Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001851

Physical Location & Seq

Genomic Coordinates Forward (+)

72009696 .. 72013385

Gene Structure 3690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0600900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGAACACGAGCCGGAGAAAATGGCGGCGCTGAAGAAGGCGTACGCGGACATGATTCTCAACACGGCGAAGGAAGCGGCGGCGAGAGTAATGGCGGCGGAGCGGAAGGCTCTTCGGTTCGAGCACGATCTGCGTAGTAGTAAAGACGAGGCGCTTCAGATGCTGGTCCGATTGAAGCAGATGATCGATTCCAAGACAAGTGAAGCACAGATTACATCCTTGAAACAAGAAAGAAAGATTGAAGAGCTTGAAGCGCAGCTCTATGAGGCGGAGGATATCATAACTGACCTAAGATCAGAGTTGAAACAAGCATGGGGTGAATTAGAGAGGGTGAATCCCAACCAAGTGCAGCCTTTGAATGGACAAACCATAAGGGAAGATGCCTCATTTTCCGGAAATGTGACACCTGAGCCCATCAAACTCTCTCCTTCAGGTTTAGGGAATGAAGATGCTCCAAGTTCTGGCCTGAAGAACATTCCAGTGATTAGAGGTCTGGACCATGAGGTCTGTAATGGAATAGAACAAACTGAGCAGTTGAGTGTTTGTGATTTGGACAAATTTTATGCCCCTGTCTCTGACTTTGACTCAATAATTATGAGAAGTAAGGAGCCTGAGCTGCTCAGAAATGGATGTACACAGAGAGTTCGCGCGTTTGAAAGAAATTCATTTGATGATAAAGTGCCGCTTTCTGGATATGAGGACAATCAGAAGTCTCAGAGCAAGAATGAGTTAGTCAAAACAAGTGACAATGGCATGGAAGTAGTTAAGAAACCATCTTTAGGAGAAACCAAAACCCCTGTTAAAGTCCGCACAATACGAAGAAGGAAGACTCAATTTGGGAAAGACAAAACCTCACACCAATATTGTCCTAGTCAACTCATGAGATCACGTCAACCTTCTTCAGTCAATGGGAATGACAGATCCCATGAAGATGCGTGTATTGCGCCCTCATTCAATGCCAAAAGTGAGGACATCACGAGAAGTTCCAGTGGGTTGGAAGAGAAATTGTGGCATAGTAGATGCCATCCTATAGATGGTAAGATCATTCAGAAGGGCAAAAGGAAAAGGAAAATGCAAAGTAAGGATGGCATTAGTACCTCATTCACGAGTACTGGACAGCCATCTCCTGTTCTTTCCCGCTGCAGGACTTTCGCATACTTAATCAATGGTGATGTTAAATCATGTGAAGATCGACCAAACACAGCTGAAAAGAATGAAGCTAAGTTGAAGCCGCTGCCCCGACTGGATCCGGGAAGGACATTAATTAGAAGTGATGTGGATCCTATATCAGGTTCAACTAGTGTTAAAGTCAGCATCAAGGGGATCAGTAAATGTGGACCTGTCCAGAATGATCCAGACAAAGGCAGTGAGTTGATTGGCATGCCTGTTTTGATAAAGCAGGGAAAGGATGTTGTGGAGAATTCAGAGGCTCCGAGTTCTGAATTTAGCCTTGGTACTGATATTGTATCAGGGATGAATTCTGAAATAACAGATGTGAAAGTATCAGAACAATCAAGTGAATCTCCTAGTCACGTGGACAACAGTAAACTTCTCAAGTACACTTTCCAGAGGAAGCGCAAGAATTACTCAAGCAACCCTGGTGAAACTGTTTCATTTGAGGAGAACACTTCTAAGAGGAGGGCGGAAGAGAGAGAATCTATTGTACCACAGCCACAGATGACAAATGAATCATCTAGGGACAGTCGGCGGCTGGCCCAGGTTGCTCGACAGCTCATATCATTGTCTGGGAAGAGATGGTACAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

588

Amino Acids

65.79

Weight (kDa)

8.79

Isoelectric Point (pI)

