pycom14g10140

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
12581063 .. 12586387
5325 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g10140.3

Sequence Viewer

Length: 1638 bp
ATGGATTTGCAAAGGCTTTGTGGGTTACTCTTTGTTTCTGCTCTGATTATTCTACTGGTATGTCGTCCGAGCTCTGTCACTGCCGGAGATATAGTGCACGATGACGATTCATCTCCGAAGAAGCCCGGGTGTGAGAACAATTTCGTTTTGGTAAAAGTTCAAACTTGGGTTGATGGAGTTGAAGCAAGTGAGTTTGTTGGTGTGGGTGCTAGATTTGGAACTACCATTGCATCAAAGGAGAAAAATGCACAACAAACTCGCCTTGTTCTTTCTGATCCTCGCGATTGTTGCAGCAAACCAAAAAAGAAGCTTGCTGGAGATGTCATCGTGGTGGACCGAGGCCACTGCAAATTCACAACTAAGGCAAATATTGCCCAAGCTGCCAATGCTTCTGCTGTCCTCATTATAAATAACCAGAAAGAACTTTACAAGATGGTGTGTGAGCCAGATGAAACTGCTCTAGATATTCAGATACCAGCAGTCATGCTCCCACATGATGCTGGTTCGACCTTGGAAAATATGCTAATGAGCAATTCATTGGTGTCTGTGCAGCTGTACTCTCCAAAGCGACCTGTAGTTGACATCGCAGAAGTATTTTTATGGTTGATGGCAGTCGGCACCATCTTGTGTGCATCCTTTTGGTCTGCATGGAGTGCCAGAGAAGCAGCTATTGAACATGAAAGGCTATTAAAGGATGCTGCTGATGAAATTCCACGTGCCAAAACTCCTCTAGGTGCTAGTGTAGTAGACATCAGCACAACATCAGCGGTCTTGTTTGTTGTTATTGCATCATGCTTCTTGGTTGTACTGTACGAGCTTATGTCATCCTGGTTTGTTGAGCTTTTGGTGGTTCTTTTCTGCATAGGTGGTGTAGAGGGATTGCAAACTTGCTTGGTTGCGTTGTTATTGAGGTGGTTCAAACGTACTGGAGAATCGTACATTAAAGTACCTATCTTGGGAGCAGTCTCACACCTAACTTTGGCTGTTTCTCCATTCTGCATAACATTTTCTGTTCTTTGGGCAGTTTATCGCAACATTTCCTTTGCCTGGATTGGTCAAGATATACTTGGAATCGCGTTGATAATCACAGTTCTTCAAATTGTTCGAATACCTAATCTGAAGGTGGGTACAGTCCTCCTCAGTTGTGCCTTCTTGTATGACATCTTTTGGGTGTTTGTTTCTAAGAAGTTATTCCATGAAAGCGTGATGATTGTGGTAGCCCGTGGCGACAAAAGTGGAGAGGATGGTATTCCAATGCTTCTAAAGATCGCACGCATGTTCGACCCATGGGGTGGTTTCAGCATCATAGGATTTGGTGACATCCTATTACCAGGCCTGCTTGTTGCATTCTCACTCAGGTATGATTGGTTGGCAAATAAGAGTCTCCGTGCTGGGTACTTCTTATGGGCGATGATTGCTTATGGATTAGGTCTTCTCATCACATACGTCGCATTAAACTTGATGGATGGGCATGGCCAACCAGCACTTCTTTACATTGTTCCATTTACACTCGGCACTTTGCTGACATTAGGTAAGAAGAGAGGTGATTTACAGATTCTGTGGTCGAGAGGAGAACCGGAAAGACCCTGCCCACATATCGAGCTTGAAGGCAGTCAAGAAGTGAACGAATCAAAGTAA

Protein Analysis

546

Amino Acids

59.84

Weight (kDa)

6.28

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 407
AccB1I GGYRCC 1 cut(s) 617
AccB7I CCANNNNNTGG 1 cut(s) 1292
AccI GTMKAC 1 cut(s) 747
AccII CGCG 2 cut(s) 282, 1076
AciI CCGC 1 cut(s) 767
AclWI GGATC 1 cut(s) 269
