Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010471

Physical Location & Seq

Genomic Coordinates Forward (+)

24513129 .. 24520383

Gene Structure 7255 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG235100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGAGAGAGCACGAGACCGAGAAGCTTCGCGCGGTGGTCAGAGACTGCGTCACCAAGCACCTCTACTCGTCGGCGATCTTCTTCGCCGACAAAGTCGCCGCCTTTACCAAGGAGCCCGCCGATATCTACATGCTCGCCCAGGCCCTCTTCCTCGGCCGCCATTACCGTCGAGCCTTCCACCTCCTCCACTCCTCCAAGATCGTCGACCGCGACCTCCGATTCCGTTACCTCGCCGCCAAGTGCCTCGAAGAGCTGAAGGACTGGCATCAATGCCTTAATATACTTGGTGATGCTAATGTGGATGAACATGGGAACATATGTGACAGAAACGATTCTAATCTCATGTACTTGGATAAAGGTGGTGAAGATCATGAAATCAATATAGGTTCTGCAATATGCTTTCTACGCGGTAAGGCATTTGAGGCTTTGGAAAACCGTGTCCAGGCGCGGAAGTGGTACAAAGCTGCAATCAAAGCCGATCCTTTGTGTTATGAGGCATTGGAATGTCTTATTGACAATCATATGCTGACATGTGAGGAAGAGGCAAGTCTACTTTCATCAATACAATTTGGTCCTCAAGATGGATGGCTTTCGTCATTTTACTCATGCTTGATAAAAAAGTATGACAAAGAAAATGTTGTAGAAGCAAACTTTGGAGAACTTGAAAAAGAGAGATGTAACAGTAACACTTCCGATCTTTCGTTCATTCACACTCTGAAAACCAACACTGACCTTCTGGCGTGCAAAGCAGAATACTACCATCAGTGTGGTGAATATCAAAAATGCTTTGAACTTACCTCTTTCCTACTTGAAAAAGACACTTTCCATCTCAAAAGTACATTAGTGCATCTAGCAGCTGCGATGGAACTTGGGAATTCAAATGAGCTCTATCTTATGGCATGCAATTTAGTGAAGGACTATCCTCAAAAGGCTTTGTCATGGTTCTCTGTTGGCTGTTACTATTATTGTATCAAAAAGTATGATCAGTCACGCCGTTATTTCAGTAAGGCTACCAACGTCGACGGAAACTTTCCACCTGCATGGATAGGATATGGGAATGCTTATTCTGCTCAAGATGAGGGAGATCAAGCTATGTCAATTTATCGCACTGCTGCTCGTTTGTTTCCAGGGTGTCATTTACCAACTTTGTACATTGGAATGGAGTACATGCGAACCCACAGCTACAAACTTGCTGAGCAGTTTTTGGTGCAGGCTAAGACTACTTGCCCATCGGATCCTCTCGTATATAATGAACTTGGAGTTGTTGCTTATCAAATGAAGGATTATAAAAAAGCTCTGTGGTGGTTTCAGAAAACTTTGGCGCAAATTCCTTCCCCTTTAGGTGAAATGTGGGAACCAACTGTAGTTAATATCGCCCATGTATACCGAAAATTGAAGATGTACAATGAAGCTATTTCATACTACGAGAAAGCACTTGCATTATCAACAAGAAGTGTGAGTACTTATGCAGGTCTTGCATATGCTTACCATTTGCAGGATAATTTTACTGCAGCAATAACACACTATCATAAAGCTTTGTGGATAAAGCCAGACGACCAGTTCTGTACTGAAATGCTAAGTTTAGCTTTAGCAGATGAATGCCACGGCAATGTAGACCACAGAACTGAATTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006275 GO:0008150 GO:0009888 GO:0009889 GO:0010087 GO:0010556 GO:0010564 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032502 GO:0032875 GO:0048856 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_10 TPR_16 TPR_2 TPR_3 TPR_7 TPR_8

Protein Analysis

545

Amino Acids

62.81

Weight (kDa)

