Prupe.5G083900_v2.0.a1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0011649
Physical Location & Seq
Reverse (-)
9648862 .. 9651237
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G083900.1

Sequence Viewer

Length: 1566 bp
ATGGCTGGGGGCGGTATAGCTCCATCGAGTGGTGCAAAACAATACCCTGGTAAACTCACAGCTAGGGTTGTTATAACATGTATTGTTGCGGCTACCGGTGGTCTGATTTTTGGGTACGACCTTGGAGTTTCAGGCGGTGTTACATCCATGGACTCTTTCTTGAAACAGTTCTTTCCAGCGGTTTACCAGAAAGAGTCTTCGATCAAGCCTTCCGACGATCAGTACTGCAAATTCGATAGCCAGACACTTACACTTTTCACATCTTCGCTATATTTGGCTGCTCTGGTTGCATGCGTTTTTGCATCAACTATAACCAGAGTGTGTGGTCGCAGGCTTACAATGATCTTGGGTGGAGTTCTTTTCTTGGCTGGTGCCTTGGTCAATGCTTTTGCTAATGCTGTTTGGATGCTTTATGTTGGTCGTCTATTTCTTGGTTTTGGTATTGGATGTGCCAATCAGTCTGTGCCGATCTATGTCTCTGAAACAGCCCCATCTAAATACCGTGGTGCTCTCAACATGATGTTCCAATTGTCCATCACAATTGGAATCCTTGCTGCTGGTGTGCTTAACTATTTCTTTGCCAAGATCAAAGGCGGTGGGGGATGGCGTTTGAGTTTGGGAGGTGCTGCAGTCCCTGCCATTATAATCATAGTTGGAGCATTGTTTTTACCTGACACACCAAACTCCTTGGTCGAGCGTGGGAAGCATGAGGAAGCCAAAGCTCAGCTTCTTAAGCTCAGAGGAGTTCCTAATGTTGATGAGGAGTTTAATGATCTAGTTGCGGCCAGTGAAGCATCCAAGTTGGTAAAACACCCATGGGTTAGCTTGTTGAGCAGGAAATATAGACCCCAGCTTGTGTTCGCAATCGGCATCCCCGCCTTCCAGCAACTTACTGGCATGAACGTGATCACGTTTTATGCTCCGGTCTTGTTCAAAACAATGGGATTTGGAAGCAGTGCTTCTCTCATGTCAGCTGTCATCACCAATCTCGTTAATGCTTTAGCTACATTTGTCTCAATTCTCACTGTTGATAAGGTTGGAAGGAGGAAGCTTTTCTTACAGGGTGGTTGCCAAATGCTCCTCATGCAGGTGGGCGTTGGAATTGCTATGGCTGTTAAATTTGGGGTCAGCGGCAACCCTGGAAAGTTGACACTAGGGTTTGCAGTTCCCTTGGTGGTCTTAATCTGTGTTTACGTGGCTGGATTTGCTTGGTCTTGGGGGCCTCTAGGATGGTTGGTGCCCAGTGAAATTTTCCCACTTGAAGTAAGGTCTGCTGCTCAGGCTATCAATGTCTCCGTCAACATGATTTTCACCTTTGCCATTGCCCAAGTCTTCACAGCCATGCTCTGCCACCTGAAGTTTGGCTTGTTCTTCTTCTTCTCTGTCTGTGTAGTGGTGATGAGCATTTTCATCTACAAATTGTTGCCCGAAACGAAAGGAGTTCCGATTGAAGAAATGCACACTGTGTGGGAGAATCATCCATATTGGCGTAAGTATGTTATTAAAGAGGAAGGCATTGCCATGGGCAAGGGCAAGGGCAAGAGCAAGGGAGGACAGAGTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

522

Amino Acids

55.93

Weight (kDa)

9.52

Isoelectric Point (pI)

