Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009342

Physical Location & Seq

Genomic Coordinates Forward (+)

26335560 .. 26338571

Gene Structure 3012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG249800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGATGGTGGAGTCAGAGAGACCCCATCGCAGCAAGAGTAGCAGCGGAACCACGAGCGAGCTCTTCATTTGCTTCAGCACTTCTCGCCTCTCCTCTTCTTCATCCATGAAGCTCTCTTCCAAGTCCCTACTCAGCCCGGGCCGTACTCGAGACCAGACCCCCCAAATCTCGCTCTCTTCCTCTCTCAGCCGCCGCCTCAGAACCAGCAGCAGCATCAAAGGCGGCGCCTCTCCGATGTTCCCGAGCGGCGGCGGCGGCGGAAGTAAGAAGCGAGGCGGGTTCGAAAACCCGGAGCCTTCGTCTCCCAAAGTGACGTGTATTGGGCAGGTGAGGGTGAAGACGAAGAAGCAGGGGAAGAAGATGAGGATGATAAGCAGCCGATCGAAGCGGAGCAGGAGTGGCAGCGGCGTCGGCGGAGCCGAGGCGAGTTTCCGAAAAGCGGAGCAGAGTGTTAACCAACATGAAAGTTTCCAAGCACTTCATTTTCCGACTCACCAGATGAGTAGCAGCAGCCAGAGGGAGTGCTTGCGGCAGAGGAATAACCAGAGGTGGGTGCATCTTCCTTTAACCATTTGCGAGGCGTTGAGGGCTTTCGGGTCGGAGTTTAACTGCCTGATTCCGAATAAGTCGTCGTGTTTGAGCGGCGGCGAGGCGAAGAAGGATGAGGAGAACAAAGGGGTGAGATCGGAGAGTGGGAATAGCTCGTGTGGGGCGGTGTTTGCGAGGTGGTTTGTGGCGTTGGGAGATGGGGAGGATGGGAATAAGAGGAGGGAGATAGAGTTGGTGGTGGGGGAAGAAGAAGAAGAAGAAGAAGAGAGAACGGAGATGAGCAGTGGGAGCCATAGTTTGAGGAGGCAAGTTTTTGAAGGGATTGAGTTTAAAGAAGAGATAGTGAGTGACGCTTTGATGAGGGAAGAAGAGGAAGGTAGAGTTAGTATGTGTGTTCCGCCCAAGAATGCGCTTTTGCTCATGAGGTGTAGATCTGATCCGGTGAAGATGGCGGCGCTCGGGAATCGGTTTTGGGAAATGCCGGCTGCTCCGAAAGAGGAAGTGAGTGAAGATGAAGATGAGGATGAGGGTCTTGAAGAGAGAGAGAAACCACATGAAGACAAGGAAAAGGGGCAAATTGGGTTACAAACAGACGTTAAGCTTTTTGGAGACGATGGTATGTGTGAGAAATGGGTTTTGGATGGCGAAGATGTAGAAGAACAAGAAGAAAAAGAAGAGGAATTGAGTTTGGTTTTAGAGGATGAGAAACCAGAGCAAAGTGAGAGCCTGTATGAGCAACCAGAGGTAGTAGTAGAAGGAAAGGAATGCCGAGAAGAAGAGCCAGATCGAGAGGAAAATACGAATGAGCCAGCATTGGTAGAAGAAGCTGTGCTGGATTGTTCTCTAGCTGAATTTTTTGCAGATCCAGAAATGTCTGAAGTTGAAGAAATGGGGTTACAATTTGAAGAAGCACATGAAGAACAGAGAGAAGAGGAAATGAGAGAAGTAGAGCTTTCAATATCAGAAGAAGAAGTACTGTATAAACAGGAAGAAGAAGAAGCAGAGTCTTGGGCTGAAACTGAAGCAGAGGTGACAGAGGATTCAACGGCGGAGGAAGAGAAGGAGTCCAGAGAGAGTACTTGGGAAGAAGCAGAAGAGAGTCGAGCGATAGTGACCCAAGATAGACCCGAACCCGAATCCGAGCGCCCGAAGGCCCAAACGGATCTCCAACCGAAACCGTCAAGTCAAAACCAGGTCTTACCGGACTGTTTGCTGCTAATGATGTGCGAGCCGAAGCTGTCCATGGAGGTATCCAAGGAGACTTGGGTTTGCAGCACGGACTTCATCCGATGCCTCCCGGAGCGACACGTCAGCAGCAACAAAAAGGACGGTAAGGATGAGGCGAAGAAGCCGCCGCGGGTCAGCATAGCCTCGAAGCCCGCGGCGGCTCAGCAGCAGCCGATGATTCAGCCGCCGAGGTCGTCTTGTTCTTTTCCGATACAAGCGGGCGGGGGTCCGGTTTCGATGGCCGAGATTATAGGGCAGAAGCTGGTGGGGTCTAATGCCTATGAGCCGTTTGTGCTCACGCGCTGCAAGTCGGAGCCGATGAGGTCGGCGGCTAAGCTTGCGCCGGAGGCTTGCTTTTGGAAGAACAGGAAGCACGAGCCGCATCGCCACCCGGGTCCGCTCGGAGTCGGGGCGACCGGAGTCGGGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

