Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006474

Physical Location & Seq

Genomic Coordinates Forward (+)

10915288 .. 10921444

Gene Structure 6157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G101300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGATTTGCAGAGGCTGTGTGGGTTAGTGTTTGTGTCAGCTCTGATTCTACTGGTCTCTGAGCCTAGCTCTGTGACAGCTGGGGATATAGTGCATGATGACGATTCAGCTCCAAAGAAGCCTGGGTGTGAGAACAATTTCGTTTTGGTAAAAGTTCAAACTTGGGTTGATGGTGTAGAGGCAAATGAGTTTGTTGGCGTGGGTGCTAGATTTGGAACTACCATTGAATCAAAGGAGAAAAAAGCACAGCAAACTCGCCTTATTCTTTCAAATCCTCGTGATTGTTGTAACAAACCAAAGAATAAGCTTGCTGGAGATGTCATCATGGTGGACCGAGGCCACTGCAAATTCACAACTAAAGCAAATATTGCCCAAGAAGCTAATGCCTCCGCTGTACTCATTGTAAATAACCAGAAAGAACTTTACAAGATGGTGTGTGAGCCAGATGAAACTGCTTTAGATATACACATACCAGCTGTCATGCTCCCGCAGGATGCAGGTGCTACCTTGGAAAAGATGTTAATGAATAATTCATTGGTTTCTGTGCAGTTGTACTCACCGCAACGACCTGTTGTTGACATTGCGGAAGTATTTTTATGGTTGATGGCTGTCGGTACTATCTTGTGTGCATCTTATTGGTCTGCATGGAGTGCCAGAGAAGCATCTATTGAACAGGACAAGCTATTAAAGGATGCTTCTGATGAAATTCCAAGTGCCAAAGCTCCTTTAGGTGCCAGCGTAGTAGACATCAGCACAACATCAGCTGTCTTGTTTGTTATTATTGCTTCATGCTTCTTGGTTATACTCTACAAGCTTATGTCAGGCTGGTTTGTCGAGCTTTTGGTGGTTCTTTTTTGCATAGGTGGTGTAGAGGGTTTGCAAACTTGCTTGGTTGCGTTGTTATCGAGGTGGTTCAAACGTACTGGGGAATCATACATTAAAGTACCTATCTTGGGAGCAGTCTCATACCTTACTTTGGCTGTTTCTCCGTTCTGCATAGCATTTGCTGTTCTTTGGGCAGTTTTTCGCAACATTTCCTTTGCCTGGATTGGTCAAGATATACTTGGAATTGCACTGATAATCACAGTTCTTCAAATTGTTCGGATACCTAATCTCAAGGTAGGTACGGTCCTCCTCAGTTGTGCCTTCTTGTATGACATCTTTTGGGTGTTTGTTTCTAAGAAGTTGTTCCATGAAAGCGTGATGATTGTGGTAGCCCGTGGTGACAGAAGTGGAGAGGATGGTATTCCAATGCTACTAAAGATTCCACGCATGTTTGACCCTTGGGGTGGTTTCAGCATCATAGGATTCGGTGACATCCTCTTACCAGGCCTGCTTGTGGCATTCTCGCTCAGGTATGATTGGTTGGCAAATAAGGCACTTCGGGCTGGATACTTCTTATGGGCAATGATGGCTTATGGATTGGGTCTTCTCATCACATATGTGGCATTAAACTTGATGGATGGGCATGGCCAACCGGCACTGCTTTACATTGTTCCATTCACACTTGGAACTTTTCTGACATTAGGGAAGAAGAGAGGTGACTTACAGATTCTGTGGTGTAGAGGAGAACCAGAAAGGCCCTGCTCACATATTGAACTCGAACAGAGTCAAGAATTGGACGAAACAAAAAAAAGTAAGACAGCCTGTTCTTGTATGATATTTGTAGTGTTGGCATTTTATAATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005798 GO:0012505 GO:0016020 GO:0016021 GO:0030176 GO:0030660 GO:0031090 GO:0031224 GO:0031227 GO:0031410 GO:0031982 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071458 GO:0071556 GO:0097708 GO:0098552 GO:0098553 GO:0098554 GO:0098562 GO:0098588 GO:0098805 GO:0098827 GO:0098852

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_A22B

Protein Analysis

564

Amino Acids

62.06

Weight (kDa)

