Rorug05G0259700

May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
29192781 .. 29206254
13474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0259700.1

Sequence Viewer

Length: 2100 bp
ATGAAGAAAGATGACAGCTGCATCATGCAACTCATTAATGCCAAGGGCGAATTCAATGCTTCCGGGCTCGACAACTTTGTCAAGGAAGTGAAGCTTGATAGTTGCGGGGTCTTCTATAACATAGTTTCCATTATGGGCCCTCAAGGCGGCGGGAAGAGCACTTTACTGAACCAACTTTTCGGCACGAAGTTCAGGGTAATGGACTCACATAGGAGGACACAAACAACAAAGGGCGTTTGGATTGCCAAATGTGTTGGAATTAAGGATTGCACGGTTGCCATGGATTTGGAGGGTACCGATAGCGAGGAGAGAGGCCAGGATGATACTTCTTTCGAGAAACAAGTTGTCCTATTTGCGCTGGCAGTTTCTGACATTTTGCTCATAAATATGTGCTACAAAGAAATTGGTCGGGAGCATGCAGCAAACAAACCTTTACTAAGAACAGTATTTCAAGTCATGATGCAGATAAACATCCCCAAACGTAAAAAGACGTTACTGTTTGTTATACGTGATGCTGATACATCAGAGAACCACCGAGTAGCCCTTAAAGATCAATTATTGGACAATATACAGAAGATATGGGCTGAAGTTCAGAAGCATGCGGGGACTCAACTCAATGACATTTTTGTGGTAGAAGTAGTTGCTTTGTCCCATTATCGATATGAAAAGGACACGTTTAACAAGGAGGTTGATGAACTGAGACTTGGAAAAGCGATGTCTATGGCTGGTAATAGAGAGGGTGTCATCCCTGGCGACGCATTCTCTTTCAGTTCACAGAAAATTTGGGAAGAAATAAAAACGAACAAGGAGCTGAATCTTCCTTCTATCAAGGTTCTGGCAGCCAACTTTATGTGTGAAAACATGGCCAAGAAAAAATTCAATCAGTTGATCTCTAGTAAGGATTGGTTGGACCTGGTAGAAGCTGTCAAAAATGGTCCTGTAGAAGGTTCGGGTGAACGTCTCAGCTCAATTCTAGACACCCATCTTTCTGGCTATGACGAGGAGGCCAAGTACTATGACAAAGGTGTGAGGGACTCAAAACGACATGACCTACTGGAGCAAACCGCATTGGATTTTGTGCTCCCGGCATACACTACCATGCTCCGCCGCCTGCATTCTAGAACACTTGAGAATTTTAAAGTAGAACTGAAGCAGTCATTAAACAATTCTGGAGAAGGATCTACTTCATCTGTTAGTACCTGCATCAACTCTTCCATGCAAAAGTTTGACCAAGGATGTAAAGAAACTGCCATGCAACGGGCCAATTGGGATTCTTCAAGCACTCGAAAAAACCTTCAGTTGGAAATTAATGAACATGTTGACTTTCTGAGAAGAGAGCTGATAATCAACTCTAAAGAACAACTTTCTGAATCTATATCTGCAAGTGCTCGGCGCCTACTTGAAGATGGCGGACAAGACACCTGGATCGAAATAAGAAAGCTTTTTAATCATGAGACTGAAGCTGCAGTAAAAAAATTATCAACTGCACTTGCTCGTTTTGAGTTGGACAAAGTAACAATTCACGATAAGGTGCAAGAATTGCGCGTGCATGCAAGAGAAGCGGTGGTGAAACAAGCAAAAAGAGAGGCTGTCGATGTCAAACTTCTGAGCGACATGAAAGAACAGTTTGAAAATTACTTCAAAAAACACAGCGACTCAAATCTTGAATTTTGGAAGGGTAAAGAAAACATTGGAAAAAATGCCATGGATGCCCACAAAAATTGTCTTAAGCTTTTATCGGTTAGGGCTGCCATTCGCTTGGACGCTGAGAAGCCAGATAGTATTGAAAATGCTCTCATTTCTTCTCTAATGGGTGAAAATGGAGAGTCTACAAATTCACTTACCTCAAGTGAATGGTTGGAGTTTTCTTCGGACGATACAATAATTAAACCACCGCACTGTAAGGAGTTGTGGAAGAAGTTCGAAGAACAGACGAAGGAGATTGTCGAGCAAGCTACTTTAGCCTGGGTAAACCACCGTTCGAGGAAGACTGCAAAAGTTGCTAAAGCTGTTGGGAAAATTGCTCTTGAACTGACCGGCGTCACGCTTCAGATGGTTGGGATCCAAGCACACATAGCTGGCATGCTATGGCAAAACTAG

