CG235200 Rh5DG216800
rosa_wichuraiana	Rw1G012370 Rw5G019480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	844
AccB1I	GGYRCC	1 cut(s)	129
AccI	GTMKAC	3 cut(s)	945, 1300, 1662
AccII	CGCG	1 cut(s)	1209
AciI	CCGC	4 cut(s)	641, 983, 1305, 2123
AclWI	GGATC	7 cut(s)	852, 865, 1794, 1807, 1974, 1987, 2111
AcoI	YGGCCR	2 cut(s)	15, 749
AcsI	RAATTY	5 cut(s)	230, 313, 1092, 1249, 1744
AcuI	CTGAAG	6 cut(s)	358, 594, 642, 1704, 1956, 2013
AcyI	GRCGYC	3 cut(s)	32, 130, 841
AfaI	GTAC	1 cut(s)	1115
AfiI	CCNNNNNNNGG	7 cut(s)	989, 1295, 1311, 1316, 1317, 1922, 2301
AflIII	ACRYGT	1 cut(s)	1337
AjnI	CCWGG	6 cut(s)	159, 676, 1310, 1581, 1629, 1719
AjuI	GAANNNNNNNTTGG	2 cut(s)	2215, 2247
AleI	CACNNNNGTG	1 cut(s)	2005
AloI	GAACNNNNNNTCC	2 cut(s)	2209, 2241
Alw26I	GTCTC	4 cut(s)	38, 39, 638, 875
AlwI	GGATC	7 cut(s)	852, 865, 1794, 1807, 1974, 1987, 2111
AlwNI	CAGNNNCTG	4 cut(s)	869, 2036, 2207, 2297
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	4 cut(s)	15, 749, 1597, 1627
ApeKI	GCWGC	8 cut(s)	638, 1052, 1559, 2093, 2249, 2252, 2288, 2291
ApoI	RAATTY	5 cut(s)	230, 313, 1092, 1249, 1744
Asp700I	GAANNNNTTC	1 cut(s)	81
AspA2I	CCTAGG	2 cut(s)	803, 907
AspLEI	GCGC	1 cut(s)	132
AspS9I	GGNCC	1 cut(s)	1627
AsuC2I	CCSGG	1 cut(s)	1923
AsuHPI	GGTGA	5 cut(s)	923, 1130, 1868, 1889, 2078
AvaI	CYCGRG	1 cut(s)	200
AvrII	CCTAGG	2 cut(s)	803, 907
BaeGI	GKGCMC	2 cut(s)	1959, 2279
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BamHI	GGATCC	3 cut(s)	857, 1799, 1979
BanI	GGYRCC	1 cut(s)	129
BbvCI	CCTCAGC	1 cut(s)	1293
BbvI	GCAGC	8 cut(s)	650, 1039, 1571, 2105, 2236, 2264, 2300, 2303
BccI	CCATC	2 cut(s)	1822, 2053
BceAI	ACGGC	1 cut(s)	45
BcgI	CGANNNNNNTGC	4 cut(s)	158, 192, 1187, 1221
BciT130I	CCWGG	6 cut(s)	161, 678, 1312, 1583, 1631, 1721
BciVI	GTATCC	1 cut(s)	555
BcnI	CCSGG	1 cut(s)	1923
BcoDI	GTCTC	4 cut(s)	38, 39, 638, 875
BfaI	CTAG	5 cut(s)	461, 581, 663, 804, 908
BfmI	CTRYAG	4 cut(s)	1397, 1968, 2250, 2298
BfoI	RGCGCY	1 cut(s)	133
BfuI	GTATCC	1 cut(s)	555
BisI	GCNGC	9 cut(s)	639, 983, 1053, 1560, 2094, 2250, 2253, 2289, 2292
BlnI	CCTAGG	2 cut(s)	803, 907
BlsI	GCNGC	9 cut(s)	640, 984, 1054, 1561, 2095, 2251, 2254, 2290, 2293
Bme1390I	CCNGG	7 cut(s)	161, 678, 1312, 1583, 1631, 1721, 1923
