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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15095 AT3G15095 AT3G15095 |
| fragaria_vesca | FvH4_3g19150 FvH4_3g19150 |
| malus_domestica | MD03G1236100.v1.1 MD11G1256900.v1.1 |
| prunus_persica | Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1 |
| pyrus_communis | pycom03g18230 pycom11g22700 |
| rosa_chinensis | RchiOBHm_Chr5g0032241 |
| rosa_laevigata | RLG00000033370 |
| rosa_multiflora | Rmu_sc0018683.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00048220 |
| rosa_rugosa | Rorug05G0129900 |
| rosa_samantha | Rh5AG223800 Rh5BG224500 Rh5CG249800 Rh5DG229100 |
| rosa_wichuraiana | Rw5G020410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2018 |
| AccB1I | GGYRCC | 1 cut(s) | 1966 |
| AccI | GTMKAC | 1 cut(s) | 1911 |
| AccII | CGCG | 2 cut(s) | 2104, 2216 |
| AclWI | GGATC | 3 cut(s) | 384, 1016, 1484 |
| AcoI | YGGCCR | 3 cut(s) | 232, 874, 2043 |
| AcsI | RAATTY | 1 cut(s) | 1505 |
| AcuI | CTGAAG | 2 cut(s) | 1233, 1683 |
| AfaI | GTAC | 5 cut(s) | 268, 859, 1162, 1173, 1473 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 260, 589, 1713, 1935, 2023, 2149 |
| AflIII | ACRYGT | 3 cut(s) | 326, 1897, 2156 |
| AgeI | ACCGGT | 1 cut(s) | 663 |
| AgsI | TTSAA | 8 cut(s) | 296, 530, 902, 916, 931, 1094, 1376, 1511 |
| AhlI | ACTAGT | 1 cut(s) | 269 |
| AjiI | CACGTC | 2 cut(s) | 1900, 2157 |
| AjnI | CCWGG | 1 cut(s) | 148 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1304, 1336, 1733, 1765 |
| AluBI | AGCT | 8 cut(s) | 76, 124, 464, 481, 620, 1535, 1597, 2065 |
| AluI | AGCT | 8 cut(s) | 76, 124, 464, 481, 620, 1535, 1597, 2065 |
| Alw21I | GWGCWC | 2 cut(s) | 78, 452 |
| Alw26I | GTCTC | 4 cut(s) | 486, 1193, 1691, 2147 |
| AlwI | GGATC | 3 cut(s) | 384, 1016, 1484 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1661, 2065 |
| AoxI | GGCC | 6 cut(s) | 151, 232, 874, 1715, 1926, 2043 |
| ApeKI | GCWGC | 9 cut(s) | 39, 399, 501, 1037, 1070, 1345, 1961, 1978, 2106 |
| ApoI | RAATTY | 1 cut(s) | 1505 |
| AsiGI | ACCGGT | 1 cut(s) | 663 |
| AspLEI | GCGC | 5 cut(s) | 290, 399, 1978, 2106, 2216 |
| AspS9I | GGNCC | 4 cut(s) | 636, 1716, 2030, 2073 |
| AsuC2I | CCSGG | 2 cut(s) | 1759, 2144 |
| AsuHPI | GGTGA | 3 cut(s) | 527, 842, 1262 |
| AvaII | GGWCC | 3 cut(s) | 636, 2030, 2073 |
| AxyI | CCTNAGG | 1 cut(s) | 318 |
| BalI | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| BanI | GGYRCC | 1 cut(s) | 1966 |
| BanII | GRGCYC | 1 cut(s) | 78 |
| BbsI | GAAGAC | 2 cut(s) | 660, 1269 |
| Bbv12I | GWGCWC | 2 cut(s) | 78, 452 |
| BbvI | GCAGC | 9 cut(s) | 51, 411, 513, 1024, 1057, 1357, 1948, 1990, 2093 |
| BccI | CCATC | 9 cut(s) | 27, 785, 791, 817, 1214, 1241, 2035, 2173, 2197 |
| BceAI | ACGGC | 1 cut(s) | 2074 |