AcoI YGGCCR 1 cut(s) 1474
AcsI RAATTY 2 cut(s) 350, 708
AcuI CTGAAG 1 cut(s) 1139
AcvI CACGTG 1 cut(s) 716
AfaI GTAC 8 cut(s) 557, 807, 812, 925, 938, 948, 1129, 1397
AfiI CCNNNNNNNGG 4 cut(s) 956, 979, 1047, 1292
AgsI TTSAA 6 cut(s) 161, 182, 674, 919, 1097, 1607
AjnI CCWGG 3 cut(s) 827, 1046, 1330
AjuI GAANNNNNNNTTGG 2 cut(s) 1470, 1502
AluBI AGCT 8 cut(s) 72, 310, 380, 553, 668, 817, 841, 1603
AluI AGCT 8 cut(s) 72, 310, 380, 553, 668, 817, 841, 1603
Alw21I GWGCWC 2 cut(s) 74, 99
Alw26I GTCTC 2 cut(s) 970, 1388
Alw44I GTGCAC 1 cut(s) 95
AlwI GGATC 1 cut(s) 269
AlwNI CAGNNNCTG 1 cut(s) 1558
Ama87I CYCGRG 1 cut(s) 125
AoxI GGCC 3 cut(s) 340, 1333, 1474
ApaLI GTGCAC 1 cut(s) 95
ApeKI GCWGC 5 cut(s) 291, 380, 550, 665, 698
ApoI RAATTY 2 cut(s) 350, 708
Asp700I GAANNNNTTC 2 cut(s) 140, 1190
AspS9I GGNCC 1 cut(s) 334
AsuC2I CCSGG 2 cut(s) 126, 127
AsuHPI GGTGA 2 cut(s) 1328, 1556
AsuII TTCGAA 1 cut(s) 1105
AvaI CYCGRG 1 cut(s) 125
AvaII GGWCC 1 cut(s) 334
BaeGI GKGCMC 1 cut(s) 99
BalI TGGCCA 1 cut(s) 1476
BanI GGYRCC 1 cut(s) 617
BanII GRGCYC 1 cut(s) 74
BbrPI CACGTG 1 cut(s) 716
BbsI GAAGAC 1 cut(s) 1424
Bbv12I GWGCWC 2 cut(s) 74, 99
BbvI GCAGC 5 cut(s) 303, 367, 562, 677, 685
BccI CCATC 7 cut(s) 167, 427, 601, 629, 1238, 1456, 1460
BcgI CGANNNNNNTGC 2 cut(s) 327, 361
BciT130I CCWGG 3 cut(s) 829, 1048, 1332
BcnI CCSGG 2 cut(s) 126, 127
BcoDI GTCTC 2 cut(s) 970, 1388
BfaI CTAG 4 cut(s) 210, 461, 731, 738
BfmI CTRYAG 1 cut(s) 573
BisI GCNGC 5 cut(s) 292, 381, 551, 666, 699
BlsI GCNGC 5 cut(s) 293, 382, 552, 667, 700
Bme1390I CCNGG 5 cut(s) 126, 127, 829, 1048, 1332
Bme18I GGWCC 1 cut(s) 334
BmeT110I CYCGRG 1 cut(s) 125
BmgT120I GGNCC 1 cut(s) 334
BmiI GGNNCC 1 cut(s) 619
BmrFI CCNGG 5 cut(s) 126, 127, 829, 1048, 1332
BmsI GCATC 6 cut(s) 239, 487, 641, 685, 797, 1311
BpiI GAAGAC 1 cut(s) 1424
BpmI CTGGAG 2 cut(s) 336, 948
Bpu14I TTCGAA 1 cut(s) 1105
BpuMI CCSGG 2 cut(s) 126, 127
BsaAI YACGTR 1 cut(s) 716
BsaJI CCNNGG 5 cut(s) 125, 337, 510, 1222, 1286
BsaWI WCCGGW 1 cut(s) 1576
BsaXI ACNNNNNCTCC 2 cut(s) 78, 108
Bsc4I CCNNNNNNNGG 4 cut(s) 956, 979, 1047, 1292
Bse1I ACTGG 2 cut(s) 60, 931