735

Amino Acids

82.05

Weight (kDa)

4.85

Isoelectric Point (pI)

76.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15095 AT3G15095 AT3G15095
fragaria_vesca	FvH4_3g19150 FvH4_3g19150
malus_domestica	MD03G1236100.v1.1 MD11G1256900.v1.1
prunus_persica	Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1
pyrus_communis	pycom03g18230 pycom11g22700
rosa_chinensis	RchiOBHm_Chr5g0032241
rosa_laevigata	RLG00000033370
rosa_multiflora	Rmu_sc0018683.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048220
rosa_rugosa	Rorug05G0129900
rosa_samantha	Rh5AG223800 Rh5BG224500 Rh5CG249800 Rh5DG229100
rosa_wichuraiana	Rw5G020410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	316
Acc36I	ACCTGC	1 cut(s)	316
AccB1I	GGYRCC	1 cut(s)	224
AccBSI	CCGCTC	3 cut(s)	246, 642, 2176
AccII	CGCG	3 cut(s)	1906, 1931, 2077
AclWI	GGATC	3 cut(s)	980, 1406, 1719
AcoI	YGGCCR	1 cut(s)	2016
AcsI	RAATTY	1 cut(s)	1400
AcuI	CTGAAG	3 cut(s)	58, 1446, 1590
AcyI	GRCGYC	2 cut(s)	225, 408
AfaI	GTAC	3 cut(s)	145, 1524, 1627
AfiI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
AflIII	ACRYGT	2 cut(s)	314, 1855
AgsI	TTSAA	6 cut(s)	866, 1085, 1433, 1454, 1506, 1593
AjiI	CACGTC	2 cut(s)	315, 1858
AjnI	CCWGG	1 cut(s)	1740
AjuI	GAANNNNNNNTTGG	2 cut(s)	1169, 1201
Alw21I	GWGCWC	2 cut(s)	63, 2073
Alw26I	GTCTC	5 cut(s)	13, 144, 306, 1152, 1802
AlwI	GGATC	3 cut(s)	980, 1406, 1719
AlwNI	CAGNNNCTG	1 cut(s)	2038
Ama87I	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
AoxI	GGCC	3 cut(s)	139, 1701, 2016
ApoI	RAATTY	1 cut(s)	1400
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AspLEI	GCGC	6 cut(s)	227, 961, 1006, 1695, 2079, 2119
AspS9I	GGNCC	4 cut(s)	139, 1702, 2003, 2171
AsuC2I	CCSGG	6 cut(s)	137, 138, 290, 1847, 2168, 2169
AsuHPI	GGTGA	6 cut(s)	340, 346, 485, 691, 1003, 1591
AsuII	TTCGAA	1 cut(s)	282
AvaI	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
AvaII	GGWCC	2 cut(s)	2003, 2171
BanI	GGYRCC	1 cut(s)	224
BanII	GRGCYC	1 cut(s)	63
BarI	GAAGNNNNNNTAC	2 cut(s)	1506, 1538
BauI	CACGAG	3 cut(s)	52, 703, 2150
BbsI	GAAGAC	2 cut(s)	344, 1113
Bbv12I	GWGCWC	2 cut(s)	63, 2073