| BciT130I | CCWGG | 1 cut(s) | 150 |
| BciVI | GTATCC | 1 cut(s) | 1738 |
| BcnI | CCSGG | 2 cut(s) | 1759, 2144 |
| BcoDI | GTCTC | 4 cut(s) | 486, 1193, 1691, 2147 |
| BcuI | ACTAGT | 1 cut(s) | 269 |
| BfaI | CTAG | 6 cut(s) | 255, 270, 417, 465, 681, 1637 |
| BfmI | CTRYAG | 1 cut(s) | 1536 |
| BfuAI | ACCTGC | 1 cut(s) | 2018 |
| BfuI | GTATCC | 1 cut(s) | 1738 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2191 |
| BglII | AGATCT | 1 cut(s) | 1016 |
| BmcAI | AGTACT | 2 cut(s) | 859, 1173 |
| Bme1390I | CCNGG | 3 cut(s) | 150, 1759, 2144 |
| Bme18I | GGWCC | 3 cut(s) | 636, 2030, 2073 |
| BmgBI | CACGTC | 2 cut(s) | 1900, 2157 |
| BmgT120I | GGNCC | 4 cut(s) | 636, 1716, 2030, 2073 |
| BmiI | GGNNCC | 5 cut(s) | 581, 637, 1968, 2074, 2184 |
| BmrFI | CCNGG | 3 cut(s) | 150, 1759, 2144 |
| BmrI | ACTGGG | 1 cut(s) | 2012 |
| BmsI | GCATC | 3 cut(s) | 231, 1053, 1871 |
| BmuI | ACTGGG | 1 cut(s) | 2012 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1119 |
| BpiI | GAAGAC | 2 cut(s) | 660, 1269 |
| BpmI | CTGGAG | 1 cut(s) | 1902 |
| BpuEI | CTTGAG | 3 cut(s) | 589, 1062, 1196 |
| BpuMI | CCSGG | 2 cut(s) | 1759, 2144 |
| Bsa29I | ATCGAT | 1 cut(s) | 1051 |
| BsaJI | CCNNGG | 5 cut(s) | 148, 514, 1845, 1866, 1997 |
| BsaWI | WCCGGW | 3 cut(s) | 663, 1792, 2032 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 260, 589, 1713, 1935, 2023, 2149 |
| Bse118I | RCCGGY | 3 cut(s) | 663, 1969, 1981 |
| Bse1I | ACTGG | 3 cut(s) | 213, 1025, 2018 |
| Bse21I | CCTNAGG | 1 cut(s) | 318 |
| Bse3DI | GCAATG | 1 cut(s) | 265 |
| BseBI | CCWGG | 1 cut(s) | 150 |
| BseCI | ATCGAT | 1 cut(s) | 1051 |
| BseDI | CCNNGG | 5 cut(s) | 148, 514, 1845, 1866, 1997 |
| BseGI | GGATG | 8 cut(s) | 56, 113, 802, 1225, 1312, 1330, 1441, 1875 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 260, 589, 1713, 1935, 2023, 2149 |
| BseMI | GCAATG | 1 cut(s) | 265 |
| BseMII | CTCAG | 3 cut(s) | 157, 208, 220 |
| BseNI | ACTGG | 3 cut(s) | 213, 1025, 2018 |
| BseRI | GAGGAG | 5 cut(s) | 118, 175, 901, 1065, 1118 |
| BseXI | GCAGC | 9 cut(s) | 51, 411, 513, 1024, 1057, 1357, 1948, 1990, 2093 |
| BseYI | CCCAGC | 2 cut(s) | 1443, 2219 |
| BsgI | GTGCAG | 2 cut(s) | 777, 1846 |
| Bsh1236I | CGCG | 2 cut(s) | 2104, 2216 |
| BshFI | GGCC | 6 cut(s) | 153, 234, 876, 1717, 1928, 2045 |
| BshNI | GGYRCC | 1 cut(s) | 1966 |
| BshTI | ACCGGT | 1 cut(s) | 663 |
| BshVI | ATCGAT | 1 cut(s) | 1051 |
| BsiHKAI | GWGCWC | 2 cut(s) | 78, 452 |
| BsiSI | CCGG | 8 cut(s) | 664, 1758, 1793, 1889, 1970, 1982, 2033, 2144 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 260, 589, 1713, 1935, 2023, 2149 |
| BsmAI | GTCTC | 4 cut(s) | 486, 1193, 1691, 2147 |
| BsmBI | CGTCTC | 1 cut(s) | 2147 |
| BsmI | GAATGC | 3 cut(s) | 569, 997, 1394 |
