Prupe.4G180000_v2.0.a1

bifunctional methylthioribulose-1-phosphate dehydratase enolase-phosphatase E1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
10668794 .. 10676535
7742 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G180000.1

Sequence Viewer

Length: 1722 bp
ATGGAGCAAATTTTGGTCACACACCTACAAAACAAAAGTAGCCTAGTATTGAAGCTCAAAAATCTCTCTCTCTCTCTCTCTAGACTCGCAATGGCGGCAGTGGCAGTGAACGGAGCGAAACTCGGTACGGCTTCGCAGGCTTACTTGGAAAGCAGAGCAGTGAGCGACACCAAGGTTCTGATATCAGACCTGTGCCGCCAGTTCTACAATCTTGGATGGGTCTCAGGGACTGGTGGTAGCATCACAATCAAAGTTCACGATGATTCTGTGCCTAAGCCCCAACAACTCGTAATCATGTCTCCCTCTGGCGTTCAGAAGGAGAGAATGCTACCAGAGGATATGTATGTGTTGTCTCCAAATGGGTCTATCTTGTCTACTCCATCTCCGAAGCCGTACCCACACAAACCTCCTAAGTGTTCTGATTGTGGTCCACTTTTTATGAAGAATATAGCCAAGAGGCGATTGATTTCGCGGAGAAAAATGTCAAGGAATCTCAATTACAAGGCATATGAGATGCGTAATGCTGGGGCTGTTATTCATAGTCATGGGATAGAATCTTGTCTTGTAACAATGATCAATCCATTAGCAAAAGAATTCCGAATTACTCATATGGAGATGATCAAAGGAATCCAAGGGCATGGTTATTATGATGAACTTGTGGTTCCAATAATAGAGAACACTGCCTATGAATATGAGCTGACAGAGTCTCTTGCCAAAGCTATTGAAGCCTACCCAAAAACAACAGCTGTGCTTGTTCGTAATCATGGCATCTATATATGGGGAGACTCATGGATCAGCGCTAAAACTCAGGCTGAATGTTATCACTATCTCTTTGATGCTGCTATCAAACTTAACCAGTTGGGTTTGGACCCGTCTACTCCAATCCATGGTCCTATACAAAATGTCAAAGGAGTTTTAGGAAGTGGTATTCACAGAAACATATCTGTGAATGCTGGGACTGCAGCTTCAGATAATAAATCTGACCCGTCACAACGTTGCATTGTTCTTGACATTGAGGGAACTACTACTCCCATATCGTTTGTGACTGATGTTCTGTTTCCATACGCCCGCAATAATGTTGGGAGGCATTTGTCTGCAACATATGACACTGCAGAAACTCAAGATGACATAAAGTTGTTGCGCTCCCAGGTTCAAGATGACCTGGAAAAAGGTGTTGTTGGTTCTGTTCCCATCCCCTTGGATGATGTAGGGAAAGAGGGGGTTATTGCAGCTTTGGTTGCTAATGTTGAATCGATGATAAAAGCTGATCGGAAGATCACTGCCTTGAAACAGTTGCAAGGACATATCTGGAGAACTGGATATGAAAAGAAGGAATTAGAGGGAGTAGTTTTTGAGGATGTACCAGAAGCTCTTAAGAAATGGCATGATTCTGGCATAAAGGTGTACATATACTCTAGTGGTAGCAGGTTGGCACAGAGACTTATATTTGGCAACTCAAACTATGGGGACCTAAGAGAATATTTGTCTGGATTTTTCGACACCACAGTGGGGAACAAAAGGGAAAGTAGCAGTTATGCTGAAATTGTACAATCAGTTGGAGTTGATAAGCCATCACAGGTTTTATTTGTGACAGATGTCTTTCAAGAAGCTGTAGCTGCAAAGGAAGCAGGATTGGAAGTTATTGTATCTATCCGACCAGGGAATGGACCTCTTCCAGAAAATCATGGGTTCAAAACAGTAAATTCTTTCTCGGAAATCTGA

Protein Analysis

574

Amino Acids

63.01

Weight (kDa)

7.65

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1416