6.05

Isoelectric Point (pI)

40.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63690 AT1G63690
fragaria_vesca	FvH4_5g02620 FvH4_5g02620 FvH4_5g02620
malus_domestica	MD06G1085300.v1.1 MD14G1106400.v1.1
prunus_persica	Prupe.5G101300_v2.0.a1 Prupe.5G101300_v2.0.a1 Prupe.5G101300_v2.0.a1
pyrus_communis	pycom06g08140 pycom14g10140
rosa_chinensis	RchiOBHm_Chr7g0197471
rosa_laevigata	RLG00000003938
rosa_multiflora	Rmu_sc0013361.1_g000002
rosa_roxburghii	Rroxscaffold_3G00258440
rosa_rugosa	Rorug07G0039800 Rorug07G0039900 Rorug07G0040000 Rorug07G0040000 Rorug07G0040000
rosa_samantha	Rh7AG164900 Rh7BG167100 Rh7CG173400 Rh7DG166400
rosa_wichuraiana	Rw7G014380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1683
AarI	CACCTGC	1 cut(s)	488
Acc36I	ACCTGC	1 cut(s)	488
AccB1I	GGYRCC	1 cut(s)	731
AccI	GTMKAC	1 cut(s)	744
AciI	CCGC	4 cut(s)	390, 488, 560, 584
AcoI	YGGCCR	1 cut(s)	1471
AcsI	RAATTY	2 cut(s)	347, 705
AfaI	GTAC	6 cut(s)	396, 554, 616, 922, 945, 1126
AfiI	CCNNNNNNNGG	5 cut(s)	953, 976, 1044, 1289, 1339
AgsI	TTSAA	7 cut(s)	158, 227, 270, 671, 916, 1094, 1598
AjnI	CCWGG	3 cut(s)	121, 1043, 1327
AjuI	GAANNNNNNNTTGG	2 cut(s)	518, 550
AleI	CACNNNNGTG	1 cut(s)	1442
Alw26I	GTCTC	2 cut(s)	61, 967
AlwNI	CAGNNNCTG	2 cut(s)	16, 1555
AoxI	GGCC	4 cut(s)	337, 1330, 1471, 1580
ApoI	RAATTY	2 cut(s)	347, 705
Asp700I	GAANNNNTTC	2 cut(s)	137, 1187
AspS9I	GGNCC	3 cut(s)	331, 1129, 1581
AsuHPI	GGTGA	4 cut(s)	549, 1235, 1325, 1553
AvaII	GGWCC	2 cut(s)	331, 1129
BalI	TGGCCA	1 cut(s)	1473
BanI	GGYRCC	1 cut(s)	731
BauI	CACGAG	1 cut(s)	276
BbsI	GAAGAC	1 cut(s)	1421
BccI	CCATC	7 cut(s)	164, 424, 598, 1235, 1405, 1453, 1457
BcgI	CGANNNNNNTGC	2 cut(s)	324, 358
BciT130I	CCWGG	3 cut(s)	123, 1045, 1329
BciVI	GTATCC	2 cut(s)	1098, 1385
BcoDI	GTCTC	2 cut(s)	61, 967
BfaI	CTAG	2 cut(s)	66, 207
BfuAI	ACCTGC	1 cut(s)	488
BfuI	GTATCC	2 cut(s)	1098, 1385
Bme1390I	CCNGG	3 cut(s)	123, 1045, 1329
Bme18I	GGWCC	2 cut(s)	331, 1129
BmgT120I	GGNCC	3 cut(s)	331, 1129, 1581
BmiI	GGNNCC	1 cut(s)	733
BmrFI	CCNGG	3 cut(s)	123, 1045, 1329
BmrI	ACTGGG	1 cut(s)	933
BmsI	GCATC	5 cut(s)	484, 638, 671, 682, 1308
BmuI	ACTGGG	1 cut(s)	933
BpiI	GAAGAC	1 cut(s)	1421
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
BpmI	CTGGAG	1 cut(s)	333
Bpu10I	CCTNAGC	1 cut(s)	1352
BpuEI	CTTGAG	1 cut(s)	1100
