Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007771

Physical Location & Seq

Genomic Coordinates Forward (+)

7766168 .. 7773057

Gene Structure 6890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G063800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGACTTCACTTCCCCTTCCATTGACTTCATCTTCATCTTGGCCTTCATCATATCCATCCCAAGTTCACTTTCCGTACCATTTATCGTGCTTCATGGCATTGGAGATCAGTGCTCTAATCGAGGAGTTAAACAGTTTACAGAGGAACTGAGGAACTTTGCTGCTACTGAAGGATATTGCATAGAAGTTGGCGATGGAACATGGGATTCCTGGTTTCTGCCTCTTGAGGAACAGACCAGAATTGTTTGTGACAAGGTAAAAGAAATGGAAGAACTGAGACAAGGTTACAACATTGTTGGTCTCTCCCAGGGTAATTTGATTGGCCGAGGTGTTGTAGAATTTTGCATCGATGGACCTCCTGTTAAGAATTTTATCTCTTTGGGAGGACCTCATGCGGGTACTGCTTCGGTGCCTCTTTGTGGTTCTGGTATATTTTGCATTATTGCAAACCAGCTACTCAAATCAGAGATCTACTCTGACTATATCCAAGCTCACTTGGCTCCCAGCGGTTATCTTAAATTACCAAATGCAATGGCTGACTATTTAGAAAAATGTAAGTTTCTTCCAAAGCTCAACAACGAACGACCGGATGGGAAAAACTCCACTCTCAAGGAAAGGTTTAGTAGCTTAGAGAACCTGGTGCTTATCATGTTTGAGCATGACACTGTTTTGATACCTAAGGAGACCTCATGGTTTGGTTATTACCAAGATGATACCTTCAAATCAATTTTAAGTCCACGGCAGACCAATCTCTATAAGGAGGACTGGATCGGTTTGAGAGCCTTGGATGAAGCTGGAAGGGTCAAGTACATCAGTGTTCCAGGAGGTCATCTCGGAATCTCCACGAGCGACATGATGAAGCATGTGGTACCTTATTTGAACAGTTTAGCATCAACAGAGATTGGAAAAAAGGAAGGTAACGATCCTAGAATGAGTGGAGTTCAACATGGAATGCCTCTTTTGGATGAGAAAGCATCATCTGAACTTGTTCTAGAAGGATCATCATCATACAGATGGCCCTTACCAGTCAAGACATTGTTCAGTGAACTTCTTGGGCTCACAGAAGACGAGTCACTGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0002084 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0006464 GO:0006807 GO:0006810 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007275 GO:0007610 GO:0008150 GO:0008152 GO:0008474 GO:0009056 GO:0009057 GO:0009791 GO:0009987 GO:0016043 GO:0016192 GO:0016787 GO:0016788 GO:0016790 GO:0018991 GO:0019098 GO:0019538 GO:0022414 GO:0030163 GO:0032501 GO:0032502 GO:0032504 GO:0035601 GO:0036211 GO:0042157 GO:0042159 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048609 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0071840 GO:0098599 GO:0098657 GO:0098732 GO:0098734 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00062 ko01100 ko01212 ko04142 map00062 map01100 map01212 map04142

Pfam Domains

Protein Families

Palm_thioest

Protein Analysis

361

Amino Acids

39.97

Weight (kDa)

