RchiOBHm_Chr7g0205921

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
23628420 .. 23633112
4693 bp
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UTR
Exon/CDS
Intron
PRQ18426

Sequence Viewer

Length: 192 bp
ATGAAAATGGAGAAAGCTTTCACTCTGGTTCAGACAGTTGCAGTGGCACCAGTCTTCTCTGCCGTTTCCTGCTGGTACTTACTTTCTCTCACTTCCCGGAATTCCATTCTTTTCAGGTTTGGAAGAGAATCTGCTCGCAAAGAGCTCGGAAGCTTAATCCAAGACCTTCGCCGCCAGAATCCCAATTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.16

Weight (kDa)

10.41

Isoelectric Point (pI)

59.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 46
AciI CCGC 1 cut(s) 172
AcsI RAATTY 1 cut(s) 100
AfaI GTAC 1 cut(s) 77
AluBI AGCT 3 cut(s) 17, 145, 153
AluI AGCT 3 cut(s) 17, 145, 153
Alw21I GWGCWC 1 cut(s) 147
ApoI RAATTY 1 cut(s) 100
Asp700I GAANNNNTTC 1 cut(s) 17
AsuC2I CCSGG 1 cut(s) 97
BanI GGYRCC 1 cut(s) 46
BanII GRGCYC 1 cut(s) 147
BbsI GAAGAC 1 cut(s) 46
Bbv12I GWGCWC 1 cut(s) 147
BceAI ACGGC 1 cut(s) 47
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BcnI CCSGG 1 cut(s) 97
BisI GCNGC 1 cut(s) 172
BlsI GCNGC 1 cut(s) 173
Bme1390I CCNGG 1 cut(s) 97
BmiI GGNNCC 1 cut(s) 48
BmrFI CCNGG 1 cut(s) 97
BpiI GAAGAC 1 cut(s) 46
BpuMI CCSGG 1 cut(s) 97
Bse1I ACTGG 1 cut(s) 50
BseNI ACTGG 1 cut(s) 50
BshNI GGYRCC 1 cut(s) 46
BsiHKAI GWGCWC 1 cut(s) 147
BsiSI CCGG 1 cut(s) 97
Bsp1286I GDGCHC 1 cut(s) 147
BspACI CCGC 1 cut(s) 172
BspLI GGNNCC 1 cut(s) 48
BspT107I GGYRCC 1 cut(s) 46
BsrI ACTGG 1 cut(s) 50
Bst4CI ACNGT 1 cut(s) 37
Bst6I CTCTTC 1 cut(s) 118
BstC8I GCNNGC 1 cut(s) 136
BstSCI CCNGG 1 cut(s) 95
BstV2I GAAGAC 1 cut(s) 46
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 136
Csp6I GTAC 1 cut(s) 76
CviJI RGCY 3 cut(s) 17, 145, 153
CviKI_1 RGCY 3 cut(s) 17, 145, 153
CviQI GTAC 1 cut(s) 76
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Ecl136II GAGCTC 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 147
Eco53kI GAGCTC 1 cut(s) 145
EcoICRI GAGCTC 1 cut(s) 145
EcoRI GAATTC 1 cut(s) 100
EcoT38I GRGCYC 1 cut(s) 147
Fnu4HI GCNGC 1 cut(s) 172
FriOI GRGCYC 1 cut(s) 147
Fsp4HI GCNGC 1 cut(s) 172
GluI GCNGC 1 cut(s) 172
HapII CCGG 1 cut(s) 97
HindIII AAGCTT 2 cut(s) 15, 151
HinfI GANTC 2 cut(s) 128, 178
HpaII CCGG 1 cut(s) 97
Hpy188I TCNGA 2 cut(s) 33, 149
Hpy188III TCNNGA 1 cut(s) 189
HpyAV CCTTC 1 cut(s) 176
HpyCH4III ACNGT 1 cut(s) 37
HpyCH4V TGCA 1 cut(s) 41
LpnPI CCDG 7 cut(s) 11, 58, 63, 82, 100, 110, 188
MboII GAAGA 2 cut(s) 46, 135
MhlI GDGCHC 1 cut(s) 147
MluCI AATT 2 cut(s) 100, 184
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 1 cut(s) 155
MspI CCGG 1 cut(s) 97
MspR9I CCNGG 1 cut(s) 97
NciI CCSGG 1 cut(s) 97
NlaIV GGNNCC 1 cut(s) 48
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 128, 178
PfoI TCCNGGA 1 cut(s) 95
PkrI GCNGC 1 cut(s) 173
Psp124BI GAGCTC 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 48
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SacI GAGCTC 1 cut(s) 147
SaqAI TTAA 1 cut(s) 155
SatI GCNGC 1 cut(s) 172
ScrFI CCNGG 1 cut(s) 97
SduI GDGCHC 1 cut(s) 147
SetI ASST 5 cut(s) 19, 119, 147, 155, 168
Sse9I AATT 2 cut(s) 100, 184
SsiI CCGC 1 cut(s) 172
SstI GAGCTC 1 cut(s) 147
StyD4I CCNGG 1 cut(s) 95
TaaI ACNGT 1 cut(s) 37
TasI AATT 2 cut(s) 100, 184
TauI GCSGC 1 cut(s) 174
TfiI GAWTC 2 cut(s) 128, 178
Tru1I TTAA 1 cut(s) 155
Tru9I TTAA 1 cut(s) 155
TscAI CASTG 1 cut(s) 48
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 48
XapI RAATTY 1 cut(s) 100
XmnI GAANNNNTTC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.