AccB7I CCANNNNNTGG 2 cut(s) 887, 1664
AccI GTMKAC 2 cut(s) 374, 875
AccII CGCG 1 cut(s) 472
AciI CCGC 4 cut(s) 95, 196, 472, 1069
AclI AACGTT 1 cut(s) 994
AclWI GGATC 1 cut(s) 800
AcsI RAATTY 3 cut(s) 9, 593, 1702
AcuI CTGAAG 1 cut(s) 951
AfaI GTAC 5 cut(s) 127, 395, 1362, 1406, 1548
AfeI AGCGCT 1 cut(s) 799
AfiI CCNNNNNNNGG 3 cut(s) 887, 1509, 1664
AflII CTTAAG 1 cut(s) 1373
AgsI TTSAA 7 cut(s) 52, 725, 1154, 1250, 1288, 1604, 1693
AjnI CCWGG 3 cut(s) 1146, 1161, 1657
AleI CACNNNNGTG 1 cut(s) 1505
AloI GAACNNNNNNTCC 2 cut(s) 1012, 1044
Alw26I GTCTC 6 cut(s) 226, 303, 357, 711, 777, 1432
AlwI GGATC 1 cut(s) 800
AlwNI CAGNNNCTG 1 cut(s) 230
Aor51HI AGCGCT 1 cut(s) 799
ApeKI GCWGC 4 cut(s) 839, 962, 1229, 1616
ApoI RAATTY 3 cut(s) 9, 593, 1702
AspLEI GCGC 2 cut(s) 800, 1143
AspS9I GGNCC 5 cut(s) 428, 868, 890, 1468, 1667
AvaII GGWCC 5 cut(s) 428, 868, 890, 1468, 1667
BbvI GCAGC 4 cut(s) 826, 974, 1241, 1603
BccI CCATC 4 cut(s) 210, 388, 1199, 1579
BceAI ACGGC 2 cut(s) 144, 376
BciT130I CCWGG 3 cut(s) 1148, 1163, 1659
BclI TGATCA 2 cut(s) 573, 618
BcoDI GTCTC 6 cut(s) 226, 303, 357, 711, 777, 1432
BfaI CTAG 3 cut(s) 44, 81, 1416
BfmI CTRYAG 3 cut(s) 960, 1110, 1611
BfoI RGCGCY 1 cut(s) 801
BfrI CTTAAG 1 cut(s) 1373
BfuAI ACCTGC 1 cut(s) 1416
BisI GCNGC 6 cut(s) 96, 196, 840, 963, 1230, 1617
BlsI GCNGC 6 cut(s) 97, 197, 841, 964, 1231, 1618
Bme1390I CCNGG 3 cut(s) 1148, 1163, 1659
Bme18I GGWCC 5 cut(s) 428, 868, 890, 1468, 1667
BmgT120I GGNCC 5 cut(s) 428, 868, 890, 1468, 1667
BmiI GGNNCC 3 cut(s) 663, 870, 1469
BmrFI CCNGG 3 cut(s) 1148, 1163, 1659
BmsI GCATC 4 cut(s) 249, 504, 777, 826
BoxI GACNNNNGTC 1 cut(s) 1595
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 1 cut(s) 1330
Bpu10I CCTNAGC 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 1104
Bsa29I ATCGAT 1 cut(s) 1253
BsaI GGTCTC 1 cut(s) 226
BsaJI CCNNGG 6 cut(s) 171, 631, 886, 1146, 1197, 1658
BsaXI ACNNNNNCTCC 4 cut(s) 367, 397, 1012, 1042
Bsc4I CCNNNNNNNGG 3 cut(s) 887, 1509, 1664
Bse1I ACTGG 4 cut(s) 199, 235, 856, 1321
Bse3DI GCAATG 1 cut(s) 96
BseBI CCWGG 3 cut(s) 1148, 1163, 1659
