Rorug05G0120700

Alpha-1,3 1,6-mannosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
10634945 .. 10638882
3938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0120700.1

Sequence Viewer

Length: 1914 bp
ATGGCCGCAGAGATTGTTGATCCAGATGATTATCGTAAGAGATATTTGGAAATTTCTATAGCCCTATTCAATTTGCATGACTCAGCGATCAAATTTGTCAAAAGCCGCATTTCTACACCTCAAGTACTCCCTAACAAAGAAGACCATGACCAGAGAAAGAGACTTGTTGAGGAGATGAAAGAAGCATTTACCAGTTCTGCAAGTTATTTAGAGTTTAACAAATTGAAAGAAGGATTAAAAGGAGTAGAGATGAGCTGTATGCAGTGGATCAAACTCAAAGAGTTTGATGAAGATATAAATGTGGAGGAAATAAAGACTCAATCAGTTAGTCTTGGAACTCGCCTTTCTACGAGTCTTGCCTGTCTTTTATTTATGATGATGTGGGAGGGAAAAAATCAACTGATGGAGAAATTTCAACAGTTAGAGTTTCTATTTTCCTTTATGGCTGCTCTGGAAGATGGTGCTGGTATAGAGGATTCAAATTCTGGTATAGGTGTGGCATATGAGATGATTCTTCCCCTATTCAAAATCGTTGATCAAGAAATGAAGAAGGAAATGAATATTGACATTGATGTCAAAAATAGTACAAGCAGCTGGTATGAATCAGAACAAGAAATTAATAAAGTTCTTGATCAATTTGTACTTGTACTTTCAACGTTGGACACACTTTTGAGCTGTCCAATGCTGGAAGAGCGAATGTTGCAATTGCTGGGAAATGGACTTACAAGGTTGGAGACTCTTGTGAACAAGTTTGAAAGTATGGTGAATGAAATAAAGGGAAAATTCAGCATTAAGAGTACGGGTTTGATGGCAATGGATGCATTTCTTGTGGAACATAACACAGAACAGAGATGGCTGGATTTGATCAAATCGGAGGGCCATTCAGGAGAGAGGCCTGAAAAAAGACAGATGACAGGTGATATCTCTGAAGAAGGAACTTTCAGAGATGCAGAGCAACGCTTGAAGATATGTCGAGCAACATTTGAGGATCAGGTCAAGGCGGTCCTGAAATTTGAGGATTTTAAGGAATCTAACCGCATAGCCTTAGACTTTGGCAAGTTTTATGTTGCTAAAGTGACTTCTATACATTTTTATAGAAAGTCTGATCCTGCAGCACCTGGGAGGCAGGAGTTCCTTTCTGAGATAAGAAATCCTGAATGGCCTTCTTCTGTTTCTAGGCCTTACTTTGAAAGAGTTACAGCAATGCAAGGATATAATGCCACTAGAAATAGAAAGAGTGTAAGGCAATTGCTTGAAGAGCACCAGCCTGTGCCCGGAACAAAATTGGAGAGTCTAAAGGCGTATGCAGTTCATCTTGGGACTCAAATCTCTAAACATCTTGTCAAGCTCATACTGATGCTGAAGTCAGAAGGAATACCAGAAATGGTTCTAAAAATCAAGAACTTTGAGTCTCTGTTTCCTTTTTTACTGGAGTTGTTCACTTGCTCAGGTCCTGCTGGGTATGGAGTGGTTTACAGAAAGATAATTACAATCATAAGCCTAGCAGACCAAGAACTGAAGACGGTTCAAAATTTAAACCAAGGAAACATTATTGCTGATCAAGTTGTTACTAATTGGTATGCAAGCATGACAGAAGCAGAAATCGATGACATTCTCGATGACTTTGCAGAGATTATTGCAACATTGGAGTCTAATCTGAGCTTTCCACTGCTGTTGTTCGGCATAGCTTCTCCCAACTTATTTAGCCTGGAGAAAACCCACTTTTTACCGGTGGAGAACGATCTGAATGGCGTGCATGATATGGAGGGTGTGGATGATGTGGTGGGTATGGAAGAGGTGGTGGAAGGGATGGAGGAATTATACAATGATCAGAAGGATACTCCTACTTTAGTGAGGCAAGTTCTGGAGAAAATGAAAGGGCCCATAGAGCAAGTGTGGGAGGGTTTGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

637

Amino Acids

72.74

Weight (kDa)

