Prupe.4G167200_v2.0.a1

Olee1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0016288
Physical Location & Seq
Forward (+)
9700759 .. 9701972
1214 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G167200.1

Sequence Viewer

Length: 492 bp
ATGGCCAAGAACGTGAGTATCGTAGCATTTGTTGTCGCCCTGTCCTGCTTCTGCTCTTTGGCCTATGCCACAACCAAAAGCAATCTCTTTGTGGAGGGCAGGGTGTACTGCGACCCATGTCGTGTCCAGTTCGAGACTAGACTTAGTGTACCCCTCGAAGGTGCTGTGGTAGCTTTGGAGTGCCGAGGCCGTGAGAATGGTACCTTGGCATACACACTCCAAGGCAAGACCGATAAGAATGGCATCTACAGCCTTCCCACCGATGAGGACATGGAGGAGCAAATCTGTGAGGTGAGGACCGTGAGCAGCCCTAGGGCTAATTGCAATGAACACTTTGAATTCGAGAGAGCTAGGGTTTTGCTGACATACAACAATGGTGTCAAGTCCATGGCTCGATATGCCAACCCCCTTGGGTTCATGCAGAAGGAGAGTGTCACTGAGTGTGAGCAAGTTCTTAAGGAATTGTTCCCCGAGGAGACCGAGGAAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

164

Amino Acids

18.31

Weight (kDa)

4.87

Isoelectric Point (pI)