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	1 cut(s)	1627
BmiI	GGNNCC	6 cut(s)	131, 336, 859, 1801, 1981, 2043
BmrFI	CCNGG	7 cut(s)	161, 678, 1312, 1583, 1631, 1721, 1923
BmsI	GCATC	5 cut(s)	196, 1144, 1207, 2080, 2134
BoxI	GACNNNNGTC	1 cut(s)	887
BpmI	CTGGAG	4 cut(s)	682, 1478, 1899, 2070
Bpu10I	CCTNAGC	1 cut(s)	1293
BpuEI	CTTGAG	2 cut(s)	1597, 2265
BpuMI	CCSGG	1 cut(s)	1923
BsaAI	YACGTR	1 cut(s)	1340
BsaHI	GRCGYC	3 cut(s)	32, 130, 841
BsaJI	CCNNGG	7 cut(s)	27, 201, 803, 907, 1310, 1630, 1827
BsaWI	WCCGGW	2 cut(s)	37, 2002
BsaXI	ACNNNNNCTCC	6 cut(s)	19, 49, 1897, 1927, 2068, 2098
Bsc4I	CCNNNNNNNGG	7 cut(s)	989, 1295, 1311, 1316, 1317, 1922, 2301
Bse118I	RCCGGY	1 cut(s)	17
Bse1I	ACTGG	6 cut(s)	563, 1461, 1757, 1782, 1801, 1983
Bse3DI	GCAATG	2 cut(s)	558, 1615
BseBI	CCWGG	6 cut(s)	161, 678, 1312, 1583, 1631, 1721
BseDI	CCNNGG	7 cut(s)	27, 201, 803, 907, 1310, 1630, 1827
BseGI	GGATG	5 cut(s)	211, 304, 937, 1663, 2320
BseLI	CCNNNNNNNGG	7 cut(s)	989, 1295, 1311, 1316, 1317, 1922, 2301
BseMI	GCAATG	2 cut(s)	558, 1615
BseMII	CTCAG	4 cut(s)	870, 1284, 2163, 2184
BseNI	ACTGG	6 cut(s)	563, 1461, 1757, 1782, 1801, 1983
BseRI	GAGGAG	2 cut(s)	317, 1176
BseSI	GKGCMC	2 cut(s)	1959, 2279
BseXI	GCAGC	8 cut(s)	650, 1039, 1571, 2105, 2236, 2264, 2300, 2303
BseYI	CCCAGC	1 cut(s)	1363
BsgI	GTGCAG	1 cut(s)	407
Bsh1236I	CGCG	1 cut(s)	1209
BshFI	GGCC	4 cut(s)	17, 751, 1599, 1629
BshNI	GGYRCC	1 cut(s)	129
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	4 cut(s)	18, 38, 1922, 2003
BslI	CCNNNNNNNGG	7 cut(s)	989, 1295, 1311, 1316, 1317, 1922, 2301
BsmAI	GTCTC	4 cut(s)	38, 39, 638, 875
BsmBI	CGTCTC	3 cut(s)	38, 39, 638
BsmI	GAATGC	2 cut(s)	116, 1186
BsnI	GGCC	4 cut(s)	17, 751, 1599, 1629
BsoBI	CYCGRG	1 cut(s)	200
Bsp1286I	GDGCHC	2 cut(s)	1959, 2279
Bsp143I	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
Bsp19I	CCATGG	1 cut(s)	1827
Bsp68I	TCGCGA	1 cut(s)	1209
BspACI	CCGC	4 cut(s)	641, 983, 1305, 2123
BspANI	GGCC	4 cut(s)	17, 751, 1599, 1629
BspCNI	CTCAG	4 cut(s)	871, 1285, 2164, 2185
BspFNI	CGCG	1 cut(s)	1209
BspLI	GGNNCC	6 cut(s)	131, 336, 859, 1801, 1981, 2043
BspMAI	CTGCAG	2 cut(s)	1401, 2254
BspPI	GGATC	7 cut(s)	852, 865, 1794, 1807, 1974, 1987, 2111
BspQI	GCTCTTC	2 cut(s)	72, 613