Bse3DI GCAATG 1 cut(s) 225
BseBI CCWGG 3 cut(s) 829, 1048, 1332
BseDI CCNNGG 5 cut(s) 125, 337, 510, 1222, 1286
BseGI GGATG 6 cut(s) 632, 700, 824, 1249, 1320, 1471
BseLI CCNNNNNNNGG 4 cut(s) 956, 979, 1047, 1292
BseMI GCAATG 1 cut(s) 225
BseMII CTCAG 2 cut(s) 1153, 1369
BseNI ACTGG 2 cut(s) 60, 931
BseRI GAGGAG 3 cut(s) 717, 1127, 1584
BseSI GKGCMC 1 cut(s) 99
BseXI GCAGC 5 cut(s) 303, 367, 562, 677, 685
BseYI CCCAGC 1 cut(s) 1391
BsgI GTGCAG 1 cut(s) 569
Bsh1236I CGCG 2 cut(s) 282, 1076
BshFI GGCC 3 cut(s) 342, 1335, 1476
BshNI GGYRCC 1 cut(s) 617
BsiHKAI GWGCWC 2 cut(s) 74, 99
BsiHKCI CYCGRG 1 cut(s) 125
BsiSI CCGG 3 cut(s) 84, 126, 1577
BslI CCNNNNNNNGG 4 cut(s) 956, 979, 1047, 1292
BsmAI GTCTC 2 cut(s) 970, 1388
BsmI GAATGC 1 cut(s) 1346
BsnI GGCC 3 cut(s) 342, 1335, 1476
BsoBI CYCGRG 1 cut(s) 125
Bsp119I TTCGAA 1 cut(s) 1105
Bsp1286I GDGCHC 2 cut(s) 74, 99
Bsp143I GATC 2 cut(s) 274, 1266
Bsp19I CCATGG 1 cut(s) 1286
Bsp68I TCGCGA 1 cut(s) 282
BspACI CCGC 1 cut(s) 767
BspANI GGCC 3 cut(s) 342, 1335, 1476
BspCNI CTCAG 2 cut(s) 1152, 1368
BspFNI CGCG 2 cut(s) 282, 1076
BspLI GGNNCC 1 cut(s) 619
BspPI GGATC 1 cut(s) 269
BspT104I TTCGAA 1 cut(s) 1105
BspT107I GGYRCC 1 cut(s) 617
BsrDI GCAATG 1 cut(s) 225
BsrI ACTGG 2 cut(s) 60, 931
BssECI CCNNGG 5 cut(s) 125, 337, 510, 1222, 1286
BssMI GATC 2 cut(s) 274, 1266
BssT1I CCWWGG 2 cut(s) 510, 1286
Bst2UI CCWGG 3 cut(s) 829, 1048, 1332
Bst4CI ACNGT 3 cut(s) 810, 1090, 1132
Bst6I CTCTTC 1 cut(s) 1532
BstAPI GCANNNNNTGC 2 cut(s) 371, 653
BstBAI YACGTR 1 cut(s) 716
BstBI TTCGAA 1 cut(s) 1105
BstC8I GCNNGC 3 cut(s) 312, 1273, 1337
BstDEI CTNAG 4 cut(s) 360, 1139, 1182, 1355
BstDSI CCRYGG 2 cut(s) 1222, 1286
BstF5I GGATG 6 cut(s) 632, 700, 824, 1249, 1320, 1471
BstFNI CGCG 2 cut(s) 282, 1076
BstKTI GATC 2 cut(s) 277, 1269
BstMAI GTCTC 2 cut(s) 970, 1388
BstMBI GATC 2 cut(s) 274, 1266
BstMWI GCNNNNNNNGC 7 cut(s) 288, 371, 380, 386, 653, 662, 1415
BstNI CCWGG 3 cut(s) 829, 1048, 1332
BstNSI RCATGY 1 cut(s) 1279
BstSCI CCNGG 5 cut(s) 124, 125, 827, 1046, 1330
BstSFI CTRYAG 1 cut(s) 573
BstSLI GKGCMC 1 cut(s) 99
BstUI CGCG 2 cut(s) 282, 1076
