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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g04390 |
| malus_domestica | MD14G1123200.v1.1 |
| prunus_persica | Prupe.5G117100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0195171 |
| rosa_laevigata | RLG00000004140 |
| rosa_roxburghii | Rroxscaffold_3G00260700 |
| rosa_samantha | Rh7AG148700 Rh7CG153300 Rh7DG149800 |
| rosa_wichuraiana | Rw7G012680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 523 |
| AcsI | RAATTY | 1 cut(s) | 516 |
| AcuI | CTGAAG | 1 cut(s) | 482 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 450 |
| AgsI | TTSAA | 2 cut(s) | 37, 214 |
| AjiI | CACGTC | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 173, 188 |
| AluI | AGCT | 2 cut(s) | 173, 188 |
| Alw21I | GWGCWC | 1 cut(s) | 175 |
| AoxI | GGCC | 3 cut(s) | 240, 289, 523 |
| ApoI | RAATTY | 1 cut(s) | 516 |
| AspLEI | GCGC | 1 cut(s) | 462 |
| AspS9I | GGNCC | 1 cut(s) | 289 |
| AsuHPI | GGTGA | 2 cut(s) | 323, 467 |
| BalI | TGGCCA | 1 cut(s) | 525 |
| BanII | GRGCYC | 2 cut(s) | 175, 284 |
| Bbv12I | GWGCWC | 1 cut(s) | 175 |
| BccI | CCATC | 1 cut(s) | 506 |
| BfaI | CTAG | 1 cut(s) | 369 |
| BglII | AGATCT | 1 cut(s) | 139 |
| BmgBI | CACGTC | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 289 |
| BmiI | GGNNCC | 2 cut(s) | 107, 442 |
| BpuEI | CTTGAG | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 2 cut(s) | 273, 334 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 450 |
| Bse1I | ACTGG | 1 cut(s) | 442 |
| BseDI | CCNNGG | 2 cut(s) | 273, 334 |
| BseGI | GGATG | 1 cut(s) | 517 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 450 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 442 |
| BseYI | CCCAGC | 1 cut(s) | 394 |
| BshFI | GGCC | 3 cut(s) | 242, 291, 525 |
| BsiHKAI | GWGCWC | 1 cut(s) | 175 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 450 |
| BsnI | GGCC | 3 cut(s) | 242, 291, 525 |
| Bsp1286I | GDGCHC | 2 cut(s) | 175, 284 |
| Bsp143I | GATC | 3 cut(s) | 123, 139, 504 |
| Bsp19I | CCATGG | 1 cut(s) | 334 |
| BspANI | GGCC | 3 cut(s) | 242, 291, 525 |
| BspCNI | CTCAG | 1 cut(s) | 295 |
| BspLI | GGNNCC | 2 cut(s) | 107, 442 |
| BsrI | ACTGG | 1 cut(s) | 442 |
| BssECI | CCNNGG | 2 cut(s) | 273, 334 |
| BssMI | GATC | 3 cut(s) | 123, 139, 504 |
| BssT1I | CCWWGG | 2 cut(s) | 273, 334 |
| Bst4CI | ACNGT | 1 cut(s) | 560 |
| Bst6I | CTCTTC | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 2 cut(s) | 267, 313 |
| BstDEI | CTNAG | 3 cut(s) | 184, 303, 385 |
| BstDSI | CCRYGG | 1 cut(s) | 334 |
| BstEII | GGTNACC | 1 cut(s) | 329 |
| BstF5I | GGATG | 1 cut(s) | 517 |
| BstHHI | GCGC | 1 cut(s) | 462 |
| BstKTI | GATC | 3 cut(s) | 126, 142, 507 |
| BstMBI | GATC | 3 cut(s) | 123, 139, 504 |
| BstPI | GGTNACC | 1 cut(s) | 329 |
| BstX2I | RGATCY | 1 cut(s) | 139 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 437 |
| BstYI | RGATCY | 1 cut(s) | 139 |
| BsuRI | GGCC | 3 cut(s) | 242, 291, 525 |
| BtgI | CCRYGG | 1 cut(s) | 334 |
| BtrI | CACGTC | 1 cut(s) | 47 |
| BtsCI | GGATG | 1 cut(s) | 517 |
| BtsIMutI | CAGTG | 2 cut(s) | 111, 565 |
| Cac8I | GCNNGC | 2 cut(s) | 267, 313 |
| CfoI | GCGC | 1 cut(s) | 462 |
| Cfr13I | GGNCC | 1 cut(s) | 289 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 460, 495 |
| CviAII | CATG | 3 cut(s) | 335, 413, 431 |
| DdeI | CTNAG | 3 cut(s) | 184, 303, 385 |
| DpnI | GATC | 3 cut(s) | 125, 141, 506 |
