Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0009541

Physical Location & Seq

Genomic Coordinates Reverse (-)

66160528 .. 66167439

Gene Structure 6912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00046780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGCAGCAGTGGCACTGAACGGAGTGAAACTCGGAACGACGTCGCAGGCTTACTTGGAAAGCCAACCAGTCAACGACACCAAGGTTCTGATATCCGACCTGTGCCGCCAGTTCTACAACCTGGGATGGGTGTCGGGGACCGGTGGAAGCATCACAATCAAAGTCCACGATGACTCTGTTCCTAAGCCTCAGCAACTCGTCATCATGTCTCCCTCTGGCGTTCAGAAGGAGAGAATGTTACCAGAGGACATGTATGTGTTATCTCCCACTGGGTCTGTCTTGAGTTCTCCGTCTCCGATGCCCTATCCGAACAAGCCTCCCAAGTGTTCTGACTGTGGTCCACTCTTTATGAAGGCATATGAGATGTGCAATGCGGGAGCTGTTATTCATAGTCATGGCATAGAATCTTGTCTTGTAACCATGATCAACCCATTATCCAAAGAATTTCGAATATCTCTAAGATCAGATGCTTTGGAAACAATTACTCATATGGAGATGATAAAAGGAATCAAAGGGCATGGTTATTATGATGAACTTGTGGTCCCGATAATAGAGAATACTGCCTATGAGTTTGAGCTCACCGAGTCCCTTGCCAAAGCTATTGAAGCATACCCCAAAGCAACAGCTGTGCTTGTTCGTAATCATGGCATCTATGTATGGGGAGACTCTTGGATCAGTGCTAAGACTCAGGCTGAATGTTATCACTATCTCTTTGATGCTGCTATCAAACTGAACCAGTTGGGTTTGGATTGGTCTACTCCACTCCATGGTCCTATACATTTAGGAAGTCGTAAGCACAGAGATATATCTACGAAAGCAGGGACTGTGGATTCAGATAACAAATATGAGCCAGCAAGGCGATGCATTGTTCTTGACATTGAGGGAACTACTACTCCCATATCATTTGTGACTGATGTTCTCTTTCCATATGCTCGCGATAATGTGGGGAGGCATTTGTCTGCAACATACGACGATGCAGAAACAAAGGATGACATAAAATTGTTGCGGTCCCAGGTTCAAGATGACCTGGAAAAAGGCGTTGTTGGTGCTGTTCCCATCCCCTCTGACGAAGCTGGGAAAGAGGAGGTTGTTGGAGCTTTGGTTGCTAATGTTGAATCAATGATAAAAGCTGATCGAAAGATCACTGCATTGAAACAATTGCAAGGTCATATATGGCGAACTGGATTTGAAAAGAACGAATTAAAGGGTGTAGTGTTTGAGGATGTACCAGAAGCTCTGATGAAATGGCATGATCAGGGCATAAAGGTGTACATATACTCCAGCGGTAGCAGGTTGGCTCAAAGGCTTTTATTTGGCTACTCAAACTATGGGGACCTGAGAAAATATTTGTCTGGATTTTTTGACACCACAGTGGGGAACAAAAAAGAAACCAGAAGTTATGCTGAAATCGCAGAATCTGTTGGAGTTGATAGGCCATCAGAGGTTTTGTTTGTGACGGACGTTTTTCAAGAAGCTGTAGCTGCAAAAGCGGCAGGATTGGAAGTGGTTGTTTCTATCAGACCAGGAAATGGGCCTCTTCCAGACTCTCATGGATTTAAGACAATCAATTCTTTCTCAGAGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 map00270 map01100

Pfam Domains

Protein Families

Aldolase_II Hydrolase

Protein Analysis

528

Amino Acids

58.1

Weight (kDa)