BseCI ATCGAT 1 cut(s) 1253
BseDI CCNNGG 6 cut(s) 171, 631, 886, 1146, 1197, 1658
BseGI GGATG 4 cut(s) 221, 1191, 1207, 1363
BseLI CCNNNNNNNGG 3 cut(s) 887, 1509, 1664
BseMI GCAATG 1 cut(s) 96
BseMII CTCAG 2 cut(s) 237, 821
BseNI ACTGG 4 cut(s) 199, 235, 856, 1321
BseXI GCAGC 4 cut(s) 826, 974, 1241, 1603
BseYI CCCAGC 2 cut(s) 524, 953
Bsh1236I CGCG 1 cut(s) 472
BshVI ATCGAT 1 cut(s) 1253
BslFI GGGAC 3 cut(s) 241, 970, 1481
BslI CCNNNNNNNGG 3 cut(s) 887, 1509, 1664
BsmAI GTCTC 6 cut(s) 226, 303, 357, 711, 777, 1432
BsmFI GGGAC 3 cut(s) 241, 970, 1481
BsmI GAATGC 2 cut(s) 330, 955
Bso31I GGTCTC 1 cut(s) 226
Bsp1407I TGTACA 2 cut(s) 1404, 1546
Bsp143I GATC 5 cut(s) 573, 618, 792, 1267, 1275
Bsp19I CCATGG 1 cut(s) 886
BspACI CCGC 4 cut(s) 95, 196, 472, 1069
BspCNI CTCAG 2 cut(s) 236, 820
BspDI ATCGAT 1 cut(s) 1253
BspFNI CGCG 1 cut(s) 472
BspLI GGNNCC 3 cut(s) 663, 870, 1469
BspMAI CTGCAG 2 cut(s) 964, 1114
BspMI ACCTGC 1 cut(s) 1416
BspPI GGATC 1 cut(s) 800
BspTI CTTAAG 1 cut(s) 1373
BspTNI GGTCTC 1 cut(s) 226
BsrDI GCAATG 1 cut(s) 96
BsrGI TGTACA 2 cut(s) 1404, 1546
BsrI ACTGG 4 cut(s) 199, 235, 856, 1321
BssECI CCNNGG 6 cut(s) 171, 631, 886, 1146, 1197, 1658
BssMI GATC 5 cut(s) 573, 618, 792, 1267, 1275
BssT1I CCWWGG 4 cut(s) 171, 631, 886, 1197
Bst2UI CCWGG 3 cut(s) 1148, 1163, 1659
Bst4CI ACNGT 3 cut(s) 1293, 1507, 1699
Bst6I CTCTTC 1 cut(s) 1677
BstAFI CTTAAG 1 cut(s) 1373
BstAUI TGTACA 2 cut(s) 1404, 1546
BstC8I GCNNGC 2 cut(s) 138, 1069
BstDEI CTNAG 5 cut(s) 223, 273, 411, 807, 1472
BstDSI CCRYGG 1 cut(s) 886
BstF5I GGATG 4 cut(s) 221, 1191, 1207, 1363
BstFNI CGCG 1 cut(s) 472
BstH2I RGCGCY 1 cut(s) 801
BstHHI GCGC 2 cut(s) 800, 1143
BstKTI GATC 5 cut(s) 576, 621, 795, 1270, 1278
BstMAI GTCTC 6 cut(s) 226, 303, 357, 711, 777, 1432
BstMBI GATC 5 cut(s) 573, 618, 792, 1267, 1275
BstMWI GCNNNNNNNGC 8 cut(s) 95, 101, 137, 725, 959, 1238, 1616, 1625
BstNI CCWGG 3 cut(s) 1148, 1163, 1659
BstPAI GACNNNNGTC 1 cut(s) 1595
BstSCI CCNGG 3 cut(s) 1146, 1161, 1657
BstSFI CTRYAG 3 cut(s) 960, 1110, 1611
BstUI CGCG 1 cut(s) 472
BstV1I GCAGC 4 cut(s) 826, 974, 1241, 1603