BspT107I	GGYRCC	1 cut(s)	129
BsrDI	GCAATG	2 cut(s)	558, 1615
BsrFI	RCCGGY	1 cut(s)	17
BsrI	ACTGG	6 cut(s)	563, 1461, 1757, 1782, 1801, 1983
BssAI	RCCGGY	1 cut(s)	17
BssECI	CCNNGG	7 cut(s)	27, 201, 803, 907, 1310, 1630, 1827
BssMI	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
BssNAI	GTATAC	1 cut(s)	1663
BssNI	GRCGYC	3 cut(s)	32, 130, 841
BssT1I	CCWWGG	3 cut(s)	803, 907, 1827
Bst1107I	GTATAC	1 cut(s)	1663
Bst2UI	CCWGG	6 cut(s)	161, 678, 1312, 1583, 1631, 1721
Bst4CI	ACNGT	6 cut(s)	865, 886, 1039, 1409, 2080, 2299
Bst6I	CTCTTC	2 cut(s)	72, 613
BstACI	GRCGYC	3 cut(s)	32, 130, 841
BstAPI	GCANNNNNTGC	1 cut(s)	2258
BstBAI	YACGTR	1 cut(s)	1340
BstC8I	GCNNGC	6 cut(s)	19, 367, 395, 630, 732, 1955
BstDEI	CTNAG	4 cut(s)	879, 1293, 2172, 2193
BstDSI	CCRYGG	2 cut(s)	27, 1827
BstF5I	GGATG	5 cut(s)	211, 304, 937, 1663, 2320
BstFNI	CGCG	1 cut(s)	1209
BstH2I	RGCGCY	1 cut(s)	133
BstHHI	GCGC	1 cut(s)	132
BstKTI	GATC	7 cut(s)	860, 1219, 1507, 1789, 1802, 1982, 2119
BstMAI	GTCTC	4 cut(s)	38, 39, 638, 875
BstMBI	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
BstMWI	GCNNNNNNNGC	4 cut(s)	638, 1565, 1605, 2258
BstNI	CCWGG	6 cut(s)	161, 678, 1312, 1583, 1631, 1721
BstNSI	RCATGY	4 cut(s)	632, 734, 898, 1482
BstPAI	GACNNNNGTC	1 cut(s)	887
BstSCI	CCNGG	7 cut(s)	159, 676, 1310, 1581, 1629, 1719, 1921
BstSFI	CTRYAG	4 cut(s)	1397, 1968, 2250, 2298
BstSLI	GKGCMC	2 cut(s)	1959, 2279
BstUI	CGCG	1 cut(s)	1209
BstV1I	GCAGC	8 cut(s)	650, 1039, 1571, 2105, 2236, 2264, 2300, 2303
BstX2I	RGATCY	3 cut(s)	857, 1799, 1979
BstXI	CCANNNNNNTGG	2 cut(s)	1727, 2007
BstYI	RGATCY	3 cut(s)	857, 1799, 1979
BstZ17I	GTATAC	1 cut(s)	1663
BsuI	GTATCC	1 cut(s)	555
BsuRI	GGCC	4 cut(s)	17, 751, 1599, 1629
BtgI	CCRYGG	2 cut(s)	27, 1827
BtgZI	GCGATG	1 cut(s)	983
BtsCI	GGATG	5 cut(s)	211, 304, 937, 1663, 2320
BtsI	GCAGTG	3 cut(s)	1089, 1700, 1899
BtuMI	TCGCGA	1 cut(s)	1209
Cac8I	GCNNGC	6 cut(s)	19, 367, 395, 630, 732, 1955
CaiI	CAGNNNCTG	4 cut(s)	869, 2036, 2207, 2297
CfoI	GCGC	1 cut(s)	132
Cfr10I	RCCGGY	1 cut(s)	17
Cfr13I	GGNCC	1 cut(s)	1627
CseI	GACGC	4 cut(s)	21, 655, 1694, 2255
Csp6I	GTAC	1 cut(s)	1114
CspCI	CAANNNNNGTGG	2 cut(s)	1834, 1869
CviAII	CATG	9 cut(s)	490, 629, 731, 854, 895, 1164, 1479, 1502, 1828