| BsnI | GGCC | 6 cut(s) | 153, 234, 876, 1717, 1928, 2045 |
| Bsp1286I | GDGCHC | 2 cut(s) | 78, 452 |
| Bsp143I | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| BspANI | GGCC | 6 cut(s) | 153, 234, 876, 1717, 1928, 2045 |
| BspCNI | CTCAG | 3 cut(s) | 156, 207, 219 |
| BspDI | ATCGAT | 1 cut(s) | 1051 |
| BspFNI | CGCG | 2 cut(s) | 2104, 2216 |
| BspHI | TCATGA | 1 cut(s) | 1005 |
| BspLI | GGNNCC | 5 cut(s) | 581, 637, 1968, 2074, 2184 |
| BspMI | ACCTGC | 1 cut(s) | 2018 |
| BspPI | GGATC | 3 cut(s) | 384, 1016, 1484 |
| BspQI | GCTCTTC | 1 cut(s) | 83 |
| BspT107I | GGYRCC | 1 cut(s) | 1966 |
| BsrDI | GCAATG | 1 cut(s) | 265 |
| BsrFI | RCCGGY | 3 cut(s) | 663, 1969, 1981 |
| BsrI | ACTGG | 3 cut(s) | 213, 1025, 2018 |
| BssAI | RCCGGY | 3 cut(s) | 663, 1969, 1981 |
| BssECI | CCNNGG | 5 cut(s) | 148, 514, 1845, 1866, 1997 |
| BssMI | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| BssT1I | CCWWGG | 2 cut(s) | 514, 1845 |
| Bst2UI | CCWGG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 2 cut(s) | 1702, 1806 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 764 |
| BstC8I | GCNNGC | 8 cut(s) | 74, 203, 1068, 1449, 1770, 1820, 1886, 2196 |
| BstDEI | CTNAG | 4 cut(s) | 143, 194, 206, 318 |
| BstDSI | CCRYGG | 1 cut(s) | 1866 |
| BstF5I | GGATG | 8 cut(s) | 56, 113, 802, 1225, 1312, 1330, 1441, 1875 |
| BstFNI | CGCG | 2 cut(s) | 2104, 2216 |
| BstHHI | GCGC | 5 cut(s) | 290, 399, 1978, 2106, 2216 |
| BstKTI | GATC | 7 cut(s) | 392, 543, 731, 838, 1019, 1024, 1492 |
| BstMAI | GTCTC | 4 cut(s) | 486, 1193, 1691, 2147 |
| BstMBI | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| BstNI | CCWGG | 1 cut(s) | 150 |
| BstNSI | RCATGY | 1 cut(s) | 330 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1119 |
| BstSCI | CCNGG | 3 cut(s) | 148, 1757, 2142 |
| BstSFI | CTRYAG | 1 cut(s) | 1536 |
| BstUI | CGCG | 2 cut(s) | 2104, 2216 |
| BstV1I | GCAGC | 9 cut(s) | 51, 411, 513, 1024, 1057, 1357, 1948, 1990, 2093 |
| BstV2I | GAAGAC | 2 cut(s) | 660, 1269 |
| BstX2I | RGATCY | 3 cut(s) | 389, 1016, 1489 |
| BstYI | RGATCY | 3 cut(s) | 389, 1016, 1489 |
| Bsu15I | ATCGAT | 1 cut(s) | 1051 |
| Bsu36I | CCTNAGG | 1 cut(s) | 318 |
| BsuI | GTATCC | 1 cut(s) | 1738 |
| BsuRI | GGCC | 6 cut(s) | 153, 234, 876, 1717, 1928, 2045 |
| BsuTUI | ATCGAT | 1 cut(s) | 1051 |
| BtgI | CCRYGG | 1 cut(s) | 1866 |
| BtgZI | GCGATG | 3 cut(s) | 5, 1260, 2216 |
| BtrI | CACGTC | 2 cut(s) | 1900, 2157 |
| BtsCI | GGATG | 8 cut(s) | 56, 113, 802, 1225, 1312, 1330, 1441, 1875 |
| BtsI | GCAGTG | 2 cut(s) | 877, 2076 |
| BtsIMutI | CAGTG | 4 cut(s) | 220, 877, 1032, 2076 |
| BveI | ACCTGC | 1 cut(s) | 2018 |
| Cac8I | GCNNGC | 8 cut(s) | 74, 203, 1068, 1449, 1770, 1820, 1886, 2196 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1661, 2065 |