Protein Analysis

699

Amino Acids

79.08

Weight (kDa)

7.0

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
URGCP_GTPase PF25683 40 - 207 1.8e-10 URGCP-like GTPase domain
RHD3_GTPase PF05879 45 - 274 2.8e-76 Root hair defective 3 GTP-binding protein (RHD3) GTPase domain
Sey1_3HB PF20428 318 - 660 7.1e-60 Sey1 three-helix bundle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 77
Acc36I ACCTGC 1 cut(s) 1208
Acc65I GGTACC 1 cut(s) 293
AccB1I GGYRCC 2 cut(s) 293, 1392
AccI GTMKAC 1 cut(s) 1829
AccII CGCG 1 cut(s) 1545
AclWI GGATC 4 cut(s) 1186, 1433, 2056, 2069
AcoI YGGCCR 1 cut(s) 864
AcsI RAATTY 6 cut(s) 50, 780, 875, 1132, 1667, 1834
AcuI CTGAAG 5 cut(s) 606, 1169, 1280, 1479, 2033
AcyI GRCGYC 2 cut(s) 1393, 2040
AfaI GTAC 3 cut(s) 295, 1013, 1198
AfiI CCNNNNNNNGG 4 cut(s) 146, 944, 1257, 1300
AflII CTTAAG 1 cut(s) 1727
AflIII ACRYGT 2 cut(s) 672, 1315
AjnI CCWGG 5 cut(s) 315, 748, 912, 1421, 1964
AjuI GAANNNNNNNTTGG 6 cut(s) 35, 67, 687, 719, 860, 892
Alw21I GWGCWC 3 cut(s) 161, 1083, 1390
Alw26I GTCTC 3 cut(s) 694, 965, 1448
AlwI GGATC 4 cut(s) 1186, 1433, 2056, 2069
AlwNI CAGNNNCTG 1 cut(s) 368
AoxI GGCC 5 cut(s) 136, 313, 864, 1005, 1260
ApaI GGGCCC 1 cut(s) 140
ApeKI GCWGC 5 cut(s) 18, 419, 839, 1463, 1748
ApoI RAATTY 6 cut(s) 50, 780, 875, 1132, 1667, 1834
AseI ATTAAT 2 cut(s) 36, 1308
Asp700I GAANNNNTTC 2 cut(s) 875, 1919
Asp718I GGTACC 1 cut(s) 293
AspLEI GCGC 3 cut(s) 358, 1395, 1545
AspS9I GGNCC 5 cut(s) 136, 137, 910, 935, 1260
AsuC2I CCSGG 2 cut(s) 64, 1085
AsuHPI GGTGA 3 cut(s) 965, 1579, 1826
AsuII TTCGAA 1 cut(s) 1923
AvaII GGWCC 2 cut(s) 910, 935
BaeGI GKGCMC 1 cut(s) 140
BalI TGGCCA 1 cut(s) 866
BamHI GGATCC 1 cut(s) 2061
BanI GGYRCC 2 cut(s) 293, 1392
BanII GRGCYC 2 cut(s) 69, 140
BbsI GAAGAC 2 cut(s) 103, 1994
Bbv12I GWGCWC 3 cut(s) 161, 1083, 1390
BbvI GCAGC 5 cut(s) 5, 431, 851, 1450, 1735
BccI CCATC 3 cut(s) 990, 1400, 2047
BcgI CGANNNNNNTGC 2 cut(s) 38, 72
BciT130I CCWGG 5 cut(s) 317, 750, 914, 1423, 1966
BcnI CCSGG 2 cut(s) 64, 1085
BcoDI GTCTC 3 cut(s) 694, 965, 1448
BfaI CTAG 4 cut(s) 894, 974, 1119, 2098
BfmI CTRYAG 2 cut(s) 939, 1464
BfoI RGCGCY 1 cut(s) 1396
BfrI CTTAAG 1 cut(s) 1727
BfuAI ACCTGC 1 cut(s) 1208
BglI GCCNNNNNGGC 1 cut(s) 144
BisI GCNGC 7 cut(s) 19, 148, 420, 840, 1108, 1464, 1749