CviQI	GTAC	1 cut(s)	1114
DdeI	CTNAG	4 cut(s)	879, 1293, 2172, 2193
DinI	GGCGCC	1 cut(s)	131
DpnI	GATC	7 cut(s)	859, 1218, 1506, 1788, 1801, 1981, 2118
DpnII	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
EaeI	YGGCCR	2 cut(s)	15, 749
Eam1104I	CTCTTC	2 cut(s)	72, 613
EarI	CTCTTC	2 cut(s)	72, 613
Eco130I	CCWWGG	3 cut(s)	803, 907, 1827
Eco32I	GATATC	1 cut(s)	274
Eco57I	CTGAAG	6 cut(s)	358, 594, 642, 1704, 1956, 2013
Eco88I	CYCGRG	1 cut(s)	200
EcoRI	GAATTC	1 cut(s)	1249
EcoRII	CCWGG	6 cut(s)	159, 676, 1310, 1581, 1629, 1719
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	3 cut(s)	803, 907, 1827
EgeI	GGCGCC	1 cut(s)	131
EheI	GGCGCC	1 cut(s)	131
ErhI	CCWWGG	3 cut(s)	803, 907, 1827
Esp3I	CGTCTC	3 cut(s)	38, 39, 638
FaeI	CATG	9 cut(s)	493, 632, 734, 857, 898, 1167, 1482, 1505, 1831
FalI	AAGNNNNNCTT	2 cut(s)	69, 101
FatI	CATG	9 cut(s)	489, 628, 730, 853, 894, 1163, 1478, 1501, 1827
FauI	CCCGC	1 cut(s)	1312
FauNDI	CATATG	3 cut(s)	528, 831, 967
FblI	GTMKAC	3 cut(s)	945, 1300, 1662
Fnu4HI	GCNGC	9 cut(s)	639, 983, 1053, 1560, 2094, 2250, 2253, 2289, 2292
FokI	GGATG	5 cut(s)	218, 311, 944, 1670, 2327
Fsp4HI	GCNGC	9 cut(s)	639, 983, 1053, 1560, 2094, 2250, 2253, 2289, 2292
FspBI	CTAG	5 cut(s)	461, 581, 663, 804, 908
GlaI	GCGC	1 cut(s)	131
GluI	GCNGC	9 cut(s)	639, 983, 1053, 1560, 2094, 2250, 2253, 2289, 2292
GsaI	CCCAGC	1 cut(s)	1367
GsuI	CTGGAG	4 cut(s)	682, 1478, 1899, 2070
HaeII	RGCGCY	1 cut(s)	133
HaeIII	GGCC	4 cut(s)	17, 751, 1599, 1629
HapII	CCGG	4 cut(s)	18, 38, 1922, 2003
HgaI	GACGC	4 cut(s)	21, 655, 1694, 2255
HhaI	GCGC	1 cut(s)	132
Hin1I	GRCGYC	3 cut(s)	32, 130, 841
Hin1II	CATG	9 cut(s)	493, 632, 734, 857, 898, 1167, 1482, 1505, 1831
Hin6I	GCGC	1 cut(s)	130
HinP1I	GCGC	1 cut(s)	130
HincII	GTYRAC	4 cut(s)	466, 769, 960, 1897
HindII	GTYRAC	4 cut(s)	466, 769, 960, 1897
HpaI	GTTAAC	2 cut(s)	769, 960
HpaII	CCGG	4 cut(s)	18, 38, 1922, 2003
HphI	GGTGA	5 cut(s)	923, 1130, 1868, 1889, 2078
HpyAV	CCTTC	3 cut(s)	1054, 2199, 2318
HpyCH4III	ACNGT	6 cut(s)	865, 886, 1039, 1409, 2080, 2299
HpyCH4IV	ACGT	5 cut(s)	505, 841, 953, 1339, 1447
HpyF10VI	GCNNNNNNNGC	4 cut(s)	638, 1565, 1605, 2258
HpyF3I	CTNAG	4 cut(s)	879, 1293, 2172, 2193
HpySE526I	ACGT	5 cut(s)	505, 841, 953, 1339, 1447