5.67

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldolase_II	PF00596	31 - 240	3.7e-33	Class II Aldolase and Adducin N-terminal domain
Hydrolase	PF00702	287 - 499	6.3e-11	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009541)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53850 AT5G53850
fragaria_vesca	FvH4_3g19790 FvH4_3g19790
malus_domestica	MD03G1229100.v1.1 MD11G1249900.v1.1
prunus_persica	Prupe.4G180000_v2.0.a1 Prupe.4G180000_v2.0.a1 Prupe.4G180000_v2.0.a1 Prupe.4G180000_v2.0.a1 Prupe.4G180000_v2.0.a1 Prupe.4G180000_v2.0.a1
pyrus_communis	pycom03g17690
rosa_chinensis	RchiOBHm_Chr5g0033201
rosa_laevigata	RLG00000033457
rosa_multiflora	Rmu_ssc0000299.1_g000003
rosa_roxburghii	Rroxscaffold_1G00046780
rosa_rugosa	Rorug05G0137700 Rorug05G0137800
rosa_samantha	Rh5BG230400 Rh5CG258300
rosa_wichuraiana	Rw5G020980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	44
Acc36I	ACCTGC	1 cut(s)	1281
AccB7I	CCANNNNNTGG	2 cut(s)	767, 1529
AccI	GTMKAC	1 cut(s)	755
AccII	CGCG	1 cut(s)	936
AciI	CCGC	5 cut(s)	106, 374, 1006, 1284, 1490
AclWI	GGATC	1 cut(s)	680
AcsI	RAATTY	1 cut(s)	443
AcyI	GRCGYC	1 cut(s)	41
AfaI	GTAC	2 cut(s)	1227, 1271
AfiI	CCNNNNNNNGG	4 cut(s)	127, 767, 1374, 1529
AflIII	ACRYGT	1 cut(s)	249
AgeI	ACCGGT	1 cut(s)	140
AgsI	TTSAA	6 cut(s)	605, 1019, 1115, 1153, 1190, 1469
AjnI	CCWGG	4 cut(s)	120, 1011, 1026, 1522
AleI	CACNNNNGTG	1 cut(s)	1370
AloI	GAACNNNNNNTCC	4 cut(s)	525, 557, 877, 909
Alw21I	GWGCWC	1 cut(s)	579
Alw26I	GTCTC	3 cut(s)	213, 297, 657
AlwI	GGATC	1 cut(s)	680
AlwNI	CAGNNNCTG	2 cut(s)	824, 1418
AoxI	GGCC	2 cut(s)	1433, 1532
ApeKI	GCWGC	3 cut(s)	5, 719, 1481
ApoI	RAATTY	1 cut(s)	443
AsiGI	ACCGGT	1 cut(s)	140
AspS9I	GGNCC	7 cut(s)	138, 338, 541, 770, 1008, 1333, 1532
AsuHPI	GGTGA	1 cut(s)	571
AsuII	TTCGAA	1 cut(s)	448
AvaII	GGWCC	6 cut(s)	138, 338, 541, 770, 1008, 1333
BanII	GRGCYC	1 cut(s)	579
Bbv12I	GWGCWC	1 cut(s)	579
BbvCI	CCTCAGC	1 cut(s)	189
BbvI	GCAGC	3 cut(s)	17, 706, 1468
BccI	CCATC	3 cut(s)	120, 1064, 1444
BcgI	CGANNNNNNTGC	2 cut(s)	572, 606
BciT130I	CCWGG	4 cut(s)	122, 1013, 1028, 1524
BclI	TGATCA	2 cut(s)	423, 1252
BcoDI	GTCTC	3 cut(s)	213, 297, 657
BfmI	CTRYAG	1 cut(s)	1476
BfuAI	ACCTGC	1 cut(s)	1281
BglI	GCCNNNNNGGC	1 cut(s)	856
BglII	AGATCT	1 cut(s)	1581
BisI	GCNGC	5 cut(s)	6, 106, 720, 1482, 1491
BlsI	GCNGC	5 cut(s)	7, 107, 721, 1483, 1492
Bme1390I	CCNGG	4 cut(s)	122, 1013, 1028, 1524
Bme18I	GGWCC	6 cut(s)	138, 338, 541, 770, 1008, 1333