32.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 74, 644
AarI CACCTGC 1 cut(s) 1078
Acc36I ACCTGC 1 cut(s) 1078
AccB1I GGYRCC 2 cut(s) 371, 1237
AccB7I CCANNNNNTGG 1 cut(s) 29
AciI CCGC 8 cut(s) 12, 89, 135, 179, 594, 782, 876, 1131
AcoI YGGCCR 1 cut(s) 783
AcsI RAATTY 3 cut(s) 230, 1118, 1248
AcuI CTGAAG 1 cut(s) 1376
AdeI CACNNNGTG 2 cut(s) 1465, 1467
AfaI GTAC 2 cut(s) 116, 224
AfiI CCNNNNNNNGG 2 cut(s) 29, 1087
AflII CTTAAG 1 cut(s) 731
AflIII ACRYGT 1 cut(s) 77
AgeI ACCGGT 1 cut(s) 95
AgsI TTSAA 4 cut(s) 163, 934, 1262, 1451
AjnI CCWGG 2 cut(s) 46, 1138
Alw21I GWGCWC 1 cut(s) 511
Alw26I GTCTC 3 cut(s) 481, 1018, 1297
AlwNI CAGNNNCTG 1 cut(s) 635
AoxI GGCC 2 cut(s) 783, 1220
ApeKI GCWGC 4 cut(s) 278, 554, 626, 1274
ApoI RAATTY 3 cut(s) 230, 1118, 1248
AsiGI ACCGGT 1 cut(s) 95
Asp700I GAANNNNTTC 2 cut(s) 167, 1052
AspS9I GGNCC 1 cut(s) 1220
AsuHPI GGTGA 3 cut(s) 973, 1303, 1408
BaeGI GKGCMC 1 cut(s) 1242
BanI GGYRCC 2 cut(s) 371, 1237
BbsI GAAGAC 2 cut(s) 189, 1324
Bbv12I GWGCWC 1 cut(s) 511
BbvI GCAGC 4 cut(s) 265, 541, 613, 1261
BccI CCATC 5 cut(s) 31, 499, 542, 597, 1224
BciT130I CCWGG 2 cut(s) 48, 1140
BclI TGATCA 1 cut(s) 906
BcoDI GTCTC 3 cut(s) 481, 1018, 1297
BfaI CTAG 4 cut(s) 63, 776, 1154, 1226
BfmI CTRYAG 1 cut(s) 627
BfrI CTTAAG 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 1078
BisI GCNGC 7 cut(s) 90, 279, 555, 627, 783, 1132, 1275
BlpI GCTNAGC 1 cut(s) 723
BlsI GCNGC 7 cut(s) 91, 280, 556, 628, 784, 1133, 1276
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 2 cut(s) 48, 1140
BmgT120I GGNCC 1 cut(s) 1220
BmiI GGNNCC 3 cut(s) 373, 1221, 1239
BmrFI CCNGG 2 cut(s) 48, 1140
BmrI ACTGGG 1 cut(s) 1236
BmsI GCATC 4 cut(s) 311, 396, 803, 879
BmuI ACTGGG 1 cut(s) 1236
BpiI GAAGAC 2 cut(s) 189, 1324
Bpu10I CCTNAGC 1 cut(s) 1278
Bpu1102I GCTNAGC 1 cut(s) 723
BsaAI YACGTR 1 cut(s) 1195
BsaWI WCCGGW 2 cut(s) 95, 922
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 1087
Bse118I RCCGGY 1 cut(s) 95
Bse1I ACTGG 3 cut(s) 786, 898, 1242
Bse3DI GCAATG 2 cut(s) 1320, 1515
BseBI CCWGG 2 cut(s) 48, 1140
BseGI GGATG 8 cut(s) 143, 411, 452, 608, 794, 870, 1235, 1477
BseLI CCNNNNNNNGG 2 cut(s) 29, 1087
BseMI GCAATG 2 cut(s) 1320, 1515
BseMII CTCAG 3 cut(s) 737, 751, 1292
BseNI ACTGG 3 cut(s) 786, 898, 1242
BseRI GAGGAG 3 cut(s) 756, 776, 1070
BseSI GKGCMC 1 cut(s) 1242
BseXI GCAGC 4 cut(s) 265, 541, 613, 1261
BseYI CCCAGC 2 cut(s) 5, 849
BshFI GGCC 2 cut(s) 785, 1222
BshNI GGYRCC 2 cut(s) 371, 1237
BshTI ACCGGT 1 cut(s) 95
BsiHKAI GWGCWC 1 cut(s) 511
BsiSI CCGG 2 cut(s) 96, 923
