Rmu_sc0009349.1_g000013

glycerol-3-phosphate transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009349.1
Physical Location & Seq
Forward (+)
42967 .. 45730
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009349.1_g000013.1.cds

Sequence Viewer

Length: 1569 bp
atggatcgtgattttgatacagtgagaggaagcccacctgggattttgttgatcagaagcattagaggaaaagattggaggttttctacgtatagatatgtggttttgtttgttacgtttgtagcttatgctagttaccatgcttcaagaaaacccagtagtatagttaaaagtgttctgtatcctgagcccaccaacaaggacaatggcttggtcctcccctggcttggccagttttctattaagaagacagtgtccggggggaatgagagtcatcatcatcatcatcataggttgagagacaagggctgggctccttttaataccaaggacgggacgtccaagttgggtgagattgatgttgcatttctagcatgttactctctaggaatgtacgctgctgggcatttgggagataggctggacctccggctgttcttgacatgtgggatgattgggagtggcgttttcgttgcgctatttgggatggggtacttttggaacattcatgtgtttggattctatctggggatgcaaatggttgctggcttgttccaagcaacaggttggccttctgttgttgctgtgattggtaattggtttggaaagggaaagaggggtttgataatgggtatatggaatgcacatacgtcggttgggaatattagcggagtgctagttttcttgttcttgcctgcatatcctgaggatattggattttctagtccacatggttcagctgcgagtttggaggcagttcctaatgatgacgaagctaatatgggaaaaggaattggggtggaaagtgaaacaaatattccaagagctgggtctgtgagtaggacaggtgttggtcttcttgaagcttgtaccataccaggagttataccctttgcgttatgcctattctttgcaaagcttgtggcctacacatttctgtactggctaccattttatttaagtcagacagaaataggaggagagtatgtttctgtgaagtctgctggaaatctctccactttgtttgatgttgggggcatagttggcggaatccttgcaggctacatatccgataaacttaatgctcgagctactacagcagcctgcttcatgtatgctgcaattccagcaatgcttttgtatcgcagatatgggagtatttcacacaatatcaacattgtgcttatgatgattgctggactgtttattaatgggccctatgcacttatcacaactgcagtttctgcagaccttggcacgcacagttcacttagaggtgattctcgagcactggcaacagttactgccatcattgatggtactggatcggttggtgcagcttttggtcctcttctgactggtttcctttcaacaaagggatgggatgcagtatttgtgatgctaatggtctgtgcacttatagcggggcttcttttatcacgtctagttatctctgaaatttctgagaagacttgcaaaccgtctgtgtccagtgggcgacatagttttggaggtaatctttcttgtatgttccctttgtgttttcataggaaggaggtatgtgcataa

Protein Analysis

522

Amino Acids

56.17

Weight (kDa)

8.88

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 341
AccB7I CCANNNNNTGG 1 cut(s) 827
AciI CCGC 3 cut(s) 669, 1047, 1424
AclWI GGATC 2 cut(s) 12, 1333
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 1 cut(s) 1458
AcyI GRCGYC 1 cut(s) 338
AfaI GTAC 5 cut(s) 395, 494, 871, 941, 1321