Hsp92I	GRCGYC	3 cut(s)	32, 130, 841
Hsp92II	CATG	9 cut(s)	493, 632, 734, 857, 898, 1167, 1482, 1505, 1831
HspAI	GCGC	1 cut(s)	130
KasI	GGCGCC	1 cut(s)	129
KroI	GCCGGC	1 cut(s)	17
KroNI	GCCGGC	1 cut(s)	19
KspAI	GTTAAC	2 cut(s)	769, 960
Kzo9I	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
LguI	GCTCTTC	2 cut(s)	72, 613
LmnI	GCTCC	5 cut(s)	166, 202, 676, 1079, 1189
Lsp1109I	GCAGC	8 cut(s)	650, 1039, 1571, 2105, 2236, 2264, 2300, 2303
LweI	GCATC	5 cut(s)	196, 1144, 1207, 2080, 2134
MaeI	CTAG	5 cut(s)	461, 581, 663, 804, 908
MaeII	ACGT	5 cut(s)	505, 841, 953, 1339, 1447
MaeIII	GTNAC	3 cut(s)	865, 975, 1840
MalI	GATC	7 cut(s)	859, 1218, 1506, 1788, 1801, 1981, 2118
MboI	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
MflI	RGATCY	3 cut(s)	857, 1799, 1979
MhlI	GDGCHC	2 cut(s)	1959, 2279
Mly113I	GGCGCC	1 cut(s)	130
MlyI	GAGTC	4 cut(s)	165, 737, 844, 1262
MmeI	TCCRAC	4 cut(s)	879, 1204, 1773, 2245
MroNI	GCCGGC	1 cut(s)	17
MroXI	GAANNNNTTC	1 cut(s)	81
MseI	TTAA	6 cut(s)	123, 500, 768, 959, 1004, 1334
MslI	CAYNNNNRTG	3 cut(s)	633, 834, 2005
MspA1I	CMGCKG	5 cut(s)	641, 1265, 1363, 2123, 2171
MspI	CCGG	4 cut(s)	18, 38, 1922, 2003
MspR9I	CCNGG	7 cut(s)	161, 678, 1312, 1583, 1631, 1721, 1923
Mva1269I	GAATGC	2 cut(s)	116, 1186
MvaI	CCWGG	6 cut(s)	161, 678, 1312, 1583, 1631, 1721
MvnI	CGCG	1 cut(s)	1209
MwoI	GCNNNNNNNGC	4 cut(s)	638, 1565, 1605, 2258
NaeI	GCCGGC	1 cut(s)	19
NarI	GGCGCC	1 cut(s)	130
NciI	CCSGG	1 cut(s)	1923
NcoI	CCATGG	1 cut(s)	1827
NdeI	CATATG	3 cut(s)	528, 831, 967
NdeII	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
NgoMIV	GCCGGC	1 cut(s)	17
NlaIII	CATG	9 cut(s)	493, 632, 734, 857, 898, 1167, 1482, 1505, 1831
NlaIV	GGNNCC	6 cut(s)	131, 336, 859, 1801, 1981, 2043
NmeAIII	GCCGAG	2 cut(s)	727, 1081
NruI	TCGCGA	1 cut(s)	1209
NspI	RCATGY	4 cut(s)	632, 734, 898, 1482
OliI	CACNNNNGTG	1 cut(s)	2005
PaeI	GCATGC	2 cut(s)	632, 734
PciSI	GCTCTTC	2 cut(s)	72, 613
PctI	GAATGC	2 cut(s)	116, 1186
PdiI	GCCGGC	1 cut(s)	19
PdmI	GAANNNNTTC	1 cut(s)	81
PfeI	GAWTC	7 cut(s)	614, 1676, 1940, 2033, 2204, 2218, 2231
PkrI	GCNGC	9 cut(s)	640, 984, 1054, 1561, 2095, 2251, 2254, 2290, 2293
PleI	GAGTC	4 cut(s)	164, 737, 844, 1262
PluTI	GGCGCC	1 cut(s)	133
