Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0009342

Physical Location & Seq

Genomic Coordinates Forward (+)

26018435 .. 26020645

Gene Structure 2211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG229100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGTGGAGTCAGAGAGACCCCATCGCAGCAAGAGTAGCAGCGGAACCACGAGCGAGCTCTTCATTTGCTTCAGCACTTCTCGCCTCTCCTCTTCTTCATCCATGAAGCTCTCTTCCAAGTCCCTACTCAGCCCGGGCCGTACTCGAGACCAGACCCCCCAAATCTCGCTCTCTTCCTCTCTCAGCCGCCGCCTCAGAACCAGCAGCAGCATTAAAGGCGGCGCCTCTCCGATGTTCCCGAGCGGCGGCGGCGGCGGAAGTAAGAAGCGAGGCGGGTTCGAAAACCCGGAGCCTTCGTCTCCCAAAGTGACGTGTATTGGGCAGGTGAGGGTGAAGACGAAGAAGCAGGGGAAGAAGATGAGGATGATAAGCAGCCGATCGAAGCGGAGCAGGAGCGGCAGCGGCGTCGGCGGAGCCGAGGCGAGTTTCCGAAAAGCGGAGCAGAGTGTTAACCAACATGAAAGTTTCCAAGCACTTCATTTTCCGACTCACCAGATGAGTAGCAGCAGCCAGAGGGAGTGCTTGCGGCAGAGGAATAACCAGAGGTGGGTGCATCTTCCTTTAACCATTTGCGAGGCGTTGAGGGCTTTCGGGTCGGAGTTTAACTGCCTGATTCCGAATAAGTCGTCGTGTTTGAGCGGCGGCGAGGCGAAGAAGGATGAGGATAACAAAGGGGTGAGATCGGAGAGTGGGAATAGCTCGTGTGGGGCGGTGTTTGCGAGGTGGTTTGTGGCGTTGGGAGATGGGGAGGATGGGAATAAGAGGAGGGAGATAGAGTTGGTGGTGGGGGAAGAAGAAGAAGAAGAGAGAACGGAGATGAGCAGTGGGAGCCATAGTTTGAGGAGGCAAGTTTTTGAAGGGATTGAGTTTAAAGAAGAGATAGTGAGTGAGGCTTTGATGAGGGAAGAAGAGGAAGGTAGAGTTAGTGTGTGTGTTCCGCCCAAGAATGCGCTTTTGCTCATGAGGTGTAGATCTGATCCGGTGAAGATGGCGGCGCTCGGGAATCGGTTTTGGGAAATGCCGGCCGCTCCGAAAGAGGAAGTGAGTGAAGATGAAGATGAGGATGAGGGTCTTGAAGAGAAAGAGAAACCACATGAAGAAAAGGAAAAGGGGCAAATTGGGTTACAAACAGACGTTAAGCTTTTTGGAGACGATGGTATGTGTGAGAAATGGGTTTTGGATGGCGAAGATGTAGAAGAACAAGAAGAAAAAGAAGAGGAATTGAGTTTGGTTTTAGAGGATGAGAAACCAGAGCAAAGTGAGAGCCTGTATGAGCAACCAGAGGTAGTAGTAGAAGGAAAGGAATGCCGAGAAGAAGAGCCAGATCGAGAGGAAAATACGAATGAGCCAGCATTGGTAGAAGAAGCTGTGCTGGATTCTTCTCTAGCTGAATTTTTTGCAGATCCAGAAATGTCTGAAGTTGAAGAAATGGGGTTACAATTTGAAGAAGCACATGAAGAACAGAGAGAAGAGGAAATGAGAGAAGTAGAGCTTTCAATATCAGAAGAAGAAGTACTGTATAAGCAGGAAGAAGAAGAAGAAGCAGAGTCTTGGGATGAAACTGAAGCAGAGGTGACAGAGGACTCAACGGCGGAGGAAGAGAAGGAGTCCAGAGAGAGTACTTGGGAAGAAGCAGAAGAGAGTCGAGCGATAGTGACCCAAGATAGACCCGAACCCGAATCCGAGCGCCCGAAGGCCCAAACGGGTCTCCAACCGAAACCGTCAAATCAAAACCAGGTCTTACCGGACTGTTTGCTGCTAATGATGTGCGAGCCGAAGCTGTCCATGGAGGTATCCAAGGAAACTTGGGTTTGCAGCACGGACTTCATCCGATGCCTCCCGGAGCGACACGTCAGCAGCAACAAAAAGGACGGCAAGGATGAGGCGAAGAAGCCGCCGCGGGTCAGCATAGATTCGAAAGCCTCGAAGCCCGCGGCGGCTCAGCAGCAGCCGATGATTCAGCCGCCGAGGTCGTCTTGTTCTTTTCCGATACAAGCGGGCGGGGGTCCGGTTTCGATGGCCGAGATCATAGGGCAGAAGCTGGTTGGGTCTACTGCCTATGAGCCGTTTGTGCTCACGCGCTGCAAGTCGGAGCCGATGAGGTCGGCGGCTAAGCTTGCGCCGGAGGCTTGCTTTTGGAAGAACAGGAAGCACGAGCCGCATCGCCACCCGGGTCCGCTCGGAGTCGGGGCGACCGGAGTCGGGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