BstXI CCANNNNNNTGG 2 cut(s) 638, 1198
Bsu15I ATCGAT 1 cut(s) 1253
BsuTUI ATCGAT 1 cut(s) 1253
BtgI CCRYGG 1 cut(s) 886
BtsCI GGATG 4 cut(s) 221, 1191, 1207, 1363
BtsI GCAGTG 6 cut(s) 105, 111, 165, 678, 1107, 1278
BtsIMutI CAGTG 7 cut(s) 105, 111, 165, 678, 1107, 1278, 1512
BveI ACCTGC 1 cut(s) 1416
Cac8I GCNNGC 2 cut(s) 138, 1069
CaiI CAGNNNCTG 1 cut(s) 230
CfoI GCGC 2 cut(s) 800, 1143
Cfr13I GGNCC 5 cut(s) 428, 868, 890, 1468, 1667
ClaI ATCGAT 1 cut(s) 1253
Csp6I GTAC 5 cut(s) 126, 394, 1361, 1405, 1547
CviAII CATG 8 cut(s) 295, 545, 638, 764, 789, 887, 1385, 1685
CviQI GTAC 5 cut(s) 126, 394, 1361, 1405, 1547
DdeI CTNAG 5 cut(s) 223, 273, 411, 807, 1472
DpnI GATC 5 cut(s) 575, 620, 794, 1269, 1277
DpnII GATC 5 cut(s) 573, 618, 792, 1267, 1275
Eam1104I CTCTTC 1 cut(s) 1677
EarI CTCTTC 1 cut(s) 1677
Eco130I CCWWGG 4 cut(s) 171, 631, 886, 1197
Eco31I GGTCTC 1 cut(s) 226
Eco32I GATATC 1 cut(s) 183
Eco47I GGWCC 5 cut(s) 428, 868, 890, 1468, 1667
Eco47III AGCGCT 1 cut(s) 799
Eco57I CTGAAG 1 cut(s) 951
EcoO109I RGGNCCY 1 cut(s) 1468
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 3 cut(s) 1146, 1161, 1657
EcoRV GATATC 1 cut(s) 183
EcoT14I CCWWGG 4 cut(s) 171, 631, 886, 1197
ErhI CCWWGG 4 cut(s) 171, 631, 886, 1197
FaeI CATG 8 cut(s) 298, 548, 641, 767, 792, 890, 1388, 1688
FaqI GGGAC 3 cut(s) 241, 970, 1481
FatI CATG 8 cut(s) 294, 544, 637, 763, 788, 886, 1384, 1684
FauI CCCGC 1 cut(s) 1076
FauNDI CATATG 3 cut(s) 508, 609, 1102
FbaI TGATCA 2 cut(s) 573, 618
FblI GTMKAC 2 cut(s) 374, 875
Fnu4HI GCNGC 6 cut(s) 96, 196, 840, 963, 1230, 1617
FokI GGATG 4 cut(s) 228, 1178, 1214, 1370
Fsp4HI GCNGC 6 cut(s) 96, 196, 840, 963, 1230, 1617
FspBI CTAG 3 cut(s) 44, 81, 1416
GlaI GCGC 2 cut(s) 799, 1142
GluI GCNGC 6 cut(s) 96, 196, 840, 963, 1230, 1617
GsaI CCCAGC 2 cut(s) 528, 957
GsuI CTGGAG 1 cut(s) 1330
HaeII RGCGCY 1 cut(s) 801
HhaI GCGC 2 cut(s) 800, 1143
Hin1II CATG 8 cut(s) 298, 548, 641, 767, 792, 890, 1388, 1688
Hin6I GCGC 2 cut(s) 798, 1141
HinP1I GCGC 2 cut(s) 798, 1141
HinfI GANTC 9 cut(s) 84, 263, 490, 554, 627, 704, 785, 1250, 1388
Hpy166II GTNNAC 6 cut(s) 109, 256, 375, 431, 876, 1405
