PHD zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17850 |
| prunus_persica | Prupe.5G038800_v2.0.a1 Prupe.5G038800_v2.0.a1 |
| rosa_roxburghii | Rroxscaffold_3G00249480 |
| rosa_samantha | Rh7AG246500 Rh7BG241600 Rh7CG262200 Rh7DG252800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 525 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2347, 2621 |
| Acc36I | ACCTGC | 2 cut(s) | 525, 562 |
| AccB1I | GGYRCC | 1 cut(s) | 2536 |
| AccBSI | CCGCTC | 1 cut(s) | 699 |
| AccI | GTMKAC | 2 cut(s) | 1191, 1826 |
| AciI | CCGC | 2 cut(s) | 113, 699 |
| AclWI | GGATC | 5 cut(s) | 360, 460, 694, 2421, 2499 |
| AcoI | YGGCCR | 2 cut(s) | 1501, 1913 |
| AcsI | RAATTY | 6 cut(s) | 11, 190, 226, 237, 1067, 1184 |
| AcuI | CTGAAG | 2 cut(s) | 717, 2242 |
| AdeI | CACNNNGTG | 2 cut(s) | 1242, 1436 |
| AfaI | GTAC | 7 cut(s) | 930, 1037, 1316, 1860, 1929, 2476, 2678 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 269, 1324, 2241 |
| AflIII | ACRYGT | 1 cut(s) | 527 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 836 |
| AhlI | ACTAGT | 1 cut(s) | 1466 |
| AjnI | CCWGG | 4 cut(s) | 592, 899, 1268, 2512 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 257, 289 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2566, 2598 |
| Alw21I | GWGCWC | 3 cut(s) | 558, 1102, 1910 |
| Alw26I | GTCTC | 4 cut(s) | 116, 1490, 2455, 2629 |
| AlwI | GGATC | 5 cut(s) | 360, 460, 694, 2421, 2499 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 851 |
| AoxI | GGCC | 4 cut(s) | 296, 1501, 1685, 1913 |
| ApeKI | GCWGC | 7 cut(s) | 54, 57, 161, 918, 1631, 2182, 2653 |
| ApoI | RAATTY | 6 cut(s) | 11, 190, 226, 237, 1067, 1184 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 588, 1702 |
| AspLEI | GCGC | 1 cut(s) | 2653 |
| AspS9I | GGNCC | 1 cut(s) | 830 |
| AsuHPI | GGTGA | 6 cut(s) | 1013, 1384, 1607, 1830, 2605, 2652 |
| AvaII | GGWCC | 1 cut(s) | 830 |
| AxyI | CCTNAGG | 2 cut(s) | 300, 2100 |
| BaeGI | GKGCMC | 1 cut(s) | 2539 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1287, 1320 |
| BalI | TGGCCA | 2 cut(s) | 1503, 1915 |
| BanI | GGYRCC | 1 cut(s) | 2536 |
| BanII | GRGCYC | 1 cut(s) | 877 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1374, 1406, 1851, 1883 |
| BauI | CACGAG | 1 cut(s) | 1424 |
| Bbv12I | GWGCWC | 3 cut(s) | 558, 1102, 1910 |
| BbvI | GCAGC | 7 cut(s) | 66, 69, 173, 930, 1643, 2194, 2640 |