BmgT120I	GGNCC	7 cut(s)	138, 338, 541, 770, 1008, 1333, 1532
BmiI	GGNNCC	4 cut(s)	139, 543, 1010, 1334
BmrFI	CCNGG	4 cut(s)	122, 1013, 1028, 1524
BmrI	ACTGGG	1 cut(s)	279
BmsI	GCATC	7 cut(s)	159, 288, 457, 657, 706, 851, 964
BmuI	ACTGGG	1 cut(s)	279
BoxI	GACNNNNGTC	1 cut(s)	336
BplI	GAGNNNNNCTC	2 cut(s)	15, 47
BpmI	CTGGAG	1 cut(s)	1264
Bpu10I	CCTNAGC	2 cut(s)	183, 189
Bpu14I	TTCGAA	1 cut(s)	448
BpuEI	CTTGAG	1 cut(s)	301
BsaHI	GRCGYC	1 cut(s)	41
BsaJI	CCNNGG	4 cut(s)	81, 121, 766, 1011
BsaWI	WCCGGW	1 cut(s)	140
BsaXI	ACNNNNNCTCC	8 cut(s)	221, 251, 877, 907, 1086, 1116, 1262, 1292
Bsc4I	CCNNNNNNNGG	4 cut(s)	127, 767, 1374, 1529
Bse118I	RCCGGY	1 cut(s)	140
Bse1I	ACTGG	5 cut(s)	68, 109, 274, 736, 1186
Bse3DI	GCAATG	1 cut(s)	376
BseBI	CCWGG	4 cut(s)	122, 1013, 1028, 1524
BseDI	CCNNGG	4 cut(s)	81, 121, 766, 1011
BseGI	GGATG	4 cut(s)	131, 994, 1056, 1228
BseLI	CCNNNNNNNGG	4 cut(s)	127, 767, 1374, 1529
BseMI	GCAATG	1 cut(s)	376
BseMII	CTCAG	3 cut(s)	203, 701, 1328
BseNI	ACTGG	5 cut(s)	68, 109, 274, 736, 1186
BseRI	GAGGAG	1 cut(s)	1097
BseXI	GCAGC	3 cut(s)	17, 706, 1468
BseYI	CCCAGC	1 cut(s)	1073
Bsh1236I	CGCG	1 cut(s)	936
BshFI	GGCC	2 cut(s)	1435, 1534
BshTI	ACCGGT	1 cut(s)	140
BsiHKAI	GWGCWC	1 cut(s)	579
BsiSI	CCGG	1 cut(s)	141
BslFI	GGGAC	6 cut(s)	151, 527, 571, 835, 994, 1346
BslI	CCNNNNNNNGG	4 cut(s)	127, 767, 1374, 1529
BsmAI	GTCTC	3 cut(s)	213, 297, 657
BsmBI	CGTCTC	1 cut(s)	297
BsmFI	GGGAC	6 cut(s)	151, 527, 571, 835, 994, 1346
BsnI	GGCC	2 cut(s)	1435, 1534
Bsp119I	TTCGAA	1 cut(s)	448
Bsp1286I	GDGCHC	1 cut(s)	579
Bsp1407I	TGTACA	1 cut(s)	1269
Bsp143I	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
Bsp19I	CCATGG	1 cut(s)	766
Bsp68I	TCGCGA	1 cut(s)	936
BspACI	CCGC	5 cut(s)	106, 374, 1006, 1284, 1490
BspANI	GGCC	2 cut(s)	1435, 1534
BspCNI	CTCAG	3 cut(s)	202, 700, 1329
BspFNI	CGCG	1 cut(s)	936
BspLI	GGNNCC	4 cut(s)	139, 543, 1010, 1334
BspMI	ACCTGC	1 cut(s)	1281
BspPI	GGATC	1 cut(s)	680
BspT104I	TTCGAA	1 cut(s)	448
BsrDI	GCAATG	1 cut(s)	376
BsrFI	RCCGGY	1 cut(s)	140
BsrGI	TGTACA	1 cut(s)	1269
BsrI	ACTGG	5 cut(s)	68, 109, 274, 736, 1186
BssAI	RCCGGY	1 cut(s)	140
BssECI	CCNNGG	4 cut(s)	81, 121, 766, 1011
BssMI	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
BssNI	GRCGYC	1 cut(s)	41
BssT1I	CCWWGG	2 cut(s)	81, 766
Bst2UI	CCWGG	4 cut(s)	122, 1013, 1028, 1524
Bst4CI	ACNGT	3 cut(s)	335, 826, 1372
Bst6I	CTCTTC	1 cut(s)	1542
BstACI	GRCGYC	1 cut(s)	41
BstAUI	TGTACA	1 cut(s)	1269
BstBI	TTCGAA	1 cut(s)	448