PpsI	GAGTC	4 cut(s)	164, 737, 844, 1262
Ppu21I	YACGTR	1 cut(s)	1340
PshAI	GACNNNNGTC	1 cut(s)	887
Psp6I	CCWGG	6 cut(s)	159, 676, 1310, 1581, 1629, 1719
PspFI	CCCAGC	1 cut(s)	1363
PspGI	CCWGG	6 cut(s)	159, 676, 1310, 1581, 1629, 1719
PspN4I	GGNNCC	6 cut(s)	131, 336, 859, 1801, 1981, 2043
PspPI	GGNCC	1 cut(s)	1627
PstI	CTGCAG	2 cut(s)	1401, 2254
PstNI	CAGNNNCTG	4 cut(s)	869, 2036, 2207, 2297
PsuI	RGATCY	3 cut(s)	857, 1799, 1979
PvuII	CAGCTG	3 cut(s)	1265, 1363, 2171
RruI	TCGCGA	1 cut(s)	1209
RsaI	GTAC	1 cut(s)	1115
RsaNI	GTAC	1 cut(s)	1114
RseI	CAYNNNNRTG	3 cut(s)	633, 834, 2005
SapI	GCTCTTC	2 cut(s)	72, 613
SaqAI	TTAA	6 cut(s)	123, 500, 768, 959, 1004, 1334
SatI	GCNGC	9 cut(s)	639, 983, 1053, 1560, 2094, 2250, 2253, 2289, 2292
Sau3AI	GATC	7 cut(s)	857, 1216, 1504, 1786, 1799, 1979, 2116
Sau96I	GGNCC	1 cut(s)	1627
SchI	GAGTC	4 cut(s)	165, 737, 844, 1262
ScrFI	CCNGG	7 cut(s)	161, 678, 1312, 1583, 1631, 1721, 1923
SduI	GDGCHC	2 cut(s)	1959, 2279
SfaNI	GCATC	5 cut(s)	196, 1144, 1207, 2080, 2134
SfcI	CTRYAG	4 cut(s)	1397, 1968, 2250, 2298
SfoI	GGCGCC	1 cut(s)	131
SmiMI	CAYNNNNRTG	3 cut(s)	633, 834, 2005
SmlI	CTYRAG	2 cut(s)	1576, 2280
SmoI	CTYRAG	2 cut(s)	1576, 2280
SphI	GCATGC	2 cut(s)	632, 734
SsiI	CCGC	4 cut(s)	641, 983, 1305, 2123
SspDI	GGCGCC	1 cut(s)	129
SspI	AATATT	1 cut(s)	1324
SspMI	CTAG	5 cut(s)	461, 581, 663, 804, 908
StyD4I	CCNGG	7 cut(s)	159, 676, 1310, 1581, 1629, 1719, 1921
StyI	CCWWGG	3 cut(s)	803, 907, 1827
TaaI	ACNGT	6 cut(s)	865, 886, 1039, 1409, 2080, 2299
TaiI	ACGT	5 cut(s)	508, 844, 956, 1342, 1450
TaqI	TCGA	4 cut(s)	178, 1442, 1507, 1591
TauI	GCSGC	1 cut(s)	985
TfiI	GAWTC	7 cut(s)	614, 1676, 1940, 2033, 2204, 2218, 2231
Tru1I	TTAA	6 cut(s)	123, 500, 768, 959, 1004, 1334
Tru9I	TTAA	6 cut(s)	123, 500, 768, 959, 1004, 1334
TseI	GCWGC	8 cut(s)	638, 1052, 1559, 2093, 2249, 2252, 2288, 2291
TspDTI	ATGAA	8 cut(s)	105, 326, 537, 700, 927, 1009, 1689, 2151
XapI	RAATTY	5 cut(s)	230, 313, 1092, 1249, 1744
XceI	RCATGY	4 cut(s)	632, 734, 898, 1482
XmaJI	CCTAGG	2 cut(s)	803, 907
XmiI	GTMKAC	3 cut(s)	945, 1300, 1662
XmnI	GAANNNNTTC	1 cut(s)	81
XspI	CTAG	5 cut(s)	461, 581, 663, 804, 908
ZraI	GACGTC	1 cut(s)	842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.