| BccI | CCATC | 9 cut(s) | 443, 539, 574, 1326, 1799, 2054, 2092, 2245, 2665 |
| BceAI | ACGGC | 1 cut(s) | 1297 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1181, 1215 |
| BciT130I | CCWGG | 4 cut(s) | 594, 901, 1270, 2514 |
| BciVI | GTATCC | 1 cut(s) | 493 |
| BclI | TGATCA | 1 cut(s) | 1615 |
| BcoDI | GTCTC | 4 cut(s) | 116, 1490, 2455, 2629 |
| BcuI | ACTAGT | 1 cut(s) | 1466 |
| BfaI | CTAG | 7 cut(s) | 36, 774, 813, 909, 1455, 1467, 2666 |
| BfmI | CTRYAG | 5 cut(s) | 117, 834, 916, 1990, 2481 |
| BfuAI | ACCTGC | 2 cut(s) | 525, 562 |
| BfuI | GTATCC | 1 cut(s) | 493 |
| BglII | AGATCT | 1 cut(s) | 1978 |
| BisI | GCNGC | 8 cut(s) | 55, 58, 114, 162, 919, 1632, 2183, 2654 |
| BlsI | GCNGC | 8 cut(s) | 56, 59, 115, 163, 920, 1633, 2184, 2655 |
| BmcAI | AGTACT | 1 cut(s) | 2678 |
| Bme1390I | CCNGG | 4 cut(s) | 594, 901, 1270, 2514 |
| Bme18I | GGWCC | 1 cut(s) | 830 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 836 |
| BmgT120I | GGNCC | 1 cut(s) | 830 |
| BmiI | GGNNCC | 2 cut(s) | 906, 2538 |
| BmrFI | CCNGG | 4 cut(s) | 594, 901, 1270, 2514 |
| BmsI | GCATC | 8 cut(s) | 382, 718, 931, 1071, 1460, 1588, 2301, 2454 |
| BpmI | CTGGAG | 2 cut(s) | 615, 1514 |
| BpuEI | CTTGAG | 7 cut(s) | 159, 1307, 1543, 1924, 2003, 2312, 2490 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2199 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 5 cut(s) | 150, 899, 900, 984, 1792 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 131, 161 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 269, 1324, 2241 |
| Bse118I | RCCGGY | 1 cut(s) | 1232 |
| Bse1I | ACTGG | 3 cut(s) | 92, 608, 1504 |
| Bse21I | CCTNAGG | 2 cut(s) | 300, 2100 |
| Bse3DI | GCAATG | 3 cut(s) | 52, 816, 2117 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2199 |
| BseBI | CCWGG | 4 cut(s) | 594, 901, 1270, 2514 |
| BseDI | CCNNGG | 5 cut(s) | 150, 899, 900, 984, 1792 |
| BseJI | GATNNNNATC | 1 cut(s) | 2199 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 269, 1324, 2241 |
| BseMI | GCAATG | 3 cut(s) | 52, 816, 2117 |
| BseMII | CTCAG | 5 cut(s) | 291, 630, 1382, 1886, 2091 |
| BseNI | ACTGG | 3 cut(s) | 92, 608, 1504 |
| BseRI | GAGGAG | 3 cut(s) | 42, 317, 527 |
| BseSI | GKGCMC | 1 cut(s) | 2539 |
| BseXI | GCAGC | 7 cut(s) | 66, 69, 173, 930, 1643, 2194, 2640 |
| BsgI | GTGCAG | 1 cut(s) | 73 |