5.01

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17480 AT4G17480 AT4G17480 AT4G17480
fragaria_vesca	FvH4_5g19650 FvH4_5g19650 FvH4_5g19650 FvH4_5g19650
malus_domestica	MD04G1061600.v1.1
prunus_persica	Prupe.5G063800_v2.0.a1 Prupe.5G063800_v2.0.a1
pyrus_communis	pycom04g05530 pycom06g04640
rosa_chinensis	RchiOBHm_Chr7g0204381
rosa_laevigata	RLG00000003468
rosa_multiflora	Rmu_sc0002918.1_g000006
rosa_roxburghii	Rroxscaffold_3G00253180
rosa_rugosa	Rorug07G0082700 Rorug07G0082800
rosa_samantha	Rh7AG213000 Rh7BG211100 Rh7CG226100 Rh7DG220300
rosa_wichuraiana	Rw7G018450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	868
AccB1I	GGYRCC	2 cut(s)	409, 868
AciI	CCGC	2 cut(s)	395, 507
AclWI	GGATC	3 cut(s)	776, 917, 1006
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	2 cut(s)	338, 367
AcuI	CTGAAG	1 cut(s)	189
AfaI	GTAC	4 cut(s)	78, 400, 809, 870
AfiI	CCNNNNNNNGG	2 cut(s)	395, 419
AgsI	TTSAA	3 cut(s)	721, 880, 944
AjnI	CCWGG	4 cut(s)	209, 306, 636, 820
AjuI	GAANNNNNNNTTGG	2 cut(s)	55, 87
AluBI	AGCT	5 cut(s)	454, 491, 571, 627, 794
AluI	AGCT	5 cut(s)	454, 491, 571, 627, 794
Alw21I	GWGCWC	1 cut(s)	116
Alw26I	GTCTC	3 cut(s)	271, 305, 677
AlwI	GGATC	3 cut(s)	776, 917, 1006
AoxI	GGCC	3 cut(s)	42, 322, 1016
ApeKI	GCWGC	1 cut(s)	161
ApoI	RAATTY	2 cut(s)	338, 367
Asp700I	GAANNNNTTC	1 cut(s)	987
Asp718I	GGTACC	1 cut(s)	868
AspS9I	GGNCC	3 cut(s)	353, 386, 1017
AvaII	GGWCC	2 cut(s)	353, 386
AxyI	CCTNAGG	1 cut(s)	678
BanI	GGYRCC	2 cut(s)	409, 868
BanII	GRGCYC	1 cut(s)	1059
BauI	CACGAG	1 cut(s)	844
BbsI	GAAGAC	1 cut(s)	1071
Bbv12I	GWGCWC	1 cut(s)	116
BbvI	GCAGC	1 cut(s)	148
BccI	CCATC	5 cut(s)	65, 188, 344, 584, 1008
BceAI	ACGGC	1 cut(s)	755
BciT130I	CCWGG	4 cut(s)	211, 308, 638, 822
BcoDI	GTCTC	3 cut(s)	271, 305, 677
BfaI	CTAG	2 cut(s)	927, 992
BglII	AGATCT	1 cut(s)	468
BisI	GCNGC	1 cut(s)	162
BlsI	GCNGC	1 cut(s)	163
Bme1390I	CCNGG	4 cut(s)	211, 308, 638, 822
Bme18I	GGWCC	2 cut(s)	353, 386
BmgT120I	GGNCC	3 cut(s)	353, 386, 1017
BmiI	GGNNCC	3 cut(s)	411, 501, 870
BmrFI	CCNGG	4 cut(s)	211, 308, 638, 822
BmsI	GCATC	3 cut(s)	354, 899, 983
BpiI	GAAGAC	1 cut(s)	1071
BplI	GAGNNNNNCTC	4 cut(s)	458, 490, 816, 848
BpuEI	CTTGAG	2 cut(s)	245, 593
Bsa29I	ATCGAT	1 cut(s)	348
BsaBI	GATNNNNATC	1 cut(s)	1003
BsaI	GGTCTC	2 cut(s)	305, 677
BsaJI	CCNNGG	5 cut(s)	306, 307, 325, 737, 783
BsaWI	WCCGGW	1 cut(s)	586
