Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0009342

Physical Location & Seq

Genomic Coordinates Forward (+)

26920644 .. 26923671

Gene Structure 3028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G020410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGATGGTGGAGTCAGAGAGACCCCATCGCAGCAAGAGTAGCAGCGGAACCACGAGCGAGCTCTTCATTTGCTTCAGCACTTCTCGCCTCTCCTCTTCTTCATCCATGAAGCTCTCTTCCAAGTCCCTACTCAGCCCGGGCCGTACTCGAGACCAGACCCCCCAAATCTCGCTCTCTTCCTCTCTCAGCCGCCGCCTCAGAACCAGCAGCAGCATTAAAGGCGGCGCCTCTCCGATGTTCCCGAGCGGCGGCGGCGGCGGAAGTAAGAAGCGAGGCGGGTTCGAAAACCCGGAGCCTTCGTCTCCCAAAGTGACGTGTATTGGGCAGGTGAGGGTGAAGACGAAGAAGCAGGGGAAGAAGATGAGGATGATAAGTAGCAGATCGAAGCGGAGCAGGAGCGGCAGCGGCGTCGGCGGAGCCGAGGCGAGTTTCCGAAAAGCGGAGCAGAGTGTTAACCAACATGAAAGTTTCCAAGCACTTCATTTTCCGACTCACCAGATGAGTAGCAGCAGCCAGAGGGAGTGCTTGCGGCAGAGGAATAACCAGAGGTGGGTGCATCTTCCTTTAACCATTTGCGAGGCGTTGAGGGCTTTCGGGTCGGAGTTTAACTGCCTGATTCCGAATAAGTCGTCGTGTTTGAGCGGCGGCGAGGCGAAGAAGGATGAGGATAACAAAGGGGTGAGATCGGAGAGTGGGAATAGCTCGTGTGGGGCAGTGTTTGCGAGGTGGTTTGTGGCGTTGGGAGATGGGGAGGATGGGAATAAGAGGAGGGAGATAGAGTTGGTGGTGGGGGAAGAAGAAGAAGAGGAAGAGAGAACGGAGATGAGCAGTGGGAGCCATAGTTTGAGGAGGCAAGTTTTTGAAGGGATTGAGTTTAAAGAAGAGATAGTGAGTGAGGCTTTGATGAGGGAAGAAGAGGAAGGTAGAGTTAGTTTGTGTGTTCCGCCCAAGAATGCGCTTTTACTCATGAGGTGTAGATCTGATCCGGTGAAGATGGCGGCGCTCGGGAATCGGTTTTGGGAAATGCCGGCCGCTCCGAAAGAGGAAGTGAGTGAAGATGAAGATGAGGATGAGGGTCTTGAAGAGAAAGAGAAACCACATGAAGAAAAGGAGAAGGGGCAAATTGGATTACAAACAGACGCTAAGCTTTTTGGAGACGATGGTATGTGTGAGAAATGGGTTTTGGATGGCGAAGATGTAGAAGAACAAGAAGAAAAAGAAGAGGAATTGAGTTTGGTTTTAGAGGATGAGAAACCAGAGCAAAGTGAGAGCCTGTATGAGCAACCAGAGGTAGTAGTAGAAGGAAAGGAATGCCGAGAAGAAGAGCCAGATCGAGAGGAAAATACGAATGAGCCAGCATTGGTAGAAGAAGCTGTGCTGGATTCTTCTCTAGCTGAATTTTTTGCAGATCCAGAAATGTCTGAAGTTGAAGAAATGGGGTTACAATTTGAAGAAGCACATGAAGAACAGAGAGAAGAGGAAATGAGAGAAGTAGAGCTTTCAATATCAGAAGAAGAACAGGAAGAAGAAGAAGAAGAAGCAGAGTCTTGGGCTGAAACTGAAGCAGAGGTGACAGAGGACTCAACGGCGGAGGAAGAGAAGGAGTCCAGAGAGAGTACTTGGGAAGAAGCAGAAGAGAGTCGAGCGATAGTGACCCAAGATAGACCCGAACCCGAATGCGAGCGCCCGAAGGCCCAAACGGGTCTCCAACCGAAACCGTCAAATCAAAACCAGGTCTTACCGGACTGTTTGCTGCTAATGATGTGCGAGCCGAAGCTATCCATGGAGGTATCCAAGGAGACTTGGGTTTGCAGCACGGACTTCATCCGATGCCTCCCGGAGCGACACGTCAGCAGCAACAAAAAGGAAGGCAAGGATGAGGCGAAGAAGCCGCCGCGGGTCAGCATAGATTCGAAAGCCTCGAAGCCGGCGGCGGCTCAGCAGCAGCCGATGATTCAGCCGCCGAGGTCGTCTTGTTCTTTTCCGATACAAGCGGGCGGGGGTCCGGTTTCGATGGCCGAGATCATAGGGCAGAAGCTGGTTGGGTCTACTGCCTATGAGCCGTTTGTGCTCACGCGCTGCAAGTCGGAGCCGATGAGGTCGGCGGCTAAACTTGCGCCGGAGGCTTGCTTTTGGAAGAACAGGAAGCACGAGCCGCATCGCCACCCGGGTCCGCTCGGAGTCGGGGCGACCGGAGTCGGGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