| BshFI | GGCC | 4 cut(s) | 298, 1503, 1687, 1915 |
| BshNI | GGYRCC | 1 cut(s) | 2536 |
| BsiHKAI | GWGCWC | 3 cut(s) | 558, 1102, 1910 |
| BsiSI | CCGG | 1 cut(s) | 1233 |
| BsiWI | CGTACG | 1 cut(s) | 1927 |
| BslFI | GGGAC | 1 cut(s) | 1718 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 269, 1324, 2241 |
| BsmAI | GTCTC | 4 cut(s) | 116, 1490, 2455, 2629 |
| BsmFI | GGGAC | 1 cut(s) | 1718 |
| BsmI | GAATGC | 3 cut(s) | 1672, 1815, 2024 |
| BsnI | GGCC | 4 cut(s) | 298, 1503, 1687, 1915 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 5 cut(s) | 558, 877, 1102, 1910, 2539 |
| Bsp19I | CCATGG | 1 cut(s) | 150 |
| BspACI | CCGC | 2 cut(s) | 113, 699 |
| BspANI | GGCC | 4 cut(s) | 298, 1503, 1687, 1915 |
| BspCNI | CTCAG | 5 cut(s) | 292, 631, 1381, 1885, 2092 |
| BspHI | TCATGA | 2 cut(s) | 1486, 1549 |
| BspLI | GGNNCC | 2 cut(s) | 906, 2538 |
| BspMAI | CTGCAG | 1 cut(s) | 920 |
| BspMI | ACCTGC | 2 cut(s) | 525, 562 |
| BspPI | GGATC | 5 cut(s) | 360, 460, 694, 2421, 2499 |
| BspQI | GCTCTTC | 1 cut(s) | 2310 |
| BspT107I | GGYRCC | 1 cut(s) | 2536 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrBI | CCGCTC | 1 cut(s) | 699 |
| BsrDI | GCAATG | 3 cut(s) | 52, 816, 2117 |
| BsrFI | RCCGGY | 1 cut(s) | 1232 |
| BsrI | ACTGG | 3 cut(s) | 92, 608, 1504 |
| BssAI | RCCGGY | 1 cut(s) | 1232 |
| BssECI | CCNNGG | 5 cut(s) | 150, 899, 900, 984, 1792 |
| BssSI | CACGAG | 1 cut(s) | 1424 |
| BssT1I | CCWWGG | 2 cut(s) | 150, 1792 |
| Bst2BI | CACGAG | 1 cut(s) | 1424 |
| Bst2UI | CCWGG | 4 cut(s) | 594, 901, 1270, 2514 |
| Bst4CI | ACNGT | 7 cut(s) | 443, 838, 928, 1155, 1831, 2073, 2300 |
| Bst6I | CTCTTC | 3 cut(s) | 1780, 2310, 2458 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 51, 1637 |
| BstC8I | GCNNGC | 7 cut(s) | 309, 522, 569, 823, 1234, 1611, 1815 |
| BstDEI | CTNAG | 7 cut(s) | 300, 429, 639, 1368, 1872, 2045, 2100 |
| BstDSI | CCRYGG | 2 cut(s) | 150, 984 |
| BstEII | GGTNACC | 1 cut(s) | 1001 |
| BstHHI | GCGC | 1 cut(s) | 2653 |
| BstMAI | GTCTC | 4 cut(s) | 116, 1490, 2455, 2629 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 51, 304, 430, 822, 1426, 1637, 1709, 2048 |
| BstNI | CCWGG | 4 cut(s) | 594, 901, 1270, 2514 |
| BstNSI | RCATGY | 5 cut(s) | 45, 531, 571, 1613, 2095 |
| BstPI | GGTNACC | 1 cut(s) | 1001 |
| BstSCI | CCNGG | 4 cut(s) | 592, 899, 1268, 2512 |
| BstSFI | CTRYAG | 5 cut(s) | 117, 834, 916, 1990, 2481 |