57.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001851)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0070000 Rorug01G0106000 Rorug01G0106000 Rorug01G0247000 Rorug01G0420200 Rorug01G0426300 Rorug01G0456700 Rorug02G0176200 Rorug02G0392200 Rorug02G0570300 Rorug02G0600900 Rorug03G0033500 Rorug03G0098300 Rorug03G0171600 Rorug03G0248300 Rorug03G0273700 Rorug03G0274400 Rorug04G0035800 Rorug04G0042000.1 Rorug04G0067800 Rorug04G0108900 Rorug04G0190500 Rorug04G0237000 Rorug04G0369100 Rorug05G0120700 Rorug05G0202200 Rorug05G0207300 Rorug05G0213800.1 Rorug05G0249100 Rorug05G0259700 Rorug05G0268600 Rorug05G0268700 Rorug05G0268700 Rorug05G0275000 Rorug05G0319500 Rorug05G0342900 Rorug05G0460500 Rorug06G0065200 Rorug06G0068600 Rorug06G0085300 Rorug06G0094800 Rorug06G0114300 Rorug06G0134600 Rorug06G0168500 Rorug06G0359000 Rorug06G0375200 Rorug07G0200500

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0070000 Rorug01G0106000 Rorug01G0106000 Rorug01G0247000 Rorug01G0420200 Rorug01G0426300 Rorug01G0456700 Rorug02G0176200 Rorug02G0392200 Rorug02G0570300 Rorug02G0600900 Rorug03G0033500 Rorug03G0098300 Rorug03G0171600 Rorug03G0248300 Rorug03G0273700 Rorug03G0274400 Rorug04G0035800 Rorug04G0042000.1 Rorug04G0067800 Rorug04G0108900 Rorug04G0190500 Rorug04G0237000 Rorug04G0369100 Rorug05G0120700 Rorug05G0202200 Rorug05G0207300 Rorug05G0213800.1 Rorug05G0249100 Rorug05G0259700 Rorug05G0268600 Rorug05G0268700 Rorug05G0268700 Rorug05G0275000 Rorug05G0319500 Rorug05G0342900 Rorug05G0460500 Rorug06G0065200 Rorug06G0068600 Rorug06G0085300 Rorug06G0094800 Rorug06G0114300 Rorug06G0134600 Rorug06G0168500 Rorug06G0359000 Rorug06G0375200 Rorug07G0200500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	503
AccB7I	CCANNNNNTGG	1 cut(s)	461
AccBSI	CCGCTC	1 cut(s)	103
AccII	CGCG	3 cut(s)	47, 648, 650
AccIII	TCCGGA	1 cut(s)	392
AclWI	GGATC	7 cut(s)	915, 1241, 1254, 1274, 1287, 1331, 1346
AcsI	RAATTY	5 cut(s)	557, 661, 1420, 1442, 1477
AcuI	CTGAAG	5 cut(s)	53, 140, 414, 488, 885
AcvI	CACGTG	1 cut(s)	1534
AfaI	GTAC	8 cut(s)	44, 634, 1096, 1111, 1456, 1559, 1665, 1760
AfiI	CCNNNNNNNGG	8 cut(s)	359, 461, 689, 779, 1034, 1143, 1289, 1361
AhlI	ACTAGT	1 cut(s)	1298