6.17

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC3	PF12895	19 - 97	4.9e-21	Anaphase-promoting complex, cyclosome, subunit 3
TPR_8	PF13181	456 - 482	8.8e-06	Tetratricopeptide repeat
TPR_12	PF13424	456 - 513	3.2e-07	Tetratricopeptide repeat
TPR_1	PF00515	457 - 481	1.5e-06	Tetratricopeptide repeat
TPR_1	PF00515	488 - 519	8.6e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78770
fragaria_vesca	FvH4_3g18210 FvH4_3g18210 FvH4_3g18210 FvH4_3g18210 FvH4_3g18210
malus_domestica	MD11G1264600.v1.1
prunus_persica	Prupe.4G161700_v2.0.a1 Prupe.4G161700_v2.0.a1 Prupe.4G162300_v2.0.a1
pyrus_communis	pycom11g23290
rosa_chinensis	RchiOBHm_Chr5g0030761
rosa_laevigata	RLG00000033249
rosa_multiflora	Rmu_sc0015440.1_g000005
rosa_roxburghii	Rroxscaffold_1G00049560
rosa_rugosa	Rorug05G0120600
rosa_samantha	Rh5AG212600 Rh5BG211900 Rh5CG235100 Rh5DG216700
rosa_wichuraiana	Rw5G019470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
AarI	CACCTGC	1 cut(s)	1045
Acc36I	ACCTGC	2 cut(s)	1045, 1460
AccI	GTMKAC	5 cut(s)	204, 550, 1020, 1383, 1614
AccII	CGCG	5 cut(s)	30, 32, 210, 408, 448
AciI	CCGC	8 cut(s)	32, 99, 117, 157, 208, 234, 408, 448
AclWI	GGATC	3 cut(s)	473, 1229, 1242
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	3 cut(s)	874, 1326, 1628
AcuI	CTGAAG	1 cut(s)	275
AfaI	GTAC	8 cut(s)	347, 458, 838, 1151, 1166, 1403, 1462, 1567
AfiI	CCNNNNNNNGG	3 cut(s)	442, 581, 1495
AflIII	ACRYGT	1 cut(s)	530
AgsI	TTSAA	5 cut(s)	665, 791, 812, 879, 1396
AjnI	CCWGG	3 cut(s)	138, 441, 1126
AjuI	GAANNNNNNNTTGG	2 cut(s)	636, 668
Alw21I	GWGCWC	2 cut(s)	12, 888
Alw26I	GTCTC	2 cut(s)	8, 36
AlwI	GGATC	3 cut(s)	473, 1229, 1242
AlwNI	CAGNNNCTG	1 cut(s)	45
AoxI	GGCC	2 cut(s)	141, 154
ApeKI	GCWGC	5 cut(s)	464, 854, 857, 1112, 1511
ApoI	RAATTY	3 cut(s)	874, 1326, 1628
Asp700I	GAANNNNTTC	1 cut(s)	331
AspLEI	GCGC	3 cut(s)	32, 448, 1324
AspS9I	GGNCC	2 cut(s)	142, 572
AsuHPI	GGTGA	5 cut(s)	43, 299, 374, 782, 1355
AvaII	GGWCC	1 cut(s)	572
BamHI	GGATCC	1 cut(s)	1234
BanII	GRGCYC	2 cut(s)	117, 888
BarI	GAAGNNNNNNTAC	2 cut(s)	1444, 1476
BauI	CACGAG	1 cut(s)	11
Bbv12I	GWGCWC	2 cut(s)	12, 888
BbvI	GCAGC	5 cut(s)	451, 844, 866, 1099, 1523
BccI	CCATC	6 cut(s)	575, 579, 768, 834, 856, 1237
BceAI	ACGGC	2 cut(s)	978, 1621
BciT130I	CCWGG	3 cut(s)	140, 443, 1128
BclI	TGATCA	1 cut(s)	982
BcoDI	GTCTC	2 cut(s)	8, 36
BfaI	CTAG	1 cut(s)	851
BfmI	CTRYAG	2 cut(s)	1362, 1509
BfuAI	ACCTGC	2 cut(s)	1045, 1460
BisI	GCNGC	8 cut(s)	99, 157, 234, 465, 855, 858, 1113, 1512
BlpI	GCTNAGC	1 cut(s)	1194