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	5 cut(s)	122, 334, 507, 1219, 1283
Bsc4I	CCNNNNNNNGG	5 cut(s)	953, 976, 1044, 1289, 1339
Bse118I	RCCGGY	1 cut(s)	1477
Bse1I	ACTGG	2 cut(s)	57, 928
Bse3DI	GCAATG	2 cut(s)	579, 1413
BseBI	CCWGG	3 cut(s)	123, 1045, 1329
BseDI	CCNNGG	5 cut(s)	122, 334, 507, 1219, 1283
BseGI	GGATG	5 cut(s)	499, 697, 1246, 1317, 1468
BseLI	CCNNNNNNNGG	5 cut(s)	953, 976, 1044, 1289, 1339
BseMI	GCAATG	2 cut(s)	579, 1413
BseMII	CTCAG	3 cut(s)	51, 1150, 1366
BseNI	ACTGG	2 cut(s)	57, 928
BseRI	GAGGAG	2 cut(s)	1124, 1581
BseYI	CCCAGC	1 cut(s)	80
BsgI	GTGCAG	1 cut(s)	566
BshFI	GGCC	4 cut(s)	339, 1332, 1473, 1582
BshNI	GGYRCC	1 cut(s)	731
BsiSI	CCGG	1 cut(s)	1478
BslI	CCNNNNNNNGG	5 cut(s)	953, 976, 1044, 1289, 1339
BsmAI	GTCTC	2 cut(s)	61, 967
BsmI	GAATGC	1 cut(s)	1343
BsnI	GGCC	4 cut(s)	339, 1332, 1473, 1582
Bso31I	GGTCTC	1 cut(s)	61
BspACI	CCGC	4 cut(s)	390, 488, 560, 584
BspANI	GGCC	4 cut(s)	339, 1332, 1473, 1582
BspCNI	CTCAG	3 cut(s)	52, 1149, 1365
BspLI	GGNNCC	1 cut(s)	733
BspMI	ACCTGC	1 cut(s)	488
BspT107I	GGYRCC	1 cut(s)	731
BspTNI	GGTCTC	1 cut(s)	61
BsrDI	GCAATG	2 cut(s)	579, 1413
BsrFI	RCCGGY	1 cut(s)	1477
BsrI	ACTGG	2 cut(s)	57, 928
BssAI	RCCGGY	1 cut(s)	1477
BssECI	CCNNGG	5 cut(s)	122, 334, 507, 1219, 1283
BssSI	CACGAG	1 cut(s)	276
BssT1I	CCWWGG	2 cut(s)	507, 1283
Bst2BI	CACGAG	1 cut(s)	276
Bst2UI	CCWGG	3 cut(s)	123, 1045, 1329
Bst4CI	ACNGT	2 cut(s)	1087, 1129
Bst6I	CTCTTC	1 cut(s)	1529
BstAPI	GCANNNNNTGC	2 cut(s)	368, 650
BstC8I	GCNNGC	3 cut(s)	309, 736, 1334
BstDEI	CTNAG	4 cut(s)	60, 1136, 1179, 1352
BstDSI	CCRYGG	1 cut(s)	1219
BstF5I	GGATG	5 cut(s)	499, 697, 1246, 1317, 1468
BstMAI	GTCTC	2 cut(s)	61, 967
BstMWI	GCNNNNNNNGC	7 cut(s)	368, 377, 650, 659, 1376, 1385, 1412
BstNI	CCWGG	3 cut(s)	123, 1045, 1329
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	3 cut(s)	121, 1043, 1327
BstV2I	GAAGAC	1 cut(s)	1421
BsuI	GTATCC	2 cut(s)	1098, 1385
BsuRI	GGCC	4 cut(s)	339, 1332, 1473, 1582
BtgI	CCRYGG	1 cut(s)	1219
BtsCI	GGATG	5 cut(s)	499, 697, 1246, 1317, 1468
BtsI	GCAGTG	2 cut(s)	340, 1481
BtsIMutI	CAGTG	3 cut(s)	340, 1073, 1481
BveI	ACCTGC	1 cut(s)	488
Cac8I	GCNNGC	3 cut(s)	309, 736, 1334
CaiI	CAGNNNCTG	2 cut(s)	16, 1555
Cfr10I	RCCGGY	1 cut(s)	1477
Cfr13I	GGNCC	3 cut(s)	331, 1129, 1581
Csp6I	GTAC	6 cut(s)	395, 553, 615, 921, 944, 1125
CviAII	CATG	8 cut(s)	95, 325, 481, 645, 789, 1193, 1273, 1469