BlsI GCNGC 7 cut(s) 20, 149, 421, 841, 1109, 1465, 1750
BmcAI AGTACT 1 cut(s) 1013
Bme1390I CCNGG 7 cut(s) 64, 317, 750, 914, 1085, 1423, 1966
Bme18I GGWCC 2 cut(s) 910, 935
BmgT120I GGNCC 5 cut(s) 136, 137, 910, 935, 1260
BmiI GGNNCC 4 cut(s) 138, 295, 1394, 2063
BmrFI CCNGG 7 cut(s) 64, 317, 750, 914, 1085, 1423, 1966
BmsI GCATC 5 cut(s) 30, 450, 502, 1212, 1699
BoxI GACNNNNGTC 1 cut(s) 2039
BpiI GAAGAC 2 cut(s) 103, 1994
BpmI CTGGAG 2 cut(s) 1076, 1191
Bpu14I TTCGAA 1 cut(s) 1923
BpuEI CTTGAG 3 cut(s) 126, 1148, 1831
BpuMI CCSGG 2 cut(s) 64, 1085
Bsa29I ATCGAT 1 cut(s) 658
BsaAI YACGTR 1 cut(s) 509
BsaBI GATNNNNATC 1 cut(s) 470
BsaHI GRCGYC 2 cut(s) 1393, 2040
BsaJI CCNNGG 6 cut(s) 42, 279, 748, 1231, 1704, 1965
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 4 cut(s) 146, 944, 1257, 1300
Bse118I RCCGGY 1 cut(s) 2036
Bse1I ACTGG 1 cut(s) 1059
Bse8I GATNNNNATC 1 cut(s) 470
BseBI CCWGG 5 cut(s) 317, 750, 914, 1423, 1966
BseCI ATCGAT 1 cut(s) 658
BseDI CCNNGG 6 cut(s) 42, 279, 748, 1231, 1704, 1965
BseGI GGATG 5 cut(s) 325, 471, 744, 1241, 1714
BseJI GATNNNNATC 1 cut(s) 470
BseLI CCNNNNNNNGG 4 cut(s) 146, 944, 1257, 1300
BseMII CTCAG 5 cut(s) 689, 976, 1319, 1598, 1758
BseNI ACTGG 1 cut(s) 1059
BseRI GAGGAG 2 cut(s) 320, 1016
BseSI GKGCMC 1 cut(s) 140
BseXI GCAGC 5 cut(s) 5, 431, 851, 1450, 1735
BsgI GTGCAG 1 cut(s) 1470
Bsh1236I CGCG 1 cut(s) 1545
BshFI GGCC 5 cut(s) 138, 315, 866, 1007, 1262
BshNI GGYRCC 2 cut(s) 293, 1392
BshVI ATCGAT 1 cut(s) 658
BsiHKAI GWGCWC 3 cut(s) 161, 1083, 1390
BsiSI CCGG 3 cut(s) 63, 1085, 2037
BslFI GGGAC 3 cut(s) 619, 634, 1046
BslI CCNNNNNNNGG 4 cut(s) 146, 944, 1257, 1300
BsmAI GTCTC 3 cut(s) 694, 965, 1448
BsmBI CGTCTC 1 cut(s) 965
BsmFI GGGAC 3 cut(s) 619, 634, 1046
BsmI GAATGC 2 cut(s) 758, 1114
BsnI GGCC 5 cut(s) 138, 315, 866, 1007, 1262
Bsp119I TTCGAA 1 cut(s) 1923
Bsp120I GGGCCC 1 cut(s) 136
Bsp1286I GDGCHC 5 cut(s) 69, 140, 161, 1083, 1390
Bsp143I GATC 5 cut(s) 550, 888, 1178, 1425, 2061
Bsp19I CCATGG 2 cut(s) 279, 1704
BspANI GGCC 5 cut(s) 138, 315, 866, 1007, 1262
BspCNI CTCAG 5 cut(s) 690, 975, 1320, 1599, 1759
BspDI ATCGAT 1 cut(s) 658
BspFNI CGCG 1 cut(s) 1545
BspHI TCATGA 2 cut(s) 456, 1450
BspLI GGNNCC 4 cut(s) 138, 295, 1394, 2063
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 1 cut(s) 1208
BspPI GGATC 4 cut(s) 1186, 1433, 2056, 2069