4.9

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 572
AciI CCGC 4 cut(s) 6, 106, 1001, 1036
AclI AACGTT 1 cut(s) 656
AclWI GGATC 4 cut(s) 14, 275, 996, 1100
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 7 cut(s) 51, 92, 410, 481, 782, 1010, 1531
AcuI CTGAAG 3 cut(s) 948, 1382, 1538
AfaI GTAC 5 cut(s) 126, 586, 642, 648, 799
AfiI CCNNNNNNNGG 1 cut(s) 1274
AgeI ACCGGT 1 cut(s) 1729
AjnI CCWGG 2 cut(s) 1117, 1707
AluBI AGCT 6 cut(s) 255, 594, 675, 1348, 1662, 1688
AluI AGCT 6 cut(s) 255, 594, 675, 1348, 1662, 1688
Alw21I GWGCWC 1 cut(s) 1263
Alw26I GTCTC 3 cut(s) 154, 728, 1416
AlwI GGATC 4 cut(s) 14, 275, 996, 1100
AlwNI CAGNNNCTG 2 cut(s) 1118, 1454
AoxI GGCC 6 cut(s) 3, 877, 893, 1160, 1178, 1880
ApaI GGGCCC 1 cut(s) 1884
ApeKI GCWGC 3 cut(s) 446, 591, 1112
ApoI RAATTY 7 cut(s) 51, 92, 410, 481, 782, 1010, 1531
AseI ATTAAT 1 cut(s) 618
AsiGI ACCGGT 1 cut(s) 1729
Asp700I GAANNNNTTC 1 cut(s) 1386
AspS9I GGNCC 5 cut(s) 877, 1003, 1451, 1880, 1881
AsuC2I CCSGG 1 cut(s) 1275
AsuHPI GGTGA 2 cut(s) 775, 929
AvaII GGWCC 2 cut(s) 1003, 1451
BaeGI GKGCMC 2 cut(s) 1275, 1884
BanII GRGCYC 1 cut(s) 1884
BbsI GAAGAC 2 cut(s) 147, 1526
Bbv12I GWGCWC 1 cut(s) 1263
BbvI GCAGC 3 cut(s) 433, 603, 1124
BccI CCATC 5 cut(s) 397, 452, 802, 846, 1804
BcgI CGANNNNNNTGC 2 cut(s) 1607, 1641
BciT130I CCWGG 2 cut(s) 1119, 1709
BciVI GTATCC 1 cut(s) 1831
BclI TGATCA 5 cut(s) 535, 631, 864, 1558, 1828
BcnI CCSGG 1 cut(s) 1275
BcoDI GTCTC 3 cut(s) 154, 728, 1416
BfaI CTAG 3 cut(s) 1176, 1224, 1502
BfmI CTRYAG 2 cut(s) 57, 1110
BfuI GTATCC 1 cut(s) 1831
BisI GCNGC 5 cut(s) 6, 106, 447, 592, 1113
BlsI GCNGC 5 cut(s) 7, 107, 448, 593, 1114
BmcAI AGTACT 1 cut(s) 126
Bme1390I CCNGG 3 cut(s) 1119, 1275, 1709
Bme18I GGWCC 2 cut(s) 1003, 1451
BmgT120I GGNCC 5 cut(s) 877, 1003, 1451, 1880, 1881
BmiI GGNNCC 1 cut(s) 1882
BmrFI CCNGG 3 cut(s) 1119, 1275, 1709
BmsI GCATC 3 cut(s) 808, 937, 1347
BpiI GAAGAC 2 cut(s) 147, 1526
BpmI CTGGAG 3 cut(s) 1451, 1730, 1886
Bpu10I CCTNAGC 1 cut(s) 1447
BpuEI CTTGAG 1 cut(s) 105
BpuMI CCSGG 1 cut(s) 1275
Bsa29I ATCGAT 1 cut(s) 1605
BsaBI GATNNNNATC 1 cut(s) 30
BsaJI CCNNGG 2 cut(s) 1118, 1540
BsaWI WCCGGW 1 cut(s) 1729
Bsc4I CCNNNNNNNGG 1 cut(s) 1274
Bse118I RCCGGY 1 cut(s) 1729
Bse1I ACTGG 2 cut(s) 192, 1434
Bse3DI GCAATG 2 cut(s) 819, 1209
Bse8I GATNNNNATC 1 cut(s) 30
BseBI CCWGG 2 cut(s) 1119, 1709
BseCI ATCGAT 1 cut(s) 1605
BseDI CCNNGG 2 cut(s) 1118, 1540
BseGI GGATG 3 cut(s) 823, 1780, 1815