33.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016288)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g18470
malus_domestica MD03G1241700.v1.1 MD11G1261000.v1.1
prunus_persica Prupe.4G167200_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0031231
rosa_laevigata RLG00000033293
rosa_multiflora Rmu_sc0004014.1_g000008
rosa_roxburghii Rroxscaffold_1G00049050
rosa_rugosa Rorug05G0123000
rosa_samantha Rh5AG216600 Rh5BG216000 Rh5CG239800 Rh5DG221100
rosa_wichuraiana Rw0G010930 Rw5G019810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 200
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 338
AdeI CACNNNGTG 1 cut(s) 441
AfaI GTAC 3 cut(s) 107, 150, 202
AfiI CCNNNNNNNGG 1 cut(s) 158
AflII CTTAAG 1 cut(s) 455
AgsI TTSAA 1 cut(s) 338
AjuI GAANNNNNNNTTGG 2 cut(s) 188, 220
AluBI AGCT 2 cut(s) 173, 350
AluI AGCT 2 cut(s) 173, 350
Alw26I GTCTC 2 cut(s) 128, 470
Ama87I CYCGRG 1 cut(s) 470
AoxI GGCC 3 cut(s) 3, 60, 187
ApeKI GCWGC 1 cut(s) 306
ApoI RAATTY 1 cut(s) 338
Asp718I GGTACC 1 cut(s) 200
AspA2I CCTAGG 1 cut(s) 311
AspS9I GGNCC 1 cut(s) 297
AsuHPI GGTGA 1 cut(s) 304
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 1 cut(s) 297
AvrII CCTAGG 1 cut(s) 311
BaeI ACNNNNGTAYC 1 cut(s) 34
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 200
BbvI GCAGC 1 cut(s) 318
BceAI ACGGC 1 cut(s) 174
BcoDI GTCTC 2 cut(s) 128, 470
BfaI CTAG 3 cut(s) 138, 312, 351
BfmI CTRYAG 1 cut(s) 247
BfrI CTTAAG 1 cut(s) 455
BisI GCNGC 1 cut(s) 307
BlnI CCTAGG 1 cut(s) 311
BlsI GCNGC 1 cut(s) 308
Bme18I GGWCC 1 cut(s) 297
BmeT110I CYCGRG 1 cut(s) 470
BmgT120I GGNCC 1 cut(s) 297
BmiI GGNNCC 1 cut(s) 202
BmsI GCATC 1 cut(s) 252
BoxI GACNNNNGTC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 470
BsaJI CCNNGG 8 cut(s) 184, 204, 220, 311, 387, 409, 471, 480
Bsc4I CCNNNNNNNGG 1 cut(s) 158
Bse1I ACTGG 1 cut(s) 127
Bse3DI GCAATG 1 cut(s) 331
BseDI CCNNGG 8 cut(s) 184, 204, 220, 311, 387, 409, 471, 480
BseLI CCNNNNNNNGG 1 cut(s) 158
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 1 cut(s) 127
BseRI GAGGAG 2 cut(s) 290, 488
BseXI GCAGC 1 cut(s) 318
BshFI GGCC 3 cut(s) 5, 62, 189
BshNI GGYRCC 1 cut(s) 200
BsiHKCI CYCGRG 1 cut(s) 470
BslI CCNNNNNNNGG 1 cut(s) 158
BsmAI GTCTC 2 cut(s) 128, 470
BsnI GGCC 3 cut(s) 5, 62, 189
Bso31I GGTCTC 1 cut(s) 470
BsoBI CYCGRG 1 cut(s) 470
Bsp19I CCATGG 1 cut(s) 387
BspANI GGCC 3 cut(s) 5, 62, 189
BspCNI CTCAG 1 cut(s) 430
BspLI GGNNCC 1 cut(s) 202
BspT107I GGYRCC 1 cut(s) 200
BspTI CTTAAG 1 cut(s) 455
BspTNI GGTCTC 1 cut(s) 470
BsrDI GCAATG 1 cut(s) 331
BsrI ACTGG 1 cut(s) 127
BssECI CCNNGG 8 cut(s) 184, 204, 220, 311, 387, 409, 471, 480
BssT1I CCWWGG 5 cut(s) 204, 220, 311, 387, 409
Bst4CI ACNGT 1 cut(s) 301
BstAFI CTTAAG 1 cut(s) 455
BstDEI CTNAG 2 cut(s) 143, 438
BstDSI CCRYGG 1 cut(s) 387
BstMAI GTCTC 2 cut(s) 128, 470
BstMWI GCNNNNNNNGC 3 cut(s) 170, 249, 398
BstPAI GACNNNNGTC 1 cut(s) 117
BstSFI CTRYAG 1 cut(s) 247
BstV1I GCAGC 1 cut(s) 318
BsuRI GGCC 3 cut(s) 5, 62, 189
BtgI CCRYGG 1 cut(s) 387
BtsIMutI CAGTG 1 cut(s) 435
Cfr13I GGNCC 1 cut(s) 297
Csp6I GTAC 3 cut(s) 106, 149, 201
CviAII CATG 4 cut(s) 117, 271, 388, 418