BspQI GCTCTTC 1 cut(s) 149
BspT104I TTCGAA 1 cut(s) 1923
BspT107I GGYRCC 2 cut(s) 293, 1392
BspTI CTTAAG 1 cut(s) 1727
BsrFI RCCGGY 1 cut(s) 2036
BsrI ACTGG 1 cut(s) 1059
BssAI RCCGGY 1 cut(s) 2036
BssECI CCNNGG 6 cut(s) 42, 279, 748, 1231, 1704, 1965
BssMI GATC 5 cut(s) 550, 888, 1178, 1425, 2061
BssNI GRCGYC 2 cut(s) 1393, 2040
BssT1I CCWWGG 4 cut(s) 42, 279, 1231, 1704
Bst2UI CCWGG 5 cut(s) 317, 750, 914, 1423, 1966
Bst4CI ACNGT 6 cut(s) 274, 445, 498, 1626, 1901, 1979
Bst6I CTCTTC 3 cut(s) 149, 1216, 1327
BstACI GRCGYC 2 cut(s) 1393, 2040
BstAFI CTTAAG 1 cut(s) 1727
BstAPI GCANNNNNTGC 2 cut(s) 1540, 2000
BstBAI YACGTR 1 cut(s) 509
BstBI TTCGAA 1 cut(s) 1923
BstC8I GCNNGC 9 cut(s) 360, 417, 600, 1112, 1547, 1551, 1953, 2080, 2084
BstDEI CTNAG 6 cut(s) 437, 698, 962, 1328, 1607, 1767
BstDSI CCRYGG 2 cut(s) 279, 1704
BstENI CCTNNNNNAGG 1 cut(s) 942
BstF5I GGATG 5 cut(s) 325, 471, 744, 1241, 1714
BstFNI CGCG 1 cut(s) 1545
BstH2I RGCGCY 1 cut(s) 1396
BstHHI GCGC 3 cut(s) 358, 1395, 1545
BstKTI GATC 5 cut(s) 553, 891, 1181, 1428, 2064
BstMAI GTCTC 3 cut(s) 694, 965, 1448
BstMBI GATC 5 cut(s) 550, 888, 1178, 1425, 2061
BstMWI GCNNNNNNNGC 8 cut(s) 144, 156, 1540, 1559, 1709, 1961, 2000, 2075
BstNI CCWGG 5 cut(s) 317, 750, 914, 1423, 1966
BstNSI RCATGY 5 cut(s) 419, 602, 1319, 1553, 2086
BstPAI GACNNNNGTC 1 cut(s) 2039
BstSCI CCNGG 7 cut(s) 62, 315, 748, 912, 1083, 1421, 1964
BstSFI CTRYAG 2 cut(s) 939, 1464
BstSLI GKGCMC 1 cut(s) 140
BstUI CGCG 1 cut(s) 1545
BstV1I GCAGC 5 cut(s) 5, 431, 851, 1450, 1735
BstV2I GAAGAC 2 cut(s) 103, 1994
BstX2I RGATCY 2 cut(s) 1178, 2061
BstXI CCANNNNNNTGG 3 cut(s) 286, 989, 1759
BstYI RGATCY 2 cut(s) 1178, 2061
Bsu15I ATCGAT 1 cut(s) 658
BsuRI GGCC 5 cut(s) 138, 315, 866, 1007, 1262
BsuTUI ATCGAT 1 cut(s) 658
BtgI CCRYGG 2 cut(s) 279, 1704
BtgZI GCGATG 1 cut(s) 728
BtsCI GGATG 5 cut(s) 325, 471, 744, 1241, 1714
BtsIMutI CAGTG 1 cut(s) 1897
BveI ACCTGC 1 cut(s) 1208
Cac8I GCNNGC 9 cut(s) 360, 417, 600, 1112, 1547, 1551, 1953, 2080, 2084
CaiI CAGNNNCTG 1 cut(s) 368
CciI TCATGA 2 cut(s) 456, 1450
CfoI GCGC 3 cut(s) 358, 1395, 1545
Cfr10I RCCGGY 1 cut(s) 2036
Cfr13I GGNCC 5 cut(s) 136, 137, 910, 935, 1260
ClaI ATCGAT 1 cut(s) 658
CseI GACGC 3 cut(s) 764, 1772, 2029
CsiI ACCWGGT 1 cut(s) 912
Csp6I GTAC 3 cut(s) 294, 1012, 1197