735

Amino Acids

81.92

Weight (kDa)

4.84

Isoelectric Point (pI)

77.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15095 AT3G15095 AT3G15095
fragaria_vesca	FvH4_3g19150 FvH4_3g19150
malus_domestica	MD03G1236100.v1.1 MD11G1256900.v1.1
prunus_persica	Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1
pyrus_communis	pycom03g18230 pycom11g22700
rosa_chinensis	RchiOBHm_Chr5g0032241
rosa_laevigata	RLG00000033370
rosa_multiflora	Rmu_sc0018683.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048220
rosa_rugosa	Rorug05G0129900
rosa_samantha	Rh5AG223800 Rh5BG224500 Rh5CG249800 Rh5DG229100
rosa_wichuraiana	Rw5G020410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	316
Acc36I	ACCTGC	1 cut(s)	316
AccB1I	GGYRCC	1 cut(s)	224
AccBSI	CCGCTC	5 cut(s)	246, 399, 642, 1034, 2176
AccI	GTMKAC	1 cut(s)	2048
AccII	CGCG	2 cut(s)	1897, 2077
AclWI	GGATC	2 cut(s)	977, 1403
AcoI	YGGCCR	2 cut(s)	1029, 2016
AcsI	RAATTY	1 cut(s)	1397
AcuI	CTGAAG	3 cut(s)	58, 1443, 1581
AcyI	GRCGYC	2 cut(s)	225, 408
AfaI	GTAC	2 cut(s)	145, 1618
AfiI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
AflIII	ACRYGT	2 cut(s)	314, 1846
AgsI	TTSAA	5 cut(s)	863, 1082, 1430, 1451, 1503
AjiI	CACGTC	2 cut(s)	315, 1849
AjnI	CCWGG	1 cut(s)	1731
AjuI	GAANNNNNNNTTGG	2 cut(s)	1166, 1198
AluBI	AGCT	9 cut(s)	61, 112, 702, 1147, 1373, 1394, 1498, 1777, 2038
AluI	AGCT	9 cut(s)	61, 112, 702, 1147, 1373, 1394, 1498, 1777, 2038
Alw21I	GWGCWC	2 cut(s)	63, 2073
Alw26I	GTCTC	6 cut(s)	13, 144, 306, 1149, 1709, 1793
AlwI	GGATC	2 cut(s)	977, 1403
AlwNI	CAGNNNCTG	1 cut(s)	2038
Ama87I	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
AoxI	GGCC	4 cut(s)	139, 1029, 1692, 2016
ApoI	RAATTY	1 cut(s)	1397
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AspLEI	GCGC	6 cut(s)	227, 958, 1003, 1686, 2079, 2119
AspS9I	GGNCC	4 cut(s)	139, 1693, 2003, 2171
AsuC2I	CCSGG	6 cut(s)	137, 138, 290, 1838, 2168, 2169
AsuHPI	GGTGA	6 cut(s)	340, 346, 485, 691, 1000, 1582
AsuII	TTCGAA	2 cut(s)	282, 1913
AvaI	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
AvaII	GGWCC	2 cut(s)	2003, 2171
BanI	GGYRCC	1 cut(s)	224
BanII	GRGCYC	1 cut(s)	63
BauI	CACGAG	3 cut(s)	52, 703, 2150
