Prupe.5G076800_v2.0.a1

21 kDa protein-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
9091326 .. 9092648
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G076800.1

Sequence Viewer

Length: 603 bp
ATGGAAGGTTATCTTATGCCTGCACTACTATTAGCTCTGCATATTCTCCAATTATTCAATCACATAAACCCCTGCACAGCCACTGGCAAAACAAACACTCAATACATAAAAAGATCATGCAGTGTCACAATTTATCCTAGATTGTGCTACCACAGCCTCTCAATCTATGCCGGAAAGATCAAGACCGACCCGAAAGTACTAGCTCATACTGCACTCAATGTGACCCTTGCAGCCACCCAAGAAAGTTCTGTGATAATGAGAAGGTTGTCAGAAATCCATGGTTTGAAGCCTATAGAGACTGCAGCAGTGCTTGATTGTATGGAGGAGATTGGTGACGCTATCCTTGAGCTTCAACAGTCCTTGGATGAGCTTGGTCATGTAGTTAGAGGCTCAAATTTCTGGTTTCAAATGAGTGATATTCAAACATGGGTTAGTGCTGCGTTGACAGATGAGGACACCTGCATGGATGGGTTTGAAGAGCATCATCTGAGAGGCAGGGTGGAGGCTGTTGTCCGTAGGTACACAGTGAATGTTGCACATCTGACAAGCAATGCTTTGGCACTCATCAACAGCTATGCCTCATCTAAAGCTGCCTTGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

201

Amino Acids

22.17

Weight (kDa)