AfiI CCNNNNNNNGG 3 cut(s) 227, 333, 827
AflIII ACRYGT 1 cut(s) 443
AgsI TTSAA 3 cut(s) 147, 863, 1371
AhdI GACNNNNNGTC 1 cut(s) 337
AjiI CACGTC 1 cut(s) 1442
AjnI CCWGG 3 cut(s) 37, 221, 877
AluBI AGCT 8 cut(s) 125, 740, 776, 827, 866, 919, 1091, 1340
AluI AGCT 8 cut(s) 125, 740, 776, 827, 866, 919, 1091, 1340
Alw21I GWGCWC 2 cut(s) 1291, 1417
Alw26I GTCTC 1 cut(s) 294
Alw44I GTGCAC 1 cut(s) 1413
AlwI GGATC 2 cut(s) 12, 1333
AlwNI CAGNNNCTG 2 cut(s) 1244, 1304
Ama87I CYCGRG 2 cut(s) 1086, 1284
AoxI GGCC 4 cut(s) 229, 569, 924, 1214
ApaI GGGCCC 1 cut(s) 1218
ApaLI GTGCAC 1 cut(s) 1413
ApeKI GCWGC 5 cut(s) 398, 740, 1100, 1118, 1337
ApoI RAATTY 1 cut(s) 1458
AseI ATTAAT 1 cut(s) 1209
AspLEI GCGC 1 cut(s) 478
AspS9I GGNCC 5 cut(s) 214, 424, 1214, 1215, 1346
AsuC2I CCSGG 1 cut(s) 259
AsuHPI GGTGA 2 cut(s) 362, 1289
AvaI CYCGRG 2 cut(s) 1086, 1284
AvaII GGWCC 3 cut(s) 214, 424, 1346
AxyI CCTNAGG 1 cut(s) 705
BaeGI GKGCMC 2 cut(s) 1218, 1417
BalI TGGCCA 1 cut(s) 231
BanII GRGCYC 3 cut(s) 192, 316, 1218
BbsI GAAGAC 3 cut(s) 254, 848, 1475
Bbv12I GWGCWC 2 cut(s) 1291, 1417
BbvI GCAGC 5 cut(s) 385, 727, 1105, 1112, 1349
BccI CCATC 4 cut(s) 481, 1310, 1316, 1374
BcgI CGANNNNNNTGC 2 cut(s) 633, 667
BciT130I CCWGG 3 cut(s) 39, 223, 879
BciVI GTATCC 1 cut(s) 192
BclI TGATCA 1 cut(s) 51
BcnI CCSGG 1 cut(s) 259
BcoDI GTCTC 1 cut(s) 294
BfaI CTAG 6 cut(s) 132, 371, 386, 677, 723, 1445
BfmI CTRYAG 3 cut(s) 1095, 1236, 1245
BfuI GTATCC 1 cut(s) 192
BisI GCNGC 5 cut(s) 399, 741, 1101, 1119, 1338
BlsI GCNGC 5 cut(s) 400, 742, 1102, 1120, 1339
Bme1390I CCNGG 4 cut(s) 39, 223, 259, 879
Bme18I GGWCC 3 cut(s) 214, 424, 1346
BmeRI GACNNNNNGTC 1 cut(s) 337
BmeT110I CYCGRG 2 cut(s) 1086, 1284
BmgBI CACGTC 1 cut(s) 1442
BmgT120I GGNCC 5 cut(s) 214, 424, 1214, 1215, 1346
BmiI GGNNCC 2 cut(s) 315, 1216
BmrFI CCNGG 4 cut(s) 39, 223, 259, 879
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 3 cut(s) 522, 1375, 1389
BmuI ACTGGG 1 cut(s) 150
BpiI GAAGAC 3 cut(s) 254, 848, 1475
Bpu10I CCTNAGC 1 cut(s) 186
BpuMI CCSGG 1 cut(s) 259
BsaAI YACGTR 1 cut(s) 90
BsaHI GRCGYC 1 cut(s) 338
BsaJI CCNNGG 5 cut(s) 38, 221, 258, 327, 1252
BsaXI ACNNNNNCTCC 4 cut(s) 663, 693, 972, 1002
