Prupe.5G059000_v2.0.a1

glycerol-3-phosphate transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
6366402 .. 6370602
4201 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G059000.1

Sequence Viewer

Length: 1620 bp
ATGTCTCATAGTTCTGATACAAGGAGAGAAATCCCACCTGGAATTTTGCTTATTAGAAGCATTAGAGGCAAAGATTGGAGTCTTTCTACATATAGATATGTGATTTTGCTTGTTACTTTCATAGCTTATGCATGCTACCATGCTTCAAGAAAACCCAGTAGTATAGTGAAAAGTGTTTTGTATCCTGACCCCAACAAAGGCACAGGCTTAGGCTTGGACCCCTTGTTTGGCAGGGTTTTTGTTAAGGAAGAGTTTGGAGGTAATGGGAATTATAGGTTGATAGAGAAGGGTTGGGCTCCATTTAATGGAACTGACGGGACGTCGAAGTTGGGAGAGATTGATCTTGCATTTCTTGCATGTTACTCTTTGGGAATGTATGCTGCTGGGCATTTGGGAGATACATTGGACCTCCGGTTGTTCTTGACAGCCGGGATGATTGGGAGTGGCATTTTTGTTGCACTATTTGGGATGGGATACTTTTGGAATGTTCATGTGTTTGGTTTTTATCTTGGGATGCAAATGGTTGCGGGGTTATTCCAAGCAACTGGCTGGCCTTCGGTTGTTGCTGTGATTGGTAATTGGTTTGGAAAGGGGAAGAGGGGTTTGATAATGGGTATATGGAATGCACACACTTCCATTGGGAATATTAGTGGCTCACTTCTTGCTGCTAGTGTTCTGGACTATGGGTGGGGTTGGTGTTTTATAGTTCCAGGTGCTTTTATTGCAGTGGGCGGTGTAATGGTTTTCTTCTTCTTGGCTCCATATCCAGAGGACATTGGATTTTCTTTCCCACAAGGTTCACCTTCTGATTTGGAGGCAAACCCTAAGGACGAAGAAGCTAATGTAAGAAAAGAAACTACAGAGGAAGATGAAACACAAACTATTAACCGAGCTGGGTCTGTGAGCAGGACAAGTGTTGGGCTTCTTGAAGCTTGTCTAATACCAGGAGTTATACCCTTTGCGCTGTGCCTCTTCTTCTCAAAGCTTGTGGCCTACACGTTTCTGTACTGGCTGCCATTTTATTTAAGTCAGACTGAAATAGGAGGAGAATATGTTTCTGTAAAATCTGCTGGAAACCTCTCCACTTTGTTCGATGTAGGGGGCATAGTTGGTGGAATCCTTGCTGGCTACATATCTGATAAACTTAATGCTCGAGCTACCACAGCAGCCAGCTTCATGTGTGCTGCAATTCCAGCAATGCTTTTATATCGCAGATATGGCAGTATTTCACACAATATCAACATTGCGCTTATGATGGTTGCTGGCTTGTTTATTAATGGGCCCTATGCACTTATCACCACTGCGGTATCTGCAGACCTTGGTACGCATAGTTCGCTTAGAGGGGATTCTCGAGCACTAGCAACAGTTACTGCCATAATTGATGGTACCGGATCAGTTGGTGCAGCTTTTGGCCCTCTTCTTACTGGTTTCCTTTCAACAAAGGGATGGGATGCAGTATTTGTGATGTTAATGATTTGTGCTCTTATTGCGGCACTTCTTTTATCACGTTTGGTTATGGCTGAAATTGCTGAGAAGACTTGCAAACAAGTTCCTGTATCCGGTGGGCGACAAAGTTCCAGAGCTCCTGCATCCCAACCACTTCTAAGTGATCGACGATGA

Protein Analysis

540

Amino Acids

57.77

Weight (kDa)

8.02

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 323
Acc65I GGTACC 1 cut(s) 1385
AccB1I GGYRCC 1 cut(s) 1385
AccB7I CCANNNNNTGG 1 cut(s) 305
AciI CCGC 4 cut(s) 527, 732, 1304, 1490