AjiI	CACGTC	1 cut(s)	890
AjnI	CCWGG	2 cut(s)	1597, 1716
AjuI	GAANNNNNNNTTGG	2 cut(s)	1434, 1466
AluBI	AGCT	6 cut(s)	247, 259, 616, 1205, 1220, 1732
AluI	AGCT	6 cut(s)	247, 259, 616, 1205, 1220, 1732
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	2 cut(s)	577, 717
AlwI	GGATC	7 cut(s)	915, 1241, 1254, 1274, 1287, 1331, 1346
AlwNI	CAGNNNCTG	1 cut(s)	163
Aor13HI	TCCGGA	1 cut(s)	392
AoxI	GGCC	2 cut(s)	463, 1713
ApeKI	GCWGC	5 cut(s)	256, 349, 616, 1140, 1234
ApoI	RAATTY	5 cut(s)	557, 661, 1420, 1442, 1477
AseI	ATTAAT	1 cut(s)	1262
AspLEI	GCGC	6 cut(s)	31, 154, 256, 650, 946, 1578
AspS9I	GGNCC	4 cut(s)	166, 496, 1337, 1714
AsuC2I	CCSGG	1 cut(s)	1251
AsuHPI	GGTGA	4 cut(s)	329, 343, 1181, 1613
AvaII	GGWCC	3 cut(s)	166, 496, 1337
BamHI	GGATCC	2 cut(s)	1246, 1279
BanII	GRGCYC	1 cut(s)	414
BarI	GAAGNNNNNNTAC	3 cut(s)	26, 58, 1742
BauI	CACGAG	3 cut(s)	8, 976, 1105
BbrPI	CACGTG	1 cut(s)	1534
BbsI	GAAGAC	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	126
BbvI	GCAGC	5 cut(s)	268, 361, 603, 1127, 1221
BccI	CCATC	7 cut(s)	422, 781, 1028, 1032, 1079, 1129, 1749
BceAI	ACGGC	1 cut(s)	81
BcgI	CGANNNNNNTGC	2 cut(s)	1132, 1166
BciT130I	CCWGG	2 cut(s)	1599, 1718
BcnI	CCSGG	1 cut(s)	1251
BcoDI	GTCTC	2 cut(s)	577, 717
BcuI	ACTAGT	1 cut(s)	1298
BfaI	CTAG	4 cut(s)	870, 1299, 1527, 1695
BfmI	CTRYAG	2 cut(s)	1029, 1141
BfoI	RGCGCY	2 cut(s)	32, 155
BmcAI	AGTACT	1 cut(s)	1111
Bme1390I	CCNGG	3 cut(s)	1251, 1599, 1718
Bme18I	GGWCC	3 cut(s)	166, 496, 1337
BmgBI	CACGTC	1 cut(s)	890
BmgT120I	GGNCC	4 cut(s)	166, 496, 1337, 1714
BmiI	GGNNCC	4 cut(s)	609, 1248, 1281, 1431
BmrFI	CCNGG	3 cut(s)	1251, 1599, 1718
BmsI	GCATC	6 cut(s)	150, 370, 439, 922, 1010, 1323
BpiI	GAAGAC	1 cut(s)	833
Bpu10I	CCTNAGC	2 cut(s)	408, 612
BpuEI	CTTGAG	2 cut(s)	1538, 1573
BpuMI	CCSGG	1 cut(s)	1251
Bsa29I	ATCGAT	1 cut(s)	186
BsaAI	YACGTR	1 cut(s)	1534
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaJI	CCNNGG	3 cut(s)	1450, 1597, 1716
BsaWI	WCCGGW	1 cut(s)	392
Bsc4I	CCNNNNNNNGG	8 cut(s)	359, 461, 689, 779, 1034, 1143, 1289, 1361
Bse1I	ACTGG	4 cut(s)	479, 987, 1117, 1248
Bse8I	GATNNNNATC	1 cut(s)	1278
BseAI	TCCGGA	1 cut(s)	392
BseBI	CCWGG	2 cut(s)	1599, 1718