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 1 cut(s) 1274
BseMI GCAATG 2 cut(s) 819, 1209
BseMII CTCAG 4 cut(s) 96, 1131, 1461, 1649
BseNI ACTGG 2 cut(s) 192, 1434
BseRI GAGGAG 1 cut(s) 185
BseSI GKGCMC 2 cut(s) 1275, 1884
BseXI GCAGC 3 cut(s) 433, 603, 1124
BseYI CCCAGC 2 cut(s) 709, 1457
BshFI GGCC 6 cut(s) 5, 879, 895, 1162, 1180, 1882
BshTI ACCGGT 1 cut(s) 1729
BshVI ATCGAT 1 cut(s) 1605
BsiHKAI GWGCWC 1 cut(s) 1263
BsiSI CCGG 2 cut(s) 1275, 1730
BslFI GGGAC 1 cut(s) 1333
BslI CCNNNNNNNGG 1 cut(s) 1274
BsmAI GTCTC 3 cut(s) 154, 728, 1416
BsmFI GGGAC 1 cut(s) 1333
BsnI GGCC 6 cut(s) 5, 879, 895, 1162, 1180, 1882
Bsp120I GGGCCC 1 cut(s) 1880
Bsp1286I GDGCHC 3 cut(s) 1263, 1275, 1884
BspACI CCGC 4 cut(s) 6, 106, 1001, 1036
BspANI GGCC 6 cut(s) 5, 879, 895, 1162, 1180, 1882
BspCNI CTCAG 4 cut(s) 95, 1132, 1460, 1650
BspDI ATCGAT 1 cut(s) 1605
BspLI GGNNCC 1 cut(s) 1882
BspMAI CTGCAG 1 cut(s) 1114
BspPI GGATC 4 cut(s) 14, 275, 996, 1100
BspQI GCTCTTC 2 cut(s) 684, 1251
BsrDI GCAATG 2 cut(s) 819, 1209
BsrFI RCCGGY 1 cut(s) 1729
BsrI ACTGG 2 cut(s) 192, 1434
BssAI RCCGGY 1 cut(s) 1729
BssECI CCNNGG 2 cut(s) 1118, 1540
BssT1I CCWWGG 1 cut(s) 1540
Bst2UI CCWGG 2 cut(s) 1119, 1709
Bst4CI ACNGT 2 cut(s) 420, 1525
Bst6I CTCTTC 3 cut(s) 684, 1251, 1788
BstAPI GCANNNNNTGC 1 cut(s) 818
BstC8I GCNNGC 2 cut(s) 1585, 1754
BstDEI CTNAG 5 cut(s) 82, 1045, 1140, 1447, 1658
BstF5I GGATG 3 cut(s) 823, 1780, 1815
BstMAI GTCTC 3 cut(s) 154, 728, 1416
BstMWI GCNNNNNNNGC 5 cut(s) 691, 700, 818, 1258, 1888
BstNI CCWGG 2 cut(s) 1119, 1709
BstSCI CCNGG 3 cut(s) 1117, 1273, 1707
BstSFI CTRYAG 2 cut(s) 57, 1110
BstSLI GKGCMC 2 cut(s) 1275, 1884
BstV1I GCAGC 3 cut(s) 433, 603, 1124
BstV2I GAAGAC 2 cut(s) 147, 1526
Bsu15I ATCGAT 1 cut(s) 1605
BsuI GTATCC 1 cut(s) 1831
BsuRI GGCC 6 cut(s) 5, 879, 895, 1162, 1180, 1882
BsuTUI ATCGAT 1 cut(s) 1605
BtsCI GGATG 3 cut(s) 823, 1780, 1815
BtsI GCAGTG 2 cut(s) 269, 1667
BtsIMutI CAGTG 2 cut(s) 269, 1667
Cac8I GCNNGC 2 cut(s) 1585, 1754
CaiI CAGNNNCTG 2 cut(s) 1118, 1454
Cfr10I RCCGGY 1 cut(s) 1729
Cfr13I GGNCC 5 cut(s) 877, 1003, 1451, 1880, 1881
ClaI ATCGAT 1 cut(s) 1605
Csp6I GTAC 5 cut(s) 125, 585, 641, 647, 798
CspAI ACCGGT 1 cut(s) 1729
CspCI CAANNNNNGTGG 2 cut(s) 1656, 1691
CviAII CATG 5 cut(s) 77, 146, 1588, 1757, 1911
CviQI GTAC 5 cut(s) 125, 585, 641, 647, 798
DdeI CTNAG 5 cut(s) 82, 1045, 1140, 1447, 1658
DraI TTTAAA 1 cut(s) 1536
DrdI GACNNNNNNGTC 1 cut(s) 572
DseDI GACNNNNNNGTC 1 cut(s) 572