| BstSLI | GKGCMC | 1 cut(s) | 2539 |
| BstV1I | GCAGC | 7 cut(s) | 66, 69, 173, 930, 1643, 2194, 2640 |
| BstX2I | RGATCY | 1 cut(s) | 1978 |
| BstYI | RGATCY | 1 cut(s) | 1978 |
| Bsu36I | CCTNAGG | 2 cut(s) | 300, 2100 |
| BsuI | GTATCC | 1 cut(s) | 493 |
| BsuRI | GGCC | 4 cut(s) | 298, 1503, 1687, 1915 |
| BtgI | CCRYGG | 2 cut(s) | 150, 984 |
| BtsIMutI | CAGTG | 2 cut(s) | 99, 2305 |
| BveI | ACCTGC | 2 cut(s) | 525, 562 |
| Cac8I | GCNNGC | 7 cut(s) | 309, 522, 569, 823, 1234, 1611, 1815 |
| CaiI | CAGNNNCTG | 1 cut(s) | 851 |
| CciI | TCATGA | 2 cut(s) | 1486, 1549 |
| CfoI | GCGC | 1 cut(s) | 2653 |
| Cfr10I | RCCGGY | 1 cut(s) | 1232 |
| Cfr13I | GGNCC | 1 cut(s) | 830 |
| Csp6I | GTAC | 7 cut(s) | 929, 1036, 1315, 1859, 1928, 2475, 2677 |
| CviQI | GTAC | 7 cut(s) | 929, 1036, 1315, 1859, 1928, 2475, 2677 |
| DdeI | CTNAG | 7 cut(s) | 300, 429, 639, 1368, 1872, 2045, 2100 |
| DraIII | CACNNNGTG | 2 cut(s) | 1242, 1436 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2347, 2621 |
| DriI | GACNNNNNGTC | 1 cut(s) | 836 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2347, 2621 |
| EaeI | YGGCCR | 2 cut(s) | 1501, 1913 |
| Eam1104I | CTCTTC | 3 cut(s) | 1780, 2310, 2458 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 836 |
| EarI | CTCTTC | 3 cut(s) | 1780, 2310, 2458 |
| Eco130I | CCWWGG | 2 cut(s) | 150, 1792 |
| Eco147I | AGGCCT | 1 cut(s) | 1687 |
| Eco24I | GRGCYC | 1 cut(s) | 877 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| Eco32I | GATATC | 1 cut(s) | 490 |
| Eco47I | GGWCC | 1 cut(s) | 830 |
| Eco57I | CTGAAG | 2 cut(s) | 717, 2242 |
| Eco81I | CCTNAGG | 2 cut(s) | 300, 2100 |
| Eco91I | GGTNACC | 1 cut(s) | 1001 |
| EcoO109I | RGGNCCY | 1 cut(s) | 830 |
| EcoO65I | GGTNACC | 1 cut(s) | 1001 |
| EcoRII | CCWGG | 4 cut(s) | 592, 899, 1268, 2512 |
| EcoRV | GATATC | 1 cut(s) | 490 |
| EcoT14I | CCWWGG | 2 cut(s) | 150, 1792 |
| EcoT22I | ATGCAT | 2 cut(s) | 84, 2024 |
| EcoT38I | GRGCYC | 1 cut(s) | 877 |
| ErhI | CCWWGG | 2 cut(s) | 150, 1792 |
| FaqI | GGGAC | 1 cut(s) | 1718 |
| FauNDI | CATATG | 1 cut(s) | 1751 |
| FbaI | TGATCA | 1 cut(s) | 1615 |
| FblI | GTMKAC | 2 cut(s) | 1191, 1826 |
| Fnu4HI | GCNGC | 8 cut(s) | 55, 58, 114, 162, 919, 1632, 2183, 2654 |
| FriOI | GRGCYC | 1 cut(s) | 877 |
| Fsp4HI | GCNGC | 8 cut(s) | 55, 58, 114, 162, 919, 1632, 2183, 2654 |