BbsI	GAAGAC	1 cut(s)	344
Bbv12I	GWGCWC	2 cut(s)	63, 2073
BccI	CCATC	7 cut(s)	33, 740, 749, 988, 1154, 1181, 2008
BceAI	ACGGC	3 cut(s)	126, 1602, 2047
BcgI	CGANNNNNNTGC	2 cut(s)	391, 425
BciT130I	CCWGG	1 cut(s)	1733
BciVI	GTATCC	1 cut(s)	1801
BcnI	CCSGG	6 cut(s)	137, 138, 290, 1838, 2168, 2169
BcoDI	GTCTC	6 cut(s)	13, 144, 306, 1149, 1709, 1793
BfaI	CTAG	1 cut(s)	1391
BfoI	RGCGCY	3 cut(s)	228, 1004, 1687
BfuAI	ACCTGC	1 cut(s)	316
BfuI	GTATCC	1 cut(s)	1801
BglII	AGATCT	1 cut(s)	977
BlpI	GCTNAGC	2 cut(s)	1143, 1938
BmcAI	AGTACT	1 cut(s)	1618
Bme1390I	CCNGG	7 cut(s)	137, 138, 290, 1733, 1838, 2168, 2169
Bme18I	GGWCC	2 cut(s)	2003, 2171
BmeT110I	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
BmgBI	CACGTC	2 cut(s)	315, 1849
BmgT120I	GGNCC	4 cut(s)	139, 1693, 2003, 2171
BmiI	GGNNCC	8 cut(s)	49, 226, 294, 418, 836, 2004, 2091, 2172
BmrFI	CCNGG	7 cut(s)	137, 138, 290, 1733, 1838, 2168, 2169
BmsI	GCATC	3 cut(s)	565, 1820, 2167
BoxI	GACNNNNGTC	1 cut(s)	2195
BpiI	GAAGAC	1 cut(s)	344
Bpu1102I	GCTNAGC	2 cut(s)	1143, 1938
Bpu14I	TTCGAA	2 cut(s)	282, 1913
BpuMI	CCSGG	6 cut(s)	137, 138, 290, 1838, 2168, 2169
BsaHI	GRCGYC	2 cut(s)	225, 408
BsaI	GGTCTC	3 cut(s)	13, 144, 1709
BsaJI	CCNNGG	7 cut(s)	136, 420, 1782, 1794, 1895, 1964, 2167
BsaWI	WCCGGW	4 cut(s)	985, 1741, 2005, 2192
BsaXI	ACNNNNNCTCC	6 cut(s)	284, 314, 764, 794, 826, 856
Bsc4I	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
Bse118I	RCCGGY	2 cut(s)	1027, 1927
BseBI	CCWGG	1 cut(s)	1733
BseDI	CCNNGG	7 cut(s)	136, 420, 1782, 1794, 1895, 1964, 2167
BseGI	GGATG	9 cut(s)	101, 372, 667, 760, 1075, 1192, 1252, 1824, 1882
BseLI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
BseMII	CTCAG	4 cut(s)	145, 199, 211, 1952
BseRI	GAGGAG	3 cut(s)	82, 781, 862
BseX3I	CGGCCG	1 cut(s)	1029
Bsh1236I	CGCG	2 cut(s)	1897, 2077
Bsh1285I	CGRYCG	2 cut(s)	1032, 2193
BshFI	GGCC	4 cut(s)	141, 1031, 1694, 2018
BshNI	GGYRCC	1 cut(s)	224
BsiEI	CGRYCG	2 cut(s)	1032, 2193
BsiHKAI	GWGCWC	2 cut(s)	63, 2073
BsiHKCI	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
BslFI	GGGAC	1 cut(s)	109
BslI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
BsmAI	GTCTC	6 cut(s)	13, 144, 306, 1149, 1709, 1793
BsmBI	CGTCTC	2 cut(s)	306, 1149
BsmFI	GGGAC	1 cut(s)	109
BsmI	GAATGC	3 cut(s)	958, 1316, 1682
BsnI	GGCC	4 cut(s)	141, 1031, 1694, 2018
Bso31I	GGTCTC	3 cut(s)	13, 144, 1709