736

Amino Acids

82.06

Weight (kDa)

4.86

Isoelectric Point (pI)

76.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15095 AT3G15095 AT3G15095
fragaria_vesca	FvH4_3g19150 FvH4_3g19150
malus_domestica	MD03G1236100.v1.1 MD11G1256900.v1.1
prunus_persica	Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1 Prupe.4G173200_v2.0.a1
pyrus_communis	pycom03g18230 pycom11g22700
rosa_chinensis	RchiOBHm_Chr5g0032241
rosa_laevigata	RLG00000033370
rosa_multiflora	Rmu_sc0018683.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048220
rosa_rugosa	Rorug05G0129900
rosa_samantha	Rh5AG223800 Rh5BG224500 Rh5CG249800 Rh5DG229100
rosa_wichuraiana	Rw5G020410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	313
Acc36I	ACCTGC	1 cut(s)	313
AccB1I	GGYRCC	1 cut(s)	221
AccBSI	CCGCTC	5 cut(s)	243, 396, 639, 1028, 2179
AccI	GTMKAC	1 cut(s)	2051
AccII	CGCG	3 cut(s)	1900, 1934, 2080
AclWI	GGATC	2 cut(s)	971, 1397
AcoI	YGGCCR	2 cut(s)	1023, 2019
AcsI	RAATTY	1 cut(s)	1391
AcuI	CTGAAG	3 cut(s)	55, 1437, 1584
AcyI	GRCGYC	2 cut(s)	222, 405
AfaI	GTAC	3 cut(s)	142, 1515, 1621
AfiI	CCNNNNNNNGG	4 cut(s)	245, 436, 547, 2202
AflIII	ACRYGT	2 cut(s)	311, 1849
AgsI	TTSAA	5 cut(s)	857, 1076, 1424, 1445, 1497
AjiI	CACGTC	2 cut(s)	312, 1852
AjnI	CCWGG	1 cut(s)	1734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1160, 1192
Alw21I	GWGCWC	2 cut(s)	60, 2076
Alw26I	GTCTC	5 cut(s)	10, 141, 303, 1143, 1712
AlwI	GGATC	2 cut(s)	971, 1397
AlwNI	CAGNNNCTG	1 cut(s)	2041
Ama87I	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
AoxI	GGCC	4 cut(s)	136, 1023, 1695, 2019
ApoI	RAATTY	1 cut(s)	1391
ArsI	GACNNNNNNTTYG	2 cut(s)	611, 643
AspLEI	GCGC	6 cut(s)	224, 952, 997, 1689, 2082, 2122
AspS9I	GGNCC	4 cut(s)	136, 1696, 2006, 2174
AsuC2I	CCSGG	6 cut(s)	134, 135, 287, 1841, 2171, 2172
AsuHPI	GGTGA	6 cut(s)	337, 343, 482, 688, 994, 1585
AsuII	TTCGAA	2 cut(s)	279, 1916
AvaI	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
AvaII	GGWCC	2 cut(s)	2006, 2174
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	1 cut(s)	60
BarI	GAAGNNNNNNTAC	2 cut(s)	1497, 1529
BauI	CACGAG	3 cut(s)	49, 700, 2153