AclWI GGATC 1 cut(s) 1399
AcsI RAATTY 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 320
AfaI GTAC 3 cut(s) 1007, 1324, 1387
AfiI CCNNNNNNNGG 4 cut(s) 197, 227, 305, 1559
AflIII ACRYGT 1 cut(s) 996
AgsI TTSAA 3 cut(s) 147, 929, 1437
AhdI GACNNNNNGTC 1 cut(s) 319
AjnI CCWGG 3 cut(s) 37, 709, 943
AluBI AGCT 9 cut(s) 125, 839, 893, 932, 985, 1157, 1173, 1406, 1583
AluI AGCT 9 cut(s) 125, 839, 893, 932, 985, 1157, 1173, 1406, 1583
Alw21I GWGCWC 3 cut(s) 1357, 1483, 1585
Alw26I GTCTC 1 cut(s) 9
AlwI GGATC 1 cut(s) 1399
AlwNI CAGNNNCTG 1 cut(s) 1370
Ama87I CYCGRG 2 cut(s) 1152, 1350
AoxI GGCC 4 cut(s) 551, 990, 1280, 1411
ApaI GGGCCC 1 cut(s) 1284
ApeKI GCWGC 6 cut(s) 380, 665, 1012, 1166, 1184, 1403
ApoI RAATTY 1 cut(s) 42
ArsI GACNNNNNNTTYG 2 cut(s) 209, 241
AseI ATTAAT 1 cut(s) 1275
Asp718I GGTACC 1 cut(s) 1385
AspLEI GCGC 2 cut(s) 964, 1249
AspS9I GGNCC 5 cut(s) 217, 406, 1280, 1281, 1412
AsuC2I CCSGG 1 cut(s) 430
AsuHPI GGTGA 2 cut(s) 792, 1288
AvaI CYCGRG 2 cut(s) 1152, 1350
AvaII GGWCC 2 cut(s) 217, 406
AxyI CCTNAGG 1 cut(s) 825
BaeGI GKGCMC 1 cut(s) 1284
BaeI ACNNNNGTAYC 2 cut(s) 1290, 1323
BanI GGYRCC 1 cut(s) 1385
BanII GRGCYC 3 cut(s) 298, 1284, 1585
BbsI GAAGAC 1 cut(s) 1541
Bbv12I GWGCWC 3 cut(s) 1357, 1483, 1585
BbvI GCAGC 6 cut(s) 367, 652, 999, 1171, 1178, 1415
BccI CCATC 4 cut(s) 463, 1249, 1376, 1440
BciT130I CCWGG 3 cut(s) 39, 711, 945
BciVI GTATCC 3 cut(s) 192, 467, 1567
BcnI CCSGG 1 cut(s) 430
BcoDI GTCTC 1 cut(s) 9
BfaI CTAG 2 cut(s) 669, 1358
BfmI CTRYAG 2 cut(s) 858, 1311
BfuI GTATCC 3 cut(s) 192, 467, 1567
BisI GCNGC 7 cut(s) 381, 666, 1013, 1167, 1185, 1404, 1491
BlsI GCNGC 7 cut(s) 382, 667, 1014, 1168, 1186, 1405, 1492
Bme1390I CCNGG 4 cut(s) 39, 430, 711, 945
Bme18I GGWCC 2 cut(s) 217, 406
BmeRI GACNNNNNGTC 1 cut(s) 319
BmeT110I CYCGRG 2 cut(s) 1152, 1350
BmgT120I GGNCC 5 cut(s) 217, 406, 1280, 1281, 1412
BmiI GGNNCC 5 cut(s) 219, 297, 759, 1282, 1387
BmrFI CCNGG 4 cut(s) 39, 430, 711, 945
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 3 cut(s) 504, 1441, 1598
BmuI ACTGGG 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 1541