BsoBI	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
Bsp119I	TTCGAA	2 cut(s)	282, 1913
Bsp1286I	GDGCHC	2 cut(s)	63, 2073
Bsp143I	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
Bsp1720I	GCTNAGC	2 cut(s)	1143, 1938
Bsp19I	CCATGG	1 cut(s)	1782
BspANI	GGCC	4 cut(s)	141, 1031, 1694, 2018
BspCNI	CTCAG	4 cut(s)	144, 198, 210, 1951
BspFNI	CGCG	2 cut(s)	1897, 2077
BspHI	TCATGA	1 cut(s)	966
BspLI	GGNNCC	8 cut(s)	49, 226, 294, 418, 836, 2004, 2091, 2172
BspMI	ACCTGC	1 cut(s)	316
BspPI	GGATC	2 cut(s)	977, 1403
BspQI	GCTCTTC	2 cut(s)	68, 1317
BspT104I	TTCGAA	2 cut(s)	282, 1913
BspT107I	GGYRCC	1 cut(s)	224
BspTNI	GGTCTC	3 cut(s)	13, 144, 1709
BsrBI	CCGCTC	5 cut(s)	246, 399, 642, 1034, 2176
BsrFI	RCCGGY	2 cut(s)	1027, 1927
BssAI	RCCGGY	2 cut(s)	1027, 1927
BssECI	CCNNGG	7 cut(s)	136, 420, 1782, 1794, 1895, 1964, 2167
BssMI	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
BssNI	GRCGYC	2 cut(s)	225, 408
BssSI	CACGAG	3 cut(s)	52, 703, 2150
BssT1I	CCWWGG	2 cut(s)	1782, 1794
Bst2BI	CACGAG	3 cut(s)	52, 703, 2150
Bst2UI	CCWGG	1 cut(s)	1733
Bst4CI	ACNGT	2 cut(s)	1719, 1748
BstACI	GRCGYC	2 cut(s)	225, 408
BstAPI	GCANNNNNTGC	1 cut(s)	719
BstBI	TTCGAA	2 cut(s)	282, 1913
BstC8I	GCNNGC	9 cut(s)	59, 527, 1029, 1356, 1682, 1769, 1929, 1996, 2128
BstDEI	CTNAG	5 cut(s)	131, 185, 197, 1143, 1938
BstDSI	CCRYGG	2 cut(s)	1782, 1895
BstF5I	GGATG	9 cut(s)	101, 372, 667, 760, 1075, 1192, 1252, 1824, 1882
BstFNI	CGCG	2 cut(s)	1897, 2077
BstH2I	RGCGCY	3 cut(s)	228, 1004, 1687
BstHHI	GCGC	6 cut(s)	227, 958, 1003, 1686, 2079, 2119
BstKTI	GATC	7 cut(s)	383, 686, 980, 985, 1333, 1411, 2025
BstMAI	GTCTC	6 cut(s)	13, 144, 306, 1149, 1709, 1793
BstMBI	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
BstMCI	CGRYCG	2 cut(s)	1032, 2193
BstNI	CCWGG	1 cut(s)	1733
BstPAI	GACNNNNGTC	1 cut(s)	2195
BstSCI	CCNGG	7 cut(s)	135, 136, 288, 1731, 1836, 2166, 2167
BstUI	CGCG	2 cut(s)	1897, 2077
BstV2I	GAAGAC	1 cut(s)	344
BstX2I	RGATCY	2 cut(s)	977, 1408
BstYI	RGATCY	2 cut(s)	977, 1408
BstZI	CGGCCG	1 cut(s)	1029
BsuI	GTATCC	1 cut(s)	1801
BsuRI	GGCC	4 cut(s)	141, 1031, 1694, 2018
BtgI	CCRYGG	2 cut(s)	1782, 1895
BtgZI	GCGATG	2 cut(s)	11, 2144
BtrI	CACGTC	2 cut(s)	315, 1849
BtsCI	GGATG	9 cut(s)	101, 372, 667, 760, 1075, 1192, 1252, 1824, 1882
BtsI	GCAGTG	2 cut(s)	720, 835
BtsIMutI	CAGTG	2 cut(s)	720, 835
BveI	ACCTGC	1 cut(s)	316