BbsI	GAAGAC	1 cut(s)	341
Bbv12I	GWGCWC	2 cut(s)	60, 2076
BccI	CCATC	7 cut(s)	30, 737, 746, 982, 1148, 1175, 2011
BceAI	ACGGC	4 cut(s)	123, 1605, 1888, 2050
BcgI	CGANNNNNNTGC	2 cut(s)	388, 422
BciT130I	CCWGG	1 cut(s)	1736
BciVI	GTATCC	1 cut(s)	1804
BcnI	CCSGG	6 cut(s)	134, 135, 287, 1841, 2171, 2172
BcoDI	GTCTC	5 cut(s)	10, 141, 303, 1143, 1712
BfaI	CTAG	1 cut(s)	1385
BfoI	RGCGCY	3 cut(s)	225, 998, 1690
BfuAI	ACCTGC	1 cut(s)	313
BfuI	GTATCC	1 cut(s)	1804
BglII	AGATCT	1 cut(s)	971
BlpI	GCTNAGC	2 cut(s)	1941, 2112
BmcAI	AGTACT	2 cut(s)	1515, 1621
Bme1390I	CCNGG	7 cut(s)	134, 135, 287, 1736, 1841, 2171, 2172
Bme18I	GGWCC	2 cut(s)	2006, 2174
BmeT110I	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
BmgBI	CACGTC	2 cut(s)	312, 1852
BmgT120I	GGNCC	4 cut(s)	136, 1696, 2006, 2174
BmiI	GGNNCC	8 cut(s)	46, 223, 291, 415, 830, 2007, 2094, 2175
BmrFI	CCNGG	7 cut(s)	134, 135, 287, 1736, 1841, 2171, 2172
BmsI	GCATC	3 cut(s)	562, 1823, 2170
BoxI	GACNNNNGTC	1 cut(s)	2198
BpiI	GAAGAC	1 cut(s)	341
Bpu1102I	GCTNAGC	2 cut(s)	1941, 2112
Bpu14I	TTCGAA	2 cut(s)	279, 1916
BpuMI	CCSGG	6 cut(s)	134, 135, 287, 1841, 2171, 2172
BsaHI	GRCGYC	2 cut(s)	222, 405
BsaI	GGTCTC	3 cut(s)	10, 141, 1712
BsaJI	CCNNGG	8 cut(s)	133, 417, 1785, 1797, 1898, 1932, 1967, 2170
BsaWI	WCCGGW	4 cut(s)	979, 1744, 2008, 2195
BsaXI	ACNNNNNCTCC	6 cut(s)	281, 311, 761, 791, 820, 850
Bsc4I	CCNNNNNNNGG	4 cut(s)	245, 436, 547, 2202
Bse118I	RCCGGY	1 cut(s)	1021
BseBI	CCWGG	1 cut(s)	1736
BseDI	CCNNGG	8 cut(s)	133, 417, 1785, 1797, 1898, 1932, 1967, 2170
BseLI	CCNNNNNNNGG	4 cut(s)	245, 436, 547, 2202
BseMII	CTCAG	4 cut(s)	142, 196, 208, 1955
BseRI	GAGGAG	3 cut(s)	79, 778, 856
BseX3I	CGGCCG	1 cut(s)	1023
Bsh1236I	CGCG	3 cut(s)	1900, 1934, 2080
Bsh1285I	CGRYCG	3 cut(s)	380, 1026, 2196
BshFI	GGCC	4 cut(s)	138, 1025, 1697, 2021
BshNI	GGYRCC	1 cut(s)	221
BsiEI	CGRYCG	3 cut(s)	380, 1026, 2196
BsiHKAI	GWGCWC	2 cut(s)	60, 2076
BsiHKCI	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
BslFI	GGGAC	1 cut(s)	106
BslI	CCNNNNNNNGG	4 cut(s)	245, 436, 547, 2202
BsmAI	GTCTC	5 cut(s)	10, 141, 303, 1143, 1712
BsmBI	CGTCTC	2 cut(s)	303, 1143
BsmFI	GGGAC	1 cut(s)	106
BsmI	GAATGC	2 cut(s)	952, 1310
BsnI	GGCC	4 cut(s)	138, 1025, 1697, 2021
Bso31I	GGTCTC	3 cut(s)	10, 141, 1712
BsoBI	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