| CciI | TCATGA | 1 cut(s) | 1005 |
| CfoI | GCGC | 5 cut(s) | 290, 399, 1978, 2106, 2216 |
| Cfr10I | RCCGGY | 3 cut(s) | 663, 1969, 1981 |
| Cfr13I | GGNCC | 4 cut(s) | 636, 1716, 2030, 2073 |
| ClaI | ATCGAT | 1 cut(s) | 1051 |
| CseI | GACGC | 1 cut(s) | 1922 |
| Csp6I | GTAC | 5 cut(s) | 267, 858, 1161, 1172, 1472 |
| CspAI | ACCGGT | 1 cut(s) | 663 |
| CviAII | CATG | 5 cut(s) | 118, 327, 1006, 1259, 1523 |
| CviQI | GTAC | 5 cut(s) | 267, 858, 1161, 1172, 1472 |
| DdeI | CTNAG | 4 cut(s) | 143, 194, 206, 318 |
| DpnI | GATC | 7 cut(s) | 391, 542, 730, 837, 1018, 1023, 1491 |
| DpnII | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| EaeI | YGGCCR | 3 cut(s) | 232, 874, 2043 |
| EciI | GGCGGA | 1 cut(s) | 2165 |
| Ecl136II | GAGCTC | 1 cut(s) | 76 |
| Eco130I | CCWWGG | 2 cut(s) | 514, 1845 |
| Eco24I | GRGCYC | 1 cut(s) | 78 |
| Eco47I | GGWCC | 3 cut(s) | 636, 2030, 2073 |
| Eco53kI | GAGCTC | 1 cut(s) | 76 |
| Eco57I | CTGAAG | 2 cut(s) | 1233, 1683 |
| Eco81I | CCTNAGG | 1 cut(s) | 318 |
| EcoICRI | GAGCTC | 1 cut(s) | 76 |
| EcoRII | CCWGG | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 2 cut(s) | 514, 1845 |
| EcoT38I | GRGCYC | 1 cut(s) | 78 |
| ErhI | CCWWGG | 2 cut(s) | 514, 1845 |
| Esp3I | CGTCTC | 1 cut(s) | 2147 |
| FaeI | CATG | 5 cut(s) | 121, 330, 1009, 1262, 1526 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1581, 1613 |
| FatI | CATG | 5 cut(s) | 117, 326, 1005, 1258, 1522 |
| FauI | CCCGC | 4 cut(s) | 1761, 1929, 2125, 2187 |
| FblI | GTMKAC | 1 cut(s) | 1911 |
| FokI | GGATG | 8 cut(s) | 43, 100, 809, 1232, 1319, 1337, 1448, 1862 |
| FriOI | GRGCYC | 1 cut(s) | 78 |
| FspBI | CTAG | 6 cut(s) | 255, 270, 417, 465, 681, 1637 |
| GlaI | GCGC | 5 cut(s) | 289, 398, 1977, 2105, 2215 |
| GsaI | CCCAGC | 2 cut(s) | 1447, 2223 |
| GsuI | CTGGAG | 1 cut(s) | 1902 |
| HaeIII | GGCC | 6 cut(s) | 153, 234, 876, 1717, 1928, 2045 |
| HapII | CCGG | 8 cut(s) | 664, 1758, 1793, 1889, 1970, 1982, 2033, 2144 |
| HgaI | GACGC | 1 cut(s) | 1922 |
| HhaI | GCGC | 5 cut(s) | 290, 399, 1978, 2106, 2216 |
| Hin1II | CATG | 5 cut(s) | 121, 330, 1009, 1262, 1526 |
| Hin6I | GCGC | 5 cut(s) | 288, 397, 1976, 2104, 2214 |
| HinP1I | GCGC | 5 cut(s) | 288, 397, 1976, 2104, 2214 |
| HincII | GTYRAC | 2 cut(s) | 1912, 1942 |
| HindII | GTYRAC | 2 cut(s) | 1912, 1942 |
| HindIII | AAGCTT | 2 cut(s) | 618, 1595 |
| HinfI | GANTC | 7 cut(s) | 5, 655, 1676, 1754, 1949, 1954, 2208 |
| HpaII | CCGG | 8 cut(s) | 664, 1758, 1793, 1889, 1970, 1982, 2033, 2144 |
| HphI | GGTGA | 3 cut(s) | 527, 842, 1262 |
| Hpy166II | GTNNAC | 5 cut(s) | 1472, 1912, 1942, 2076, 2138 |
| Hpy188III | TCNNGA | 8 cut(s) | 476, 491, 839, 1006, 1079, 1493, 1903, 1919 |
| Hpy8I | GTNNAC | 5 cut(s) | 1472, 1912, 1942, 2076, 2138 |