BslFI GGGAC 1 cut(s) 617
BslI CCNNNNNNNGG 2 cut(s) 29, 1087
BsmAI GTCTC 3 cut(s) 481, 1018, 1297
BsmFI GGGAC 1 cut(s) 617
BsnI GGCC 2 cut(s) 785, 1222
Bsp1286I GDGCHC 2 cut(s) 511, 1242
Bsp143I GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
Bsp1720I GCTNAGC 1 cut(s) 723
Bsp19I CCATGG 3 cut(s) 147, 815, 1521
BspACI CCGC 8 cut(s) 12, 89, 135, 179, 594, 782, 876, 1131
BspANI GGCC 2 cut(s) 785, 1222
BspCNI CTCAG 3 cut(s) 736, 750, 1291
BspLI GGNNCC 3 cut(s) 373, 1221, 1239
BspMAI CTGCAG 1 cut(s) 631
BspMI ACCTGC 1 cut(s) 1078
BspT107I GGYRCC 2 cut(s) 371, 1237
BspTI CTTAAG 1 cut(s) 731
BsrDI GCAATG 2 cut(s) 1320, 1515
BsrFI RCCGGY 1 cut(s) 95
BsrI ACTGG 3 cut(s) 786, 898, 1242
BssAI RCCGGY 1 cut(s) 95
BssMI GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
BssT1I CCWWGG 7 cut(s) 121, 147, 375, 687, 815, 1170, 1521
Bst2UI CCWGG 2 cut(s) 48, 1140
Bst4CI ACNGT 4 cut(s) 168, 503, 1027, 1465
BstAFI CTTAAG 1 cut(s) 731
BstAPI GCANNNNNTGC 1 cut(s) 635
BstBAI YACGTR 1 cut(s) 1195
BstC8I GCNNGC 2 cut(s) 292, 332
BstDEI CTNAG 3 cut(s) 723, 737, 1278
BstDSI CCRYGG 4 cut(s) 147, 502, 815, 1521
BstENI CCTNNNNNAGG 1 cut(s) 1085
BstF5I GGATG 8 cut(s) 143, 411, 452, 608, 794, 870, 1235, 1477
BstKTI GATC 7 cut(s) 204, 220, 345, 471, 588, 775, 909
BstMAI GTCTC 3 cut(s) 481, 1018, 1297
BstMBI GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
BstMWI GCNNNNNNNGC 9 cut(s) 287, 635, 703, 733, 791, 831, 1084, 1205, 1280
BstNI CCWGG 2 cut(s) 48, 1140
BstNSI RCATGY 2 cut(s) 81, 294
BstSCI CCNGG 2 cut(s) 46, 1138
BstSFI CTRYAG 1 cut(s) 627
BstSLI GKGCMC 1 cut(s) 1242
BstV1I GCAGC 4 cut(s) 265, 541, 613, 1261
BstV2I GAAGAC 2 cut(s) 189, 1324
BsuRI GGCC 2 cut(s) 785, 1222
BtgI CCRYGG 4 cut(s) 147, 502, 815, 1521
BtsCI GGATG 8 cut(s) 143, 411, 452, 608, 794, 870, 1235, 1477
BtsI GCAGTG 1 cut(s) 961
BtsIMutI CAGTG 5 cut(s) 793, 961, 1023, 1249, 1461
BveI ACCTGC 1 cut(s) 1078
Cac8I GCNNGC 2 cut(s) 292, 332
CaiI CAGNNNCTG 1 cut(s) 635
Cfr10I RCCGGY 1 cut(s) 95
Cfr13I GGNCC 1 cut(s) 1220
Csp6I GTAC 2 cut(s) 115, 223
CspAI ACCGGT 1 cut(s) 95
CspCI CAANNNNNGTGG 2 cut(s) 577, 612
CviQI GTAC 2 cut(s) 115, 223
DdeI CTNAG 3 cut(s) 723, 737, 1278
DpnI GATC 7 cut(s) 203, 219, 344, 470, 587, 774, 908
DpnII GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
DraIII CACNNNGTG 2 cut(s) 1465, 1467
EaeI YGGCCR 1 cut(s) 783
Eco130I CCWWGG 7 cut(s) 121, 147, 375, 687, 815, 1170, 1521
Eco57I CTGAAG 1 cut(s) 1376
EcoNI CCTNNNNNAGG 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 1220
EcoRII CCWGG 2 cut(s) 46, 1138