Cac8I	GCNNGC	9 cut(s)	59, 527, 1029, 1356, 1682, 1769, 1929, 1996, 2128
CaiI	CAGNNNCTG	1 cut(s)	2038
CciI	TCATGA	1 cut(s)	966
CfoI	GCGC	6 cut(s)	227, 958, 1003, 1686, 2079, 2119
Cfr10I	RCCGGY	2 cut(s)	1027, 1927
Cfr13I	GGNCC	4 cut(s)	139, 1693, 2003, 2171
Cfr42I	CCGCGG	1 cut(s)	1898
Cfr9I	CCCGGG	2 cut(s)	136, 2167
CseI	GACGC	2 cut(s)	397, 1148
CsiI	ACCWGGT	1 cut(s)	1731
Csp6I	GTAC	2 cut(s)	144, 1617
CviAII	CATG	6 cut(s)	106, 461, 967, 1100, 1460, 1783
CviQI	GTAC	2 cut(s)	144, 1617
DdeI	CTNAG	5 cut(s)	131, 185, 197, 1143, 1938
DinI	GGCGCC	1 cut(s)	226
DpnI	GATC	7 cut(s)	382, 685, 979, 984, 1332, 1410, 2024
DpnII	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
DraI	TTTAAA	1 cut(s)	877
EaeI	YGGCCR	2 cut(s)	1029, 2016
EagI	CGGCCG	1 cut(s)	1029
EciI	GGCGGA	4 cut(s)	273, 429, 933, 1604
Ecl136II	GAGCTC	1 cut(s)	61
EclXI	CGGCCG	1 cut(s)	1029
Eco130I	CCWWGG	2 cut(s)	1782, 1794
Eco24I	GRGCYC	1 cut(s)	63
Eco31I	GGTCTC	3 cut(s)	13, 144, 1709
Eco47I	GGWCC	2 cut(s)	2003, 2171
Eco52I	CGGCCG	1 cut(s)	1029
Eco53kI	GAGCTC	1 cut(s)	61
Eco57I	CTGAAG	3 cut(s)	58, 1443, 1581
Eco88I	CYCGRG	5 cut(s)	136, 147, 241, 1004, 2167
EcoICRI	GAGCTC	1 cut(s)	61
EcoRII	CCWGG	1 cut(s)	1731
EcoT14I	CCWWGG	2 cut(s)	1782, 1794
EcoT38I	GRGCYC	1 cut(s)	63
EgeI	GGCGCC	1 cut(s)	226
EheI	GGCGCC	1 cut(s)	226
ErhI	CCWWGG	2 cut(s)	1782, 1794
Esp3I	CGTCTC	2 cut(s)	306, 1149
FaeI	CATG	6 cut(s)	109, 464, 970, 1103, 1463, 1786
FalI	AAGNNNNNCTT	2 cut(s)	1482, 1514
FaqI	GGGAC	1 cut(s)	109
FatI	CATG	6 cut(s)	105, 460, 966, 1099, 1459, 1782
FauI	CCCGC	4 cut(s)	269, 1890, 1987, 1991
FblI	GTMKAC	1 cut(s)	2048
FokI	GGATG	9 cut(s)	88, 379, 674, 767, 1082, 1199, 1259, 1811, 1889
FriOI	GRGCYC	1 cut(s)	63
FspBI	CTAG	1 cut(s)	1391
GlaI	GCGC	6 cut(s)	226, 957, 1002, 1685, 2078, 2118
HaeII	RGCGCY	3 cut(s)	228, 1004, 1687
HaeIII	GGCC	4 cut(s)	141, 1031, 1694, 2018
HgaI	GACGC	2 cut(s)	397, 1148
HhaI	GCGC	6 cut(s)	227, 958, 1003, 1686, 2079, 2119
Hin1I	GRCGYC	2 cut(s)	225, 408
Hin1II	CATG	6 cut(s)	109, 464, 970, 1103, 1463, 1786
Hin6I	GCGC	6 cut(s)	225, 956, 1001, 1684, 2077, 2117
HinP1I	GCGC	6 cut(s)	225, 956, 1001, 1684, 2077, 2117
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	1 cut(s)	1145
HpaI	GTTAAC	1 cut(s)	454
HphI	GGTGA	6 cut(s)	340, 346, 485, 691, 1000, 1582
Hpy166II	GTNNAC	2 cut(s)	454, 2049
Hpy188III	TCNNGA	8 cut(s)	149, 241, 967, 1006, 1079, 1334, 1412, 1608
Hpy8I	GTNNAC	2 cut(s)	454, 2049