BccI	CCATC	7 cut(s)	33, 740, 749, 991, 1157, 1184, 2008
BceAI	ACGGC	3 cut(s)	126, 1611, 2047
BcgI	CGANNNNNNTGC	2 cut(s)	391, 425
BciT130I	CCWGG	1 cut(s)	1742
BciVI	GTATCC	1 cut(s)	1810
BcnI	CCSGG	6 cut(s)	137, 138, 290, 1847, 2168, 2169
BcoDI	GTCTC	5 cut(s)	13, 144, 306, 1152, 1802
BfaI	CTAG	1 cut(s)	1394
BfoI	RGCGCY	3 cut(s)	228, 1007, 1696
BfuAI	ACCTGC	1 cut(s)	316
BfuI	GTATCC	1 cut(s)	1810
BglII	AGATCT	1 cut(s)	980
BlpI	GCTNAGC	2 cut(s)	1938, 2109
BmcAI	AGTACT	2 cut(s)	1524, 1627
Bme1390I	CCNGG	7 cut(s)	137, 138, 290, 1742, 1847, 2168, 2169
Bme18I	GGWCC	2 cut(s)	2003, 2171
BmeT110I	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
BmgBI	CACGTC	2 cut(s)	315, 1858
BmgT120I	GGNCC	4 cut(s)	139, 1702, 2003, 2171
BmiI	GGNNCC	8 cut(s)	49, 226, 294, 418, 839, 2004, 2091, 2172
BmrFI	CCNGG	7 cut(s)	137, 138, 290, 1742, 1847, 2168, 2169
BmsI	GCATC	4 cut(s)	222, 565, 1829, 2167
BoxI	GACNNNNGTC	1 cut(s)	2195
BpiI	GAAGAC	2 cut(s)	344, 1113
Bpu1102I	GCTNAGC	2 cut(s)	1938, 2109
Bpu14I	TTCGAA	1 cut(s)	282
BpuMI	CCSGG	6 cut(s)	137, 138, 290, 1847, 2168, 2169
BsaHI	GRCGYC	2 cut(s)	225, 408
BsaI	GGTCTC	2 cut(s)	13, 144
BsaJI	CCNNGG	8 cut(s)	136, 420, 1791, 1803, 1904, 1929, 1964, 2167
BsaWI	WCCGGW	4 cut(s)	988, 1750, 2005, 2192
BsaXI	ACNNNNNCTCC	8 cut(s)	284, 314, 382, 412, 764, 794, 829, 859
Bsc4I	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
Bse118I	RCCGGY	1 cut(s)	1030
BseBI	CCWGG	1 cut(s)	1742
BseDI	CCNNGG	8 cut(s)	136, 420, 1791, 1803, 1904, 1929, 1964, 2167
BseGI	GGATG	9 cut(s)	101, 372, 667, 760, 1078, 1195, 1255, 1833, 1891
BseLI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
BseMII	CTCAG	4 cut(s)	145, 199, 211, 1952
BseRI	GAGGAG	4 cut(s)	82, 680, 781, 865
Bsh1236I	CGCG	3 cut(s)	1906, 1931, 2077
Bsh1285I	CGRYCG	2 cut(s)	383, 2193
BshFI	GGCC	3 cut(s)	141, 1703, 2018
BshNI	GGYRCC	1 cut(s)	224
BsiEI	CGRYCG	2 cut(s)	383, 2193
BsiHKAI	GWGCWC	2 cut(s)	63, 2073
BsiHKCI	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
BslFI	GGGAC	1 cut(s)	109
BslI	CCNNNNNNNGG	4 cut(s)	248, 439, 550, 2199
BsmAI	GTCTC	5 cut(s)	13, 144, 306, 1152, 1802
BsmBI	CGTCTC	2 cut(s)	306, 1152
BsmFI	GGGAC	1 cut(s)	109
BsmI	GAATGC	2 cut(s)	961, 1319
BsnI	GGCC	3 cut(s)	141, 1703, 2018
Bso31I	GGTCTC	2 cut(s)	13, 144
BsoBI	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