Bsc4I CCNNNNNNNGG 3 cut(s) 227, 333, 827
Bse1I ACTGG 7 cut(s) 156, 232, 947, 1296, 1327, 1363, 1491
Bse21I CCTNAGG 1 cut(s) 705
Bse3DI GCAATG 1 cut(s) 1137
BseBI CCWGG 3 cut(s) 39, 223, 879
BseDI CCNNGG 5 cut(s) 38, 221, 258, 327, 1252
BseGI GGATG 5 cut(s) 456, 492, 537, 1385, 1390
BseLI CCNNNNNNNGG 3 cut(s) 227, 333, 827
BseMI GCAATG 1 cut(s) 1137
BseMII CTCAG 3 cut(s) 177, 696, 1455
BseNI ACTGG 7 cut(s) 156, 232, 947, 1296, 1327, 1363, 1491
BseRI GAGGAG 1 cut(s) 993
BseSI GKGCMC 2 cut(s) 1218, 1417
BseXI GCAGC 5 cut(s) 385, 727, 1105, 1112, 1349
BseYI CCCAGC 3 cut(s) 309, 401, 827
BsgI GTGCAG 1 cut(s) 1356
BshFI GGCC 4 cut(s) 231, 571, 926, 1216
BsiHKAI GWGCWC 2 cut(s) 1291, 1417
BsiHKCI CYCGRG 2 cut(s) 1086, 1284
BsiSI CCGG 2 cut(s) 258, 430
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 3 cut(s) 227, 333, 827
BsmAI GTCTC 1 cut(s) 294
BsmFI GGGAC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 646
BsnI GGCC 4 cut(s) 231, 571, 926, 1216
BsoBI CYCGRG 2 cut(s) 1086, 1284
Bsp120I GGGCCC 1 cut(s) 1214
Bsp1286I GDGCHC 5 cut(s) 192, 316, 1218, 1291, 1417
Bsp143I GATC 3 cut(s) 4, 51, 1325
BspACI CCGC 3 cut(s) 669, 1047, 1424
BspANI GGCC 4 cut(s) 231, 571, 926, 1216
BspCNI CTCAG 3 cut(s) 178, 697, 1456
BspLI GGNNCC 2 cut(s) 315, 1216
BspMAI CTGCAG 2 cut(s) 1240, 1249
BspPI GGATC 2 cut(s) 12, 1333
BsrDI GCAATG 1 cut(s) 1137
BsrI ACTGG 7 cut(s) 156, 232, 947, 1296, 1327, 1363, 1491
BssECI CCNNGG 5 cut(s) 38, 221, 258, 327, 1252
BssMI GATC 3 cut(s) 4, 51, 1325
BssNI GRCGYC 1 cut(s) 338
BssT1I CCWWGG 2 cut(s) 327, 1252
Bst2UI CCWGG 3 cut(s) 39, 223, 879
Bst4CI ACNGT 6 cut(s) 22, 253, 1203, 1265, 1300, 1482
Bst6I CTCTTC 1 cut(s) 1356
BstACI GRCGYC 1 cut(s) 338
BstAPI GCANNNNNTGC 1 cut(s) 1244
BstBAI YACGTR 1 cut(s) 90
BstC8I GCNNGC 5 cut(s) 547, 696, 1060, 1105, 1259
BstDEI CTNAG 4 cut(s) 186, 705, 1271, 1464
BstF5I GGATG 5 cut(s) 456, 492, 537, 1385, 1390
BstHHI GCGC 1 cut(s) 478
BstKTI GATC 3 cut(s) 7, 54, 1328
BstMAI GTCTC 1 cut(s) 294
BstMBI GATC 3 cut(s) 4, 51, 1325
BstMWI GCNNNNNNNGC 6 cut(s) 371, 1044, 1097, 1127, 1244, 1421
BstNI CCWGG 3 cut(s) 39, 223, 879
BstNSI RCATGY 2 cut(s) 378, 447
BstSCI CCNGG 4 cut(s) 37, 221, 257, 877
