Prupe.5G051100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
5484131 .. 5489377
5247 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G051100.1

Sequence Viewer

Length: 186 bp
ATGAAAATGGAGAAATCCTTCACTCTGGTTCAGACAGTTGTCACTGCAACAGTCTTCTCTGCGGTTTCCGGCTGGTACGGGTTCATGTTCGGGAGGGAATCTGCTCGGAAAGAGCTCGGCAGCTTGATCGACGATCTTCGCCGTCAAAATCCCAACTCCGATCCACCACCACCACCTCATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.8

Weight (kDa)

8.21

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 62
AclWI GGATC 1 cut(s) 155
AfaI GTAC 1 cut(s) 77
AluBI AGCT 2 cut(s) 115, 123
AluI AGCT 2 cut(s) 115, 123
Alw21I GWGCWC 1 cut(s) 117
AlwI GGATC 1 cut(s) 155
ApeKI GCWGC 1 cut(s) 120
Asp700I GAANNNNTTC 1 cut(s) 17
BanII GRGCYC 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 46
Bbv12I GWGCWC 1 cut(s) 117
BbvI GCAGC 1 cut(s) 132
BceAI ACGGC 1 cut(s) 126
BcgI CGANNNNNNTGC 2 cut(s) 109, 143
BisI GCNGC 1 cut(s) 121
BlsI GCNGC 1 cut(s) 122
BoxI GACNNNNGTC 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 46
BseXI GCAGC 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 117
BsiSI CCGG 1 cut(s) 69
Bsp1286I GDGCHC 1 cut(s) 117
Bsp143I GATC 3 cut(s) 126, 133, 160
BspACI CCGC 1 cut(s) 62
BspPI GGATC 1 cut(s) 155
BssMI GATC 3 cut(s) 126, 133, 160
Bst4CI ACNGT 2 cut(s) 37, 52
BstKTI GATC 3 cut(s) 129, 136, 163
BstMBI GATC 3 cut(s) 126, 133, 160
BstPAI GACNNNNGTC 1 cut(s) 38
BstV1I GCAGC 1 cut(s) 132
BstV2I GAAGAC 1 cut(s) 46
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 1 cut(s) 42
Csp6I GTAC 1 cut(s) 76
CviAII CATG 2 cut(s) 85, 179
CviJI RGCY 3 cut(s) 72, 115, 123
CviKI_1 RGCY 3 cut(s) 72, 115, 123
CviQI GTAC 1 cut(s) 76
DpnI GATC 3 cut(s) 128, 135, 162
DpnII GATC 3 cut(s) 126, 133, 160
Ecl136II GAGCTC 1 cut(s) 115
Eco24I GRGCYC 1 cut(s) 117
Eco53kI GAGCTC 1 cut(s) 115
EcoICRI GAGCTC 1 cut(s) 115
EcoT38I GRGCYC 1 cut(s) 117
FaeI CATG 2 cut(s) 88, 182
FaiI YATR 2 cut(s) 86, 180
FatI CATG 2 cut(s) 84, 178
Fnu4HI GCNGC 1 cut(s) 121
FriOI GRGCYC 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 121
GluI GCNGC 1 cut(s) 121
HapII CCGG 1 cut(s) 69
Hin1II CATG 2 cut(s) 88, 182
HinfI GANTC 1 cut(s) 98
HpaII CCGG 1 cut(s) 69
Hpy188I TCNGA 3 cut(s) 33, 108, 160
Hpy188III TCNNGA 1 cut(s) 91
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 1 cut(s) 28
HpyCH4III ACNGT 2 cut(s) 37, 52
HpyCH4V TGCA 1 cut(s) 47
Hsp92II CATG 2 cut(s) 88, 182
Kzo9I GATC 3 cut(s) 126, 133, 160
LpnPI CCDG 3 cut(s) 11, 58, 82
Lsp1109I GCAGC 1 cut(s) 132
MaeIII GTNAC 1 cut(s) 40
MalI GATC 3 cut(s) 128, 135, 162
MboI GATC 3 cut(s) 126, 133, 160
MboII GAAGA 2 cut(s) 46, 128
MhlI GDGCHC 1 cut(s) 117
MnlI CCTC 2 cut(s) 87, 186
MroXI GAANNNNTTC 1 cut(s) 17
MspI CCGG 1 cut(s) 69
NdeII GATC 3 cut(s) 126, 133, 160
NlaIII CATG 2 cut(s) 88, 182
NmeAIII GCCGAG 1 cut(s) 96
NmuCI GTSAC 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 1 cut(s) 98
PkrI GCNGC 1 cut(s) 122
PshAI GACNNNNGTC 1 cut(s) 38
Psp124BI GAGCTC 1 cut(s) 117
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SacI GAGCTC 1 cut(s) 117
SatI GCNGC 1 cut(s) 121
Sau3AI GATC 3 cut(s) 126, 133, 160
SduI GDGCHC 1 cut(s) 117
SetI ASST 3 cut(s) 117, 125, 178
SgeI CNNG 9 cut(s) 38, 81, 85, 91, 97, 103, 117, 128, 136
SsiI CCGC 1 cut(s) 62
SstI GAGCTC 1 cut(s) 117
TaaI ACNGT 2 cut(s) 37, 52
TaqI TCGA 1 cut(s) 129
TfiI GAWTC 1 cut(s) 98
TscAI CASTG 1 cut(s) 49
TseFI GTSAC 1 cut(s) 40
TseI GCWGC 1 cut(s) 120
Tsp45I GTSAC 1 cut(s) 40
TspDTI ATGAA 2 cut(s) 17, 73
TspRI CASTG 1 cut(s) 49
XmnI GAANNNNTTC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.