CviQI	GTAC	6 cut(s)	395, 553, 615, 921, 944, 1125
DdeI	CTNAG	4 cut(s)	60, 1136, 1179, 1352
EaeI	YGGCCR	1 cut(s)	1471
Eam1104I	CTCTTC	1 cut(s)	1529
EarI	CTCTTC	1 cut(s)	1529
Eco130I	CCWWGG	2 cut(s)	507, 1283
Eco147I	AGGCCT	1 cut(s)	1332
Eco31I	GGTCTC	1 cut(s)	61
Eco47I	GGWCC	2 cut(s)	331, 1129
EcoO109I	RGGNCCY	1 cut(s)	1581
EcoRII	CCWGG	3 cut(s)	121, 1043, 1327
EcoT14I	CCWWGG	2 cut(s)	507, 1283
ErhI	CCWWGG	2 cut(s)	507, 1283
FaeI	CATG	8 cut(s)	98, 328, 484, 648, 792, 1196, 1276, 1472
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FatI	CATG	8 cut(s)	94, 324, 480, 644, 788, 1192, 1272, 1468
FauI	CCCGC	1 cut(s)	495
FauNDI	CATATG	1 cut(s)	1441
FblI	GTMKAC	1 cut(s)	744
FokI	GGATG	5 cut(s)	506, 704, 1253, 1304, 1475
FspBI	CTAG	2 cut(s)	66, 207
GsaI	CCCAGC	1 cut(s)	84
GsuI	CTGGAG	1 cut(s)	333
HaeIII	GGCC	4 cut(s)	339, 1332, 1473, 1582
HapII	CCGG	1 cut(s)	1478
Hin1II	CATG	8 cut(s)	98, 328, 484, 648, 792, 1196, 1276, 1472
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HindIII	AAGCTT	2 cut(s)	305, 812
HinfI	GANTC	8 cut(s)	46, 104, 227, 929, 1264, 1308, 1552, 1609
HpaII	CCGG	1 cut(s)	1478
HphI	GGTGA	4 cut(s)	549, 1235, 1325, 1553
Hpy166II	GTNNAC	3 cut(s)	331, 577, 745
Hpy188I	TCNGA	5 cut(s)	45, 61, 700, 1104, 1521
Hpy188III	TCNNGA	3 cut(s)	278, 1055, 1613
Hpy8I	GTNNAC	3 cut(s)	331, 577, 745
HpyAV	CCTTC	1 cut(s)	1156
HpyCH4III	ACNGT	2 cut(s)	1087, 1129
HpyCH4IV	ACGT	1 cut(s)	919
HpyF10VI	GCNNNNNNNGC	7 cut(s)	368, 377, 650, 659, 1376, 1385, 1412
HpyF3I	CTNAG	4 cut(s)	60, 1136, 1179, 1352
HpySE526I	ACGT	1 cut(s)	919
Hsp92II	CATG	8 cut(s)	98, 328, 484, 648, 792, 1196, 1276, 1472
LmnI	GCTCC	4 cut(s)	115, 489, 727, 956
LweI	GCATC	5 cut(s)	484, 638, 671, 682, 1308
MaeI	CTAG	2 cut(s)	66, 207
MaeII	ACGT	1 cut(s)	919
MaeIII	GTNAC	5 cut(s)	73, 287, 1223, 1313, 1541
MboII	GAAGA	4 cut(s)	1082, 1421, 1543, 1546
MlsI	TGGCCA	1 cut(s)	1473
MluCI	AATT	7 cut(s)	136, 347, 529, 705, 1068, 1095, 1616
MluNI	TGGCCA	1 cut(s)	1473
MlyI	GAGTC	1 cut(s)	1618
Mox20I	TGGCCA	1 cut(s)	1473
MroXI	GAANNNNTTC	2 cut(s)	137, 1187
MscI	TGGCCA	1 cut(s)	1473
MseI	TTAA	4 cut(s)	521, 686, 939, 1451
MslI	CAYNNNNRTG	2 cut(s)	326, 1442
Msp20I	TGGCCA	1 cut(s)	1473
MspA1I	CMGCKG	4 cut(s)	80, 392, 476, 764
MspI	CCGG	1 cut(s)	1478
MspR9I	CCNGG	3 cut(s)	123, 1045, 1329
Mva1269I	GAATGC	1 cut(s)	1343