Bsp119I	TTCGAA	1 cut(s)	282
Bsp1286I	GDGCHC	2 cut(s)	63, 2073
Bsp143I	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
Bsp1720I	GCTNAGC	2 cut(s)	1938, 2109
Bsp19I	CCATGG	1 cut(s)	1791
BspANI	GGCC	3 cut(s)	141, 1703, 2018
BspCNI	CTCAG	4 cut(s)	144, 198, 210, 1951
BspFNI	CGCG	3 cut(s)	1906, 1931, 2077
BspHI	TCATGA	1 cut(s)	969
BspLI	GGNNCC	8 cut(s)	49, 226, 294, 418, 839, 2004, 2091, 2172
BspMI	ACCTGC	1 cut(s)	316
BspPI	GGATC	3 cut(s)	980, 1406, 1719
BspQI	GCTCTTC	2 cut(s)	68, 1320
BspT104I	TTCGAA	1 cut(s)	282
BspT107I	GGYRCC	1 cut(s)	224
BspTNI	GGTCTC	2 cut(s)	13, 144
BsrBI	CCGCTC	3 cut(s)	246, 642, 2176
BsrFI	RCCGGY	1 cut(s)	1030
BssAI	RCCGGY	1 cut(s)	1030
BssECI	CCNNGG	8 cut(s)	136, 420, 1791, 1803, 1904, 1929, 1964, 2167
BssMI	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
BssNI	GRCGYC	2 cut(s)	225, 408
BssSI	CACGAG	3 cut(s)	52, 703, 2150
BssT1I	CCWWGG	2 cut(s)	1791, 1803
Bst2BI	CACGAG	3 cut(s)	52, 703, 2150
Bst2UI	CCWGG	1 cut(s)	1742
Bst4CI	ACNGT	4 cut(s)	1527, 1728, 1757, 1880
BstACI	GRCGYC	2 cut(s)	225, 408
BstBI	TTCGAA	1 cut(s)	282
BstC8I	GCNNGC	9 cut(s)	59, 527, 1032, 1359, 1778, 1929, 1996, 2115, 2128
BstDEI	CTNAG	5 cut(s)	131, 185, 197, 1938, 2109
BstDSI	CCRYGG	3 cut(s)	1791, 1904, 1929
BstF5I	GGATG	9 cut(s)	101, 372, 667, 760, 1078, 1195, 1255, 1833, 1891
BstFNI	CGCG	3 cut(s)	1906, 1931, 2077
BstH2I	RGCGCY	3 cut(s)	228, 1007, 1696
BstHHI	GCGC	6 cut(s)	227, 961, 1006, 1695, 2079, 2119
BstKTI	GATC	7 cut(s)	383, 686, 983, 988, 1336, 1414, 1714
BstMAI	GTCTC	5 cut(s)	13, 144, 306, 1152, 1802
BstMBI	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
BstMCI	CGRYCG	2 cut(s)	383, 2193
BstNI	CCWGG	1 cut(s)	1742
BstPAI	GACNNNNGTC	1 cut(s)	2195
BstSCI	CCNGG	7 cut(s)	135, 136, 288, 1740, 1845, 2166, 2167
BstUI	CGCG	3 cut(s)	1906, 1931, 2077
BstV2I	GAAGAC	2 cut(s)	344, 1113
BstX2I	RGATCY	3 cut(s)	980, 1411, 1711
BstYI	RGATCY	3 cut(s)	980, 1411, 1711
BsuI	GTATCC	1 cut(s)	1810
BsuRI	GGCC	3 cut(s)	141, 1703, 2018
BtgI	CCRYGG	3 cut(s)	1791, 1904, 1929
BtgZI	GCGATG	2 cut(s)	11, 2144
BtrI	CACGTC	2 cut(s)	315, 1858
BtsCI	GGATG	9 cut(s)	101, 372, 667, 760, 1078, 1195, 1255, 1833, 1891
BtsI	GCAGTG	1 cut(s)	838
BtsIMutI	CAGTG	1 cut(s)	838
BveI	ACCTGC	1 cut(s)	316
Cac8I	GCNNGC	9 cut(s)	59, 527, 1032, 1359, 1778, 1929, 1996, 2115, 2128
CaiI	CAGNNNCTG	1 cut(s)	2038