Hpy188III TCNNGA 9 cut(s) 81, 257, 1007, 1121, 1154, 1309, 1488, 1604, 1676
Hpy8I GTNNAC 6 cut(s) 109, 256, 375, 431, 876, 1405
HpyAV CCTTC 2 cut(s) 310, 1324
HpyCH4III ACNGT 3 cut(s) 1293, 1507, 1699
HpyCH4IV ACGT 1 cut(s) 994
HpyCH4V TGCA 7 cut(s) 962, 999, 1097, 1112, 1229, 1297, 1619
HpyF10VI GCNNNNNNNGC 8 cut(s) 95, 101, 137, 725, 959, 1238, 1616, 1625
HpyF3I CTNAG 5 cut(s) 223, 273, 411, 807, 1472
HpySE526I ACGT 1 cut(s) 994
Hsp92II CATG 8 cut(s) 298, 548, 641, 767, 792, 890, 1388, 1688
HspAI GCGC 2 cut(s) 798, 1141
Ksp22I TGATCA 2 cut(s) 573, 618
Kzo9I GATC 5 cut(s) 573, 618, 792, 1267, 1275
LmnI GCTCC 3 cut(s) 4, 113, 1148
Lsp1109I GCAGC 4 cut(s) 826, 974, 1241, 1603
LweI GCATC 4 cut(s) 249, 504, 777, 826
MaeI CTAG 3 cut(s) 44, 81, 1416
MaeII ACGT 1 cut(s) 994
MaeIII GTNAC 5 cut(s) 16, 565, 987, 1042, 1588
MalI GATC 5 cut(s) 575, 620, 794, 1269, 1277
MboI GATC 5 cut(s) 573, 618, 792, 1267, 1275
MboII GAAGA 3 cut(s) 454, 1285, 1664
MluCI AATT 7 cut(s) 9, 496, 593, 600, 1334, 1542, 1702
MlyI GAGTC 3 cut(s) 78, 713, 779
MmeI TCCRAC 2 cut(s) 1537, 1678
MseI TTAA 2 cut(s) 852, 1374
MslI CAYNNNNRTG 4 cut(s) 543, 944, 1400, 1505
MspA1I CMGCKG 1 cut(s) 746
MspCI CTTAAG 1 cut(s) 1373
MspR9I CCNGG 3 cut(s) 1148, 1163, 1659
Mva1269I GAATGC 2 cut(s) 330, 955
MvaI CCWGG 3 cut(s) 1148, 1163, 1659
MvnI CGCG 1 cut(s) 472
MwoI GCNNNNNNNGC 8 cut(s) 95, 101, 137, 725, 959, 1238, 1616, 1625
NcoI CCATGG 1 cut(s) 886
NdeI CATATG 3 cut(s) 508, 609, 1102
NdeII GATC 5 cut(s) 573, 618, 792, 1267, 1275
NlaIII CATG 8 cut(s) 298, 548, 641, 767, 792, 890, 1388, 1688
NlaIV GGNNCC 3 cut(s) 663, 870, 1469
NmuCI GTSAC 4 cut(s) 16, 987, 1042, 1588
OliI CACNNNNGTG 1 cut(s) 1505
PctI GAATGC 2 cut(s) 330, 955
PfeI GAWTC 6 cut(s) 263, 490, 554, 627, 1250, 1388
PflFI GACNNNGTC 1 cut(s) 703
PflMI CCANNNNNTGG 2 cut(s) 887, 1664
PkrI GCNGC 6 cut(s) 97, 197, 841, 964, 1231, 1618
PleI GAGTC 3 cut(s) 78, 712, 779
PpsI GAGTC 3 cut(s) 78, 712, 779
PpuMI RGGWCCY 1 cut(s) 1468
PshAI GACNNNNGTC 1 cut(s) 1595
Psp1406I AACGTT 1 cut(s) 994
Psp5II RGGWCCY 1 cut(s) 1468
Psp6I CCWGG 3 cut(s) 1146, 1161, 1657