BlsI	GCNGC	8 cut(s)	100, 158, 235, 466, 856, 859, 1114, 1513
BmcAI	AGTACT	1 cut(s)	1462
Bme1390I	CCNGG	3 cut(s)	140, 443, 1128
Bme18I	GGWCC	1 cut(s)	572
BmgT120I	GGNCC	2 cut(s)	142, 572
BmiI	GGNNCC	3 cut(s)	114, 1236, 1356
BmrFI	CCNGG	3 cut(s)	140, 443, 1128
BmsI	GCATC	3 cut(s)	274, 280, 856
Bpu1102I	GCTNAGC	1 cut(s)	1194
BpuEI	CTTGAG	2 cut(s)	561, 1056
BsaBI	GATNNNNATC	1 cut(s)	336
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	5 cut(s)	108, 138, 151, 1127, 1603
Bsc4I	CCNNNNNNNGG	3 cut(s)	442, 581, 1495
Bse1I	ACTGG	2 cut(s)	266, 1558
Bse3DI	GCAATG	1 cut(s)	1615
Bse8I	GATNNNNATC	1 cut(s)	336
BseBI	CCWGG	3 cut(s)	140, 443, 1128
BseDI	CCNNGG	5 cut(s)	108, 138, 151, 1127, 1603
BseGI	GGATG	2 cut(s)	307, 590
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	3 cut(s)	442, 581, 1495
BseMI	GCAATG	1 cut(s)	1615
BseMII	CTCAG	1 cut(s)	1185
BseNI	ACTGG	2 cut(s)	266, 1558
BseRI	GAGGAG	2 cut(s)	173, 181
BseX3I	CGGCCG	1 cut(s)	154
BseXI	GCAGC	5 cut(s)	451, 844, 866, 1099, 1523
BsgI	GTGCAG	1 cut(s)	1229
Bsh1236I	CGCG	5 cut(s)	30, 32, 210, 408, 448
Bsh1285I	CGRYCG	2 cut(s)	157, 208
BshFI	GGCC	2 cut(s)	143, 156
BsiEI	CGRYCG	2 cut(s)	157, 208
BsiHKAI	GWGCWC	2 cut(s)	12, 888
BslI	CCNNNNNNNGG	3 cut(s)	442, 581, 1495
BsmAI	GTCTC	2 cut(s)	8, 36
BsmI	GAATGC	2 cut(s)	1063, 1604
BsnI	GGCC	2 cut(s)	143, 156
Bso31I	GGTCTC	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	12, 117, 888
Bsp1407I	TGTACA	2 cut(s)	1149, 1401
Bsp143I	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
Bsp1720I	GCTNAGC	1 cut(s)	1194
BspACI	CCGC	8 cut(s)	32, 99, 117, 157, 208, 234, 408, 448
BspANI	GGCC	2 cut(s)	143, 156
BspCNI	CTCAG	1 cut(s)	1186
BspFNI	CGCG	5 cut(s)	30, 32, 210, 408, 448
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	3 cut(s)	114, 1236, 1356
BspMAI	CTGCAG	1 cut(s)	1513
BspMI	ACCTGC	2 cut(s)	1045, 1460
BspPI	GGATC	3 cut(s)	473, 1229, 1242
BspQI	GCTCTTC	1 cut(s)	243
BspTNI	GGTCTC	1 cut(s)	8
BsrDI	GCAATG	1 cut(s)	1615
BsrGI	TGTACA	2 cut(s)	1149, 1401
BsrI	ACTGG	2 cut(s)	266, 1558
BssECI	CCNNGG	5 cut(s)	108, 138, 151, 1127, 1603
BssMI	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
BssNAI	GTATAC	1 cut(s)	1384
BssSI	CACGAG	1 cut(s)	11
BssT1I	CCWWGG	1 cut(s)	108
Bst1107I	GTATAC	1 cut(s)	1384
Bst2BI	CACGAG	1 cut(s)	11
Bst2UI	CCWGG	3 cut(s)	140, 443, 1128
Bst4CI	ACNGT	4 cut(s)	167, 437, 683, 1363
Bst6I	CTCTTC	3 cut(s)	152, 243, 534
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstAUI	TGTACA	2 cut(s)	1149, 1401
BstC8I	GCNNGC	5 cut(s)	117, 135, 742, 901, 1212