| Hpy99I | CGWCG | 1 cut(s) | 1916 |
| HpyAV | CCTTC | 7 cut(s) | 177, 896, 1174, 1208, 1310, 1375, 1617 |
| HpyCH4III | ACNGT | 2 cut(s) | 1702, 1806 |
| HpyCH4IV | ACGT | 3 cut(s) | 280, 1899, 2156 |
| HpyCH4V | TGCA | 8 cut(s) | 523, 758, 787, 1186, 1487, 1670, 1863, 2109 |
| HpyF3I | CTNAG | 4 cut(s) | 143, 194, 206, 318 |
| HpySE526I | ACGT | 3 cut(s) | 280, 1899, 2156 |
| Hsp92II | CATG | 5 cut(s) | 121, 330, 1009, 1262, 1526 |
| HspAI | GCGC | 5 cut(s) | 288, 397, 1976, 2104, 2214 |
| Kzo9I | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| LguI | GCTCTTC | 1 cut(s) | 83 |
| LmnI | GCTCC | 4 cut(s) | 1078, 1891, 1921, 2182 |
| Lsp1109I | GCAGC | 9 cut(s) | 51, 411, 513, 1024, 1057, 1357, 1948, 1990, 2093 |
| LweI | GCATC | 3 cut(s) | 231, 1053, 1871 |
| MaeI | CTAG | 6 cut(s) | 255, 270, 417, 465, 681, 1637 |
| MaeII | ACGT | 3 cut(s) | 280, 1899, 2156 |
| MaeIII | GTNAC | 4 cut(s) | 322, 533, 1438, 1702 |
| MalI | GATC | 7 cut(s) | 391, 542, 730, 837, 1018, 1023, 1491 |
| MboI | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| MfeI | CAATTG | 1 cut(s) | 1748 |
| MflI | RGATCY | 3 cut(s) | 389, 1016, 1489 |
| MhlI | GDGCHC | 2 cut(s) | 78, 452 |
| MlsI | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| MluCI | AATT | 6 cut(s) | 381, 1283, 1430, 1505, 1748, 1826 |
| MluNI | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| MlyI | GAGTC | 3 cut(s) | 14, 1943, 2217 |
| MmeI | TCCRAC | 1 cut(s) | 1176 |
| Mox20I | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| MscI | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| MseI | TTAA | 2 cut(s) | 645, 1808 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1527 |
| Msp20I | TGGCCA | 3 cut(s) | 234, 876, 2045 |
| MspI | CCGG | 8 cut(s) | 664, 1758, 1793, 1889, 1970, 1982, 2033, 2144 |
| MspR9I | CCNGG | 3 cut(s) | 150, 1759, 2144 |
| MunI | CAATTG | 1 cut(s) | 1748 |
| Mva1269I | GAATGC | 3 cut(s) | 569, 997, 1394 |
| MvaI | CCWGG | 1 cut(s) | 150 |
| MvnI | CGCG | 2 cut(s) | 2104, 2216 |
| NciI | CCSGG | 2 cut(s) | 1759, 2144 |
| NdeII | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| NlaIII | CATG | 5 cut(s) | 121, 330, 1009, 1262, 1526 |
| NlaIV | GGNNCC | 5 cut(s) | 581, 637, 1968, 2074, 2184 |
| NmeAIII | GCCGAG | 2 cut(s) | 179, 2022 |
| NmuCI | GTSAC | 2 cut(s) | 322, 533 |
| NspI | RCATGY | 1 cut(s) | 330 |
| PagI | TCATGA | 1 cut(s) | 1005 |
| PciI | ACATGT | 1 cut(s) | 326 |
| PciSI | GCTCTTC | 1 cut(s) | 83 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2009, 2045 |
| PctI | GAATGC | 3 cut(s) | 569, 997, 1394 |
| PfeI | GAWTC | 4 cut(s) | 655, 1676, 1754, 1954 |
| PinAI | ACCGGT | 1 cut(s) | 663 |
| PleI | GAGTC | 3 cut(s) | 13, 1943, 2216 |
| PpsI | GAGTC | 3 cut(s) | 13, 1943, 2216 |