MvaI	CCWGG	3 cut(s)	123, 1045, 1329
MwoI	GCNNNNNNNGC	7 cut(s)	368, 377, 650, 659, 1376, 1385, 1412
NdeI	CATATG	1 cut(s)	1441
NlaIII	CATG	8 cut(s)	98, 328, 484, 648, 792, 1196, 1276, 1472
NlaIV	GGNNCC	1 cut(s)	733
NmuCI	GTSAC	4 cut(s)	73, 1223, 1313, 1541
NspI	RCATGY	1 cut(s)	1276
OliI	CACNNNNGTG	1 cut(s)	1442
PaqCI	CACCTGC	1 cut(s)	488
PceI	AGGCCT	1 cut(s)	1332
PctI	GAATGC	1 cut(s)	1343
PdmI	GAANNNNTTC	2 cut(s)	137, 1187
PfeI	GAWTC	7 cut(s)	46, 104, 227, 929, 1264, 1308, 1552
PleI	GAGTC	1 cut(s)	1617
PpsI	GAGTC	1 cut(s)	1617
PsiI	TTATAA	1 cut(s)	1683
Psp6I	CCWGG	3 cut(s)	121, 1043, 1327
PspFI	CCCAGC	1 cut(s)	80
PspGI	CCWGG	3 cut(s)	121, 1043, 1327
PspN4I	GGNNCC	1 cut(s)	733
PspPI	GGNCC	3 cut(s)	331, 1129, 1581
PstNI	CAGNNNCTG	2 cut(s)	16, 1555
PvuII	CAGCTG	3 cut(s)	80, 476, 764
RsaI	GTAC	6 cut(s)	396, 554, 616, 922, 945, 1126
RsaNI	GTAC	6 cut(s)	395, 553, 615, 921, 944, 1125
RseI	CAYNNNNRTG	2 cut(s)	326, 1442
SaqAI	TTAA	4 cut(s)	521, 686, 939, 1451
Sau96I	GGNCC	3 cut(s)	331, 1129, 1581
SchI	GAGTC	1 cut(s)	1618
ScrFI	CCNGG	3 cut(s)	123, 1045, 1329
SfaNI	GCATC	5 cut(s)	484, 638, 671, 682, 1308
SinI	GGWCC	2 cut(s)	331, 1129
SmiMI	CAYNNNNRTG	2 cut(s)	326, 1442
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
Sse9I	AATT	7 cut(s)	136, 347, 529, 705, 1068, 1095, 1616
SseBI	AGGCCT	1 cut(s)	1332
SsiI	CCGC	4 cut(s)	390, 488, 560, 584
SspI	AATATT	1 cut(s)	367
SspMI	CTAG	2 cut(s)	66, 207
StuI	AGGCCT	1 cut(s)	1332
StyD4I	CCNGG	3 cut(s)	121, 1043, 1327
StyI	CCWWGG	2 cut(s)	507, 1283
TaaI	ACNGT	2 cut(s)	1087, 1129
TaiI	ACGT	1 cut(s)	922
TaqI	TCGA	3 cut(s)	834, 905, 1602
TaqII	GACCGA	1 cut(s)	348
TasI	AATT	7 cut(s)	136, 347, 529, 705, 1068, 1095, 1616
TatI	WGTACW	2 cut(s)	394, 552
TfiI	GAWTC	7 cut(s)	46, 104, 227, 929, 1264, 1308, 1552
Tru1I	TTAA	4 cut(s)	521, 686, 939, 1451
Tru9I	TTAA	4 cut(s)	521, 686, 939, 1451
TscAI	CASTG	3 cut(s)	347, 1080, 1488
TseFI	GTSAC	4 cut(s)	73, 1223, 1313, 1541
Tsp45I	GTSAC	4 cut(s)	73, 1223, 1313, 1541
TspDTI	ATGAA	6 cut(s)	462, 522, 539, 717, 777, 1209
TspGWI	ACGGA	1 cut(s)	978
TspRI	CASTG	3 cut(s)	347, 1080, 1488
VpaK11BI	GGWCC	2 cut(s)	331, 1129
XapI	RAATTY	2 cut(s)	347, 705
XceI	RCATGY	1 cut(s)	1276
XmiI	GTMKAC	1 cut(s)	744
XmnI	GAANNNNTTC	2 cut(s)	137, 1187
XspI	CTAG	2 cut(s)	66, 207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.