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	3 cut(s)	1450, 1597, 1716
BseGI	GGATG	6 cut(s)	215, 635, 1024, 1090, 1414, 1479
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	8 cut(s)	359, 461, 689, 779, 1034, 1143, 1289, 1361
BseMII	CTCAG	5 cut(s)	399, 519, 603, 634, 728
BseNI	ACTGG	4 cut(s)	479, 987, 1117, 1248
BseRI	GAGGAG	2 cut(s)	1634, 1651
BseXI	GCAGC	5 cut(s)	268, 361, 603, 1127, 1221
BsgI	GTGCAG	1 cut(s)	368
Bsh1236I	CGCG	3 cut(s)	47, 648, 650
BshFI	GGCC	2 cut(s)	465, 1715
BshVI	ATCGAT	1 cut(s)	186
BsiHKAI	GWGCWC	1 cut(s)	126
BsiSI	CCGG	3 cut(s)	14, 393, 1250
BsiWI	CGTACG	1 cut(s)	42
BslFI	GGGAC	1 cut(s)	1712
BslI	CCNNNNNNNGG	8 cut(s)	359, 461, 689, 779, 1034, 1143, 1289, 1361
BsmAI	GTCTC	2 cut(s)	577, 717
BsmFI	GGGAC	1 cut(s)	1712
BsnI	GGCC	2 cut(s)	465, 1715
Bsp1286I	GDGCHC	2 cut(s)	126, 414
Bsp13I	TCCGGA	1 cut(s)	392
Bsp1407I	TGTACA	1 cut(s)	632
BspANI	GGCC	2 cut(s)	465, 1715
BspCNI	CTCAG	5 cut(s)	400, 520, 604, 633, 727
BspDI	ATCGAT	1 cut(s)	186
BspEI	TCCGGA	1 cut(s)	392
BspFNI	CGCG	3 cut(s)	47, 648, 650
BspHI	TCATGA	1 cut(s)	879
BspLI	GGNNCC	4 cut(s)	609, 1248, 1281, 1431
BspMAI	CTGCAG	1 cut(s)	1145
BspPI	GGATC	7 cut(s)	915, 1241, 1254, 1274, 1287, 1331, 1346
BspQI	GCTCTTC	2 cut(s)	117, 237
BsrBI	CCGCTC	1 cut(s)	103
BsrGI	TGTACA	1 cut(s)	632
BsrI	ACTGG	4 cut(s)	479, 987, 1117, 1248
BssECI	CCNNGG	3 cut(s)	1450, 1597, 1716
BssSI	CACGAG	3 cut(s)	8, 976, 1105
BssT1I	CCWWGG	1 cut(s)	1450
Bst2BI	CACGAG	3 cut(s)	8, 976, 1105
Bst2UI	CCWGG	2 cut(s)	1599, 1718
Bst4CI	ACNGT	3 cut(s)	1544, 1609, 1703
Bst6I	CTCTTC	5 cut(s)	117, 237, 993, 1641, 1745
BstAPI	GCANNNNNTGC	1 cut(s)	130
BstAUI	TGTACA	1 cut(s)	632
BstBAI	YACGTR	1 cut(s)	1534
BstC8I	GCNNGC	2 cut(s)	1382, 1713
BstDEI	CTNAG	8 cut(s)	290, 408, 528, 612, 620, 714, 1221, 1632
BstENI	CCTNNNNNAGG	1 cut(s)	1287
BstF5I	GGATG	6 cut(s)	215, 635, 1024, 1090, 1414, 1479
BstFNI	CGCG	3 cut(s)	47, 648, 650
BstH2I	RGCGCY	2 cut(s)	32, 155
BstHHI	GCGC	6 cut(s)	31, 154, 256, 650, 946, 1578
BstMAI	GTCTC	2 cut(s)	577, 717
BstMWI	GCNNNNNNNGC	7 cut(s)	74, 130, 160, 253, 616, 941, 1721
BstNI	CCWGG	2 cut(s)	1599, 1718
BstNSI	RCATGY	1 cut(s)	1384
BstSCI	CCNGG	3 cut(s)	1249, 1597, 1716
BstSFI	CTRYAG	2 cut(s)	1029, 1141