| PscI | ACATGT | 1 cut(s) | 326 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1119 |
| Psp124BI | GAGCTC | 1 cut(s) | 78 |
| Psp6I | CCWGG | 1 cut(s) | 148 |
| PspFI | CCCAGC | 2 cut(s) | 1443, 2219 |
| PspGI | CCWGG | 1 cut(s) | 148 |
| PspN4I | GGNNCC | 5 cut(s) | 581, 637, 1968, 2074, 2184 |
| PspPI | GGNCC | 4 cut(s) | 636, 1716, 2030, 2073 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1661, 2065 |
| PsuI | RGATCY | 3 cut(s) | 389, 1016, 1489 |
| RsaI | GTAC | 5 cut(s) | 268, 859, 1162, 1173, 1473 |
| RsaNI | GTAC | 5 cut(s) | 267, 858, 1161, 1172, 1472 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1527 |
| SacI | GAGCTC | 1 cut(s) | 78 |
| SalI | GTCGAC | 1 cut(s) | 1910 |
| SapI | GCTCTTC | 1 cut(s) | 83 |
| SaqAI | TTAA | 2 cut(s) | 645, 1808 |
| Sau3AI | GATC | 7 cut(s) | 389, 540, 728, 835, 1016, 1021, 1489 |
| Sau96I | GGNCC | 4 cut(s) | 636, 1716, 2030, 2073 |
| ScaI | AGTACT | 2 cut(s) | 859, 1173 |
| SchI | GAGTC | 3 cut(s) | 14, 1943, 2217 |
| ScrFI | CCNGG | 3 cut(s) | 150, 1759, 2144 |
| SduI | GDGCHC | 2 cut(s) | 78, 452 |
| SfaNI | GCATC | 3 cut(s) | 231, 1053, 1871 |
| SfcI | CTRYAG | 1 cut(s) | 1536 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1969 |
| SinI | GGWCC | 3 cut(s) | 636, 2030, 2073 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1527 |
| SmlI | CTYRAG | 3 cut(s) | 568, 1077, 1175 |
| SmoI | CTYRAG | 3 cut(s) | 568, 1077, 1175 |
| SpeI | ACTAGT | 1 cut(s) | 269 |
| Sse9I | AATT | 6 cut(s) | 381, 1283, 1430, 1505, 1748, 1826 |
| SspMI | CTAG | 6 cut(s) | 255, 270, 417, 465, 681, 1637 |
| SstI | GAGCTC | 1 cut(s) | 78 |
| StyD4I | CCNGG | 3 cut(s) | 148, 1757, 2142 |
| StyI | CCWWGG | 2 cut(s) | 514, 1845 |
| TaaI | ACNGT | 2 cut(s) | 1702, 1806 |
| TaiI | ACGT | 3 cut(s) | 283, 1902, 2159 |
| TaqI | TCGA | 7 cut(s) | 490, 1051, 1763, 1911, 1947, 1952, 2039 |
| TaqII | GACCGA | 1 cut(s) | 1774 |
| TasI | AATT | 6 cut(s) | 381, 1283, 1430, 1505, 1748, 1826 |
| TatI | WGTACW | 3 cut(s) | 857, 1171, 1471 |
| TauI | GCSGC | 8 cut(s) | 201, 1967, 1976, 1996, 2150, 2188, 2201, 2219 |
| TfiI | GAWTC | 4 cut(s) | 655, 1676, 1754, 1954 |
| Tru1I | TTAA | 2 cut(s) | 645, 1808 |
| Tru9I | TTAA | 2 cut(s) | 645, 1808 |
| TscAI | CASTG | 4 cut(s) | 220, 877, 1032, 2083 |
| TseFI | GTSAC | 2 cut(s) | 322, 533 |
| TseI | GCWGC | 9 cut(s) | 39, 399, 501, 1037, 1070, 1345, 1961, 1978, 2106 |
| Tsp45I | GTSAC | 2 cut(s) | 322, 533 |
| TspGWI | ACGGA | 1 cut(s) | 1883 |
| TspRI | CASTG | 4 cut(s) | 220, 877, 1032, 2083 |
| VpaK11BI | GGWCC | 3 cut(s) | 636, 2030, 2073 |
| XapI | RAATTY | 1 cut(s) | 1505 |
| XceI | RCATGY | 1 cut(s) | 330 |
| XmiI | GTMKAC | 1 cut(s) | 1911 |
| XspI | CTAG | 6 cut(s) | 255, 270, 417, 465, 681, 1637 |
| ZrmI | AGTACT | 2 cut(s) | 859, 1173 |