BstDEI	CTNAG	3 cut(s)	1194, 1215, 1577
BstDSI	CCRYGG	1 cut(s)	1603
BstF5I	GGATG	2 cut(s)	307, 590
BstFNI	CGCG	5 cut(s)	30, 32, 210, 408, 448
BstHHI	GCGC	3 cut(s)	32, 448, 1324
BstKTI	GATC	8 cut(s)	78, 201, 370, 481, 697, 985, 1087, 1237
BstMAI	GTCTC	2 cut(s)	8, 36
BstMBI	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
BstMCI	CGRYCG	2 cut(s)	157, 208
BstMWI	GCNNNNNNNGC	6 cut(s)	405, 422, 473, 746, 1067, 1475
BstNI	CCWGG	3 cut(s)	140, 443, 1128
BstNSI	RCATGY	4 cut(s)	133, 534, 903, 1171
BstSCI	CCNGG	3 cut(s)	138, 441, 1126
BstSFI	CTRYAG	2 cut(s)	1362, 1509
BstUI	CGCG	5 cut(s)	30, 32, 210, 408, 448
BstV1I	GCAGC	5 cut(s)	451, 844, 866, 1099, 1523
BstX2I	RGATCY	1 cut(s)	1234
BstXI	CCANNNNNNTGG	2 cut(s)	767, 1041
BstYI	RGATCY	1 cut(s)	1234
BstZ17I	GTATAC	1 cut(s)	1384
BstZI	CGGCCG	1 cut(s)	154
BsuRI	GGCC	2 cut(s)	143, 156
BtgI	CCRYGG	1 cut(s)	1603
BtgZI	GCGATG	1 cut(s)	875
BtsCI	GGATG	2 cut(s)	307, 590
BtsI	GCAGTG	1 cut(s)	1107
BtsIMutI	CAGTG	3 cut(s)	726, 770, 1107
BveI	ACCTGC	2 cut(s)	1045, 1460
Cac8I	GCNNGC	5 cut(s)	117, 135, 742, 901, 1212
CaiI	CAGNNNCTG	1 cut(s)	45
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	3 cut(s)	32, 448, 1324
Cfr13I	GGNCC	2 cut(s)	142, 572
CseI	GACGC	1 cut(s)	37
Csp6I	GTAC	8 cut(s)	346, 457, 837, 1150, 1165, 1402, 1461, 1566
CviQI	GTAC	8 cut(s)	346, 457, 837, 1150, 1165, 1402, 1461, 1566
DdeI	CTNAG	3 cut(s)	1194, 1215, 1577
DpnI	GATC	8 cut(s)	77, 200, 369, 480, 696, 984, 1086, 1236
DpnII	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
EaeI	YGGCCR	1 cut(s)	154
EagI	CGGCCG	1 cut(s)	154
Eam1104I	CTCTTC	3 cut(s)	152, 243, 534
EarI	CTCTTC	3 cut(s)	152, 243, 534
Ecl136II	GAGCTC	1 cut(s)	886
EclXI	CGGCCG	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	108
Eco24I	GRGCYC	2 cut(s)	117, 888
Eco31I	GGTCTC	1 cut(s)	8
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	1 cut(s)	572
Eco52I	CGGCCG	1 cut(s)	154
Eco53kI	GAGCTC	1 cut(s)	886
Eco57I	CTGAAG	1 cut(s)	275
EcoICRI	GAGCTC	1 cut(s)	886
EcoO109I	RGGNCCY	1 cut(s)	142
EcoRI	GAATTC	2 cut(s)	874, 1628
EcoRII	CCWGG	3 cut(s)	138, 441, 1126
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	1 cut(s)	108
EcoT38I	GRGCYC	2 cut(s)	117, 888
ErhI	CCWWGG	1 cut(s)	108
FalI	AAGNNNNNCTT	2 cut(s)	1570, 1602
FauI	CCCGC	1 cut(s)	124
FauNDI	CATATG	3 cut(s)	317, 522, 1480
FbaI	TGATCA	1 cut(s)	982
FblI	GTMKAC	5 cut(s)	204, 550, 1020, 1383, 1614
Fnu4HI	GCNGC	8 cut(s)	99, 157, 234, 465, 855, 858, 1113, 1512
FokI	GGATG	2 cut(s)	314, 597