Hpy99I	CGWCG	2 cut(s)	413, 634
HpyAV	CCTTC	9 cut(s)	306, 652, 857, 914, 1108, 1295, 1594, 1684, 1862
HpyCH4III	ACNGT	2 cut(s)	1719, 1748
HpyCH4IV	ACGT	2 cut(s)	314, 1848
HpyCH4V	TGCA	4 cut(s)	556, 1406, 1812, 2082
HpyF3I	CTNAG	5 cut(s)	131, 185, 197, 1143, 1938
HpySE526I	ACGT	2 cut(s)	314, 1848
Hsp92I	GRCGYC	2 cut(s)	225, 408
Hsp92II	CATG	6 cut(s)	109, 464, 970, 1103, 1463, 1786
HspAI	GCGC	6 cut(s)	225, 956, 1001, 1684, 2077, 2117
KasI	GGCGCC	1 cut(s)	224
KroI	GCCGGC	2 cut(s)	1027, 1927
KroNI	GCCGGC	2 cut(s)	1029, 1929
KspAI	GTTAAC	1 cut(s)	454
KspI	CCGCGG	1 cut(s)	1898
Kzo9I	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
LguI	GCTCTTC	2 cut(s)	68, 1317
LmnI	GCTCC	9 cut(s)	292, 390, 396, 416, 442, 834, 1039, 1840, 2089
LweI	GCATC	3 cut(s)	565, 1820, 2167
MabI	ACCWGGT	1 cut(s)	1731
MaeI	CTAG	1 cut(s)	1391
MaeII	ACGT	2 cut(s)	314, 1848
MaeIII	GTNAC	4 cut(s)	310, 1440, 1570, 1651
MalI	GATC	7 cut(s)	382, 685, 979, 984, 1332, 1410, 2024
MbiI	CCGCTC	5 cut(s)	246, 399, 642, 1034, 2176
MboI	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
MflI	RGATCY	2 cut(s)	977, 1408
MhlI	GDGCHC	2 cut(s)	63, 2073
MluCI	AATT	4 cut(s)	1122, 1226, 1397, 1445
Mly113I	GGCGCC	1 cut(s)	225
MlyI	GAGTC	8 cut(s)	20, 484, 1553, 1574, 1613, 1648, 2190, 2205
MmeI	TCCRAC	4 cut(s)	512, 579, 1732, 2067
MroNI	GCCGGC	2 cut(s)	1027, 1927
MseI	TTAA	6 cut(s)	216, 453, 566, 606, 876, 2206
MspA1I	CMGCKG	3 cut(s)	45, 405, 1897
MspR9I	CCNGG	7 cut(s)	137, 138, 290, 1733, 1838, 2168, 2169
Mva1269I	GAATGC	3 cut(s)	958, 1316, 1682
MvaI	CCWGG	1 cut(s)	1733
MvnI	CGCG	2 cut(s)	1897, 2077
NaeI	GCCGGC	2 cut(s)	1029, 1929
NarI	GGCGCC	1 cut(s)	225
NciI	CCSGG	6 cut(s)	137, 138, 290, 1838, 2168, 2169
NcoI	CCATGG	1 cut(s)	1782
NdeII	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
NgoMIV	GCCGGC	2 cut(s)	1027, 1927
NlaIII	CATG	6 cut(s)	109, 464, 970, 1103, 1463, 1786
NlaIV	GGNNCC	8 cut(s)	49, 226, 294, 418, 836, 2004, 2091, 2172
NmeAIII	GCCGAG	4 cut(s)	445, 1340, 1989, 2044
NmuCI	GTSAC	3 cut(s)	310, 1570, 1651
NspV	TTCGAA	2 cut(s)	282, 1913
PaeR7I	CTCGAG	1 cut(s)	147
PagI	TCATGA	1 cut(s)	966
PaqCI	CACCTGC	1 cut(s)	316
PciSI	GCTCTTC	2 cut(s)	68, 1317
PcsI	WCGNNNNNNNCGW	2 cut(s)	417, 1919
PctI	GAATGC	3 cut(s)	958, 1316, 1682
PdiI	GCCGGC	2 cut(s)	1029, 1929
PfeI	GAWTC	5 cut(s)	616, 1009, 1382, 1910, 1954
PfoI	TCCNGGA	1 cut(s)	1836