BstSFI CTRYAG 3 cut(s) 1095, 1236, 1245
BstSLI GKGCMC 2 cut(s) 1218, 1417
BstSNI TACGTA 1 cut(s) 90
BstV1I GCAGC 5 cut(s) 385, 727, 1105, 1112, 1349
BstV2I GAAGAC 3 cut(s) 254, 848, 1475
Bsu36I CCTNAGG 1 cut(s) 705
BsuI GTATCC 1 cut(s) 192
BsuRI GGCC 4 cut(s) 231, 571, 926, 1216
BtrI CACGTC 1 cut(s) 1442
BtsCI GGATG 5 cut(s) 456, 492, 537, 1385, 1390
BtsIMutI CAGTG 4 cut(s) 27, 258, 1289, 1498
Cac8I GCNNGC 5 cut(s) 547, 696, 1060, 1105, 1259
CaiI CAGNNNCTG 2 cut(s) 1244, 1304
CfoI GCGC 1 cut(s) 478
Cfr13I GGNCC 5 cut(s) 214, 424, 1214, 1215, 1346
Csp6I GTAC 5 cut(s) 394, 493, 870, 940, 1320
CspCI CAANNNNNGTGG 4 cut(s) 903, 938, 1006, 1041
CviAII CATG 6 cut(s) 140, 375, 444, 509, 731, 1111
CviQI GTAC 5 cut(s) 394, 493, 870, 940, 1320
DdeI CTNAG 4 cut(s) 186, 705, 1271, 1464
DpnI GATC 3 cut(s) 6, 53, 1327
DpnII GATC 3 cut(s) 4, 51, 1325
DriI GACNNNNNGTC 1 cut(s) 337
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 1356
Eam1105I GACNNNNNGTC 1 cut(s) 337
EarI CTCTTC 1 cut(s) 1356
EciI GGCGGA 1 cut(s) 1062
Eco105I TACGTA 1 cut(s) 90
Eco130I CCWWGG 2 cut(s) 327, 1252
Eco24I GRGCYC 3 cut(s) 192, 316, 1218
Eco47I GGWCC 3 cut(s) 214, 424, 1346
Eco81I CCTNAGG 1 cut(s) 705
Eco88I CYCGRG 2 cut(s) 1086, 1284
EcoO109I RGGNCCY 1 cut(s) 1215
EcoRII CCWGG 3 cut(s) 37, 221, 877
EcoT14I CCWWGG 2 cut(s) 327, 1252
EcoT38I GRGCYC 3 cut(s) 192, 316, 1218
ErhI CCWWGG 2 cut(s) 327, 1252
FaeI CATG 6 cut(s) 143, 378, 447, 512, 734, 1114
FaqI GGGAC 1 cut(s) 349
FatI CATG 6 cut(s) 139, 374, 443, 508, 730, 1110
FauI CCCGC 1 cut(s) 1417
FbaI TGATCA 1 cut(s) 51
Fnu4HI GCNGC 5 cut(s) 399, 741, 1101, 1119, 1338
FokI GGATG 5 cut(s) 463, 499, 544, 1392, 1397
FriOI GRGCYC 3 cut(s) 192, 316, 1218
Fsp4HI GCNGC 5 cut(s) 399, 741, 1101, 1119, 1338
FspBI CTAG 6 cut(s) 132, 371, 386, 677, 723, 1445
GlaI GCGC 1 cut(s) 477
GluI GCNGC 5 cut(s) 399, 741, 1101, 1119, 1338
GsaI CCCAGC 3 cut(s) 313, 405, 831
HaeIII GGCC 4 cut(s) 231, 571, 926, 1216
HapII CCGG 2 cut(s) 258, 430
HhaI GCGC 1 cut(s) 478
Hin1I GRCGYC 1 cut(s) 338
Hin1II CATG 6 cut(s) 143, 378, 447, 512, 734, 1114
Hin6I GCGC 1 cut(s) 476
HinP1I GCGC 1 cut(s) 476
HindIII AAGCTT 2 cut(s) 864, 917