BstV1I GCAGC 5 cut(s) 303, 367, 562, 677, 685
BstV2I GAAGAC 1 cut(s) 1424
BsuRI GGCC 3 cut(s) 342, 1335, 1476
BtgI CCRYGG 2 cut(s) 1222, 1286
BtgZI GCGATG 2 cut(s) 568, 1424
BtsCI GGATG 6 cut(s) 632, 700, 824, 1249, 1320, 1471
BtsI GCAGTG 2 cut(s) 78, 343
BtsIMutI CAGTG 2 cut(s) 78, 343
BtuMI TCGCGA 1 cut(s) 282
Cac8I GCNNGC 3 cut(s) 312, 1273, 1337
CaiI CAGNNNCTG 1 cut(s) 1558
Cfr13I GGNCC 1 cut(s) 334
Cfr9I CCCGGG 1 cut(s) 125
Csp6I GTAC 8 cut(s) 556, 806, 811, 924, 937, 947, 1128, 1396
CviAII CATG 9 cut(s) 484, 494, 648, 677, 792, 1196, 1276, 1287, 1472
CviQI GTAC 8 cut(s) 556, 806, 811, 924, 937, 947, 1128, 1396
DdeI CTNAG 4 cut(s) 360, 1139, 1182, 1355
DpnI GATC 2 cut(s) 276, 1268
DpnII GATC 2 cut(s) 274, 1266
EaeI YGGCCR 1 cut(s) 1474
Eam1104I CTCTTC 1 cut(s) 1532
EarI CTCTTC 1 cut(s) 1532
Ecl136II GAGCTC 1 cut(s) 72
Eco130I CCWWGG 2 cut(s) 510, 1286
Eco147I AGGCCT 1 cut(s) 1335
Eco24I GRGCYC 1 cut(s) 74
Eco47I GGWCC 1 cut(s) 334
Eco53kI GAGCTC 1 cut(s) 72
Eco57I CTGAAG 1 cut(s) 1139
Eco72I CACGTG 1 cut(s) 716
Eco88I CYCGRG 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 72
EcoRII CCWGG 3 cut(s) 827, 1046, 1330
EcoT14I CCWWGG 2 cut(s) 510, 1286
EcoT38I GRGCYC 1 cut(s) 74
ErhI CCWWGG 2 cut(s) 510, 1286
FaeI CATG 9 cut(s) 487, 497, 651, 680, 795, 1199, 1279, 1290, 1475
FalI AAGNNNNNCTT 2 cut(s) 1050, 1082
FatI CATG 9 cut(s) 483, 493, 647, 676, 791, 1195, 1275, 1286, 1471
FblI GTMKAC 1 cut(s) 747
Fnu4HI GCNGC 5 cut(s) 292, 381, 551, 666, 699
FokI GGATG 6 cut(s) 619, 707, 811, 1256, 1307, 1478
FriOI GRGCYC 1 cut(s) 74
Fsp4HI GCNGC 5 cut(s) 292, 381, 551, 666, 699
FspBI CTAG 4 cut(s) 210, 461, 731, 738
GluI GCNGC 5 cut(s) 292, 381, 551, 666, 699
GsaI CCCAGC 1 cut(s) 1395
GsuI CTGGAG 2 cut(s) 336, 948
HaeIII GGCC 3 cut(s) 342, 1335, 1476
HapII CCGG 3 cut(s) 84, 126, 1577
Hin1II CATG 9 cut(s) 487, 497, 651, 680, 795, 1199, 1279, 1290, 1475
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 6 cut(s) 107, 932, 1071, 1381, 1555, 1628
HpaII CCGG 3 cut(s) 84, 126, 1577
HphI GGTGA 2 cut(s) 1328, 1556
Hpy166II GTNNAC 5 cut(s) 97, 334, 580, 748, 1624
Hpy188I TCNGA 6 cut(s) 45, 69, 117, 274, 471, 1119