Bsc4I	CCNNNNNNNGG	2 cut(s)	395, 419
Bse1I	ACTGG	2 cut(s)	770, 1025
Bse21I	CCTNAGG	1 cut(s)	678
Bse3DI	GCAATG	1 cut(s)	537
Bse8I	GATNNNNATC	1 cut(s)	1003
BseBI	CCWGG	4 cut(s)	211, 308, 638, 822
BseCI	ATCGAT	1 cut(s)	348
BseDI	CCNNGG	5 cut(s)	306, 307, 325, 737, 783
BseGI	GGATG	4 cut(s)	57, 595, 793, 970
BseJI	GATNNNNATC	1 cut(s)	1003
BseLI	CCNNNNNNNGG	2 cut(s)	395, 419
BseMI	GCAATG	1 cut(s)	537
BseMII	CTCAG	2 cut(s)	140, 266
BseNI	ACTGG	2 cut(s)	770, 1025
BseRI	GAGGAG	1 cut(s)	138
BseXI	GCAGC	1 cut(s)	148
BseYI	CCCAGC	1 cut(s)	503
Bsh1285I	CGRYCG	1 cut(s)	587
BshFI	GGCC	3 cut(s)	44, 324, 1018
BshNI	GGYRCC	2 cut(s)	409, 868
BshVI	ATCGAT	1 cut(s)	348
BsiEI	CGRYCG	1 cut(s)	587
BsiHKAI	GWGCWC	1 cut(s)	116
BsiSI	CCGG	1 cut(s)	587
BslI	CCNNNNNNNGG	2 cut(s)	395, 419
BsmAI	GTCTC	3 cut(s)	271, 305, 677
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	3 cut(s)	44, 324, 1018
Bso31I	GGTCTC	2 cut(s)	305, 677
Bsp1286I	GDGCHC	2 cut(s)	116, 1059
Bsp143I	GATC	5 cut(s)	106, 468, 768, 922, 998
BspACI	CCGC	2 cut(s)	395, 507
BspANI	GGCC	3 cut(s)	44, 324, 1018
BspCNI	CTCAG	2 cut(s)	141, 267
BspDI	ATCGAT	1 cut(s)	348
BspLI	GGNNCC	3 cut(s)	411, 501, 870
BspPI	GGATC	3 cut(s)	776, 917, 1006
BspT107I	GGYRCC	2 cut(s)	409, 868
BspTNI	GGTCTC	2 cut(s)	305, 677
BsrDI	GCAATG	1 cut(s)	537
BsrI	ACTGG	2 cut(s)	770, 1025
BssECI	CCNNGG	5 cut(s)	306, 307, 325, 737, 783
BssMI	GATC	5 cut(s)	106, 468, 768, 922, 998
BssSI	CACGAG	1 cut(s)	844
BssT1I	CCWWGG	1 cut(s)	783
Bst2BI	CACGAG	1 cut(s)	844
Bst2UI	CCWGG	4 cut(s)	211, 308, 638, 822
Bst4CI	ACNGT	3 cut(s)	135, 667, 884
BstDEI	CTNAG	5 cut(s)	149, 275, 628, 678, 1080
BstDSI	CCRYGG	1 cut(s)	737
BstF5I	GGATG	4 cut(s)	57, 595, 793, 970
BstKTI	GATC	5 cut(s)	109, 471, 771, 925, 1001
BstMAI	GTCTC	3 cut(s)	271, 305, 677
BstMBI	GATC	5 cut(s)	106, 468, 768, 922, 998
BstMCI	CGRYCG	1 cut(s)	587
BstMWI	GCNNNNNNNGC	2 cut(s)	401, 497
BstNI	CCWGG	4 cut(s)	211, 308, 638, 822
BstNSI	RCATGY	1 cut(s)	866
BstSCI	CCNGG	4 cut(s)	209, 306, 636, 820
BstV1I	GCAGC	1 cut(s)	148
BstV2I	GAAGAC	1 cut(s)	1071
BstX2I	RGATCY	1 cut(s)	468
BstYI	RGATCY	1 cut(s)	468
Bsu15I	ATCGAT	1 cut(s)	348
Bsu36I	CCTNAGG	1 cut(s)	678
BsuRI	GGCC	3 cut(s)	44, 324, 1018
BsuTUI	ATCGAT	1 cut(s)	348
BtgI	CCRYGG	1 cut(s)	737
BtgZI	GCGATG	1 cut(s)	207
BtsCI	GGATG	4 cut(s)	57, 595, 793, 970
BtsI	GCAGTG	1 cut(s)	1073
BtsIMutI	CAGTG	5 cut(s)	116, 663, 820, 1048, 1073