FriOI	GRGCYC	2 cut(s)	117, 888
Fsp4HI	GCNGC	8 cut(s)	99, 157, 234, 465, 855, 858, 1113, 1512
FspBI	CTAG	1 cut(s)	851
GlaI	GCGC	3 cut(s)	31, 447, 1323
GluI	GCNGC	8 cut(s)	99, 157, 234, 465, 855, 858, 1113, 1512
HaeIII	GGCC	2 cut(s)	143, 156
HgaI	GACGC	1 cut(s)	37
HhaI	GCGC	3 cut(s)	32, 448, 1324
Hin6I	GCGC	3 cut(s)	30, 446, 1322
HinP1I	GCGC	3 cut(s)	30, 446, 1322
HincII	GTYRAC	2 cut(s)	205, 1021
HindII	GTYRAC	2 cut(s)	205, 1021
HindIII	AAGCTT	2 cut(s)	23, 1533
HinfI	GANTC	2 cut(s)	219, 332
HphI	GGTGA	5 cut(s)	43, 299, 374, 782, 1355
Hpy166II	GTNNAC	5 cut(s)	205, 551, 1021, 1384, 1615
Hpy188I	TCNGA	7 cut(s)	41, 218, 694, 717, 1234, 1311, 1634
Hpy188III	TCNNGA	3 cut(s)	371, 578, 1073
Hpy8I	GTNNAC	5 cut(s)	205, 551, 1021, 1384, 1615
Hpy99I	CGWCG	5 cut(s)	73, 171, 206, 1022, 1025
HpyAV	CCTTC	6 cut(s)	184, 250, 743, 907, 1273, 1341
HpyCH4III	ACNGT	4 cut(s)	167, 437, 683, 1363
HpyCH4IV	ACGT	1 cut(s)	1017
HpyF10VI	GCNNNNNNNGC	6 cut(s)	405, 422, 473, 746, 1067, 1475
HpyF3I	CTNAG	3 cut(s)	1194, 1215, 1577
HpySE526I	ACGT	1 cut(s)	1017
HspAI	GCGC	3 cut(s)	30, 446, 1322
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	1 cut(s)	112
Lsp1109I	GCAGC	5 cut(s)	451, 844, 866, 1099, 1523
LweI	GCATC	3 cut(s)	274, 280, 856
MaeI	CTAG	1 cut(s)	851
MaeII	ACGT	1 cut(s)	1017
MaeIII	GTNAC	7 cut(s)	49, 224, 320, 677, 683, 956, 987
MalI	GATC	8 cut(s)	77, 200, 369, 480, 696, 984, 1086, 1236
MboI	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
MboII	GAAGA	7 cut(s)	70, 73, 139, 260, 377, 551, 1408
MflI	RGATCY	1 cut(s)	1234
MhlI	GDGCHC	3 cut(s)	12, 117, 888
MluCI	AATT	8 cut(s)	566, 874, 904, 1098, 1326, 1391, 1501, 1628
MroXI	GAANNNNTTC	1 cut(s)	331
MseI	TTAA	2 cut(s)	276, 1368
MslI	CAYNNNNRTG	5 cut(s)	502, 765, 1039, 1157, 1608
MspA1I	CMGCKG	1 cut(s)	857
MspR9I	CCNGG	3 cut(s)	140, 443, 1128
Mva1269I	GAATGC	2 cut(s)	1063, 1604
MvaI	CCWGG	3 cut(s)	140, 443, 1128
MvnI	CGCG	5 cut(s)	30, 32, 210, 408, 448
MwoI	GCNNNNNNNGC	6 cut(s)	405, 422, 473, 746, 1067, 1475
NdeI	CATATG	3 cut(s)	317, 522, 1480
NdeII	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
NlaIV	GGNNCC	3 cut(s)	114, 1236, 1356
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	3 cut(s)	49, 320, 987
NspI	RCATGY	4 cut(s)	133, 534, 903, 1171
PaeI	GCATGC	1 cut(s)	903
PagI	TCATGA	1 cut(s)	370
PaqCI	CACCTGC	1 cut(s)	1045
PciI	ACATGT	1 cut(s)	530
PciSI	GCTCTTC	1 cut(s)	243
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PctI	GAATGC	2 cut(s)	1063, 1604
PdmI	GAANNNNTTC	1 cut(s)	331
PfeI	GAWTC	2 cut(s)	219, 332