PleI	GAGTC	8 cut(s)	19, 484, 1552, 1574, 1612, 1647, 2189, 2204
PluTI	GGCGCC	1 cut(s)	228
PpsI	GAGTC	8 cut(s)	19, 484, 1552, 1574, 1612, 1647, 2189, 2204
PshAI	GACNNNNGTC	1 cut(s)	2195
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	1 cut(s)	1731
PspGI	CCWGG	1 cut(s)	1731
PspN4I	GGNNCC	8 cut(s)	49, 226, 294, 418, 836, 2004, 2091, 2172
PspPI	GGNCC	4 cut(s)	139, 1693, 2003, 2171
PstNI	CAGNNNCTG	1 cut(s)	2038
PsuI	RGATCY	2 cut(s)	977, 1408
RsaI	GTAC	2 cut(s)	145, 1618
RsaNI	GTAC	2 cut(s)	144, 1617
SacI	GAGCTC	1 cut(s)	63
SacII	CCGCGG	1 cut(s)	1898
SapI	GCTCTTC	2 cut(s)	68, 1317
SaqAI	TTAA	6 cut(s)	216, 453, 566, 606, 876, 2206
Sau3AI	GATC	7 cut(s)	380, 683, 977, 982, 1330, 1408, 2022
Sau96I	GGNCC	4 cut(s)	139, 1693, 2003, 2171
ScaI	AGTACT	1 cut(s)	1618
SchI	GAGTC	8 cut(s)	20, 484, 1553, 1574, 1613, 1648, 2190, 2205
ScrFI	CCNGG	7 cut(s)	137, 138, 290, 1733, 1838, 2168, 2169
SduI	GDGCHC	2 cut(s)	63, 2073
SexAI	ACCWGGT	1 cut(s)	1731
SfaNI	GCATC	3 cut(s)	565, 1820, 2167
SfoI	GGCGCC	1 cut(s)	226
Sfr274I	CTCGAG	1 cut(s)	147
Sfr303I	CCGCGG	1 cut(s)	1898
SfuI	TTCGAA	2 cut(s)	282, 1913
SgrBI	CCGCGG	1 cut(s)	1898
SinI	GGWCC	2 cut(s)	2003, 2171
SlaI	CTCGAG	1 cut(s)	147
SmaI	CCCGGG	2 cut(s)	138, 2169
SmlI	CTYRAG	1 cut(s)	147
SmoI	CTYRAG	1 cut(s)	147
SrfI	GCCCGGGC	1 cut(s)	138
Sse9I	AATT	4 cut(s)	1122, 1226, 1397, 1445
SspDI	GGCGCC	1 cut(s)	224
SspMI	CTAG	1 cut(s)	1391
SstI	GAGCTC	1 cut(s)	63
StyD4I	CCNGG	7 cut(s)	135, 136, 288, 1731, 1836, 2166, 2167
StyI	CCWWGG	2 cut(s)	1782, 1794
TaaI	ACNGT	2 cut(s)	1719, 1748
TaiI	ACGT	2 cut(s)	317, 1851
TaqI	TCGA	8 cut(s)	148, 282, 383, 1333, 1642, 1913, 1922, 2012
TasI	AATT	4 cut(s)	1122, 1226, 1397, 1445
TatI	WGTACW	1 cut(s)	1616
TfiI	GAWTC	5 cut(s)	616, 1009, 1382, 1910, 1954
Tru1I	TTAA	6 cut(s)	216, 453, 566, 606, 876, 2206
Tru9I	TTAA	6 cut(s)	216, 453, 566, 606, 876, 2206
TscAI	CASTG	2 cut(s)	720, 835
TseFI	GTSAC	3 cut(s)	310, 1570, 1651
Tsp45I	GTSAC	3 cut(s)	310, 1570, 1651
TspDTI	ATGAA	9 cut(s)	55, 90, 122, 470, 477, 1074, 1116, 1476, 1813
TspGWI	ACGGA	2 cut(s)	833, 1832
TspMI	CCCGGG	2 cut(s)	136, 2167
TspRI	CASTG	2 cut(s)	720, 835
VpaK11BI	GGWCC	2 cut(s)	2003, 2171
XapI	RAATTY	1 cut(s)	1397
XhoI	CTCGAG	1 cut(s)	147
XmaI	CCCGGG	2 cut(s)	136, 2167
XmiI	GTMKAC	1 cut(s)	2048
XspI	CTAG	1 cut(s)	1391
ZrmI	AGTACT	1 cut(s)	1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.