Cfr13I	GGNCC	3 cut(s)	353, 386, 1017
ClaI	ATCGAT	1 cut(s)	348
CsiI	ACCWGGT	1 cut(s)	636
Csp6I	GTAC	4 cut(s)	77, 399, 808, 869
CviAII	CATG	9 cut(s)	95, 201, 392, 649, 659, 690, 853, 863, 947
CviQI	GTAC	4 cut(s)	77, 399, 808, 869
DdeI	CTNAG	5 cut(s)	149, 275, 628, 678, 1080
DpnI	GATC	5 cut(s)	108, 470, 770, 924, 1000
DpnII	GATC	5 cut(s)	106, 468, 768, 922, 998
EaeI	YGGCCR	1 cut(s)	322
Eco130I	CCWWGG	1 cut(s)	783
Eco24I	GRGCYC	1 cut(s)	1059
Eco31I	GGTCTC	2 cut(s)	305, 677
Eco47I	GGWCC	2 cut(s)	353, 386
Eco57I	CTGAAG	1 cut(s)	189
Eco81I	CCTNAGG	1 cut(s)	678
EcoO109I	RGGNCCY	1 cut(s)	386
EcoRII	CCWGG	4 cut(s)	209, 306, 636, 820
EcoT14I	CCWWGG	1 cut(s)	783
EcoT38I	GRGCYC	1 cut(s)	1059
ErhI	CCWWGG	1 cut(s)	783
FaeI	CATG	9 cut(s)	98, 204, 395, 652, 662, 693, 856, 866, 950
FatI	CATG	9 cut(s)	94, 200, 391, 648, 658, 689, 852, 862, 946
FauI	CCCGC	1 cut(s)	388
Fnu4HI	GCNGC	1 cut(s)	162
FokI	GGATG	4 cut(s)	44, 602, 800, 977
FriOI	GRGCYC	1 cut(s)	1059
Fsp4HI	GCNGC	1 cut(s)	162
FspBI	CTAG	2 cut(s)	927, 992
GluI	GCNGC	1 cut(s)	162
GsaI	CCCAGC	1 cut(s)	507
HaeIII	GGCC	3 cut(s)	44, 324, 1018
HapII	CCGG	1 cut(s)	587
Hin1II	CATG	9 cut(s)	98, 204, 395, 652, 662, 693, 856, 866, 950
HinfI	GANTC	3 cut(s)	206, 837, 1070
HpaII	CCGG	1 cut(s)	587
Hpy166II	GTNNAC	4 cut(s)	68, 138, 737, 1046
Hpy188I	TCNGA	4 cut(s)	466, 478, 836, 982
Hpy188III	TCNNGA	3 cut(s)	224, 992, 1030
Hpy8I	GTNNAC	4 cut(s)	68, 138, 737, 1046
HpyAV	CCTTC	7 cut(s)	27, 55, 164, 727, 792, 908, 989
HpyCH4III	ACNGT	3 cut(s)	135, 667, 884
HpyCH4V	TGCA	5 cut(s)	180, 345, 438, 446, 530
HpyF10VI	GCNNNNNNNGC	2 cut(s)	401, 497
HpyF3I	CTNAG	5 cut(s)	149, 275, 628, 678, 1080
Hsp92II	CATG	9 cut(s)	98, 204, 395, 652, 662, 693, 856, 866, 950
KpnI	GGTACC	1 cut(s)	872
Kzo9I	GATC	5 cut(s)	106, 468, 768, 922, 998
LmnI	GCTCC	1 cut(s)	505
Lsp1109I	GCAGC	1 cut(s)	148
LweI	GCATC	3 cut(s)	354, 899, 983
MabI	ACCWGGT	1 cut(s)	636
MaeI	CTAG	2 cut(s)	927, 992
MaeIII	GTNAC	4 cut(s)	248, 284, 917, 1071
MalI	GATC	5 cut(s)	108, 470, 770, 924, 1000
MboI	GATC	5 cut(s)	106, 468, 768, 922, 998
MboII	GAAGA	4 cut(s)	25, 281, 554, 1076
MflI	RGATCY	1 cut(s)	468
MhlI	GDGCHC	2 cut(s)	116, 1059
MluCI	AATT	6 cut(s)	240, 313, 338, 367, 518, 726
MlyI	GAGTC	1 cut(s)	1079
MroXI	GAANNNNTTC	1 cut(s)	987
MseI	TTAA	4 cut(s)	129, 363, 516, 731
MslI	CAYNNNNRTG	1 cut(s)	1012
MspA1I	CMGCKG	1 cut(s)	507