PflFI	GACNNNGTC	2 cut(s)	47, 92
PkrI	GCNGC	8 cut(s)	100, 158, 235, 466, 856, 859, 1114, 1513
PscI	ACATGT	1 cut(s)	530
PsiI	TTATAA	1 cut(s)	1287
Psp124BI	GAGCTC	1 cut(s)	888
Psp6I	CCWGG	3 cut(s)	138, 441, 1126
PspGI	CCWGG	3 cut(s)	138, 441, 1126
PspN4I	GGNNCC	3 cut(s)	114, 1236, 1356
PspPI	GGNCC	2 cut(s)	142, 572
PstI	CTGCAG	1 cut(s)	1513
PstNI	CAGNNNCTG	1 cut(s)	45
PsuI	RGATCY	1 cut(s)	1234
PsyI	GACNNNGTC	2 cut(s)	47, 92
PvuII	CAGCTG	1 cut(s)	857
RsaI	GTAC	8 cut(s)	347, 458, 838, 1151, 1166, 1403, 1462, 1567
RsaNI	GTAC	8 cut(s)	346, 457, 837, 1150, 1165, 1402, 1461, 1566
RseI	CAYNNNNRTG	5 cut(s)	502, 765, 1039, 1157, 1608
SacI	GAGCTC	1 cut(s)	888
SalI	GTCGAC	2 cut(s)	203, 1019
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	2 cut(s)	276, 1368
SatI	GCNGC	8 cut(s)	99, 157, 234, 465, 855, 858, 1113, 1512
Sau3AI	GATC	8 cut(s)	75, 198, 367, 478, 694, 982, 1084, 1234
Sau96I	GGNCC	2 cut(s)	142, 572
ScaI	AGTACT	1 cut(s)	1462
ScrFI	CCNGG	3 cut(s)	140, 443, 1128
SduI	GDGCHC	3 cut(s)	12, 117, 888
SfaNI	GCATC	3 cut(s)	274, 280, 856
SfcI	CTRYAG	2 cut(s)	1362, 1509
SgrDI	CGTCGACG	1 cut(s)	1019
SinI	GGWCC	1 cut(s)	572
SmiMI	CAYNNNNRTG	5 cut(s)	502, 765, 1039, 1157, 1608
SmlI	CTYRAG	2 cut(s)	576, 1071
SmoI	CTYRAG	2 cut(s)	576, 1071
SphI	GCATGC	1 cut(s)	903
Sse9I	AATT	8 cut(s)	566, 874, 904, 1098, 1326, 1391, 1501, 1628
SsiI	CCGC	8 cut(s)	32, 99, 117, 157, 208, 234, 408, 448
SspMI	CTAG	1 cut(s)	851
SstI	GAGCTC	1 cut(s)	888
StyD4I	CCNGG	3 cut(s)	138, 441, 1126
StyI	CCWWGG	1 cut(s)	108
TaaI	ACNGT	4 cut(s)	167, 437, 683, 1363
TaiI	ACGT	1 cut(s)	1020
TaqI	TCGA	4 cut(s)	169, 204, 246, 1020
TaqII	GACCGA	1 cut(s)	32
TasI	AATT	8 cut(s)	566, 874, 904, 1098, 1326, 1391, 1501, 1628
TatI	WGTACW	7 cut(s)	345, 836, 1149, 1164, 1401, 1460, 1565
TauI	GCSGC	3 cut(s)	101, 159, 236
TfiI	GAWTC	2 cut(s)	219, 332
Tru1I	TTAA	2 cut(s)	276, 1368
Tru9I	TTAA	2 cut(s)	276, 1368
TscAI	CASTG	3 cut(s)	733, 770, 1114
TseFI	GTSAC	3 cut(s)	49, 320, 987
TseI	GCWGC	5 cut(s)	464, 854, 857, 1112, 1511
Tsp45I	GTSAC	3 cut(s)	49, 320, 987
TspDTI	ATGAA	9 cut(s)	318, 387, 546, 694, 1266, 1292, 1407, 1422, 1611
TspGWI	ACGGA	2 cut(s)	212, 1038
TspRI	CASTG	3 cut(s)	733, 770, 1114
Tth111I	GACNNNGTC	2 cut(s)	47, 92
VpaK11BI	GGWCC	1 cut(s)	572
XapI	RAATTY	3 cut(s)	874, 1326, 1628
XceI	RCATGY	4 cut(s)	133, 534, 903, 1171
XmiI	GTMKAC	5 cut(s)	204, 550, 1020, 1383, 1614
XmnI	GAANNNNTTC	1 cut(s)	331
XspI	CTAG	1 cut(s)	851
ZrmI	AGTACT	1 cut(s)	1462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.