CspCI CAANNNNNGTGG 2 cut(s) 1703, 1738
CviQI GTAC 3 cut(s) 294, 1012, 1197
DdeI CTNAG 6 cut(s) 437, 698, 962, 1328, 1607, 1767
DinI GGCGCC 1 cut(s) 1394
DpnI GATC 5 cut(s) 552, 890, 1180, 1427, 2063
DpnII GATC 5 cut(s) 550, 888, 1178, 1425, 2061
DraI TTTAAA 1 cut(s) 1138
DrdI GACNNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 77
EaeI YGGCCR 1 cut(s) 864
Eam1104I CTCTTC 3 cut(s) 149, 1216, 1327
EarI CTCTTC 3 cut(s) 149, 1216, 1327
EciI GGCGGA 2 cut(s) 1094, 1425
Eco130I CCWWGG 4 cut(s) 42, 279, 1231, 1704
Eco24I GRGCYC 2 cut(s) 69, 140
Eco47I GGWCC 2 cut(s) 910, 935
Eco57I CTGAAG 5 cut(s) 606, 1169, 1280, 1479, 2033
EcoNI CCTNNNNNAGG 1 cut(s) 942
EcoO109I RGGNCCY 1 cut(s) 137
EcoRI GAATTC 1 cut(s) 50
EcoRII CCWGG 5 cut(s) 315, 748, 912, 1421, 1964
EcoT14I CCWWGG 4 cut(s) 42, 279, 1231, 1704
EcoT38I GRGCYC 2 cut(s) 69, 140
EgeI GGCGCC 1 cut(s) 1394
EheI GGCGCC 1 cut(s) 1394
ErhI CCWWGG 4 cut(s) 42, 279, 1231, 1704
Esp3I CGTCTC 1 cut(s) 965
FalI AAGNNNNNCTT 4 cut(s) 78, 110, 1347, 1379
FaqI GGGAC 3 cut(s) 619, 634, 1046
FauI CCCGC 3 cut(s) 98, 143, 595
FblI GTMKAC 1 cut(s) 1829
Fnu4HI GCNGC 7 cut(s) 19, 148, 420, 840, 1108, 1464, 1749
FokI GGATG 5 cut(s) 332, 458, 731, 1248, 1721
FriOI GRGCYC 2 cut(s) 69, 140
Fsp4HI GCNGC 7 cut(s) 19, 148, 420, 840, 1108, 1464, 1749
FspBI CTAG 4 cut(s) 894, 974, 1119, 2098
GlaI GCGC 3 cut(s) 357, 1394, 1544
GluI GCNGC 7 cut(s) 19, 148, 420, 840, 1108, 1464, 1749
GsuI CTGGAG 2 cut(s) 1076, 1191
HaeII RGCGCY 1 cut(s) 1396
HaeIII GGCC 5 cut(s) 138, 315, 866, 1007, 1262
HapII CCGG 3 cut(s) 63, 1085, 2037
HgaI GACGC 3 cut(s) 764, 1772, 2029
HhaI GCGC 3 cut(s) 358, 1395, 1545
Hin1I GRCGYC 2 cut(s) 1393, 2040
Hin6I GCGC 3 cut(s) 356, 1393, 1543
HinP1I GCGC 3 cut(s) 356, 1393, 1543
HincII GTYRAC 1 cut(s) 1321
HindII GTYRAC 1 cut(s) 1321
HindIII AAGCTT 3 cut(s) 92, 1439, 1730
HinfI GANTC 8 cut(s) 203, 607, 814, 1034, 1271, 1370, 1655, 1826
HpaII CCGG 3 cut(s) 63, 1085, 2037
HphI GGTGA 3 cut(s) 965, 1579, 1826
Hpy166II GTNNAC 5 cut(s) 773, 956, 1321, 1830, 1972
Hpy188I TCNGA 8 cut(s) 370, 526, 594, 1329, 1369, 1608, 1873, 2052
Hpy8I GTNNAC 5 cut(s) 773, 956, 1321, 1830, 1972
Hpy99I CGWCG 1 cut(s) 758
HpyAV CCTTC 6 cut(s) 831, 938, 1169, 1304, 1669, 1930
HpyCH4III ACNGT 6 cut(s) 274, 445, 498, 1626, 1901, 1979