BstUI	CGCG	3 cut(s)	47, 648, 650
BstV1I	GCAGC	5 cut(s)	268, 361, 603, 1127, 1221
BstV2I	GAAGAC	1 cut(s)	833
BstX2I	RGATCY	3 cut(s)	920, 1246, 1279
BstXI	CCANNNNNNTGG	1 cut(s)	994
BstYI	RGATCY	3 cut(s)	920, 1246, 1279
Bsu15I	ATCGAT	1 cut(s)	186
BsuRI	GGCC	2 cut(s)	465, 1715
BsuTUI	ATCGAT	1 cut(s)	186
BtrI	CACGTC	1 cut(s)	890
BtsCI	GGATG	6 cut(s)	215, 635, 1024, 1090, 1414, 1479
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	3 cut(s)	486, 994, 1372
Cac8I	GCNNGC	2 cut(s)	1382, 1713
CaiI	CAGNNNCTG	1 cut(s)	163
CciI	TCATGA	1 cut(s)	879
CfoI	GCGC	6 cut(s)	31, 154, 256, 650, 946, 1578
Cfr13I	GGNCC	4 cut(s)	166, 496, 1337, 1714
ClaI	ATCGAT	1 cut(s)	186
Csp6I	GTAC	8 cut(s)	43, 633, 1095, 1110, 1455, 1558, 1664, 1759
CviAII	CATG	8 cut(s)	52, 312, 500, 754, 880, 926, 1182, 1381
CviQI	GTAC	8 cut(s)	43, 633, 1095, 1110, 1455, 1558, 1664, 1759
DdeI	CTNAG	8 cut(s)	290, 408, 528, 612, 620, 714, 1221, 1632
DrdI	GACNNNNNNGTC	1 cut(s)	503
DseDI	GACNNNNNNGTC	1 cut(s)	503
Eam1104I	CTCTTC	5 cut(s)	117, 237, 993, 1641, 1745
EarI	CTCTTC	5 cut(s)	117, 237, 993, 1641, 1745
EciI	GGCGGA	3 cut(s)	113, 284, 1658
Eco130I	CCWWGG	1 cut(s)	1450
Eco24I	GRGCYC	1 cut(s)	414
Eco32I	GATATC	1 cut(s)	277
Eco47I	GGWCC	3 cut(s)	166, 496, 1337
Eco57I	CTGAAG	5 cut(s)	53, 140, 414, 488, 885
Eco72I	CACGTG	1 cut(s)	1534
EcoNI	CCTNNNNNAGG	1 cut(s)	1287
EcoRI	GAATTC	2 cut(s)	1420, 1477
EcoRII	CCWGG	2 cut(s)	1597, 1716
EcoRV	GATATC	1 cut(s)	277
EcoT14I	CCWWGG	1 cut(s)	1450
EcoT38I	GRGCYC	1 cut(s)	414
ErhI	CCWWGG	1 cut(s)	1450
FaeI	CATG	8 cut(s)	55, 315, 503, 757, 883, 929, 1185, 1384
FalI	AAGNNNNNCTT	2 cut(s)	669, 701
FaqI	GGGAC	1 cut(s)	1712
FatI	CATG	8 cut(s)	51, 311, 499, 753, 879, 925, 1181, 1380
FauI	CCCGC	1 cut(s)	1145
FokI	GGATG	6 cut(s)	202, 642, 1011, 1097, 1421, 1486
FriOI	GRGCYC	1 cut(s)	414
FspBI	CTAG	4 cut(s)	870, 1299, 1527, 1695
GlaI	GCGC	6 cut(s)	30, 153, 255, 649, 945, 1577
HaeII	RGCGCY	2 cut(s)	32, 155
HaeIII	GGCC	2 cut(s)	465, 1715
HapII	CCGG	3 cut(s)	14, 393, 1250
HhaI	GCGC	6 cut(s)	31, 154, 256, 650, 946, 1578
Hin1II	CATG	8 cut(s)	55, 315, 503, 757, 883, 929, 1185, 1384
Hin6I	GCGC	6 cut(s)	29, 152, 254, 648, 944, 1576
HinP1I	GCGC	6 cut(s)	29, 152, 254, 648, 944, 1576