HinfI GANTC 4 cut(s) 271, 519, 1050, 1280
HpaII CCGG 2 cut(s) 258, 430
HphI GGTGA 2 cut(s) 362, 1289
Hpy166II GTNNAC 3 cut(s) 728, 1268, 1415
Hpy188I TCNGA 6 cut(s) 56, 966, 1072, 1356, 1456, 1465
Hpy188III TCNNGA 7 cut(s) 8, 147, 185, 439, 704, 860, 1284
Hpy8I GTNNAC 3 cut(s) 728, 1268, 1415
Hpy99I CGWCG 1 cut(s) 655
HpyAV CCTTC 2 cut(s) 582, 1546
HpyCH4III ACNGT 6 cut(s) 22, 253, 1203, 1265, 1300, 1482
HpyCH4IV ACGT 5 cut(s) 89, 116, 338, 650, 1441
HpyF10VI GCNNNNNNNGC 6 cut(s) 371, 1044, 1097, 1127, 1244, 1421
HpyF3I CTNAG 4 cut(s) 186, 705, 1271, 1464
HpySE526I ACGT 5 cut(s) 89, 116, 338, 650, 1441
Hsp92I GRCGYC 1 cut(s) 338
Hsp92II CATG 6 cut(s) 143, 378, 447, 512, 734, 1114
HspAI GCGC 1 cut(s) 476
Ksp22I TGATCA 1 cut(s) 51
Kzo9I GATC 3 cut(s) 4, 51, 1325
LmnI GCTCC 1 cut(s) 319
Lsp1109I GCAGC 5 cut(s) 385, 727, 1105, 1112, 1349
LweI GCATC 3 cut(s) 522, 1375, 1389
MaeI CTAG 6 cut(s) 132, 371, 386, 677, 723, 1445
MaeII ACGT 5 cut(s) 89, 116, 338, 650, 1441
MaeIII GTNAC 4 cut(s) 112, 134, 377, 1300
MalI GATC 3 cut(s) 6, 53, 1327
MboI GATC 3 cut(s) 4, 51, 1325
MboII GAAGA 4 cut(s) 259, 848, 1343, 1480
MhlI GDGCHC 5 cut(s) 192, 316, 1218, 1291, 1417
MlsI TGGCCA 1 cut(s) 231
MluCI AATT 4 cut(s) 595, 792, 1122, 1458
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 1 cut(s) 280
Mox20I TGGCCA 1 cut(s) 231
MscI TGGCCA 1 cut(s) 231
MseI TTAA 6 cut(s) 168, 243, 321, 959, 1080, 1209
MslI CAYNNNNRTG 1 cut(s) 509
Msp20I TGGCCA 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 2 cut(s) 258, 430
MspR9I CCNGG 4 cut(s) 39, 223, 259, 879
Mva1269I GAATGC 1 cut(s) 646
MvaI CCWGG 3 cut(s) 39, 223, 879
MwoI GCNNNNNNNGC 6 cut(s) 371, 1044, 1097, 1127, 1244, 1421
NciI CCSGG 1 cut(s) 259
NdeII GATC 3 cut(s) 4, 51, 1325
NlaIII CATG 6 cut(s) 143, 378, 447, 512, 734, 1114
NlaIV GGNNCC 2 cut(s) 315, 1216
NspI RCATGY 2 cut(s) 378, 447
PaeR7I CTCGAG 2 cut(s) 1086, 1284
PciI ACATGT 1 cut(s) 443
PctI GAATGC 1 cut(s) 646
PfeI GAWTC 3 cut(s) 519, 1050, 1280
PflFI GACNNNGTC 1 cut(s) 253
PflMI CCANNNNNTGG 1 cut(s) 827
PkrI GCNGC 5 cut(s) 400, 742, 1102, 1120, 1339
PleI GAGTC 1 cut(s) 279
PpsI GAGTC 1 cut(s) 279
Ppu21I YACGTR 1 cut(s) 90
PscI ACATGT 1 cut(s) 443
PshBI ATTAAT 1 cut(s) 1209