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 684, 1251, 1788
EarI CTCTTC 3 cut(s) 684, 1251, 1788
Eco130I CCWWGG 1 cut(s) 1540
Eco147I AGGCCT 2 cut(s) 895, 1180
Eco24I GRGCYC 1 cut(s) 1884
Eco32I GATATC 1 cut(s) 922
Eco47I GGWCC 2 cut(s) 1003, 1451
Eco57I CTGAAG 3 cut(s) 948, 1382, 1538
EcoO109I RGGNCCY 2 cut(s) 1451, 1880
EcoRII CCWGG 2 cut(s) 1117, 1707
EcoRV GATATC 1 cut(s) 922
EcoT14I CCWWGG 1 cut(s) 1540
EcoT22I ATGCAT 1 cut(s) 823
EcoT38I GRGCYC 1 cut(s) 1884
ErhI CCWWGG 1 cut(s) 1540
FaeI CATG 5 cut(s) 80, 149, 1591, 1760, 1914
FaqI GGGAC 1 cut(s) 1333
FatI CATG 5 cut(s) 76, 145, 1587, 1756, 1910
FauNDI CATATG 1 cut(s) 502
FbaI TGATCA 5 cut(s) 535, 631, 864, 1558, 1828
Fnu4HI GCNGC 5 cut(s) 6, 106, 447, 592, 1113
FokI GGATG 3 cut(s) 830, 1787, 1822
FriOI GRGCYC 1 cut(s) 1884
Fsp4HI GCNGC 5 cut(s) 6, 106, 447, 592, 1113
FspBI CTAG 3 cut(s) 1176, 1224, 1502
GluI GCNGC 5 cut(s) 6, 106, 447, 592, 1113
GsaI CCCAGC 2 cut(s) 713, 1461
GsuI CTGGAG 3 cut(s) 1451, 1730, 1886
HaeIII GGCC 6 cut(s) 5, 879, 895, 1162, 1180, 1882
HapII CCGG 2 cut(s) 1275, 1730
Hin1II CATG 5 cut(s) 80, 149, 1591, 1760, 1914
HpaII CCGG 2 cut(s) 1275, 1730
HphI GGTGA 2 cut(s) 775, 929
Hpy166II GTNNAC 3 cut(s) 745, 1440, 1474
Hpy8I GTNNAC 3 cut(s) 745, 1440, 1474
HpyAV CCTTC 7 cut(s) 224, 544, 926, 1173, 1364, 1799, 1828
HpyCH4III ACNGT 2 cut(s) 420, 1525
HpyCH4IV ACGT 1 cut(s) 656
HpyF10VI GCNNNNNNNGC 5 cut(s) 691, 700, 818, 1258, 1888
HpyF3I CTNAG 5 cut(s) 82, 1045, 1140, 1447, 1658
HpySE526I ACGT 1 cut(s) 656
Hsp92II CATG 5 cut(s) 80, 149, 1591, 1760, 1914
Ksp22I TGATCA 5 cut(s) 535, 631, 864, 1558, 1828
LguI GCTCTTC 2 cut(s) 684, 1251
Lsp1109I GCAGC 3 cut(s) 433, 603, 1124
LweI GCATC 3 cut(s) 808, 937, 1347
MaeI CTAG 3 cut(s) 1176, 1224, 1502
MaeII ACGT 1 cut(s) 656
MaeIII GTNAC 3 cut(s) 1075, 1195, 1567
MfeI CAATTG 2 cut(s) 704, 1247
MhlI GDGCHC 3 cut(s) 1263, 1275, 1884
MlyI GAGTC 8 cut(s) 74, 310, 361, 730, 1300, 1315, 1418, 1658
MmeI TCCRAC 2 cut(s) 639, 711
Mph1103I ATGCAT 1 cut(s) 823
MroXI GAANNNNTTC 1 cut(s) 1386
MseI TTAA 6 cut(s) 216, 236, 618, 792, 1023, 1535
MslI CAYNNNNRTG 1 cut(s) 1355
MspA1I CMGCKG 1 cut(s) 594
MspI CCGG 2 cut(s) 1275, 1730
MspR9I CCNGG 3 cut(s) 1119, 1275, 1709
MunI CAATTG 2 cut(s) 704, 1247
MvaI CCWGG 2 cut(s) 1119, 1709
MwoI GCNNNNNNNGC 5 cut(s) 691, 700, 818, 1258, 1888
NciI CCSGG 1 cut(s) 1275
NdeI CATATG 1 cut(s) 502
NlaIII CATG 5 cut(s) 80, 149, 1591, 1760, 1914
NlaIV GGNNCC 1 cut(s) 1882