EcoT14I CCWWGG 7 cut(s) 121, 147, 375, 687, 815, 1170, 1521
ErhI CCWWGG 7 cut(s) 121, 147, 375, 687, 815, 1170, 1521
FalI AAGNNNNNCTT 8 cut(s) 711, 743, 943, 975, 1040, 1072, 1349, 1381
FaqI GGGAC 1 cut(s) 617
FauI CCCGC 1 cut(s) 883
FbaI TGATCA 1 cut(s) 906
Fnu4HI GCNGC 7 cut(s) 90, 279, 555, 627, 783, 1132, 1275
FokI GGATG 8 cut(s) 130, 418, 459, 615, 781, 857, 1242, 1464
Fsp4HI GCNGC 7 cut(s) 90, 279, 555, 627, 783, 1132, 1275
FspBI CTAG 4 cut(s) 63, 776, 1154, 1226
GluI GCNGC 7 cut(s) 90, 279, 555, 627, 783, 1132, 1275
GsaI CCCAGC 2 cut(s) 9, 853
HaeIII GGCC 2 cut(s) 785, 1222
HapII CCGG 2 cut(s) 96, 923
HincII GTYRAC 2 cut(s) 1149, 1300
HindII GTYRAC 2 cut(s) 1149, 1300
HindIII AAGCTT 1 cut(s) 1049
HinfI GANTC 4 cut(s) 152, 194, 546, 1474
HpaII CCGG 2 cut(s) 96, 923
HphI GGTGA 3 cut(s) 973, 1303, 1408
Hpy166II GTNNAC 5 cut(s) 53, 184, 1149, 1192, 1300
Hpy188I TCNGA 5 cut(s) 105, 214, 481, 740, 1446
Hpy188III TCNNGA 1 cut(s) 160
Hpy8I GTNNAC 5 cut(s) 53, 184, 1149, 1192, 1300
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 4 cut(s) 219, 889, 1035, 1505
HpyCH4III ACNGT 4 cut(s) 168, 503, 1027, 1465
HpyCH4IV ACGT 3 cut(s) 903, 911, 1194
HpyCH4V TGCA 8 cut(s) 35, 228, 290, 302, 629, 1087, 1163, 1459
HpyF10VI GCNNNNNNNGC 9 cut(s) 287, 635, 703, 733, 791, 831, 1084, 1205, 1280
HpyF3I CTNAG 3 cut(s) 723, 737, 1278
HpySE526I ACGT 3 cut(s) 903, 911, 1194
Ksp22I TGATCA 1 cut(s) 906
Kzo9I GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
LmnI GCTCC 4 cut(s) 25, 656, 925, 1083
Lsp1109I GCAGC 4 cut(s) 265, 541, 613, 1261
LweI GCATC 4 cut(s) 311, 396, 803, 879
MaeI CTAG 4 cut(s) 63, 776, 1154, 1226
MaeII ACGT 3 cut(s) 903, 911, 1194
MaeIII GTNAC 1 cut(s) 139
MalI GATC 7 cut(s) 203, 219, 344, 470, 587, 774, 908
MboI GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
MboII GAAGA 7 cut(s) 189, 255, 1324, 1363, 1366, 1369, 1463
MfeI CAATTG 2 cut(s) 527, 540
MhlI GDGCHC 2 cut(s) 511, 1242
MluCI AATT 8 cut(s) 230, 527, 540, 1017, 1101, 1118, 1248, 1418
MlyI GAGTC 2 cut(s) 146, 203
MmeI TCCRAC 4 cut(s) 237, 634, 1018, 1078
MnlI CCTC 9 cut(s) 614, 703, 734, 754, 1038, 1091, 1233, 1501, 1544
MroXI GAANNNNTTC 2 cut(s) 167, 1052
MseI TTAA 7 cut(s) 567, 732, 768, 993, 1116, 1181, 1503
MslI CAYNNNNRTG 4 cut(s) 902, 1088, 1340, 1520
MspA1I CMGCKG 3 cut(s) 179, 974, 1131
MspCI CTTAAG 1 cut(s) 731
MspI CCGG 2 cut(s) 96, 923
MspR9I CCNGG 2 cut(s) 48, 1140
MunI CAATTG 2 cut(s) 527, 540
MvaI CCWGG 2 cut(s) 48, 1140
MwoI GCNNNNNNNGC 9 cut(s) 287, 635, 703, 733, 791, 831, 1084, 1205, 1280
NcoI CCATGG 3 cut(s) 147, 815, 1521