HpyCH4IV ACGT 5 cut(s) 481, 491, 508, 674, 958
HpyF10VI GCNNNNNNNGC 8 cut(s) 144, 156, 1540, 1559, 1709, 1961, 2000, 2075
HpyF3I CTNAG 6 cut(s) 437, 698, 962, 1328, 1607, 1767
HpySE526I ACGT 5 cut(s) 481, 491, 508, 674, 958
Hsp92I GRCGYC 2 cut(s) 1393, 2040
HspAI GCGC 3 cut(s) 356, 1393, 1543
KasI GGCGCC 1 cut(s) 1392
KpnI GGTACC 1 cut(s) 297
Kzo9I GATC 5 cut(s) 550, 888, 1178, 1425, 2061
LguI GCTCTTC 1 cut(s) 149
LmnI GCTCC 5 cut(s) 412, 808, 1057, 1086, 1107
Lsp1109I GCAGC 5 cut(s) 5, 431, 851, 1450, 1735
LweI GCATC 5 cut(s) 30, 450, 502, 1212, 1699
MabI ACCWGGT 1 cut(s) 912
MaeI CTAG 4 cut(s) 894, 974, 1119, 2098
MaeII ACGT 5 cut(s) 481, 491, 508, 674, 958
MaeIII GTNAC 3 cut(s) 492, 1513, 2041
MalI GATC 5 cut(s) 552, 890, 1180, 1427, 2063
MboI GATC 5 cut(s) 550, 888, 1178, 1425, 2061
MfeI CAATTG 1 cut(s) 1264
MflI RGATCY 2 cut(s) 1178, 2061
MhlI GDGCHC 5 cut(s) 69, 140, 161, 1083, 1390
MlsI TGGCCA 1 cut(s) 866
MluNI TGGCCA 1 cut(s) 866
Mly113I GGCGCC 1 cut(s) 1393
MlyI GAGTC 5 cut(s) 197, 601, 1028, 1649, 1835
MmeI TCCRAC 5 cut(s) 235, 888, 1281, 1485, 1839
Mox20I TGGCCA 1 cut(s) 866
MroXI GAANNNNTTC 2 cut(s) 875, 1919
MscI TGGCCA 1 cut(s) 866
MslI CAYNNNNRTG 3 cut(s) 386, 626, 1097
Msp20I TGGCCA 1 cut(s) 866
MspA1I CMGCKG 1 cut(s) 18
MspCI CTTAAG 1 cut(s) 1727
MspI CCGG 3 cut(s) 63, 1085, 2037
MspR9I CCNGG 7 cut(s) 64, 317, 750, 914, 1085, 1423, 1966
MunI CAATTG 1 cut(s) 1264
Mva1269I GAATGC 2 cut(s) 758, 1114
MvaI CCWGG 5 cut(s) 317, 750, 914, 1423, 1966
MvnI CGCG 1 cut(s) 1545
MwoI GCNNNNNNNGC 8 cut(s) 144, 156, 1540, 1559, 1709, 1961, 2000, 2075
NarI GGCGCC 1 cut(s) 1393
NciI CCSGG 2 cut(s) 64, 1085
NcoI CCATGG 2 cut(s) 279, 1704
NdeII GATC 5 cut(s) 550, 888, 1178, 1425, 2061
NlaIV GGNNCC 4 cut(s) 138, 295, 1394, 2063
NmeAIII GCCGAG 1 cut(s) 1369
NmuCI GTSAC 1 cut(s) 2041
NspI RCATGY 5 cut(s) 419, 602, 1319, 1553, 2086
NspV TTCGAA 1 cut(s) 1923
PaeI GCATGC 4 cut(s) 419, 602, 1553, 2086
PagI TCATGA 2 cut(s) 456, 1450
PciI ACATGT 1 cut(s) 1315
PciSI GCTCTTC 1 cut(s) 149
PctI GAATGC 2 cut(s) 758, 1114
PdmI GAANNNNTTC 2 cut(s) 875, 1919
PfeI GAWTC 3 cut(s) 814, 1271, 1370
PkrI GCNGC 7 cut(s) 20, 149, 421, 841, 1109, 1465, 1750
PleI GAGTC 5 cut(s) 197, 601, 1028, 1649, 1834
PluTI GGCGCC 1 cut(s) 1396
PpsI GAGTC 5 cut(s) 197, 601, 1028, 1649, 1834