Bpu10I CCTNAGC 1 cut(s) 208
BpuMI CCSGG 1 cut(s) 430
BsaHI GRCGYC 1 cut(s) 320
BsaJI CCNNGG 1 cut(s) 1318
BsaWI WCCGGW 3 cut(s) 411, 1388, 1559
BsaXI ACNNNNNCTCC 2 cut(s) 1038, 1068
Bsc4I CCNNNNNNNGG 4 cut(s) 197, 227, 305, 1559
Bse1I ACTGG 4 cut(s) 156, 550, 1013, 1429
Bse21I CCTNAGG 1 cut(s) 825
Bse3DI GCAATG 2 cut(s) 1203, 1242
BseBI CCWGG 3 cut(s) 39, 711, 945
BseDI CCNNGG 1 cut(s) 1318
BseGI GGATG 6 cut(s) 438, 474, 519, 1451, 1456, 1589
BseLI CCNNNNNNNGG 4 cut(s) 197, 227, 305, 1559
BseMI GCAATG 2 cut(s) 1203, 1242
BseMII CTCAG 1 cut(s) 1521
BseNI ACTGG 4 cut(s) 156, 550, 1013, 1429
BseRI GAGGAG 1 cut(s) 1059
BseSI GKGCMC 1 cut(s) 1284
BseXI GCAGC 6 cut(s) 367, 652, 999, 1171, 1178, 1415
BseYI CCCAGC 2 cut(s) 383, 893
BsgI GTGCAG 1 cut(s) 1422
BshFI GGCC 4 cut(s) 553, 992, 1282, 1413
BshNI GGYRCC 1 cut(s) 1385
BsiHKAI GWGCWC 3 cut(s) 1357, 1483, 1585
BsiHKCI CYCGRG 2 cut(s) 1152, 1350
BsiSI CCGG 4 cut(s) 412, 429, 1389, 1560
BslFI GGGAC 1 cut(s) 331
BslI CCNNNNNNNGG 4 cut(s) 197, 227, 305, 1559
BsmAI GTCTC 1 cut(s) 9
BsmFI GGGAC 1 cut(s) 331
BsmI GAATGC 1 cut(s) 628
BsnI GGCC 4 cut(s) 553, 992, 1282, 1413
BsoBI CYCGRG 2 cut(s) 1152, 1350
Bsp120I GGGCCC 1 cut(s) 1280
Bsp1286I GDGCHC 5 cut(s) 298, 1284, 1357, 1483, 1585
Bsp143I GATC 3 cut(s) 340, 1391, 1609
BspACI CCGC 4 cut(s) 527, 732, 1304, 1490
BspANI GGCC 4 cut(s) 553, 992, 1282, 1413
BspCNI CTCAG 1 cut(s) 1522
BspLI GGNNCC 5 cut(s) 219, 297, 759, 1282, 1387
BspMAI CTGCAG 1 cut(s) 1315
BspPI GGATC 1 cut(s) 1399
BspT107I GGYRCC 1 cut(s) 1385
BsrDI GCAATG 2 cut(s) 1203, 1242
BsrI ACTGG 4 cut(s) 156, 550, 1013, 1429
BssECI CCNNGG 1 cut(s) 1318
BssMI GATC 3 cut(s) 340, 1391, 1609
BssNI GRCGYC 1 cut(s) 320
BssT1I CCWWGG 1 cut(s) 1318
Bst2UI CCWGG 3 cut(s) 39, 711, 945
Bst4CI ACNGT 1 cut(s) 1366
Bst6I CTCTTC 4 cut(s) 243, 590, 977, 1422
BstACI GRCGYC 1 cut(s) 320
BstAPI GCANNNNNTGC 1 cut(s) 353
BstC8I GCNNGC 5 cut(s) 133, 551, 1126, 1171, 1264
BstDEI CTNAG 5 cut(s) 208, 825, 1337, 1530, 1604
BstF5I GGATG 6 cut(s) 438, 474, 519, 1451, 1456, 1589
BstHHI GCGC 2 cut(s) 964, 1249