BstC8I	GCNNGC	3 cut(s)	48, 852, 934
BstDEI	CTNAG	7 cut(s)	183, 189, 458, 681, 687, 1337, 1576
BstDSI	CCRYGG	1 cut(s)	766
BstF5I	GGATG	4 cut(s)	131, 994, 1056, 1228
BstFNI	CGCG	1 cut(s)	936
BstKTI	GATC	7 cut(s)	426, 464, 675, 1135, 1143, 1255, 1584
BstMAI	GTCTC	3 cut(s)	213, 297, 657
BstMBI	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 605, 856, 1103, 1409, 1481, 1487, 1490
BstNI	CCWGG	4 cut(s)	122, 1013, 1028, 1524
BstNSI	RCATGY	1 cut(s)	253
BstPAI	GACNNNNGTC	1 cut(s)	336
BstSCI	CCNGG	4 cut(s)	120, 1011, 1026, 1522
BstSFI	CTRYAG	1 cut(s)	1476
BstUI	CGCG	1 cut(s)	936
BstV1I	GCAGC	3 cut(s)	17, 706, 1468
BstX2I	RGATCY	1 cut(s)	1581
BstYI	RGATCY	1 cut(s)	1581
BsuRI	GGCC	2 cut(s)	1435, 1534
BtgI	CCRYGG	1 cut(s)	766
BtgZI	GCGATG	1 cut(s)	874
BtsCI	GGATG	4 cut(s)	131, 994, 1056, 1228
BtsI	GCAGTG	2 cut(s)	15, 1143
BtsIMutI	CAGTG	6 cut(s)	14, 15, 267, 682, 1143, 1377
BtuMI	TCGCGA	1 cut(s)	936
BveI	ACCTGC	1 cut(s)	1281
Cac8I	GCNNGC	3 cut(s)	48, 852, 934
CaiI	CAGNNNCTG	2 cut(s)	824, 1418
Cfr10I	RCCGGY	1 cut(s)	140
Cfr13I	GGNCC	7 cut(s)	138, 338, 541, 770, 1008, 1333, 1532
Csp6I	GTAC	2 cut(s)	1226, 1270
CspAI	ACCGGT	1 cut(s)	140
CviAII	CATG	9 cut(s)	205, 250, 395, 421, 518, 644, 767, 1250, 1550
CviQI	GTAC	2 cut(s)	1226, 1270
DdeI	CTNAG	7 cut(s)	183, 189, 458, 681, 687, 1337, 1576
DpnI	GATC	7 cut(s)	425, 463, 674, 1134, 1142, 1254, 1583
DpnII	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
Eam1104I	CTCTTC	1 cut(s)	1542
EarI	CTCTTC	1 cut(s)	1542
Ecl136II	GAGCTC	1 cut(s)	577
Eco130I	CCWWGG	2 cut(s)	81, 766
Eco24I	GRGCYC	1 cut(s)	579
Eco32I	GATATC	1 cut(s)	93
Eco47I	GGWCC	6 cut(s)	138, 338, 541, 770, 1008, 1333
Eco53kI	GAGCTC	1 cut(s)	577
EcoICRI	GAGCTC	1 cut(s)	577
EcoO109I	RGGNCCY	1 cut(s)	1333
EcoRII	CCWGG	4 cut(s)	120, 1011, 1026, 1522
EcoRV	GATATC	1 cut(s)	93
EcoT14I	CCWWGG	2 cut(s)	81, 766
EcoT22I	ATGCAT	1 cut(s)	866
EcoT38I	GRGCYC	1 cut(s)	579
ErhI	CCWWGG	2 cut(s)	81, 766
Esp3I	CGTCTC	1 cut(s)	297
FaeI	CATG	9 cut(s)	208, 253, 398, 424, 521, 647, 770, 1253, 1553
FaqI	GGGAC	6 cut(s)	151, 527, 571, 835, 994, 1346
FatI	CATG	9 cut(s)	204, 249, 394, 420, 517, 643, 766, 1249, 1549
FauI	CCCGC	1 cut(s)	367
FauNDI	CATATG	3 cut(s)	358, 489, 928
FbaI	TGATCA	2 cut(s)	423, 1252
FblI	GTMKAC	1 cut(s)	755
Fnu4HI	GCNGC	5 cut(s)	6, 106, 720, 1482, 1491
FokI	GGATG	4 cut(s)	138, 1001, 1043, 1235
FriOI	GRGCYC	1 cut(s)	579
Fsp4HI	GCNGC	5 cut(s)	6, 106, 720, 1482, 1491
GluI	GCNGC	5 cut(s)	6, 106, 720, 1482, 1491