HincII	GTYRAC	2 cut(s)	875, 893
HindII	GTYRAC	2 cut(s)	875, 893
HinfI	GANTC	8 cut(s)	55, 188, 334, 584, 829, 1520, 1655, 1688
HpaII	CCGG	3 cut(s)	14, 393, 1250
HphI	GGTGA	4 cut(s)	329, 343, 1181, 1613
Hpy166II	GTNNAC	7 cut(s)	635, 875, 893, 1337, 1537, 1547, 1560
Hpy188III	TCNNGA	9 cut(s)	393, 494, 690, 880, 976, 1105, 1345, 1355, 1567
Hpy8I	GTNNAC	7 cut(s)	635, 875, 893, 1337, 1537, 1547, 1560
HpyAV	CCTTC	8 cut(s)	31, 64, 100, 438, 816, 906, 1045, 1248
HpyCH4III	ACNGT	3 cut(s)	1544, 1609, 1703
HpyCH4IV	ACGT	2 cut(s)	889, 1533
HpyCH4V	TGCA	3 cut(s)	349, 1075, 1143
HpyF10VI	GCNNNNNNNGC	7 cut(s)	74, 130, 160, 253, 616, 941, 1721
HpyF3I	CTNAG	8 cut(s)	290, 408, 528, 612, 620, 714, 1221, 1632
HpySE526I	ACGT	2 cut(s)	889, 1533
Hsp92II	CATG	8 cut(s)	55, 315, 503, 757, 883, 929, 1185, 1384
HspAI	GCGC	6 cut(s)	29, 152, 254, 648, 944, 1576
Kpn2I	TCCGGA	1 cut(s)	392
LguI	GCTCTTC	2 cut(s)	117, 237
LmnI	GCTCC	4 cut(s)	100, 457, 607, 1435
Lsp1109I	GCAGC	5 cut(s)	268, 361, 603, 1127, 1221
LweI	GCATC	6 cut(s)	150, 370, 439, 922, 1010, 1323
MaeI	CTAG	4 cut(s)	870, 1299, 1527, 1695
MaeII	ACGT	2 cut(s)	889, 1533
MaeIII	GTNAC	3 cut(s)	400, 743, 1529
MbiI	CCGCTC	1 cut(s)	103
MflI	RGATCY	3 cut(s)	920, 1246, 1279
MhlI	GDGCHC	2 cut(s)	126, 414
MlyI	GAGTC	2 cut(s)	578, 823
MmeI	TCCRAC	1 cut(s)	975
MroI	TCCGGA	1 cut(s)	392
MseI	TTAA	6 cut(s)	765, 801, 1160, 1176, 1262, 1305
MslI	CAYNNNNRTG	2 cut(s)	479, 930
MspA1I	CMGCKG	3 cut(s)	1140, 1205, 1234
MspI	CCGG	3 cut(s)	14, 393, 1250
MspR9I	CCNGG	3 cut(s)	1251, 1599, 1718
MvaI	CCWGG	2 cut(s)	1599, 1718
MvnI	CGCG	3 cut(s)	47, 648, 650
MwoI	GCNNNNNNNGC	7 cut(s)	74, 130, 160, 253, 616, 941, 1721
NciI	CCSGG	1 cut(s)	1251
NlaIII	CATG	8 cut(s)	55, 315, 503, 757, 883, 929, 1185, 1384
NlaIV	GGNNCC	4 cut(s)	609, 1248, 1281, 1431
NmuCI	GTSAC	3 cut(s)	400, 743, 1529
NspI	RCATGY	1 cut(s)	1384
PaeI	GCATGC	1 cut(s)	1384
PagI	TCATGA	1 cut(s)	879
PciSI	GCTCTTC	2 cut(s)	117, 237
PfeI	GAWTC	6 cut(s)	55, 188, 334, 1520, 1655, 1688
Pfl23II	CGTACG	1 cut(s)	42
PflMI	CCANNNNNTGG	1 cut(s)	461
PfoI	TCCNGGA	1 cut(s)	1249
PleI	GAGTC	2 cut(s)	578, 823
PmaCI	CACGTG	1 cut(s)	1534
PmlI	CACGTG	1 cut(s)	1534
PpsI	GAGTC	2 cut(s)	578, 823