Bsp119I	TTCGAA	2 cut(s)	279, 1916
Bsp1286I	GDGCHC	2 cut(s)	60, 2076
Bsp143I	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
Bsp1720I	GCTNAGC	2 cut(s)	1941, 2112
Bsp19I	CCATGG	1 cut(s)	1785
BspANI	GGCC	4 cut(s)	138, 1025, 1697, 2021
BspCNI	CTCAG	4 cut(s)	141, 195, 207, 1954
BspFNI	CGCG	3 cut(s)	1900, 1934, 2080
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	8 cut(s)	46, 223, 291, 415, 830, 2007, 2094, 2175
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	2 cut(s)	971, 1397
BspQI	GCTCTTC	2 cut(s)	65, 1311
BspT104I	TTCGAA	2 cut(s)	279, 1916
BspT107I	GGYRCC	1 cut(s)	221
BspTNI	GGTCTC	3 cut(s)	10, 141, 1712
BsrBI	CCGCTC	5 cut(s)	243, 396, 639, 1028, 2179
BsrFI	RCCGGY	1 cut(s)	1021
BssAI	RCCGGY	1 cut(s)	1021
BssECI	CCNNGG	8 cut(s)	133, 417, 1785, 1797, 1898, 1932, 1967, 2170
BssMI	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
BssNI	GRCGYC	2 cut(s)	222, 405
BssSI	CACGAG	3 cut(s)	49, 700, 2153
BssT1I	CCWWGG	2 cut(s)	1785, 1797
Bst2BI	CACGAG	3 cut(s)	49, 700, 2153
Bst2UI	CCWGG	1 cut(s)	1736
Bst4CI	ACNGT	3 cut(s)	1518, 1722, 1751
BstACI	GRCGYC	2 cut(s)	222, 405
BstBI	TTCGAA	2 cut(s)	279, 1916
BstC8I	GCNNGC	9 cut(s)	56, 524, 1023, 1350, 1772, 1932, 1999, 2118, 2131
BstDEI	CTNAG	5 cut(s)	128, 182, 194, 1941, 2112
BstDSI	CCRYGG	3 cut(s)	1785, 1898, 1932
BstFNI	CGCG	3 cut(s)	1900, 1934, 2080
BstH2I	RGCGCY	3 cut(s)	225, 998, 1690
BstHHI	GCGC	6 cut(s)	224, 952, 997, 1689, 2082, 2122
BstKTI	GATC	7 cut(s)	380, 683, 974, 979, 1327, 1405, 2028
BstMAI	GTCTC	5 cut(s)	10, 141, 303, 1143, 1712
BstMBI	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
BstMCI	CGRYCG	3 cut(s)	380, 1026, 2196
BstNI	CCWGG	1 cut(s)	1736
BstPAI	GACNNNNGTC	1 cut(s)	2198
BstSCI	CCNGG	7 cut(s)	132, 133, 285, 1734, 1839, 2169, 2170
BstUI	CGCG	3 cut(s)	1900, 1934, 2080
BstV2I	GAAGAC	1 cut(s)	341
BstX2I	RGATCY	2 cut(s)	971, 1402
BstYI	RGATCY	2 cut(s)	971, 1402
BstZI	CGGCCG	1 cut(s)	1023
BsuI	GTATCC	1 cut(s)	1804
BsuRI	GGCC	4 cut(s)	138, 1025, 1697, 2021
BtgI	CCRYGG	3 cut(s)	1785, 1898, 1932
BtgZI	GCGATG	2 cut(s)	8, 2147
BtrI	CACGTC	2 cut(s)	312, 1852
BtsI	GCAGTG	1 cut(s)	829
BtsIMutI	CAGTG	1 cut(s)	829
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	9 cut(s)	56, 524, 1023, 1350, 1772, 1932, 1999, 2118, 2131
CaiI	CAGNNNCTG	1 cut(s)	2041
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	6 cut(s)	224, 952, 997, 1689, 2082, 2122