GsaI	CCCAGC	1 cut(s)	1077
GsuI	CTGGAG	1 cut(s)	1264
HaeIII	GGCC	2 cut(s)	1435, 1534
HapII	CCGG	1 cut(s)	141
Hin1I	GRCGYC	1 cut(s)	41
Hin1II	CATG	9 cut(s)	208, 253, 398, 424, 521, 647, 770, 1253, 1553
HincII	GTYRAC	1 cut(s)	73
HindII	GTYRAC	1 cut(s)	73
HpaII	CCGG	1 cut(s)	141
HphI	GGTGA	1 cut(s)	571
Hpy166II	GTNNAC	5 cut(s)	73, 166, 341, 756, 1270
Hpy188III	TCNNGA	8 cut(s)	280, 544, 872, 935, 1019, 1353, 1469, 1541
Hpy8I	GTNNAC	5 cut(s)	73, 166, 341, 756, 1270
Hpy99I	CGWCG	3 cut(s)	43, 46, 974
HpyAV	CCTTC	2 cut(s)	220, 346
HpyCH4III	ACNGT	3 cut(s)	335, 826, 1372
HpyCH4IV	ACGT	2 cut(s)	41, 1461
HpyCH4V	TGCA	7 cut(s)	369, 864, 962, 977, 1148, 1162, 1484
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 605, 856, 1103, 1409, 1481, 1487, 1490
HpyF3I	CTNAG	7 cut(s)	183, 189, 458, 681, 687, 1337, 1576
HpySE526I	ACGT	2 cut(s)	41, 1461
Hsp92I	GRCGYC	1 cut(s)	41
Hsp92II	CATG	9 cut(s)	208, 253, 398, 424, 521, 647, 770, 1253, 1553
Ksp22I	TGATCA	2 cut(s)	423, 1252
Kzo9I	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
LmnI	GCTCC	2 cut(s)	377, 1094
Lsp1109I	GCAGC	3 cut(s)	17, 706, 1468
LweI	GCATC	7 cut(s)	159, 288, 457, 657, 706, 851, 964
MaeII	ACGT	2 cut(s)	41, 1461
MaeIII	GTNAC	4 cut(s)	237, 415, 907, 1453
MalI	GATC	7 cut(s)	425, 463, 674, 1134, 1142, 1254, 1583
MboI	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
MboII	GAAGA	1 cut(s)	1529
MfeI	CAATTG	1 cut(s)	1157
MflI	RGATCY	1 cut(s)	1581
MhlI	GDGCHC	1 cut(s)	579
MluCI	AATT	6 cut(s)	443, 480, 998, 1157, 1199, 1567
MlyI	GAGTC	5 cut(s)	167, 593, 659, 679, 1538
MmeI	TCCRAC	3 cut(s)	120, 1072, 1402
Mph1103I	ATGCAT	1 cut(s)	866
MseI	TTAA	2 cut(s)	1202, 1557
MslI	CAYNNNNRTG	4 cut(s)	254, 393, 1265, 1370
MspA1I	CMGCKG	2 cut(s)	626, 1284
MspI	CCGG	1 cut(s)	141
MspR9I	CCNGG	4 cut(s)	122, 1013, 1028, 1524
MunI	CAATTG	1 cut(s)	1157
MvaI	CCWGG	4 cut(s)	122, 1013, 1028, 1524
MvnI	CGCG	1 cut(s)	936
MwoI	GCNNNNNNNGC	8 cut(s)	11, 605, 856, 1103, 1409, 1481, 1487, 1490
NcoI	CCATGG	1 cut(s)	766
NdeI	CATATG	3 cut(s)	358, 489, 928
NdeII	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
NlaIII	CATG	9 cut(s)	208, 253, 398, 424, 521, 647, 770, 1253, 1553
NlaIV	GGNNCC	4 cut(s)	139, 543, 1010, 1334
NmuCI	GTSAC	2 cut(s)	907, 1453
NruI	TCGCGA	1 cut(s)	936
NsiI	ATGCAT	1 cut(s)	866
NspI	RCATGY	1 cut(s)	253
NspV	TTCGAA	1 cut(s)	448
OliI	CACNNNNGTG	1 cut(s)	1370
PciI	ACATGT	1 cut(s)	249
PfeI	GAWTC	5 cut(s)	404, 507, 830, 1115, 1415