NdeII GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
NlaIV GGNNCC 3 cut(s) 373, 1221, 1239
NspI RCATGY 2 cut(s) 81, 294
PaeI GCATGC 1 cut(s) 294
PaqCI CACCTGC 1 cut(s) 1078
PciI ACATGT 1 cut(s) 77
PdmI GAANNNNTTC 2 cut(s) 167, 1052
PfeI GAWTC 2 cut(s) 546, 1474
PflMI CCANNNNNTGG 1 cut(s) 29
PinAI ACCGGT 1 cut(s) 95
PkrI GCNGC 7 cut(s) 91, 280, 556, 628, 784, 1133, 1276
PleI GAGTC 2 cut(s) 146, 202
PpsI GAGTC 2 cut(s) 146, 202
Ppu21I YACGTR 1 cut(s) 1195
PscI ACATGT 1 cut(s) 77
PsiI TTATAA 2 cut(s) 74, 644
Psp6I CCWGG 2 cut(s) 46, 1138
PspFI CCCAGC 2 cut(s) 5, 849
PspGI CCWGG 2 cut(s) 46, 1138
PspN4I GGNNCC 3 cut(s) 373, 1221, 1239
PspPI GGNCC 1 cut(s) 1220
PstI CTGCAG 1 cut(s) 631
PstNI CAGNNNCTG 1 cut(s) 635
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 2 cut(s) 116, 224
RsaNI GTAC 2 cut(s) 115, 223
RseI CAYNNNNRTG 4 cut(s) 902, 1088, 1340, 1520
SaqAI TTAA 7 cut(s) 567, 732, 768, 993, 1116, 1181, 1503
SatI GCNGC 7 cut(s) 90, 279, 555, 627, 783, 1132, 1275
Sau3AI GATC 7 cut(s) 201, 217, 342, 468, 585, 772, 906
Sau96I GGNCC 1 cut(s) 1220
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 2 cut(s) 146, 203
ScrFI CCNGG 2 cut(s) 48, 1140
SduI GDGCHC 2 cut(s) 511, 1242
SfaNI GCATC 4 cut(s) 311, 396, 803, 879
SfcI CTRYAG 1 cut(s) 627
SmiMI CAYNNNNRTG 4 cut(s) 902, 1088, 1340, 1520
SmlI CTYRAG 1 cut(s) 731
SmoI CTYRAG 1 cut(s) 731
SphI GCATGC 1 cut(s) 294
Sse9I AATT 8 cut(s) 230, 527, 540, 1017, 1101, 1118, 1248, 1418
SsiI CCGC 8 cut(s) 12, 89, 135, 179, 594, 782, 876, 1131
SspMI CTAG 4 cut(s) 63, 776, 1154, 1226
StyD4I CCNGG 2 cut(s) 46, 1138
StyI CCWWGG 7 cut(s) 121, 147, 375, 687, 815, 1170, 1521
TaaI ACNGT 4 cut(s) 168, 503, 1027, 1465
TaiI ACGT 3 cut(s) 906, 914, 1197
TaqI TCGA 4 cut(s) 26, 200, 234, 693
TasI AATT 8 cut(s) 230, 527, 540, 1017, 1101, 1118, 1248, 1418
TatI WGTACW 1 cut(s) 222
TauI GCSGC 3 cut(s) 92, 785, 1134
TfiI GAWTC 2 cut(s) 546, 1474
Tru1I TTAA 7 cut(s) 567, 732, 768, 993, 1116, 1181, 1503
Tru9I TTAA 7 cut(s) 567, 732, 768, 993, 1116, 1181, 1503
TscAI CASTG 5 cut(s) 793, 961, 1030, 1249, 1468
TseI GCWGC 4 cut(s) 278, 554, 626, 1274
TspDTI ATGAA 2 cut(s) 914, 1399
TspGWI ACGGA 1 cut(s) 1285
TspRI CASTG 5 cut(s) 793, 961, 1030, 1249, 1468
Van91I CCANNNNNTGG 1 cut(s) 29
Vha464I CTTAAG 1 cut(s) 731
XagI CCTNNNNNAGG 1 cut(s) 1085
XapI RAATTY 3 cut(s) 230, 1118, 1248
XceI RCATGY 2 cut(s) 81, 294
XcmI CCANNNNNNNNNTGG 2 cut(s) 890, 1358
XmnI GAANNNNTTC 2 cut(s) 167, 1052
XspI CTAG 4 cut(s) 63, 776, 1154, 1226
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.