Cfr10I	RCCGGY	1 cut(s)	1021
Cfr13I	GGNCC	4 cut(s)	136, 1696, 2006, 2174
Cfr42I	CCGCGG	2 cut(s)	1901, 1935
Cfr9I	CCCGGG	2 cut(s)	133, 2170
CseI	GACGC	1 cut(s)	394
CsiI	ACCWGGT	1 cut(s)	1734
Csp6I	GTAC	3 cut(s)	141, 1514, 1620
CviAII	CATG	6 cut(s)	103, 458, 961, 1094, 1454, 1786
CviQI	GTAC	3 cut(s)	141, 1514, 1620
DdeI	CTNAG	5 cut(s)	128, 182, 194, 1941, 2112
DinI	GGCGCC	1 cut(s)	223
DpnI	GATC	7 cut(s)	379, 682, 973, 978, 1326, 1404, 2027
DpnII	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
DraI	TTTAAA	1 cut(s)	871
EaeI	YGGCCR	2 cut(s)	1023, 2019
EagI	CGGCCG	1 cut(s)	1023
EciI	GGCGGA	4 cut(s)	270, 426, 927, 1607
Ecl136II	GAGCTC	1 cut(s)	58
EclXI	CGGCCG	1 cut(s)	1023
Eco130I	CCWWGG	2 cut(s)	1785, 1797
Eco24I	GRGCYC	1 cut(s)	60
Eco31I	GGTCTC	3 cut(s)	10, 141, 1712
Eco47I	GGWCC	2 cut(s)	2006, 2174
Eco52I	CGGCCG	1 cut(s)	1023
Eco53kI	GAGCTC	1 cut(s)	58
Eco57I	CTGAAG	3 cut(s)	55, 1437, 1584
Eco88I	CYCGRG	5 cut(s)	133, 144, 238, 998, 2170
EcoICRI	GAGCTC	1 cut(s)	58
EcoRII	CCWGG	1 cut(s)	1734
EcoT14I	CCWWGG	2 cut(s)	1785, 1797
EcoT38I	GRGCYC	1 cut(s)	60
EgeI	GGCGCC	1 cut(s)	223
EheI	GGCGCC	1 cut(s)	223
ErhI	CCWWGG	2 cut(s)	1785, 1797
Esp3I	CGTCTC	2 cut(s)	303, 1143
FaeI	CATG	6 cut(s)	106, 461, 964, 1097, 1457, 1789
FalI	AAGNNNNNCTT	2 cut(s)	1476, 1508
FaqI	GGGAC	1 cut(s)	106
FatI	CATG	6 cut(s)	102, 457, 960, 1093, 1453, 1785
FauI	CCCGC	5 cut(s)	266, 1893, 1939, 1990, 1994
FblI	GTMKAC	1 cut(s)	2051
FriOI	GRGCYC	1 cut(s)	60
FspBI	CTAG	1 cut(s)	1385
GlaI	GCGC	6 cut(s)	223, 951, 996, 1688, 2081, 2121
HaeII	RGCGCY	3 cut(s)	225, 998, 1690
HaeIII	GGCC	4 cut(s)	138, 1025, 1697, 2021
HgaI	GACGC	1 cut(s)	394
HhaI	GCGC	6 cut(s)	224, 952, 997, 1689, 2082, 2122
Hin1I	GRCGYC	2 cut(s)	222, 405
Hin1II	CATG	6 cut(s)	106, 461, 964, 1097, 1457, 1789
Hin6I	GCGC	6 cut(s)	222, 950, 995, 1687, 2080, 2120
HinP1I	GCGC	6 cut(s)	222, 950, 995, 1687, 2080, 2120
HincII	GTYRAC	1 cut(s)	451
HindII	GTYRAC	1 cut(s)	451
HindIII	AAGCTT	2 cut(s)	1139, 2114
HpaI	GTTAAC	1 cut(s)	451
HphI	GGTGA	6 cut(s)	337, 343, 482, 688, 994, 1585
Hpy166II	GTNNAC	2 cut(s)	451, 2052
Hpy188III	TCNNGA	8 cut(s)	146, 238, 961, 1000, 1073, 1328, 1406, 1611
Hpy8I	GTNNAC	2 cut(s)	451, 2052
Hpy99I	CGWCG	2 cut(s)	410, 631
HpyAV	CCTTC	7 cut(s)	303, 649, 851, 908, 1289, 1597, 1687
HpyCH4III	ACNGT	3 cut(s)	1518, 1722, 1751