CciI	TCATGA	1 cut(s)	969
CfoI	GCGC	6 cut(s)	227, 961, 1006, 1695, 2079, 2119
Cfr10I	RCCGGY	1 cut(s)	1030
Cfr13I	GGNCC	4 cut(s)	139, 1702, 2003, 2171
Cfr42I	CCGCGG	2 cut(s)	1907, 1932
Cfr9I	CCCGGG	2 cut(s)	136, 2167
CseI	GACGC	2 cut(s)	397, 908
CsiI	ACCWGGT	1 cut(s)	1740
Csp6I	GTAC	3 cut(s)	144, 1523, 1626
CviAII	CATG	6 cut(s)	106, 461, 970, 1103, 1463, 1792
CviQI	GTAC	3 cut(s)	144, 1523, 1626
DdeI	CTNAG	5 cut(s)	131, 185, 197, 1938, 2109
DinI	GGCGCC	1 cut(s)	226
DpnI	GATC	7 cut(s)	382, 685, 982, 987, 1335, 1413, 1713
DpnII	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
DraI	TTTAAA	1 cut(s)	880
EaeI	YGGCCR	1 cut(s)	2016
EciI	GGCGGA	4 cut(s)	273, 429, 936, 1613
Ecl136II	GAGCTC	1 cut(s)	61
Eco130I	CCWWGG	2 cut(s)	1791, 1803
Eco24I	GRGCYC	1 cut(s)	63
Eco31I	GGTCTC	2 cut(s)	13, 144
Eco47I	GGWCC	2 cut(s)	2003, 2171
Eco53kI	GAGCTC	1 cut(s)	61
Eco57I	CTGAAG	3 cut(s)	58, 1446, 1590
Eco88I	CYCGRG	5 cut(s)	136, 147, 241, 1007, 2167
EcoICRI	GAGCTC	1 cut(s)	61
EcoRII	CCWGG	1 cut(s)	1740
EcoT14I	CCWWGG	2 cut(s)	1791, 1803
EcoT38I	GRGCYC	1 cut(s)	63
EgeI	GGCGCC	1 cut(s)	226
EheI	GGCGCC	1 cut(s)	226
ErhI	CCWWGG	2 cut(s)	1791, 1803
Esp3I	CGTCTC	2 cut(s)	306, 1152
FaeI	CATG	6 cut(s)	109, 464, 973, 1106, 1466, 1795
FalI	AAGNNNNNCTT	2 cut(s)	1485, 1517
FaqI	GGGAC	1 cut(s)	109
FatI	CATG	6 cut(s)	105, 460, 969, 1102, 1462, 1791
FauI	CCCGC	5 cut(s)	269, 1899, 1936, 1987, 1991
FokI	GGATG	9 cut(s)	88, 379, 674, 767, 1085, 1202, 1262, 1820, 1898
FriOI	GRGCYC	1 cut(s)	63
FspBI	CTAG	1 cut(s)	1394
GlaI	GCGC	6 cut(s)	226, 960, 1005, 1694, 2078, 2118
HaeII	RGCGCY	3 cut(s)	228, 1007, 1696
HaeIII	GGCC	3 cut(s)	141, 1703, 2018
HgaI	GACGC	2 cut(s)	397, 908
HhaI	GCGC	6 cut(s)	227, 961, 1006, 1695, 2079, 2119
Hin1I	GRCGYC	2 cut(s)	225, 408
Hin1II	CATG	6 cut(s)	109, 464, 973, 1106, 1466, 1795
Hin6I	GCGC	6 cut(s)	225, 959, 1004, 1693, 2077, 2117
HinP1I	GCGC	6 cut(s)	225, 959, 1004, 1693, 2077, 2117
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	2 cut(s)	1148, 2111
HpaI	GTTAAC	1 cut(s)	454
HphI	GGTGA	6 cut(s)	340, 346, 485, 691, 1003, 1591
Hpy166II	GTNNAC	1 cut(s)	454
Hpy188III	TCNNGA	8 cut(s)	149, 241, 970, 1009, 1082, 1337, 1415, 1617
Hpy8I	GTNNAC	1 cut(s)	454
Hpy99I	CGWCG	2 cut(s)	413, 634
HpyAV	CCTTC	7 cut(s)	306, 652, 860, 917, 1298, 1603, 1693
HpyCH4III	ACNGT	4 cut(s)	1527, 1728, 1757, 1880