| FspBI | CTAG | 7 cut(s) | 36, 774, 813, 909, 1455, 1467, 2666 |
| GlaI | GCGC | 1 cut(s) | 2652 |
| GluI | GCNGC | 8 cut(s) | 55, 58, 114, 162, 919, 1632, 2183, 2654 |
| GsuI | CTGGAG | 2 cut(s) | 615, 1514 |
| HaeIII | GGCC | 4 cut(s) | 298, 1503, 1687, 1915 |
| HapII | CCGG | 1 cut(s) | 1233 |
| HhaI | GCGC | 1 cut(s) | 2653 |
| Hin6I | GCGC | 1 cut(s) | 2651 |
| HinP1I | GCGC | 1 cut(s) | 2651 |
| HincII | GTYRAC | 3 cut(s) | 439, 1192, 2209 |
| HindII | GTYRAC | 3 cut(s) | 439, 1192, 2209 |
| HindIII | AAGCTT | 1 cut(s) | 1865 |
| HinfI | GANTC | 9 cut(s) | 185, 635, 1133, 1328, 1788, 2200, 2210, 2348, 2501 |
| HpaI | GTTAAC | 1 cut(s) | 439 |
| HpaII | CCGG | 1 cut(s) | 1233 |
| HphI | GGTGA | 6 cut(s) | 1013, 1384, 1607, 1830, 2605, 2652 |
| Hpy166II | GTNNAC | 8 cut(s) | 439, 1192, 1347, 1472, 1827, 2209, 2432, 2596 |
| Hpy8I | GTNNAC | 8 cut(s) | 439, 1192, 1347, 1472, 1827, 2209, 2432, 2596 |
| Hpy99I | CGWCG | 3 cut(s) | 131, 1345, 2612 |
| HpyCH4III | ACNGT | 7 cut(s) | 443, 838, 928, 1155, 1831, 2073, 2300 |
| HpyCH4IV | ACGT | 2 cut(s) | 723, 1343 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 51, 304, 430, 822, 1426, 1637, 1709, 2048 |
| HpyF3I | CTNAG | 7 cut(s) | 300, 429, 639, 1368, 1872, 2045, 2100 |
| HpySE526I | ACGT | 2 cut(s) | 723, 1343 |
| HspAI | GCGC | 1 cut(s) | 2651 |
| KroI | GCCGGC | 1 cut(s) | 1232 |
| KroNI | GCCGGC | 1 cut(s) | 1234 |
| Ksp22I | TGATCA | 1 cut(s) | 1615 |
| KspAI | GTTAAC | 1 cut(s) | 439 |
| LguI | GCTCTTC | 1 cut(s) | 2310 |
| LmnI | GCTCC | 3 cut(s) | 169, 304, 421 |
| Lsp1109I | GCAGC | 7 cut(s) | 66, 69, 173, 930, 1643, 2194, 2640 |
| LweI | GCATC | 8 cut(s) | 382, 718, 931, 1071, 1460, 1588, 2301, 2454 |
| MaeI | CTAG | 7 cut(s) | 36, 774, 813, 909, 1455, 1467, 2666 |
| MaeII | ACGT | 2 cut(s) | 723, 1343 |
| MaeIII | GTNAC | 3 cut(s) | 5, 1001, 1436 |
| MbiI | CCGCTC | 1 cut(s) | 699 |
| MfeI | CAATTG | 1 cut(s) | 1085 |
| MflI | RGATCY | 1 cut(s) | 1978 |
| MhlI | GDGCHC | 5 cut(s) | 558, 877, 1102, 1910, 2539 |
| MlsI | TGGCCA | 2 cut(s) | 1503, 1915 |
| MluNI | TGGCCA | 2 cut(s) | 1503, 1915 |
| MlyI | GAGTC | 5 cut(s) | 194, 1322, 1797, 2204, 2357 |
| MmeI | TCCRAC | 2 cut(s) | 1964, 2096 |
| Mox20I | TGGCCA | 2 cut(s) | 1503, 1915 |
| Mph1103I | ATGCAT | 2 cut(s) | 84, 2024 |
| MroNI | GCCGGC | 1 cut(s) | 1232 |
| MroXI | GAANNNNTTC | 2 cut(s) | 588, 1702 |
