Prupe.5G068700_v2.0.a1

Histidine triad nucleotide-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
8279244 .. 8281459
2216 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G068700.1

Sequence Viewer

Length: 456 bp
ATGGCGGCAGCAGCAGCAGCTTCACAGTGCATCTTCTGCCAGATCGCCAGCAAATCCACCTCTACCACTCTCCTCCACACTGATGACAAGGTCGTTGCTTTTCAAGACATCCGCCCGGCTGCTGTAAGGCATTACTTGGTTATTCCTGTGGATCACATTCCAACTGTTAAGGATCTTCAAAGGAAACCTGAAGACTACTCTTTGGTAAATCACATGTTAGAAGTGGGGAAAATGCTAGTTCAACGAGATGCACCTCAATGCCATCAGTACAGATTTGGCTTTCATCAACCTCCATTCAACTCTGTTAACCATCTTCACCTCCATTGTTTCGCACTGCCATACACACCCAGATGGAAGTGTATGAAATATATAGCCATGGGACCATTTGGATTTCTTGAGGCTGAAAAGTTGCTGGGTAAGATAAAGCCTCTGCCACAAGTTATTTCTAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

152

Amino Acids

17.11

Weight (kDa)

9.16

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 112
AclWI GGATC 2 cut(s) 159, 180
AcuI CTGAAG 1 cut(s) 210
AfaI GTAC 1 cut(s) 269
AflIII ACRYGT 1 cut(s) 213
AgsI TTSAA 4 cut(s) 104, 179, 242, 298
AluBI AGCT 1 cut(s) 20
AluI AGCT 1 cut(s) 20
AlwI GGATC 2 cut(s) 159, 180
ApeKI GCWGC 5 cut(s) 8, 11, 14, 17, 119
AspS9I GGNCC 1 cut(s) 380
AsuC2I CCSGG 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 308
AvaII GGWCC 1 cut(s) 380
BbsI GAAGAC 1 cut(s) 198
BbvI GCAGC 5 cut(s) 20, 23, 26, 29, 106
BccI CCATC 3 cut(s) 270, 318, 345
BcnI CCSGG 1 cut(s) 116
BfaI CTAG 1 cut(s) 236
BisI GCNGC 6 cut(s) 6, 9, 12, 15, 18, 120
BlsI GCNGC 6 cut(s) 7, 10, 13, 16, 19, 121
Bme1390I CCNGG 1 cut(s) 116
Bme18I GGWCC 1 cut(s) 380
BmgT120I GGNCC 1 cut(s) 380
BmiI GGNNCC 1 cut(s) 381
BmrFI CCNGG 1 cut(s) 116
BmsI GCATC 2 cut(s) 39, 238
BpiI GAAGAC 1 cut(s) 198
BpuEI CTTGAG 1 cut(s) 416
BpuMI CCSGG 1 cut(s) 116
BsaJI CCNNGG 1 cut(s) 375
BseDI CCNNGG 1 cut(s) 375
BseGI GGATG 1 cut(s) 108
BseRI GAGGAG 1 cut(s) 62
BseXI GCAGC 5 cut(s) 20, 23, 26, 29, 106
BseYI CCCAGC 1 cut(s) 412
BsiSI CCGG 1 cut(s) 116
BslFI GGGAC 1 cut(s) 393
BsmFI GGGAC 1 cut(s) 393
Bsp143I GATC 3 cut(s) 42, 151, 172
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 2 cut(s) 5, 112
BspLI GGNNCC 1 cut(s) 381
BspPI GGATC 2 cut(s) 159, 180
BssECI CCNNGG 1 cut(s) 375
BssMI GATC 3 cut(s) 42, 151, 172
BssT1I CCWWGG 1 cut(s) 375
Bst4CI ACNGT 2 cut(s) 27, 166
BstAPI GCANNNNNTGC 1 cut(s) 36
BstC8I GCNNGC 1 cut(s) 49
BstDSI CCRYGG 1 cut(s) 375
BstF5I GGATG 1 cut(s) 108
BstKTI GATC 3 cut(s) 45, 154, 175
BstMBI GATC 3 cut(s) 42, 151, 172
BstMWI GCNNNNNNNGC 4 cut(s) 11, 14, 17, 36
BstNSI RCATGY 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 114
BstV1I GCAGC 5 cut(s) 20, 23, 26, 29, 106
BstV2I GAAGAC 1 cut(s) 198
BstX2I RGATCY 1 cut(s) 172
BstYI RGATCY 1 cut(s) 172
BtgI CCRYGG 1 cut(s) 375
BtsCI GGATG 1 cut(s) 108
BtsI GCAGTG 1 cut(s) 332
BtsIMutI CAGTG 3 cut(s) 32, 78, 332
Cac8I GCNNGC 1 cut(s) 49
Cfr13I GGNCC 1 cut(s) 380
Csp6I GTAC 1 cut(s) 268
CviAII CATG 2 cut(s) 214, 376
CviJI RGCY 6 cut(s) 20, 119, 279, 374, 401, 427
CviKI_1 RGCY 6 cut(s) 20, 119, 279, 374, 401, 427
CviQI GTAC 1 cut(s) 268