HpyCH4IV	ACGT	3 cut(s)	314, 1143, 1857
HpyCH4V	TGCA	4 cut(s)	556, 1409, 1821, 2082
HpyF3I	CTNAG	5 cut(s)	131, 185, 197, 1938, 2109
HpySE526I	ACGT	3 cut(s)	314, 1143, 1857
Hsp92I	GRCGYC	2 cut(s)	225, 408
Hsp92II	CATG	6 cut(s)	109, 464, 973, 1106, 1466, 1795
HspAI	GCGC	6 cut(s)	225, 959, 1004, 1693, 2077, 2117
KasI	GGCGCC	1 cut(s)	224
KroI	GCCGGC	1 cut(s)	1030
KroNI	GCCGGC	1 cut(s)	1032
KspAI	GTTAAC	1 cut(s)	454
KspI	CCGCGG	2 cut(s)	1907, 1932
Kzo9I	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
LguI	GCTCTTC	2 cut(s)	68, 1320
LmnI	GCTCC	8 cut(s)	292, 390, 416, 442, 837, 1042, 1849, 2089
LweI	GCATC	4 cut(s)	222, 565, 1829, 2167
MabI	ACCWGGT	1 cut(s)	1740
MaeI	CTAG	1 cut(s)	1394
MaeII	ACGT	3 cut(s)	314, 1143, 1857
MaeIII	GTNAC	6 cut(s)	310, 896, 1131, 1443, 1579, 1660
MalI	GATC	7 cut(s)	382, 685, 982, 987, 1335, 1413, 1713
MbiI	CCGCTC	3 cut(s)	246, 642, 2176
MboI	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
MflI	RGATCY	3 cut(s)	980, 1411, 1711
MhlI	GDGCHC	2 cut(s)	63, 2073
MluCI	AATT	4 cut(s)	1125, 1229, 1400, 1448
Mly113I	GGCGCC	1 cut(s)	225
MlyI	GAGTC	7 cut(s)	20, 484, 1562, 1622, 1657, 2190, 2205
MmeI	TCCRAC	4 cut(s)	512, 579, 1741, 2067
MroNI	GCCGGC	1 cut(s)	1030
MseI	TTAA	6 cut(s)	453, 566, 606, 879, 1146, 2206
MspA1I	CMGCKG	4 cut(s)	45, 405, 1906, 1931
MspR9I	CCNGG	7 cut(s)	137, 138, 290, 1742, 1847, 2168, 2169
Mva1269I	GAATGC	2 cut(s)	961, 1319
MvaI	CCWGG	1 cut(s)	1742
MvnI	CGCG	3 cut(s)	1906, 1931, 2077
NaeI	GCCGGC	1 cut(s)	1032
NarI	GGCGCC	1 cut(s)	225
NciI	CCSGG	6 cut(s)	137, 138, 290, 1847, 2168, 2169
NcoI	CCATGG	1 cut(s)	1791
NdeII	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
NgoMIV	GCCGGC	1 cut(s)	1030
NlaIII	CATG	6 cut(s)	109, 464, 973, 1106, 1466, 1795
NlaIV	GGNNCC	8 cut(s)	49, 226, 294, 418, 839, 2004, 2091, 2172
NmeAIII	GCCGAG	4 cut(s)	445, 1343, 1989, 2044
NmuCI	GTSAC	4 cut(s)	310, 896, 1579, 1660
NspV	TTCGAA	1 cut(s)	282
PaeR7I	CTCGAG	1 cut(s)	147
PagI	TCATGA	1 cut(s)	969
PaqCI	CACCTGC	1 cut(s)	316
PciSI	GCTCTTC	2 cut(s)	68, 1320
PcsI	WCGNNNNNNNCGW	1 cut(s)	417
PctI	GAATGC	2 cut(s)	961, 1319
PdiI	GCCGGC	1 cut(s)	1032
PfeI	GAWTC	5 cut(s)	616, 1012, 1589, 1685, 1954
PfoI	TCCNGGA	1 cut(s)	1845
Ple19I	CGATCG	1 cut(s)	383
PleI	GAGTC	7 cut(s)	19, 484, 1561, 1621, 1656, 2189, 2204
PluTI	GGCGCC	1 cut(s)	228