PspFI CCCAGC 2 cut(s) 524, 953
PspGI CCWGG 3 cut(s) 1146, 1161, 1657
PspN4I GGNNCC 3 cut(s) 663, 870, 1469
PspPI GGNCC 5 cut(s) 428, 868, 890, 1468, 1667
PspPPI RGGWCCY 1 cut(s) 1468
PstI CTGCAG 2 cut(s) 964, 1114
PstNI CAGNNNCTG 1 cut(s) 230
PsyI GACNNNGTC 1 cut(s) 703
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 5 cut(s) 127, 395, 1362, 1406, 1548
RsaNI GTAC 5 cut(s) 126, 394, 1361, 1405, 1547
RseI CAYNNNNRTG 4 cut(s) 543, 944, 1400, 1505
SaqAI TTAA 2 cut(s) 852, 1374
SatI GCNGC 6 cut(s) 96, 196, 840, 963, 1230, 1617
Sau3AI GATC 5 cut(s) 573, 618, 792, 1267, 1275
Sau96I GGNCC 5 cut(s) 428, 868, 890, 1468, 1667
SchI GAGTC 3 cut(s) 78, 713, 779
ScrFI CCNGG 3 cut(s) 1148, 1163, 1659
SfaNI GCATC 4 cut(s) 249, 504, 777, 826
SfcI CTRYAG 3 cut(s) 960, 1110, 1611
SinI GGWCC 5 cut(s) 428, 868, 890, 1468, 1667
SmiMI CAYNNNNRTG 4 cut(s) 543, 944, 1400, 1505
SmlI CTYRAG 2 cut(s) 1119, 1373
SmoI CTYRAG 2 cut(s) 1119, 1373
Sse9I AATT 7 cut(s) 9, 496, 593, 600, 1334, 1542, 1702
SsiI CCGC 4 cut(s) 95, 196, 472, 1069
SspI AATATT 1 cut(s) 1481
SspMI CTAG 3 cut(s) 44, 81, 1416
StyD4I CCNGG 3 cut(s) 1146, 1161, 1657
StyI CCWWGG 4 cut(s) 171, 631, 886, 1197
TaaI ACNGT 3 cut(s) 1293, 1507, 1699
TaiI ACGT 1 cut(s) 997
TaqI TCGA 2 cut(s) 1253, 1497
TasI AATT 7 cut(s) 9, 496, 593, 600, 1334, 1542, 1702
TatI WGTACW 2 cut(s) 1404, 1546
TauI GCSGC 2 cut(s) 98, 198
TfiI GAWTC 6 cut(s) 263, 490, 554, 627, 1250, 1388
Tru1I TTAA 2 cut(s) 852, 1374
Tru9I TTAA 2 cut(s) 852, 1374
TscAI CASTG 7 cut(s) 105, 111, 165, 685, 1114, 1285, 1512
TseFI GTSAC 4 cut(s) 16, 987, 1042, 1588
TseI GCWGC 4 cut(s) 839, 962, 1229, 1616
Tsp45I GTSAC 4 cut(s) 16, 987, 1042, 1588
TspDTI ATGAA 5 cut(s) 455, 527, 666, 702, 1338
TspGWI ACGGA 1 cut(s) 126
TspRI CASTG 7 cut(s) 105, 111, 165, 685, 1114, 1285, 1512
Tth111I GACNNNGTC 1 cut(s) 703
Van91I CCANNNNNTGG 2 cut(s) 887, 1664
Vha464I CTTAAG 1 cut(s) 1373
VpaK11BI GGWCC 5 cut(s) 428, 868, 890, 1468, 1667
XapI RAATTY 3 cut(s) 9, 593, 1702
XbaI TCTAGA 1 cut(s) 80
XmiI GTMKAC 2 cut(s) 374, 875
XspI CTAG 3 cut(s) 44, 81, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.