| MscI | TGGCCA | 2 cut(s) | 1503, 1915 |
| MseI | TTAA | 6 cut(s) | 15, 438, 1305, 1395, 2075, 2604 |
| MslI | CAYNNNNRTG | 2 cut(s) | 657, 939 |
| Msp20I | TGGCCA | 2 cut(s) | 1503, 1915 |
| MspI | CCGG | 1 cut(s) | 1233 |
| MspR9I | CCNGG | 4 cut(s) | 594, 901, 1270, 2514 |
| MunI | CAATTG | 1 cut(s) | 1085 |
| Mva1269I | GAATGC | 3 cut(s) | 1672, 1815, 2024 |
| MvaI | CCWGG | 4 cut(s) | 594, 901, 1270, 2514 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 51, 304, 430, 822, 1426, 1637, 1709, 2048 |
| NaeI | GCCGGC | 1 cut(s) | 1234 |
| NcoI | CCATGG | 1 cut(s) | 150 |
| NdeI | CATATG | 1 cut(s) | 1751 |
| NgoMIV | GCCGGC | 1 cut(s) | 1232 |
| NlaIV | GGNNCC | 2 cut(s) | 906, 2538 |
| NmuCI | GTSAC | 3 cut(s) | 5, 1001, 1436 |
| NsiI | ATGCAT | 2 cut(s) | 84, 2024 |
| NspI | RCATGY | 5 cut(s) | 45, 531, 571, 1613, 2095 |
| PaeI | GCATGC | 2 cut(s) | 571, 1613 |
| PagI | TCATGA | 2 cut(s) | 1486, 1549 |
| PaqCI | CACCTGC | 1 cut(s) | 525 |
| PasI | CCCWGGG | 1 cut(s) | 900 |
| PceI | AGGCCT | 1 cut(s) | 1687 |
| PciI | ACATGT | 1 cut(s) | 527 |
| PciSI | GCTCTTC | 1 cut(s) | 2310 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1337 |
| PctI | GAATGC | 3 cut(s) | 1672, 1815, 2024 |
| PdiI | GCCGGC | 1 cut(s) | 1234 |
| PdmI | GAANNNNTTC | 2 cut(s) | 588, 1702 |
| PfeI | GAWTC | 4 cut(s) | 635, 1133, 2200, 2501 |
| Pfl23II | CGTACG | 1 cut(s) | 1927 |
| PfoI | TCCNGGA | 1 cut(s) | 592 |
| PkrI | GCNGC | 8 cut(s) | 56, 59, 115, 163, 920, 1633, 2184, 2655 |
| PleI | GAGTC | 5 cut(s) | 193, 1322, 1796, 2204, 2356 |
| PpsI | GAGTC | 5 cut(s) | 193, 1322, 1796, 2204, 2356 |
| PpuMI | RGGWCCY | 1 cut(s) | 830 |
| PscI | ACATGT | 1 cut(s) | 527 |
| Psp5II | RGGWCCY | 1 cut(s) | 830 |
| Psp6I | CCWGG | 4 cut(s) | 592, 899, 1268, 2512 |
| PspEI | GGTNACC | 1 cut(s) | 1001 |
| PspGI | CCWGG | 4 cut(s) | 592, 899, 1268, 2512 |
| PspLI | CGTACG | 1 cut(s) | 1927 |
| PspN4I | GGNNCC | 2 cut(s) | 906, 2538 |
| PspPI | GGNCC | 1 cut(s) | 830 |
| PspPPI | RGGWCCY | 1 cut(s) | 830 |
| PstI | CTGCAG | 1 cut(s) | 920 |
| PstNI | CAGNNNCTG | 1 cut(s) | 851 |
| PsuI | RGATCY | 1 cut(s) | 1978 |
| RsaI | GTAC | 7 cut(s) | 930, 1037, 1316, 1860, 1929, 2476, 2678 |
| RsaNI | GTAC | 7 cut(s) | 929, 1036, 1315, 1859, 1928, 2475, 2677 |
| RseI | CAYNNNNRTG | 2 cut(s) | 657, 939 |
| SalI | GTCGAC | 1 cut(s) | 1190 |