MspI	CCGG	1 cut(s)	587
MspR9I	CCNGG	4 cut(s)	211, 308, 638, 822
Mva1269I	GAATGC	1 cut(s)	957
MvaI	CCWGG	4 cut(s)	211, 308, 638, 822
MwoI	GCNNNNNNNGC	2 cut(s)	401, 497
NdeII	GATC	5 cut(s)	106, 468, 768, 922, 998
NlaIII	CATG	9 cut(s)	98, 204, 395, 652, 662, 693, 856, 866, 950
NlaIV	GGNNCC	3 cut(s)	411, 501, 870
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	2 cut(s)	248, 1071
NspI	RCATGY	1 cut(s)	866
PasI	CCCWGGG	1 cut(s)	307
PctI	GAATGC	1 cut(s)	957
PdmI	GAANNNNTTC	1 cut(s)	987
PfeI	GAWTC	2 cut(s)	206, 837
PfoI	TCCNGGA	1 cut(s)	820
PkrI	GCNGC	1 cut(s)	163
PleI	GAGTC	1 cut(s)	1078
PpsI	GAGTC	1 cut(s)	1078
PpuMI	RGGWCCY	1 cut(s)	386
Psp5II	RGGWCCY	1 cut(s)	386
Psp6I	CCWGG	4 cut(s)	209, 306, 636, 820
PspFI	CCCAGC	1 cut(s)	503
PspGI	CCWGG	4 cut(s)	209, 306, 636, 820
PspN4I	GGNNCC	3 cut(s)	411, 501, 870
PspPI	GGNCC	3 cut(s)	353, 386, 1017
PspPPI	RGGWCCY	1 cut(s)	386
PsuI	RGATCY	1 cut(s)	468
RsaI	GTAC	4 cut(s)	78, 400, 809, 870
RsaNI	GTAC	4 cut(s)	77, 399, 808, 869
RseI	CAYNNNNRTG	1 cut(s)	1012
SaqAI	TTAA	4 cut(s)	129, 363, 516, 731
SatI	GCNGC	1 cut(s)	162
Sau3AI	GATC	5 cut(s)	106, 468, 768, 922, 998
Sau96I	GGNCC	3 cut(s)	353, 386, 1017
SchI	GAGTC	1 cut(s)	1079
ScrFI	CCNGG	4 cut(s)	211, 308, 638, 822
SduI	GDGCHC	2 cut(s)	116, 1059
SexAI	ACCWGGT	1 cut(s)	636
SfaNI	GCATC	3 cut(s)	354, 899, 983
SinI	GGWCC	2 cut(s)	353, 386
SmiMI	CAYNNNNRTG	1 cut(s)	1012
SmlI	CTYRAG	2 cut(s)	224, 608
SmoI	CTYRAG	2 cut(s)	224, 608
Sse9I	AATT	6 cut(s)	240, 313, 338, 367, 518, 726
SsiI	CCGC	2 cut(s)	395, 507
SspMI	CTAG	2 cut(s)	927, 992
StyD4I	CCNGG	4 cut(s)	209, 306, 636, 820
StyI	CCWWGG	1 cut(s)	783
TaaI	ACNGT	3 cut(s)	135, 667, 884
TaqI	TCGA	2 cut(s)	121, 348
TasI	AATT	6 cut(s)	240, 313, 338, 367, 518, 726
TatI	WGTACW	1 cut(s)	807
TfiI	GAWTC	2 cut(s)	206, 837
Tru1I	TTAA	4 cut(s)	129, 363, 516, 731
Tru9I	TTAA	4 cut(s)	129, 363, 516, 731
TscAI	CASTG	5 cut(s)	116, 670, 820, 1048, 1080
TseFI	GTSAC	2 cut(s)	248, 1071
TseI	GCWGC	1 cut(s)	161
Tsp45I	GTSAC	2 cut(s)	248, 1071
TspDTI	ATGAA	6 cut(s)	19, 25, 37, 83, 804, 872
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	5 cut(s)	116, 670, 820, 1048, 1080
VpaK11BI	GGWCC	2 cut(s)	353, 386
XapI	RAATTY	2 cut(s)	338, 367
XbaI	TCTAGA	1 cut(s)	991
XceI	RCATGY	1 cut(s)	866
XmnI	GAANNNNTTC	1 cut(s)	987
XspI	CTAG	2 cut(s)	927, 992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.