DpnI GATC 3 cut(s) 44, 153, 174
DpnII GATC 3 cut(s) 42, 151, 172
EciI GGCGGA 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 375
Eco47I GGWCC 1 cut(s) 380
Eco57I CTGAAG 1 cut(s) 210
EcoT14I CCWWGG 1 cut(s) 375
ErhI CCWWGG 1 cut(s) 375
FaeI CATG 2 cut(s) 217, 379
FaiI YATR 6 cut(s) 215, 340, 362, 369, 371, 377
FaqI GGGAC 1 cut(s) 393
FatI CATG 2 cut(s) 213, 375
Fnu4HI GCNGC 6 cut(s) 6, 9, 12, 15, 18, 120
FokI GGATG 1 cut(s) 95
Fsp4HI GCNGC 6 cut(s) 6, 9, 12, 15, 18, 120
FspBI CTAG 1 cut(s) 236
GluI GCNGC 6 cut(s) 6, 9, 12, 15, 18, 120
GsaI CCCAGC 1 cut(s) 416
HapII CCGG 1 cut(s) 116
Hin1II CATG 2 cut(s) 217, 379
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HpaI GTTAAC 1 cut(s) 307
HpaII CCGG 1 cut(s) 116
HphI GGTGA 1 cut(s) 308
Hpy166II GTNNAC 1 cut(s) 307
Hpy188III TCNNGA 2 cut(s) 104, 395
Hpy8I GTNNAC 1 cut(s) 307
HpyCH4III ACNGT 2 cut(s) 27, 166
HpyCH4V TGCA 2 cut(s) 30, 251
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 14, 17, 36
Hsp92II CATG 2 cut(s) 217, 379
KspAI GTTAAC 1 cut(s) 307
Kzo9I GATC 3 cut(s) 42, 151, 172
LpnPI CCDG 7 cut(s) 53, 61, 129, 159, 201, 361, 398
Lsp1109I GCAGC 5 cut(s) 20, 23, 26, 29, 106
LweI GCATC 2 cut(s) 39, 238
MaeI CTAG 1 cut(s) 236
MalI GATC 3 cut(s) 44, 153, 174
MboI GATC 3 cut(s) 42, 151, 172
MboII GAAGA 4 cut(s) 25, 167, 203, 305
MflI RGATCY 1 cut(s) 172
MmeI TCCRAC 1 cut(s) 185
MnlI CCTC 7 cut(s) 70, 83, 264, 300, 329, 391, 438
MseI TTAA 2 cut(s) 168, 306
MslI CAYNNNNRTG 3 cut(s) 81, 256, 349
MspI CCGG 1 cut(s) 116
MspR9I CCNGG 1 cut(s) 116
MwoI GCNNNNNNNGC 4 cut(s) 11, 14, 17, 36
NciI CCSGG 1 cut(s) 116
NcoI CCATGG 1 cut(s) 375
NdeII GATC 3 cut(s) 42, 151, 172
NlaIII CATG 2 cut(s) 217, 379
NlaIV GGNNCC 1 cut(s) 381
NspI RCATGY 1 cut(s) 217
PciI ACATGT 1 cut(s) 213
PflFI GACNNNGTC 1 cut(s) 89
PkrI GCNGC 6 cut(s) 7, 10, 13, 16, 19, 121
PscI ACATGT 1 cut(s) 213
PspFI CCCAGC 1 cut(s) 412
PspN4I GGNNCC 1 cut(s) 381
PspPI GGNCC 1 cut(s) 380
PsuI RGATCY 1 cut(s) 172
PsyI GACNNNGTC 1 cut(s) 89
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
RseI CAYNNNNRTG 3 cut(s) 81, 256, 349
SaqAI TTAA 2 cut(s) 168, 306
SatI GCNGC 6 cut(s) 6, 9, 12, 15, 18, 120
Sau3AI GATC 3 cut(s) 42, 151, 172
Sau96I GGNCC 1 cut(s) 380
ScrFI CCNGG 1 cut(s) 116
SetI ASST 7 cut(s) 22, 62, 93, 190, 256, 292, 321
SfaNI GCATC 2 cut(s) 39, 238
SinI GGWCC 1 cut(s) 380
SmiMI CAYNNNNRTG 3 cut(s) 81, 256, 349
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
SsiI CCGC 2 cut(s) 5, 112
SspMI CTAG 1 cut(s) 236
StyD4I CCNGG 1 cut(s) 114
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 2 cut(s) 27, 166
TatI WGTACW 1 cut(s) 267
TauI GCSGC 1 cut(s) 8
Tru1I TTAA 2 cut(s) 168, 306
Tru9I TTAA 2 cut(s) 168, 306
TscAI CASTG 3 cut(s) 32, 85, 339
TseI GCWGC 5 cut(s) 8, 11, 14, 17, 119
TspDTI ATGAA 2 cut(s) 272, 377
TspRI CASTG 3 cut(s) 32, 85, 339
Tth111I GACNNNGTC 1 cut(s) 89
VpaK11BI GGWCC 1 cut(s) 380
XceI RCATGY 1 cut(s) 217
XspI CTAG 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.