PpsI	GAGTC	7 cut(s)	19, 484, 1561, 1621, 1656, 2189, 2204
PshAI	GACNNNNGTC	1 cut(s)	2195
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	1 cut(s)	1740
PspGI	CCWGG	1 cut(s)	1740
PspN4I	GGNNCC	8 cut(s)	49, 226, 294, 418, 839, 2004, 2091, 2172
PspPI	GGNCC	4 cut(s)	139, 1702, 2003, 2171
PstNI	CAGNNNCTG	1 cut(s)	2038
PsuI	RGATCY	3 cut(s)	980, 1411, 1711
PvuI	CGATCG	1 cut(s)	383
RsaI	GTAC	3 cut(s)	145, 1524, 1627
RsaNI	GTAC	3 cut(s)	144, 1523, 1626
SacI	GAGCTC	1 cut(s)	63
SacII	CCGCGG	2 cut(s)	1907, 1932
SapI	GCTCTTC	2 cut(s)	68, 1320
SaqAI	TTAA	6 cut(s)	453, 566, 606, 879, 1146, 2206
Sau3AI	GATC	7 cut(s)	380, 683, 980, 985, 1333, 1411, 1711
Sau96I	GGNCC	4 cut(s)	139, 1702, 2003, 2171
ScaI	AGTACT	2 cut(s)	1524, 1627
SchI	GAGTC	7 cut(s)	20, 484, 1562, 1622, 1657, 2190, 2205
ScrFI	CCNGG	7 cut(s)	137, 138, 290, 1742, 1847, 2168, 2169
SduI	GDGCHC	2 cut(s)	63, 2073
SexAI	ACCWGGT	1 cut(s)	1740
SfaNI	GCATC	4 cut(s)	222, 565, 1829, 2167
SfoI	GGCGCC	1 cut(s)	226
Sfr274I	CTCGAG	1 cut(s)	147
Sfr303I	CCGCGG	2 cut(s)	1907, 1932
SfuI	TTCGAA	1 cut(s)	282
SgrBI	CCGCGG	2 cut(s)	1907, 1932
SinI	GGWCC	2 cut(s)	2003, 2171
SlaI	CTCGAG	1 cut(s)	147
SmaI	CCCGGG	2 cut(s)	138, 2169
SmlI	CTYRAG	1 cut(s)	147
SmoI	CTYRAG	1 cut(s)	147
SrfI	GCCCGGGC	1 cut(s)	138
Sse9I	AATT	4 cut(s)	1125, 1229, 1400, 1448
SspDI	GGCGCC	1 cut(s)	224
SspMI	CTAG	1 cut(s)	1394
SstI	GAGCTC	1 cut(s)	63
StyD4I	CCNGG	7 cut(s)	135, 136, 288, 1740, 1845, 2166, 2167
StyI	CCWWGG	2 cut(s)	1791, 1803
TaaI	ACNGT	4 cut(s)	1527, 1728, 1757, 1880
TaiI	ACGT	3 cut(s)	317, 1146, 1860
TaqI	TCGA	7 cut(s)	148, 282, 383, 1336, 1651, 1922, 2012
TasI	AATT	4 cut(s)	1125, 1229, 1400, 1448
TatI	WGTACW	2 cut(s)	1522, 1625
TfiI	GAWTC	5 cut(s)	616, 1012, 1589, 1685, 1954
Tru1I	TTAA	6 cut(s)	453, 566, 606, 879, 1146, 2206
Tru9I	TTAA	6 cut(s)	453, 566, 606, 879, 1146, 2206
TscAI	CASTG	1 cut(s)	838
TseFI	GTSAC	4 cut(s)	310, 896, 1579, 1660
Tsp45I	GTSAC	4 cut(s)	310, 896, 1579, 1660
TspDTI	ATGAA	9 cut(s)	55, 90, 122, 470, 477, 1077, 1119, 1479, 1822
TspGWI	ACGGA	3 cut(s)	836, 1724, 1841
TspMI	CCCGGG	2 cut(s)	136, 2167
TspRI	CASTG	1 cut(s)	838
VpaK11BI	GGWCC	2 cut(s)	2003, 2171
XapI	RAATTY	1 cut(s)	1400
XhoI	CTCGAG	1 cut(s)	147
XmaI	CCCGGG	2 cut(s)	136, 2167
XspI	CTAG	1 cut(s)	1394
ZrmI	AGTACT	2 cut(s)	1524, 1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.