Hpy188III TCNNGA 5 cut(s) 281, 461, 1058, 1566, 1616
Hpy8I GTNNAC 5 cut(s) 97, 334, 580, 748, 1624
Hpy99I CGWCG 1 cut(s) 1451
HpyAV CCTTC 3 cut(s) 1114, 1159, 1601
HpyCH4III ACNGT 3 cut(s) 810, 1090, 1132
HpyCH4IV ACGT 3 cut(s) 715, 922, 1446
HpyF10VI GCNNNNNNNGC 7 cut(s) 288, 371, 380, 386, 653, 662, 1415
HpyF3I CTNAG 4 cut(s) 360, 1139, 1182, 1355
HpySE526I ACGT 3 cut(s) 715, 922, 1446
Hsp92II CATG 9 cut(s) 487, 497, 651, 680, 795, 1199, 1279, 1290, 1475
Kzo9I GATC 2 cut(s) 274, 1266
LmnI GCTCC 2 cut(s) 492, 959
Lsp1109I GCAGC 5 cut(s) 303, 367, 562, 677, 685
LweI GCATC 6 cut(s) 239, 487, 641, 685, 797, 1311
MaeI CTAG 4 cut(s) 210, 461, 731, 738
MaeII ACGT 3 cut(s) 715, 922, 1446
MaeIII GTNAC 3 cut(s) 24, 76, 1316
MalI GATC 2 cut(s) 276, 1268
MboI GATC 2 cut(s) 274, 1266
MboII GAAGA 4 cut(s) 130, 1085, 1424, 1549
MhlI GDGCHC 2 cut(s) 74, 99
MlsI TGGCCA 1 cut(s) 1476
MluCI AATT 5 cut(s) 139, 350, 532, 708, 1098
MluNI TGGCCA 1 cut(s) 1476
MlyI GAGTC 1 cut(s) 1390
Mox20I TGGCCA 1 cut(s) 1476
MroXI GAANNNNTTC 2 cut(s) 140, 1190
MscI TGGCCA 1 cut(s) 1476
MseI TTAA 3 cut(s) 689, 942, 1454
MslI CAYNNNNRTG 1 cut(s) 329
Msp20I TGGCCA 1 cut(s) 1476
MspA1I CMGCKG 2 cut(s) 553, 767
MspI CCGG 3 cut(s) 84, 126, 1577
MspR9I CCNGG 5 cut(s) 126, 127, 829, 1048, 1332
Mva1269I GAATGC 1 cut(s) 1346
MvaI CCWGG 3 cut(s) 829, 1048, 1332
MvnI CGCG 2 cut(s) 282, 1076
MwoI GCNNNNNNNGC 7 cut(s) 288, 371, 380, 386, 653, 662, 1415
NciI CCSGG 2 cut(s) 126, 127
NcoI CCATGG 1 cut(s) 1286
NdeII GATC 2 cut(s) 274, 1266
NlaIII CATG 9 cut(s) 487, 497, 651, 680, 795, 1199, 1279, 1290, 1475
NlaIV GGNNCC 1 cut(s) 619
NmeAIII GCCGAG 1 cut(s) 1491
NmuCI GTSAC 2 cut(s) 76, 1316
NruI TCGCGA 1 cut(s) 282
NspI RCATGY 1 cut(s) 1279
NspV TTCGAA 1 cut(s) 1105
PceI AGGCCT 1 cut(s) 1335
PctI GAATGC 1 cut(s) 1346
PdmI GAANNNNTTC 2 cut(s) 140, 1190
PfeI GAWTC 5 cut(s) 107, 932, 1071, 1555, 1628
PflMI CCANNNNNTGG 1 cut(s) 1292
PkrI GCNGC 5 cut(s) 293, 382, 552, 667, 700
PleI GAGTC 1 cut(s) 1389
PmaCI CACGTG 1 cut(s) 716
PmlI CACGTG 1 cut(s) 716
PpsI GAGTC 1 cut(s) 1389
Ppu21I YACGTR 1 cut(s) 716
PsiI TTATAA 1 cut(s) 407