NmuCI GTSAC 1 cut(s) 1075
NsiI ATGCAT 1 cut(s) 823
PceI AGGCCT 2 cut(s) 895, 1180
PciSI GCTCTTC 2 cut(s) 684, 1251
PdmI GAANNNNTTC 1 cut(s) 1386
PfeI GAWTC 4 cut(s) 476, 511, 602, 1028
PinAI ACCGGT 1 cut(s) 1729
PkrI GCNGC 5 cut(s) 7, 107, 448, 593, 1114
PleI GAGTC 8 cut(s) 74, 310, 360, 730, 1299, 1315, 1417, 1657
PpsI GAGTC 8 cut(s) 74, 310, 360, 730, 1299, 1315, 1417, 1657
PpuMI RGGWCCY 1 cut(s) 1451
PshBI ATTAAT 1 cut(s) 618
Psp1406I AACGTT 1 cut(s) 656
Psp5II RGGWCCY 1 cut(s) 1451
Psp6I CCWGG 2 cut(s) 1117, 1707
PspFI CCCAGC 2 cut(s) 709, 1457
PspGI CCWGG 2 cut(s) 1117, 1707
PspN4I GGNNCC 1 cut(s) 1882
PspOMI GGGCCC 1 cut(s) 1880
PspPI GGNCC 5 cut(s) 877, 1003, 1451, 1880, 1881
PspPPI RGGWCCY 1 cut(s) 1451
PstI CTGCAG 1 cut(s) 1114
PstNI CAGNNNCTG 2 cut(s) 1118, 1454
PvuII CAGCTG 1 cut(s) 594
RsaI GTAC 5 cut(s) 126, 586, 642, 648, 799
RsaNI GTAC 5 cut(s) 125, 585, 641, 647, 798
RseI CAYNNNNRTG 1 cut(s) 1355
SapI GCTCTTC 2 cut(s) 684, 1251
SaqAI TTAA 6 cut(s) 216, 236, 618, 792, 1023, 1535
SatI GCNGC 5 cut(s) 6, 106, 447, 592, 1113
Sau96I GGNCC 5 cut(s) 877, 1003, 1451, 1880, 1881
ScaI AGTACT 1 cut(s) 126
SchI GAGTC 8 cut(s) 74, 310, 361, 730, 1300, 1315, 1418, 1658
ScrFI CCNGG 3 cut(s) 1119, 1275, 1709
SduI GDGCHC 3 cut(s) 1263, 1275, 1884
SfaNI GCATC 3 cut(s) 808, 937, 1347
SfcI CTRYAG 2 cut(s) 57, 1110
SinI GGWCC 2 cut(s) 1003, 1451
SmiMI CAYNNNNRTG 1 cut(s) 1355
SmlI CTYRAG 1 cut(s) 120
SmoI CTYRAG 1 cut(s) 120
SseBI AGGCCT 2 cut(s) 895, 1180
SsiI CCGC 4 cut(s) 6, 106, 1001, 1036
SspI AATATT 1 cut(s) 562
SspMI CTAG 3 cut(s) 1176, 1224, 1502
StuI AGGCCT 2 cut(s) 895, 1180
StyD4I CCNGG 3 cut(s) 1117, 1273, 1707
StyI CCWWGG 1 cut(s) 1540
TaaI ACNGT 2 cut(s) 420, 1525
TaiI ACGT 1 cut(s) 659
TaqI TCGA 3 cut(s) 973, 1605, 1617
TatI WGTACW 4 cut(s) 124, 584, 640, 646
TauI GCSGC 2 cut(s) 8, 108
TfiI GAWTC 4 cut(s) 476, 511, 602, 1028
Tru1I TTAA 6 cut(s) 216, 236, 618, 792, 1023, 1535
Tru9I TTAA 6 cut(s) 216, 236, 618, 792, 1023, 1535
TscAI CASTG 2 cut(s) 269, 1674
TseFI GTSAC 1 cut(s) 1075
TseI GCWGC 3 cut(s) 446, 591, 1112
Tsp45I GTSAC 1 cut(s) 1075
TspDTI ATGAA 8 cut(s) 191, 303, 560, 572, 615, 783, 1301, 1889
TspRI CASTG 2 cut(s) 269, 1674
VpaK11BI GGWCC 2 cut(s) 1003, 1451
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 7 cut(s) 51, 92, 410, 481, 782, 1010, 1531
XmnI GAANNNNTTC 1 cut(s) 1386
XspI CTAG 3 cut(s) 1176, 1224, 1502
ZrmI AGTACT 1 cut(s) 126
Zsp2I ATGCAT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.