BstKTI GATC 3 cut(s) 343, 1394, 1612
BstMAI GTCTC 1 cut(s) 9
BstMBI GATC 3 cut(s) 340, 1391, 1609
BstNI CCWGG 3 cut(s) 39, 711, 945
BstNSI RCATGY 2 cut(s) 135, 360
BstSCI CCNGG 4 cut(s) 37, 428, 709, 943
BstSFI CTRYAG 2 cut(s) 858, 1311
BstSLI GKGCMC 1 cut(s) 1284
BstV1I GCAGC 6 cut(s) 367, 652, 999, 1171, 1178, 1415
BstV2I GAAGAC 1 cut(s) 1541
BstXI CCANNNNNNTGG 1 cut(s) 545
Bsu36I CCTNAGG 1 cut(s) 825
BsuI GTATCC 3 cut(s) 192, 467, 1567
BsuRI GGCC 4 cut(s) 553, 992, 1282, 1413
BtsCI GGATG 6 cut(s) 438, 474, 519, 1451, 1456, 1589
BtsI GCAGTG 2 cut(s) 732, 1299
BtsIMutI CAGTG 2 cut(s) 732, 1299
Cac8I GCNNGC 5 cut(s) 133, 551, 1126, 1171, 1264
CaiI CAGNNNCTG 1 cut(s) 1370
CfoI GCGC 2 cut(s) 964, 1249
Cfr13I GGNCC 5 cut(s) 217, 406, 1280, 1281, 1412
Csp6I GTAC 3 cut(s) 1006, 1323, 1386
CspCI CAANNNNNGTGG 2 cut(s) 969, 1004
CviAII CATG 5 cut(s) 132, 140, 357, 491, 1177
CviQI GTAC 3 cut(s) 1006, 1323, 1386
DdeI CTNAG 5 cut(s) 208, 825, 1337, 1530, 1604
DpnI GATC 3 cut(s) 342, 1393, 1611
DpnII GATC 3 cut(s) 340, 1391, 1609
DriI GACNNNNNGTC 1 cut(s) 319
Eam1104I CTCTTC 4 cut(s) 243, 590, 977, 1422
Eam1105I GACNNNNNGTC 1 cut(s) 319
EarI CTCTTC 4 cut(s) 243, 590, 977, 1422
Ecl136II GAGCTC 1 cut(s) 1583
Eco130I CCWWGG 1 cut(s) 1318
Eco24I GRGCYC 3 cut(s) 298, 1284, 1585
Eco47I GGWCC 2 cut(s) 217, 406
Eco53kI GAGCTC 1 cut(s) 1583
Eco81I CCTNAGG 1 cut(s) 825
Eco88I CYCGRG 2 cut(s) 1152, 1350
EcoICRI GAGCTC 1 cut(s) 1583
EcoO109I RGGNCCY 1 cut(s) 1281
EcoRII CCWGG 3 cut(s) 37, 709, 943
EcoT14I CCWWGG 1 cut(s) 1318
EcoT22I ATGCAT 1 cut(s) 133
EcoT38I GRGCYC 3 cut(s) 298, 1284, 1585
ErhI CCWWGG 1 cut(s) 1318
FaeI CATG 5 cut(s) 135, 143, 360, 494, 1180
FaqI GGGAC 1 cut(s) 331
FatI CATG 5 cut(s) 131, 139, 356, 490, 1176
FauI CCCGC 1 cut(s) 520
Fnu4HI GCNGC 7 cut(s) 381, 666, 1013, 1167, 1185, 1404, 1491
FokI GGATG 6 cut(s) 445, 481, 526, 1458, 1463, 1576
FriOI GRGCYC 3 cut(s) 298, 1284, 1585
Fsp4HI GCNGC 7 cut(s) 381, 666, 1013, 1167, 1185, 1404, 1491
FspBI CTAG 2 cut(s) 669, 1358
GlaI GCGC 2 cut(s) 963, 1248
GluI GCNGC 7 cut(s) 381, 666, 1013, 1167, 1185, 1404, 1491