CviJI RGCY 9 cut(s) 5, 62, 173, 189, 252, 309, 317, 350, 392
CviKI_1 RGCY 9 cut(s) 5, 62, 173, 189, 252, 309, 317, 350, 392
CviQI GTAC 3 cut(s) 106, 149, 201
DdeI CTNAG 2 cut(s) 143, 438
DraIII CACNNNGTG 1 cut(s) 441
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 5 cut(s) 204, 220, 311, 387, 409
Eco31I GGTCTC 1 cut(s) 470
Eco47I GGWCC 1 cut(s) 297
Eco88I CYCGRG 1 cut(s) 470
EcoRI GAATTC 1 cut(s) 338
EcoT14I CCWWGG 5 cut(s) 204, 220, 311, 387, 409
ErhI CCWWGG 5 cut(s) 204, 220, 311, 387, 409
FaeI CATG 4 cut(s) 120, 274, 391, 421
FaiI YATR 9 cut(s) 66, 118, 211, 272, 367, 389, 399, 419, 490
FatI CATG 4 cut(s) 116, 270, 387, 417
Fnu4HI GCNGC 1 cut(s) 307
Fsp4HI GCNGC 1 cut(s) 307
FspBI CTAG 3 cut(s) 138, 312, 351
GluI GCNGC 1 cut(s) 307
HaeIII GGCC 3 cut(s) 5, 62, 189
Hin1II CATG 4 cut(s) 120, 274, 391, 421
HphI GGTGA 1 cut(s) 304
Hpy166II GTNNAC 2 cut(s) 106, 149
Hpy188III TCNNGA 2 cut(s) 133, 343
Hpy8I GTNNAC 2 cut(s) 106, 149
HpyAV CCTTC 3 cut(s) 152, 263, 418
HpyCH4III ACNGT 1 cut(s) 301
HpyCH4IV ACGT 1 cut(s) 12
HpyCH4V TGCA 2 cut(s) 324, 421
HpyF10VI GCNNNNNNNGC 3 cut(s) 170, 249, 398
HpyF3I CTNAG 2 cut(s) 143, 438
HpySE526I ACGT 1 cut(s) 12
Hsp92II CATG 4 cut(s) 120, 274, 391, 421
KpnI GGTACC 1 cut(s) 204
LmnI GCTCC 1 cut(s) 277
LpnPI CCDG 4 cut(s) 53, 58, 85, 140
Lsp1109I GCAGC 1 cut(s) 318
LweI GCATC 1 cut(s) 252
MaeI CTAG 3 cut(s) 138, 312, 351
MaeII ACGT 1 cut(s) 12
MaeIII GTNAC 1 cut(s) 433
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 319, 338, 461
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 9 cut(s) 88, 164, 179, 259, 268, 283, 288, 466, 475
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 456
Msp20I TGGCCA 1 cut(s) 5
MspCI CTTAAG 1 cut(s) 455
MwoI GCNNNNNNNGC 3 cut(s) 170, 249, 398
NcoI CCATGG 1 cut(s) 387
NlaIII CATG 4 cut(s) 120, 274, 391, 421
NlaIV GGNNCC 1 cut(s) 202
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 1 cut(s) 433
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PkrI GCNGC 1 cut(s) 308
PshAI GACNNNNGTC 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 202
PspPI GGNCC 1 cut(s) 297
RsaI GTAC 3 cut(s) 107, 150, 202
RsaNI GTAC 3 cut(s) 106, 149, 201
SaqAI TTAA 1 cut(s) 456
SatI GCNGC 1 cut(s) 307
Sau96I GGNCC 1 cut(s) 297
SetI ASST 6 cut(s) 15, 163, 175, 206, 294, 352
SfaNI GCATC 1 cut(s) 252
SfcI CTRYAG 1 cut(s) 247
SinI GGWCC 1 cut(s) 297
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
Sse9I AATT 3 cut(s) 319, 338, 461
SspMI CTAG 3 cut(s) 138, 312, 351
StyI CCWWGG 5 cut(s) 204, 220, 311, 387, 409
TaaI ACNGT 1 cut(s) 301
TaiI ACGT 1 cut(s) 15
TaqI TCGA 4 cut(s) 132, 156, 342, 394
TaqII GACCGA 1 cut(s) 245
TasI AATT 3 cut(s) 319, 338, 461
TatI WGTACW 1 cut(s) 105
Tru1I TTAA 1 cut(s) 456
Tru9I TTAA 1 cut(s) 456
TscAI CASTG 1 cut(s) 442
TseFI GTSAC 1 cut(s) 433
TseI GCWGC 1 cut(s) 306
Tsp45I GTSAC 1 cut(s) 433
TspDTI ATGAA 2 cut(s) 342, 406
TspRI CASTG 1 cut(s) 442
Vha464I CTTAAG 1 cut(s) 455
VpaK11BI GGWCC 1 cut(s) 297
XapI RAATTY 1 cut(s) 338
XmaJI CCTAGG 1 cut(s) 311
XspI CTAG 3 cut(s) 138, 312, 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.