HpyCH4IV	ACGT	3 cut(s)	311, 1134, 1851
HpyCH4V	TGCA	4 cut(s)	553, 1400, 1815, 2085
HpyF3I	CTNAG	5 cut(s)	128, 182, 194, 1941, 2112
HpySE526I	ACGT	3 cut(s)	311, 1134, 1851
Hsp92I	GRCGYC	2 cut(s)	222, 405
Hsp92II	CATG	6 cut(s)	106, 461, 964, 1097, 1457, 1789
HspAI	GCGC	6 cut(s)	222, 950, 995, 1687, 2080, 2120
KasI	GGCGCC	1 cut(s)	221
KroI	GCCGGC	1 cut(s)	1021
KroNI	GCCGGC	1 cut(s)	1023
KspAI	GTTAAC	1 cut(s)	451
KspI	CCGCGG	2 cut(s)	1901, 1935
Kzo9I	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
LguI	GCTCTTC	2 cut(s)	65, 1311
LmnI	GCTCC	9 cut(s)	289, 387, 393, 413, 439, 828, 1033, 1843, 2092
LweI	GCATC	3 cut(s)	562, 1823, 2170
MabI	ACCWGGT	1 cut(s)	1734
MaeI	CTAG	1 cut(s)	1385
MaeII	ACGT	3 cut(s)	311, 1134, 1851
MaeIII	GTNAC	5 cut(s)	307, 1122, 1434, 1573, 1654
MalI	GATC	7 cut(s)	379, 682, 973, 978, 1326, 1404, 2027
MbiI	CCGCTC	5 cut(s)	243, 396, 639, 1028, 2179
MboI	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
MflI	RGATCY	2 cut(s)	971, 1402
MhlI	GDGCHC	2 cut(s)	60, 2076
MluCI	AATT	4 cut(s)	1116, 1220, 1391, 1439
Mly113I	GGCGCC	1 cut(s)	222
MlyI	GAGTC	8 cut(s)	17, 481, 1556, 1577, 1616, 1651, 2193, 2208
MmeI	TCCRAC	4 cut(s)	509, 576, 1735, 2070
MroNI	GCCGGC	1 cut(s)	1021
MseI	TTAA	7 cut(s)	213, 450, 563, 603, 870, 1137, 2209
MspA1I	CMGCKG	4 cut(s)	42, 402, 1900, 1934
MspR9I	CCNGG	7 cut(s)	134, 135, 287, 1736, 1841, 2171, 2172
Mva1269I	GAATGC	2 cut(s)	952, 1310
MvaI	CCWGG	1 cut(s)	1736
MvnI	CGCG	3 cut(s)	1900, 1934, 2080
NaeI	GCCGGC	1 cut(s)	1023
NarI	GGCGCC	1 cut(s)	222
NciI	CCSGG	6 cut(s)	134, 135, 287, 1841, 2171, 2172
NcoI	CCATGG	1 cut(s)	1785
NdeII	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
NgoMIV	GCCGGC	1 cut(s)	1021
NlaIII	CATG	6 cut(s)	106, 461, 964, 1097, 1457, 1789
NlaIV	GGNNCC	8 cut(s)	46, 223, 291, 415, 830, 2007, 2094, 2175
NmeAIII	GCCGAG	4 cut(s)	442, 1334, 1992, 2047
NmuCI	GTSAC	3 cut(s)	307, 1573, 1654
NspV	TTCGAA	2 cut(s)	279, 1916
PaeR7I	CTCGAG	1 cut(s)	144
PagI	TCATGA	1 cut(s)	960
PaqCI	CACCTGC	1 cut(s)	313
PciSI	GCTCTTC	2 cut(s)	65, 1311
PcsI	WCGNNNNNNNCGW	2 cut(s)	414, 1922
PctI	GAATGC	2 cut(s)	952, 1310
PdiI	GCCGGC	1 cut(s)	1023
PfeI	GAWTC	6 cut(s)	613, 1003, 1376, 1679, 1913, 1957
PfoI	TCCNGGA	1 cut(s)	1839
Ple19I	CGATCG	1 cut(s)	380
PleI	GAGTC	8 cut(s)	16, 481, 1555, 1577, 1615, 1650, 2192, 2207