Ppu21I	YACGTR	1 cut(s)	1534
PshBI	ATTAAT	1 cut(s)	1262
Psp6I	CCWGG	2 cut(s)	1597, 1716
PspCI	CACGTG	1 cut(s)	1534
PspGI	CCWGG	2 cut(s)	1597, 1716
PspLI	CGTACG	1 cut(s)	42
PspN4I	GGNNCC	4 cut(s)	609, 1248, 1281, 1431
PspPI	GGNCC	4 cut(s)	166, 496, 1337, 1714
PstI	CTGCAG	1 cut(s)	1145
PstNI	CAGNNNCTG	1 cut(s)	163
PsuI	RGATCY	3 cut(s)	920, 1246, 1279
PvuII	CAGCTG	1 cut(s)	1205
RsaI	GTAC	8 cut(s)	44, 634, 1096, 1111, 1456, 1559, 1665, 1760
RsaNI	GTAC	8 cut(s)	43, 633, 1095, 1110, 1455, 1558, 1664, 1759
RseI	CAYNNNNRTG	2 cut(s)	479, 930
SapI	GCTCTTC	2 cut(s)	117, 237
SaqAI	TTAA	6 cut(s)	765, 801, 1160, 1176, 1262, 1305
Sau96I	GGNCC	4 cut(s)	166, 496, 1337, 1714
ScaI	AGTACT	1 cut(s)	1111
SchI	GAGTC	2 cut(s)	578, 823
ScrFI	CCNGG	3 cut(s)	1251, 1599, 1718
SduI	GDGCHC	2 cut(s)	126, 414
SfaNI	GCATC	6 cut(s)	150, 370, 439, 922, 1010, 1323
SfcI	CTRYAG	2 cut(s)	1029, 1141
SinI	GGWCC	3 cut(s)	166, 496, 1337
SmiMI	CAYNNNNRTG	2 cut(s)	479, 930
SmlI	CTYRAG	2 cut(s)	1553, 1588
SmoI	CTYRAG	2 cut(s)	1553, 1588
SpeI	ACTAGT	1 cut(s)	1298
SphI	GCATGC	1 cut(s)	1384
SspI	AATATT	1 cut(s)	863
SspMI	CTAG	4 cut(s)	870, 1299, 1527, 1695
StyD4I	CCNGG	3 cut(s)	1249, 1597, 1716
StyI	CCWWGG	1 cut(s)	1450
TaaI	ACNGT	3 cut(s)	1544, 1609, 1703
TaiI	ACGT	2 cut(s)	892, 1536
TaqI	TCGA	4 cut(s)	120, 186, 1192, 1726
TatI	WGTACW	3 cut(s)	632, 1109, 1557
TauI	GCSGC	7 cut(s)	29, 80, 83, 98, 685, 1234, 1711
TfiI	GAWTC	6 cut(s)	55, 188, 334, 1520, 1655, 1688
Tru1I	TTAA	6 cut(s)	765, 801, 1160, 1176, 1262, 1305
Tru9I	TTAA	6 cut(s)	765, 801, 1160, 1176, 1262, 1305
TscAI	CASTG	3 cut(s)	486, 994, 1372
TseFI	GTSAC	3 cut(s)	400, 743, 1529
TseI	GCWGC	5 cut(s)	256, 349, 616, 1140, 1234
Tsp45I	GTSAC	3 cut(s)	400, 743, 1529
TspDTI	ATGAA	7 cut(s)	459, 654, 942, 1230, 1490, 1602, 1701
TspRI	CASTG	3 cut(s)	486, 994, 1372
Van91I	CCANNNNNTGG	1 cut(s)	461
VpaK11BI	GGWCC	3 cut(s)	166, 496, 1337
VspI	ATTAAT	1 cut(s)	1262
XagI	CCTNNNNNAGG	1 cut(s)	1287
XapI	RAATTY	5 cut(s)	557, 661, 1420, 1442, 1477
XceI	RCATGY	1 cut(s)	1384
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1031
XspI	CTAG	4 cut(s)	870, 1299, 1527, 1695
ZrmI	AGTACT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.