GsaI CCCAGC 2 cut(s) 387, 897
HaeIII GGCC 4 cut(s) 553, 992, 1282, 1413
HapII CCGG 4 cut(s) 412, 429, 1389, 1560
HhaI GCGC 2 cut(s) 964, 1249
Hin1I GRCGYC 1 cut(s) 320
Hin1II CATG 5 cut(s) 135, 143, 360, 494, 1180
Hin6I GCGC 2 cut(s) 962, 1247
HinP1I GCGC 2 cut(s) 962, 1247
HindIII AAGCTT 2 cut(s) 930, 983
HinfI GANTC 3 cut(s) 79, 1116, 1346
HpaII CCGG 4 cut(s) 412, 429, 1389, 1560
HphI GGTGA 2 cut(s) 792, 1288
Hpy166II GTNNAC 1 cut(s) 800
Hpy188I TCNGA 4 cut(s) 16, 808, 1032, 1138
Hpy188III TCNNGA 8 cut(s) 147, 185, 421, 677, 767, 926, 1350, 1578
Hpy8I GTNNAC 1 cut(s) 800
Hpy99I CGWCG 2 cut(s) 325, 1617
HpyAV CCTTC 3 cut(s) 280, 564, 813
HpyCH4III ACNGT 1 cut(s) 1366
HpyCH4IV ACGT 3 cut(s) 320, 998, 1507
HpyF3I CTNAG 5 cut(s) 208, 825, 1337, 1530, 1604
HpySE526I ACGT 3 cut(s) 320, 998, 1507
Hsp92I GRCGYC 1 cut(s) 320
Hsp92II CATG 5 cut(s) 135, 143, 360, 494, 1180
HspAI GCGC 2 cut(s) 962, 1247
KpnI GGTACC 1 cut(s) 1389
Kzo9I GATC 3 cut(s) 340, 1391, 1609
LmnI GCTCC 3 cut(s) 301, 763, 1588
Lsp1109I GCAGC 6 cut(s) 367, 652, 999, 1171, 1178, 1415
LweI GCATC 3 cut(s) 504, 1441, 1598
MaeI CTAG 2 cut(s) 669, 1358
MaeII ACGT 3 cut(s) 320, 998, 1507
MaeIII GTNAC 3 cut(s) 112, 359, 1366
MalI GATC 3 cut(s) 342, 1393, 1611
MboI GATC 3 cut(s) 340, 1391, 1609
MhlI GDGCHC 5 cut(s) 298, 1284, 1357, 1483, 1585
MluCI AATT 6 cut(s) 42, 268, 577, 1188, 1377, 1524
MlyI GAGTC 1 cut(s) 88
Mph1103I ATGCAT 1 cut(s) 133
MseI TTAA 7 cut(s) 243, 303, 885, 1025, 1146, 1275, 1469
MspI CCGG 4 cut(s) 412, 429, 1389, 1560
MspR9I CCNGG 4 cut(s) 39, 430, 711, 945
Mva1269I GAATGC 1 cut(s) 628
MvaI CCWGG 3 cut(s) 39, 711, 945
NciI CCSGG 1 cut(s) 430
NdeII GATC 3 cut(s) 340, 1391, 1609
NlaIII CATG 5 cut(s) 135, 143, 360, 494, 1180
NlaIV GGNNCC 5 cut(s) 219, 297, 759, 1282, 1387
NsiI ATGCAT 1 cut(s) 133
NspI RCATGY 2 cut(s) 135, 360
PaeI GCATGC 1 cut(s) 135
PaeR7I CTCGAG 2 cut(s) 1152, 1350
PctI GAATGC 1 cut(s) 628
PfeI GAWTC 2 cut(s) 1116, 1346
PflMI CCANNNNNTGG 1 cut(s) 305
PkrI GCNGC 7 cut(s) 382, 667, 1014, 1168, 1186, 1405, 1492
PleI GAGTC 1 cut(s) 87
PpsI GAGTC 1 cut(s) 87
PshBI ATTAAT 1 cut(s) 1275