| SapI | GCTCTTC | 1 cut(s) | 2310 |
| SaqAI | TTAA | 6 cut(s) | 15, 438, 1305, 1395, 2075, 2604 |
| SatI | GCNGC | 8 cut(s) | 55, 58, 114, 162, 919, 1632, 2183, 2654 |
| Sau96I | GGNCC | 1 cut(s) | 830 |
| ScaI | AGTACT | 1 cut(s) | 2678 |
| SchI | GAGTC | 5 cut(s) | 194, 1322, 1797, 2204, 2357 |
| ScrFI | CCNGG | 4 cut(s) | 594, 901, 1270, 2514 |
| SduI | GDGCHC | 5 cut(s) | 558, 877, 1102, 1910, 2539 |
| SfaNI | GCATC | 8 cut(s) | 382, 718, 931, 1071, 1460, 1588, 2301, 2454 |
| SfcI | CTRYAG | 5 cut(s) | 117, 834, 916, 1990, 2481 |
| SinI | GGWCC | 1 cut(s) | 830 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 657, 939 |
| SmlI | CTYRAG | 7 cut(s) | 174, 1322, 1558, 1903, 1982, 2327, 2505 |
| SmoI | CTYRAG | 7 cut(s) | 174, 1322, 1558, 1903, 1982, 2327, 2505 |
| SpeI | ACTAGT | 1 cut(s) | 1466 |
| SphI | GCATGC | 2 cut(s) | 571, 1613 |
| SseBI | AGGCCT | 1 cut(s) | 1687 |
| SsiI | CCGC | 2 cut(s) | 113, 699 |
| SspI | AATATT | 2 cut(s) | 1954, 2079 |
| SspMI | CTAG | 7 cut(s) | 36, 774, 813, 909, 1455, 1467, 2666 |
| StuI | AGGCCT | 1 cut(s) | 1687 |
| StyD4I | CCNGG | 4 cut(s) | 592, 899, 1268, 2512 |
| StyI | CCWWGG | 2 cut(s) | 150, 1792 |
| TaaI | ACNGT | 7 cut(s) | 443, 838, 928, 1155, 1831, 2073, 2300 |
| TaiI | ACGT | 2 cut(s) | 726, 1346 |
| TaqI | TCGA | 8 cut(s) | 1013, 1072, 1191, 1331, 1340, 1514, 2295, 2572 |
| TaqII | GACCGA | 2 cut(s) | 140, 1020 |
| TatI | WGTACW | 2 cut(s) | 928, 2676 |
| TauI | GCSGC | 1 cut(s) | 116 |
| TfiI | GAWTC | 4 cut(s) | 635, 1133, 2200, 2501 |
| Tru1I | TTAA | 6 cut(s) | 15, 438, 1305, 1395, 2075, 2604 |
| Tru9I | TTAA | 6 cut(s) | 15, 438, 1305, 1395, 2075, 2604 |
| TscAI | CASTG | 2 cut(s) | 99, 2305 |
| TseFI | GTSAC | 3 cut(s) | 5, 1001, 1436 |
| TseI | GCWGC | 7 cut(s) | 54, 57, 161, 918, 1631, 2182, 2653 |
| Tsp45I | GTSAC | 3 cut(s) | 5, 1001, 1436 |
| TspDTI | ATGAA | 7 cut(s) | 231, 773, 1176, 1395, 1566, 2328, 2634 |
| TspGWI | ACGGA | 2 cut(s) | 1001, 2474 |
| TspRI | CASTG | 2 cut(s) | 99, 2305 |
| VpaK11BI | GGWCC | 1 cut(s) | 830 |
| XapI | RAATTY | 6 cut(s) | 11, 190, 226, 237, 1067, 1184 |
| XceI | RCATGY | 5 cut(s) | 45, 531, 571, 1613, 2095 |
| XmiI | GTMKAC | 2 cut(s) | 1191, 1826 |
| XmnI | GAANNNNTTC | 2 cut(s) | 588, 1702 |
| XspI | CTAG | 7 cut(s) | 36, 774, 813, 909, 1455, 1467, 2666 |
| ZrmI | AGTACT | 1 cut(s) | 2678 |
| Zsp2I | ATGCAT | 2 cut(s) | 84, 2024 |