Psp124BI GAGCTC 1 cut(s) 74
Psp6I CCWGG 3 cut(s) 827, 1046, 1330
PspCI CACGTG 1 cut(s) 716
PspFI CCCAGC 1 cut(s) 1391
PspGI CCWGG 3 cut(s) 827, 1046, 1330
PspN4I GGNNCC 1 cut(s) 619
PspPI GGNCC 1 cut(s) 334
PstNI CAGNNNCTG 1 cut(s) 1558
PvuII CAGCTG 1 cut(s) 553
RruI TCGCGA 1 cut(s) 282
RsaI GTAC 8 cut(s) 557, 807, 812, 925, 938, 948, 1129, 1397
RsaNI GTAC 8 cut(s) 556, 806, 811, 924, 937, 947, 1128, 1396
RseI CAYNNNNRTG 1 cut(s) 329
SacI GAGCTC 1 cut(s) 74
SaqAI TTAA 3 cut(s) 689, 942, 1454
SatI GCNGC 5 cut(s) 292, 381, 551, 666, 699
Sau3AI GATC 2 cut(s) 274, 1266
Sau96I GGNCC 1 cut(s) 334
SchI GAGTC 1 cut(s) 1390
ScrFI CCNGG 5 cut(s) 126, 127, 829, 1048, 1332
SduI GDGCHC 2 cut(s) 74, 99
SfaNI GCATC 6 cut(s) 239, 487, 641, 685, 797, 1311
SfcI CTRYAG 1 cut(s) 573
SfuI TTCGAA 1 cut(s) 1105
SinI GGWCC 1 cut(s) 334
SmaI CCCGGG 1 cut(s) 127
SmiMI CAYNNNNRTG 1 cut(s) 329
Sse9I AATT 5 cut(s) 139, 350, 532, 708, 1098
SseBI AGGCCT 1 cut(s) 1335
SsiI CCGC 1 cut(s) 767
SspI AATATT 1 cut(s) 370
SspMI CTAG 4 cut(s) 210, 461, 731, 738
SstI GAGCTC 1 cut(s) 74
StuI AGGCCT 1 cut(s) 1335
StyD4I CCNGG 5 cut(s) 124, 125, 827, 1046, 1330
StyI CCWWGG 2 cut(s) 510, 1286
TaaI ACNGT 3 cut(s) 810, 1090, 1132
TaiI ACGT 3 cut(s) 718, 925, 1449
TaqI TCGA 5 cut(s) 506, 1105, 1281, 1565, 1599
TaqII GACCGA 1 cut(s) 351
TasI AATT 5 cut(s) 139, 350, 532, 708, 1098
TatI WGTACW 2 cut(s) 555, 805
TfiI GAWTC 5 cut(s) 107, 932, 1071, 1555, 1628
Tru1I TTAA 3 cut(s) 689, 942, 1454
Tru9I TTAA 3 cut(s) 689, 942, 1454
TscAI CASTG 2 cut(s) 85, 350
TseFI GTSAC 2 cut(s) 76, 1316
TseI GCWGC 5 cut(s) 291, 380, 550, 665, 698
Tsp45I GTSAC 2 cut(s) 76, 1316
TspDTI ATGAA 6 cut(s) 99, 465, 525, 693, 720, 1212
TspGWI ACGGA 1 cut(s) 1376
TspMI CCCGGG 1 cut(s) 125
TspRI CASTG 2 cut(s) 85, 350
Van91I CCANNNNNTGG 1 cut(s) 1292
VneI GTGCAC 1 cut(s) 95
VpaK11BI GGWCC 1 cut(s) 334
XapI RAATTY 2 cut(s) 350, 708
XbaI TCTAGA 1 cut(s) 460
XceI RCATGY 1 cut(s) 1279
XmaI CCCGGG 1 cut(s) 125
XmiI GTMKAC 1 cut(s) 747
XmnI GAANNNNTTC 2 cut(s) 140, 1190
XspI CTAG 4 cut(s) 210, 461, 731, 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.