PluTI	GGCGCC	1 cut(s)	225
PpsI	GAGTC	8 cut(s)	16, 481, 1555, 1577, 1615, 1650, 2192, 2207
PshAI	GACNNNNGTC	1 cut(s)	2198
Psp124BI	GAGCTC	1 cut(s)	60
Psp6I	CCWGG	1 cut(s)	1734
PspGI	CCWGG	1 cut(s)	1734
PspN4I	GGNNCC	8 cut(s)	46, 223, 291, 415, 830, 2007, 2094, 2175
PspPI	GGNCC	4 cut(s)	136, 1696, 2006, 2174
PstNI	CAGNNNCTG	1 cut(s)	2041
PsuI	RGATCY	2 cut(s)	971, 1402
PvuI	CGATCG	1 cut(s)	380
RsaI	GTAC	3 cut(s)	142, 1515, 1621
RsaNI	GTAC	3 cut(s)	141, 1514, 1620
SacI	GAGCTC	1 cut(s)	60
SacII	CCGCGG	2 cut(s)	1901, 1935
SapI	GCTCTTC	2 cut(s)	65, 1311
SaqAI	TTAA	7 cut(s)	213, 450, 563, 603, 870, 1137, 2209
Sau3AI	GATC	7 cut(s)	377, 680, 971, 976, 1324, 1402, 2025
Sau96I	GGNCC	4 cut(s)	136, 1696, 2006, 2174
ScaI	AGTACT	2 cut(s)	1515, 1621
SchI	GAGTC	8 cut(s)	17, 481, 1556, 1577, 1616, 1651, 2193, 2208
ScrFI	CCNGG	7 cut(s)	134, 135, 287, 1736, 1841, 2171, 2172
SduI	GDGCHC	2 cut(s)	60, 2076
SexAI	ACCWGGT	1 cut(s)	1734
SfaNI	GCATC	3 cut(s)	562, 1823, 2170
SfoI	GGCGCC	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	144
Sfr303I	CCGCGG	2 cut(s)	1901, 1935
SfuI	TTCGAA	2 cut(s)	279, 1916
SgrBI	CCGCGG	2 cut(s)	1901, 1935
SinI	GGWCC	2 cut(s)	2006, 2174
SlaI	CTCGAG	1 cut(s)	144
SmaI	CCCGGG	2 cut(s)	135, 2172
SmlI	CTYRAG	1 cut(s)	144
SmoI	CTYRAG	1 cut(s)	144
SrfI	GCCCGGGC	1 cut(s)	135
Sse9I	AATT	4 cut(s)	1116, 1220, 1391, 1439
SspDI	GGCGCC	1 cut(s)	221
SspMI	CTAG	1 cut(s)	1385
SstI	GAGCTC	1 cut(s)	60
StyD4I	CCNGG	7 cut(s)	132, 133, 285, 1734, 1839, 2169, 2170
StyI	CCWWGG	2 cut(s)	1785, 1797
TaaI	ACNGT	3 cut(s)	1518, 1722, 1751
TaiI	ACGT	3 cut(s)	314, 1137, 1854
TaqI	TCGA	8 cut(s)	145, 279, 380, 1327, 1645, 1916, 1925, 2015
TasI	AATT	4 cut(s)	1116, 1220, 1391, 1439
TatI	WGTACW	2 cut(s)	1513, 1619
TfiI	GAWTC	6 cut(s)	613, 1003, 1376, 1679, 1913, 1957
Tru1I	TTAA	7 cut(s)	213, 450, 563, 603, 870, 1137, 2209
Tru9I	TTAA	7 cut(s)	213, 450, 563, 603, 870, 1137, 2209
TscAI	CASTG	1 cut(s)	829
TseFI	GTSAC	3 cut(s)	307, 1573, 1654
Tsp45I	GTSAC	3 cut(s)	307, 1573, 1654
TspGWI	ACGGA	2 cut(s)	827, 1835
TspMI	CCCGGG	2 cut(s)	133, 2170
TspRI	CASTG	1 cut(s)	829
VpaK11BI	GGWCC	2 cut(s)	2006, 2174
XapI	RAATTY	1 cut(s)	1391
XhoI	CTCGAG	1 cut(s)	144
XmaI	CCCGGG	2 cut(s)	133, 2170
XmiI	GTMKAC	1 cut(s)	2051
XspI	CTAG	1 cut(s)	1385
ZrmI	AGTACT	2 cut(s)	1515, 1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.