Psp6I CCWGG 3 cut(s) 37, 221, 877
PspFI CCCAGC 3 cut(s) 309, 401, 827
PspGI CCWGG 3 cut(s) 37, 221, 877
PspN4I GGNNCC 2 cut(s) 315, 1216
PspOMI GGGCCC 1 cut(s) 1214
PspPI GGNCC 5 cut(s) 214, 424, 1214, 1215, 1346
PspXI VCTCGAGB 1 cut(s) 1086
PstI CTGCAG 2 cut(s) 1240, 1249
PstNI CAGNNNCTG 2 cut(s) 1244, 1304
PsyI GACNNNGTC 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 5 cut(s) 395, 494, 871, 941, 1321
RsaNI GTAC 5 cut(s) 394, 493, 870, 940, 1320
RseI CAYNNNNRTG 1 cut(s) 509
SaqAI TTAA 6 cut(s) 168, 243, 321, 959, 1080, 1209
SatI GCNGC 5 cut(s) 399, 741, 1101, 1119, 1338
Sau3AI GATC 3 cut(s) 4, 51, 1325
Sau96I GGNCC 5 cut(s) 214, 424, 1214, 1215, 1346
SchI GAGTC 1 cut(s) 280
ScrFI CCNGG 4 cut(s) 39, 223, 259, 879
SduI GDGCHC 5 cut(s) 192, 316, 1218, 1291, 1417
SfaNI GCATC 3 cut(s) 522, 1375, 1389
SfcI CTRYAG 3 cut(s) 1095, 1236, 1245
Sfr274I CTCGAG 2 cut(s) 1086, 1284
SinI GGWCC 3 cut(s) 214, 424, 1346
SlaI CTCGAG 2 cut(s) 1086, 1284
SmiMI CAYNNNNRTG 1 cut(s) 509
SmlI CTYRAG 2 cut(s) 1086, 1284
SmoI CTYRAG 2 cut(s) 1086, 1284
SnaBI TACGTA 1 cut(s) 90
Sse9I AATT 4 cut(s) 595, 792, 1122, 1458
SsiI CCGC 3 cut(s) 669, 1047, 1424
SspI AATATT 2 cut(s) 664, 817
SspMI CTAG 6 cut(s) 132, 371, 386, 677, 723, 1445
StyD4I CCNGG 4 cut(s) 37, 221, 257, 877
StyI CCWWGG 2 cut(s) 327, 1252
TaaI ACNGT 6 cut(s) 22, 253, 1203, 1265, 1300, 1482
TaiI ACGT 5 cut(s) 92, 119, 341, 653, 1444
TaqI TCGA 2 cut(s) 1087, 1285
TasI AATT 4 cut(s) 595, 792, 1122, 1458
TatI WGTACW 1 cut(s) 939
TfiI GAWTC 3 cut(s) 519, 1050, 1280
Tru1I TTAA 6 cut(s) 168, 243, 321, 959, 1080, 1209
Tru9I TTAA 6 cut(s) 168, 243, 321, 959, 1080, 1209
TscAI CASTG 4 cut(s) 27, 258, 1296, 1498
TseI GCWGC 5 cut(s) 398, 740, 1100, 1118, 1337
TspDTI ATGAA 3 cut(s) 497, 1099, 1535
TspRI CASTG 4 cut(s) 27, 258, 1296, 1498
Tth111I GACNNNGTC 1 cut(s) 253
Van91I CCANNNNNTGG 1 cut(s) 827
VneI GTGCAC 1 cut(s) 1413
VpaK11BI GGWCC 3 cut(s) 214, 424, 1346
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 1 cut(s) 1458
XceI RCATGY 2 cut(s) 378, 447
XhoI CTCGAG 2 cut(s) 1086, 1284
XspI CTAG 6 cut(s) 132, 371, 386, 677, 723, 1445
ZraI GACGTC 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.