6.12

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017295)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g00420
malus_domestica MD06G1064700.v1.1
prunus_persica Prupe.5G076800_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0202091
rosa_laevigata RLG00000003626
rosa_multiflora Rmu_sc0006592.1_g000014
rosa_roxburghii Rroxscaffold_3G00254880
rosa_rugosa Rorug07G0067900
rosa_samantha Rh7AG195400 Rh7BG196700 Rh7CG206500 Rh7DG202000
rosa_wichuraiana Rw7G017110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 467
AcsI RAATTY 1 cut(s) 394
AfaI GTAC 2 cut(s) 198, 521
AgsI TTSAA 6 cut(s) 58, 286, 353, 407, 422, 476
AluBI AGCT 6 cut(s) 35, 203, 349, 370, 573, 590
AluI AGCT 6 cut(s) 35, 203, 349, 370, 573, 590
Alw26I GTCTC 1 cut(s) 290
AlwNI CAGNNNCTG 1 cut(s) 83
ApeKI GCWGC 4 cut(s) 230, 302, 437, 590
ApoI RAATTY 1 cut(s) 394
AsuHPI GGTGA 1 cut(s) 344
BbvI GCAGC 4 cut(s) 242, 314, 424, 577
BccI CCATC 1 cut(s) 461
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 2 cut(s) 138, 200
BfmI CTRYAG 2 cut(s) 291, 300
BfuAI ACCTGC 1 cut(s) 467
BisI GCNGC 4 cut(s) 231, 303, 438, 591
BlsI GCNGC 4 cut(s) 232, 304, 439, 592
BmcAI AGTACT 1 cut(s) 198
BmsI GCATC 1 cut(s) 490
BpuEI CTTGAG 1 cut(s) 365
BsaJI CCNNGG 2 cut(s) 277, 360
Bse1I ACTGG 1 cut(s) 88
Bse3DI GCAATG 1 cut(s) 556
BseDI CCNNGG 2 cut(s) 277, 360
BseGI GGATG 2 cut(s) 370, 472
BseMI GCAATG 1 cut(s) 556
BseMII CTCAG 1 cut(s) 479
BseNI ACTGG 1 cut(s) 88
BseRI GAGGAG 1 cut(s) 338
BseXI GCAGC 4 cut(s) 242, 314, 424, 577
BsgI GTGCAG 3 cut(s) 6, 58, 195
BsiSI CCGG 1 cut(s) 171
BsmAI GTCTC 1 cut(s) 290
Bsp143I GATC 2 cut(s) 113, 177
Bsp19I CCATGG 1 cut(s) 277
BspCNI CTCAG 1 cut(s) 480
BspMAI CTGCAG 1 cut(s) 304
BspMI ACCTGC 1 cut(s) 467
BspQI GCTCTTC 1 cut(s) 471
BsrDI GCAATG 1 cut(s) 556
BsrI ACTGG 1 cut(s) 88
BssECI CCNNGG 2 cut(s) 277, 360
BssMI GATC 2 cut(s) 113, 177
BssT1I CCWWGG 2 cut(s) 277, 360
Bst4CI ACNGT 2 cut(s) 357, 526
Bst6I CTCTTC 1 cut(s) 471
BstC8I GCNNGC 1 cut(s) 21
BstDEI CTNAG 2 cut(s) 488, 600
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 2 cut(s) 370, 472
BstKTI GATC 2 cut(s) 116, 180
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 2 cut(s) 113, 177
BstMWI GCNNNNNNNGC 2 cut(s) 153, 209
BstSFI CTRYAG 2 cut(s) 291, 300
BstV1I GCAGC 4 cut(s) 242, 314, 424, 577
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 2 cut(s) 370, 472
BtsI GCAGTG 2 cut(s) 127, 312
BtsIMutI CAGTG 4 cut(s) 81, 127, 312, 531
BveI ACCTGC 1 cut(s) 467
Cac8I GCNNGC 1 cut(s) 21
CaiI CAGNNNCTG 1 cut(s) 83
CseI GACGC 1 cut(s) 344
Csp6I GTAC 2 cut(s) 197, 520
CviAII CATG 5 cut(s) 117, 278, 377, 426, 463
CviQI GTAC 2 cut(s) 197, 520
DdeI CTNAG 2 cut(s) 488, 600
DpnI GATC 2 cut(s) 115, 179
DpnII GATC 2 cut(s) 113, 177
Eam1104I CTCTTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 471
Eco130I CCWWGG 2 cut(s) 277, 360
EcoT14I CCWWGG 2 cut(s) 277, 360
ErhI CCWWGG 2 cut(s) 277, 360
FaeI CATG 5 cut(s) 120, 281, 380, 429, 466
FalI AAGNNNNNCTT 3 cut(s) 29, 538, 570
FatI CATG 5 cut(s) 116, 277, 376, 425, 462
Fnu4HI GCNGC 4 cut(s) 231, 303, 438, 591
FokI GGATG 2 cut(s) 377, 479
Fsp4HI GCNGC 4 cut(s) 231, 303, 438, 591
FspBI CTAG 2 cut(s) 138, 200
GluI GCNGC 4 cut(s) 231, 303, 438, 591
HapII CCGG 1 cut(s) 171
HgaI GACGC 1 cut(s) 344
Hin1II CATG 5 cut(s) 120, 281, 380, 429, 466
HincII GTYRAC 1 cut(s) 444
HindII GTYRAC 1 cut(s) 444
HpaII CCGG 1 cut(s) 171
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 444, 522
Hpy188I TCNGA 3 cut(s) 271, 489, 543
Hpy188III TCNNGA 1 cut(s) 181
Hpy8I GTNNAC 2 cut(s) 444, 522
HpyAV CCTTC 1 cut(s) 255
HpyCH4III ACNGT 2 cut(s) 357, 526
HpyCH4V TGCA 9 cut(s) 23, 40, 75, 120, 212, 230, 302, 462, 536
HpyF10VI GCNNNNNNNGC 2 cut(s) 153, 209
HpyF3I CTNAG 2 cut(s) 488, 600
Hsp92II CATG 5 cut(s) 120, 281, 380, 429, 466
Kzo9I GATC 2 cut(s) 113, 177
LguI GCTCTTC 1 cut(s) 471
LpnPI CCDG 7 cut(s) 33, 69, 85, 184, 385, 472, 481
Lsp1109I GCAGC 4 cut(s) 242, 314, 424, 577
LweI GCATC 1 cut(s) 490
MaeI CTAG 2 cut(s) 138, 200
MaeIII GTNAC 3 cut(s) 124, 220, 332
MalI GATC 2 cut(s) 115, 179
MboI GATC 2 cut(s) 113, 177
MboII GAAGA 1 cut(s) 488
MluCI AATT 3 cut(s) 50, 129, 394
MnlI CCTC 7 cut(s) 167, 316, 380, 445, 485, 496, 589
MslI CAYNNNNRTG 1 cut(s) 461
MspI CCGG 1 cut(s) 171
MwoI GCNNNNNNNGC 2 cut(s) 153, 209
NcoI CCATGG 1 cut(s) 277
NdeII GATC 2 cut(s) 113, 177
NlaIII CATG 5 cut(s) 120, 281, 380, 429, 466
NmuCI GTSAC 3 cut(s) 124, 220, 332
PaqCI CACCTGC 1 cut(s) 467
PciSI GCTCTTC 1 cut(s) 471
PkrI GCNGC 4 cut(s) 232, 304, 439, 592
PstI CTGCAG 1 cut(s) 304
PstNI CAGNNNCTG 1 cut(s) 83
RsaI GTAC 2 cut(s) 198, 521
RsaNI GTAC 2 cut(s) 197, 520
RseI CAYNNNNRTG 1 cut(s) 461
SapI GCTCTTC 1 cut(s) 471
SatI GCNGC 4 cut(s) 231, 303, 438, 591
Sau3AI GATC 2 cut(s) 113, 177
ScaI AGTACT 1 cut(s) 198
SfaNI GCATC 1 cut(s) 490
SfcI CTRYAG 2 cut(s) 291, 300
SmiMI CAYNNNNRTG 1 cut(s) 461
SmlI CTYRAG 1 cut(s) 344
SmoI CTYRAG 1 cut(s) 344
Sse9I AATT 3 cut(s) 50, 129, 394
SspMI CTAG 2 cut(s) 138, 200
StyI CCWWGG 2 cut(s) 277, 360
TaaI ACNGT 2 cut(s) 357, 526
TaqII GACCGA 1 cut(s) 200
TasI AATT 3 cut(s) 50, 129, 394
TatI WGTACW 1 cut(s) 196
TscAI CASTG 4 cut(s) 88, 127, 312, 531
TseFI GTSAC 3 cut(s) 124, 220, 332
TseI GCWGC 4 cut(s) 230, 302, 437, 590
Tsp45I GTSAC 3 cut(s) 124, 220, 332
TspGWI ACGGA 1 cut(s) 503
TspRI CASTG 4 cut(s) 88, 127, 312, 531
XapI RAATTY 1 cut(s) 394
XspI CTAG 2 cut(s) 138, 200
ZrmI AGTACT 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.