Psp124BI GAGCTC 1 cut(s) 1585
Psp6I CCWGG 3 cut(s) 37, 709, 943
PspFI CCCAGC 2 cut(s) 383, 893
PspGI CCWGG 3 cut(s) 37, 709, 943
PspN4I GGNNCC 5 cut(s) 219, 297, 759, 1282, 1387
PspOMI GGGCCC 1 cut(s) 1280
PspPI GGNCC 5 cut(s) 217, 406, 1280, 1281, 1412
PspXI VCTCGAGB 1 cut(s) 1152
PsrI GAACNNNNNNTAC 2 cut(s) 1315, 1347
PstI CTGCAG 1 cut(s) 1315
PstNI CAGNNNCTG 1 cut(s) 1370
RsaI GTAC 3 cut(s) 1007, 1324, 1387
RsaNI GTAC 3 cut(s) 1006, 1323, 1386
SacI GAGCTC 1 cut(s) 1585
SaqAI TTAA 7 cut(s) 243, 303, 885, 1025, 1146, 1275, 1469
SatI GCNGC 7 cut(s) 381, 666, 1013, 1167, 1185, 1404, 1491
Sau3AI GATC 3 cut(s) 340, 1391, 1609
Sau96I GGNCC 5 cut(s) 217, 406, 1280, 1281, 1412
SchI GAGTC 1 cut(s) 88
ScrFI CCNGG 4 cut(s) 39, 430, 711, 945
SduI GDGCHC 5 cut(s) 298, 1284, 1357, 1483, 1585
SfaNI GCATC 3 cut(s) 504, 1441, 1598
SfcI CTRYAG 2 cut(s) 858, 1311
Sfr274I CTCGAG 2 cut(s) 1152, 1350
SinI GGWCC 2 cut(s) 217, 406
SlaI CTCGAG 2 cut(s) 1152, 1350
SmlI CTYRAG 2 cut(s) 1152, 1350
SmoI CTYRAG 2 cut(s) 1152, 1350
SphI GCATGC 1 cut(s) 135
Sse9I AATT 6 cut(s) 42, 268, 577, 1188, 1377, 1524
SsiI CCGC 4 cut(s) 527, 732, 1304, 1490
SspI AATATT 1 cut(s) 646
SspMI CTAG 2 cut(s) 669, 1358
SstI GAGCTC 1 cut(s) 1585
StyD4I CCNGG 4 cut(s) 37, 428, 709, 943
StyI CCWWGG 1 cut(s) 1318
TaaI ACNGT 1 cut(s) 1366
TaiI ACGT 3 cut(s) 323, 1001, 1510
TaqI TCGA 5 cut(s) 323, 1092, 1153, 1351, 1612
TasI AATT 6 cut(s) 42, 268, 577, 1188, 1377, 1524
TatI WGTACW 1 cut(s) 1005
TauI GCSGC 1 cut(s) 1493
TfiI GAWTC 2 cut(s) 1116, 1346
Tru1I TTAA 7 cut(s) 243, 303, 885, 1025, 1146, 1275, 1469
Tru9I TTAA 7 cut(s) 243, 303, 885, 1025, 1146, 1275, 1469
TscAI CASTG 2 cut(s) 732, 1306
TseI GCWGC 6 cut(s) 380, 665, 1012, 1166, 1184, 1403
TspDTI ATGAA 4 cut(s) 109, 479, 885, 1165
TspRI CASTG 2 cut(s) 732, 1306
Van91I CCANNNNNTGG 1 cut(s) 305
VpaK11BI GGWCC 2 cut(s) 217, 406
VspI ATTAAT 1 cut(s) 1275
XapI RAATTY 1 cut(s) 42
XceI RCATGY 2 cut(s) 135, 360
XhoI CTCGAG 2 cut(s) 1152, 1350
XspI CTAG 2 cut(s) 669, 1358
ZraI GACGTC 1 cut(s) 321
Zsp2I ATGCAT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.