Ppu21I YACGTR 1 cut(s) 509
PscI ACATGT 1 cut(s) 1315
PshAI GACNNNNGTC 1 cut(s) 2039
PshBI ATTAAT 2 cut(s) 36, 1308
Psp6I CCWGG 5 cut(s) 315, 748, 912, 1421, 1964
PspGI CCWGG 5 cut(s) 315, 748, 912, 1421, 1964
PspN4I GGNNCC 4 cut(s) 138, 295, 1394, 2063
PspOMI GGGCCC 1 cut(s) 136
PspPI GGNCC 5 cut(s) 136, 137, 910, 935, 1260
PstI CTGCAG 1 cut(s) 1468
PstNI CAGNNNCTG 1 cut(s) 368
PsuI RGATCY 2 cut(s) 1178, 2061
PvuII CAGCTG 1 cut(s) 18
RsaI GTAC 3 cut(s) 295, 1013, 1198
RsaNI GTAC 3 cut(s) 294, 1012, 1197
RseI CAYNNNNRTG 3 cut(s) 386, 626, 1097
SapI GCTCTTC 1 cut(s) 149
SatI GCNGC 7 cut(s) 19, 148, 420, 840, 1108, 1464, 1749
Sau3AI GATC 5 cut(s) 550, 888, 1178, 1425, 2061
Sau96I GGNCC 5 cut(s) 136, 137, 910, 935, 1260
ScaI AGTACT 1 cut(s) 1013
SchI GAGTC 5 cut(s) 197, 601, 1028, 1649, 1835
ScrFI CCNGG 7 cut(s) 64, 317, 750, 914, 1085, 1423, 1966
SduI GDGCHC 5 cut(s) 69, 140, 161, 1083, 1390
SexAI ACCWGGT 1 cut(s) 912
SfaNI GCATC 5 cut(s) 30, 450, 502, 1212, 1699
SfcI CTRYAG 2 cut(s) 939, 1464
SfoI GGCGCC 1 cut(s) 1394
SfuI TTCGAA 1 cut(s) 1923
SinI GGWCC 2 cut(s) 910, 935
SmiMI CAYNNNNRTG 3 cut(s) 386, 626, 1097
SmlI CTYRAG 4 cut(s) 141, 1127, 1727, 1846
SmoI CTYRAG 4 cut(s) 141, 1127, 1727, 1846
SphI GCATGC 4 cut(s) 419, 602, 1553, 2086
SspDI GGCGCC 1 cut(s) 1392
SspMI CTAG 4 cut(s) 894, 974, 1119, 2098
StyD4I CCNGG 7 cut(s) 62, 315, 748, 912, 1083, 1421, 1964
StyI CCWWGG 4 cut(s) 42, 279, 1231, 1704
TaaI ACNGT 6 cut(s) 274, 445, 498, 1626, 1901, 1979
TaiI ACGT 5 cut(s) 484, 494, 511, 677, 961
TaqI TCGA 9 cut(s) 69, 333, 658, 1285, 1428, 1593, 1923, 1947, 1982
TatI WGTACW 1 cut(s) 1011
TauI GCSGC 2 cut(s) 150, 1110
TfiI GAWTC 3 cut(s) 814, 1271, 1370
TscAI CASTG 1 cut(s) 1904
TseFI GTSAC 1 cut(s) 2041
TseI GCWGC 5 cut(s) 18, 419, 839, 1463, 1748
Tsp45I GTSAC 1 cut(s) 2041
TspDTI ATGAA 6 cut(s) 17, 678, 708, 1176, 1326, 1631
TspRI CASTG 1 cut(s) 1904
Vha464I CTTAAG 1 cut(s) 1727
VpaK11BI GGWCC 2 cut(s) 910, 935
VspI ATTAAT 2 cut(s) 36, 1308
XagI CCTNNNNNAGG 1 cut(s) 942
XapI RAATTY 6 cut(s) 50, 780, 875, 1132, 1667, 1834
XbaI TCTAGA 2 cut(s) 973, 1118
XceI RCATGY 5 cut(s) 419, 602, 1319, 1553, 2086
XmiI GTMKAC 1 cut(s) 1829
XmnI GAANNNNTTC 2 cut(s) 875, 1919
XspI CTAG 4 cut(s) 894, 974, 1119, 2098
ZrmI AGTACT 1 cut(s) 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.