PflMI	CCANNNNNTGG	2 cut(s)	767, 1529
PinAI	ACCGGT	1 cut(s)	140
PkrI	GCNGC	5 cut(s)	7, 107, 721, 1483, 1492
PleI	GAGTC	5 cut(s)	167, 592, 659, 679, 1538
PpsI	GAGTC	5 cut(s)	167, 592, 659, 679, 1538
PpuMI	RGGWCCY	1 cut(s)	1333
PscI	ACATGT	1 cut(s)	249
PshAI	GACNNNNGTC	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	1333
Psp6I	CCWGG	4 cut(s)	120, 1011, 1026, 1522
PspFI	CCCAGC	1 cut(s)	1073
PspGI	CCWGG	4 cut(s)	120, 1011, 1026, 1522
PspN4I	GGNNCC	4 cut(s)	139, 543, 1010, 1334
PspPI	GGNCC	7 cut(s)	138, 338, 541, 770, 1008, 1333, 1532
PspPPI	RGGWCCY	1 cut(s)	1333
PstNI	CAGNNNCTG	2 cut(s)	824, 1418
PsuI	RGATCY	1 cut(s)	1581
PvuII	CAGCTG	1 cut(s)	626
RruI	TCGCGA	1 cut(s)	936
RsaI	GTAC	2 cut(s)	1227, 1271
RsaNI	GTAC	2 cut(s)	1226, 1270
RseI	CAYNNNNRTG	4 cut(s)	254, 393, 1265, 1370
SacI	GAGCTC	1 cut(s)	579
SaqAI	TTAA	2 cut(s)	1202, 1557
SatI	GCNGC	5 cut(s)	6, 106, 720, 1482, 1491
Sau3AI	GATC	7 cut(s)	423, 461, 672, 1132, 1140, 1252, 1581
Sau96I	GGNCC	7 cut(s)	138, 338, 541, 770, 1008, 1333, 1532
SchI	GAGTC	5 cut(s)	167, 593, 659, 679, 1538
ScrFI	CCNGG	4 cut(s)	122, 1013, 1028, 1524
SduI	GDGCHC	1 cut(s)	579
SfaNI	GCATC	7 cut(s)	159, 288, 457, 657, 706, 851, 964
SfcI	CTRYAG	1 cut(s)	1476
SfuI	TTCGAA	1 cut(s)	448
SinI	GGWCC	6 cut(s)	138, 338, 541, 770, 1008, 1333
SmiMI	CAYNNNNRTG	4 cut(s)	254, 393, 1265, 1370
SmlI	CTYRAG	1 cut(s)	280
SmoI	CTYRAG	1 cut(s)	280
Sse9I	AATT	6 cut(s)	443, 480, 998, 1157, 1199, 1567
SsiI	CCGC	5 cut(s)	106, 374, 1006, 1284, 1490
SspI	AATATT	1 cut(s)	1346
SstI	GAGCTC	1 cut(s)	579
StyD4I	CCNGG	4 cut(s)	120, 1011, 1026, 1522
StyI	CCWWGG	2 cut(s)	81, 766
TaaI	ACNGT	3 cut(s)	335, 826, 1372
TaiI	ACGT	2 cut(s)	44, 1464
TaqI	TCGA	2 cut(s)	448, 1135
TasI	AATT	6 cut(s)	443, 480, 998, 1157, 1199, 1567
TatI	WGTACW	1 cut(s)	1269
TauI	GCSGC	2 cut(s)	108, 1493
TfiI	GAWTC	5 cut(s)	404, 507, 830, 1115, 1415
Tru1I	TTAA	2 cut(s)	1202, 1557
Tru9I	TTAA	2 cut(s)	1202, 1557
TscAI	CASTG	6 cut(s)	15, 21, 274, 682, 1150, 1377
TseFI	GTSAC	2 cut(s)	907, 1453
TseI	GCWGC	3 cut(s)	5, 719, 1481
Tsp45I	GTSAC	2 cut(s)	907, 1453
TspDTI	ATGAA	4 cut(s)	365, 377, 546, 1256
TspGWI	ACGGA	3 cut(s)	36, 279, 1472
TspRI	CASTG	6 cut(s)	15, 21, 274, 682, 1150, 1377
Van91I	CCANNNNNTGG	2 cut(s)	767, 1529
VpaK11BI	GGWCC	6 cut(s)	138, 338, 541, 770, 1008, 1333
XapI	RAATTY	1 cut(s)	443
XceI	RCATGY	1 cut(s)	253
XmiI	GTMKAC	1 cut(s)	755
ZraI	GACGTC	1 cut(s)	42
Zsp2I	ATGCAT	1 cut(s)	866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.