| DpnII | GATC | 3 cut(s) | 123, 139, 504 |
| EaeI | YGGCCR | 1 cut(s) | 523 |
| Eam1104I | CTCTTC | 1 cut(s) | 443 |
| EarI | CTCTTC | 1 cut(s) | 443 |
| Ecl136II | GAGCTC | 1 cut(s) | 173 |
| Eco130I | CCWWGG | 2 cut(s) | 273, 334 |
| Eco24I | GRGCYC | 2 cut(s) | 175, 284 |
| Eco53kI | GAGCTC | 1 cut(s) | 173 |
| Eco57I | CTGAAG | 1 cut(s) | 482 |
| Eco91I | GGTNACC | 1 cut(s) | 329 |
| EcoICRI | GAGCTC | 1 cut(s) | 173 |
| EcoO65I | GGTNACC | 1 cut(s) | 329 |
| EcoT14I | CCWWGG | 2 cut(s) | 273, 334 |
| EcoT38I | GRGCYC | 2 cut(s) | 175, 284 |
| ErhI | CCWWGG | 2 cut(s) | 273, 334 |
| FaeI | CATG | 3 cut(s) | 338, 416, 434 |
| FatI | CATG | 3 cut(s) | 334, 412, 430 |
| FokI | GGATG | 1 cut(s) | 524 |
| FriOI | GRGCYC | 2 cut(s) | 175, 284 |
| FspBI | CTAG | 1 cut(s) | 369 |
| GlaI | GCGC | 1 cut(s) | 461 |
| GsaI | CCCAGC | 1 cut(s) | 398 |
| HaeIII | GGCC | 3 cut(s) | 242, 291, 525 |
| HhaI | GCGC | 1 cut(s) | 462 |
| Hin1II | CATG | 3 cut(s) | 338, 416, 434 |
| Hin6I | GCGC | 1 cut(s) | 460 |
| HinP1I | GCGC | 1 cut(s) | 460 |
| HincII | GTYRAC | 1 cut(s) | 231 |
| HindII | GTYRAC | 1 cut(s) | 231 |
| HinfI | GANTC | 1 cut(s) | 65 |
| HpaI | GTTAAC | 1 cut(s) | 231 |
| HphI | GGTGA | 2 cut(s) | 323, 467 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 3 cut(s) | 304, 321, 501 |
| Hpy188III | TCNNGA | 1 cut(s) | 176 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| HpyAV | CCTTC | 3 cut(s) | 165, 506, 563 |
| HpyCH4III | ACNGT | 1 cut(s) | 560 |
| HpyCH4IV | ACGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 44, 434 |
| HpyF3I | CTNAG | 3 cut(s) | 184, 303, 385 |
| HpySE526I | ACGT | 1 cut(s) | 46 |
| Hsp92II | CATG | 3 cut(s) | 338, 416, 434 |
| HspAI | GCGC | 1 cut(s) | 460 |
| KspAI | GTTAAC | 1 cut(s) | 231 |
| Kzo9I | GATC | 3 cut(s) | 123, 139, 504 |
| LpnPI | CCDG | 7 cut(s) | 279, 297, 408, 423, 437, 462, 507 |
| MaeI | CTAG | 1 cut(s) | 369 |
| MaeII | ACGT | 1 cut(s) | 46 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 3 cut(s) | 125, 141, 506 |
| MboI | GATC | 3 cut(s) | 123, 139, 504 |
| MboII | GAAGA | 2 cut(s) | 460, 514 |
| MflI | RGATCY | 1 cut(s) | 139 |
| MhlI | GDGCHC | 2 cut(s) | 175, 284 |
| MlsI | TGGCCA | 1 cut(s) | 525 |
| MluCI | AATT | 2 cut(s) | 37, 516 |
| MluNI | TGGCCA | 1 cut(s) | 525 |
| MnlI | CCTC | 4 cut(s) | 253, 271, 320, 444 |
| Mox20I | TGGCCA | 1 cut(s) | 525 |
| MscI | TGGCCA | 1 cut(s) | 525 |
| MseI | TTAA | 1 cut(s) | 230 |
| MslI | CAYNNNNRTG | 1 cut(s) | 24 |
| Msp20I | TGGCCA | 1 cut(s) | 525 |
| NcoI | CCATGG | 1 cut(s) | 334 |
| NdeII | GATC | 3 cut(s) | 123, 139, 504 |
| NlaIII | CATG | 3 cut(s) | 338, 416, 434 |
| NlaIV | GGNNCC | 2 cut(s) | 107, 442 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| Psp124BI | GAGCTC | 1 cut(s) | 175 |
| PspEI | GGTNACC | 1 cut(s) | 329 |
| PspFI | CCCAGC | 1 cut(s) | 394 |
| PspN4I | GGNNCC | 2 cut(s) | 107, 442 |
| PspPI | GGNCC | 1 cut(s) | 289 |
| PsuI | RGATCY | 1 cut(s) | 139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 24 |
| SacI | GAGCTC | 1 cut(s) | 175 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| Sau3AI | GATC | 3 cut(s) | 123, 139, 504 |
| Sau96I | GGNCC | 1 cut(s) | 289 |
| SduI | GDGCHC | 2 cut(s) | 175, 284 |
| SetI | ASST | 7 cut(s) | 16, 49, 175, 190, 300, 331, 481 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 24 |
| SmlI | CTYRAG | 1 cut(s) | 174 |
| SmoI | CTYRAG | 1 cut(s) | 174 |
| Sse9I | AATT | 2 cut(s) | 37, 516 |
| SspMI | CTAG | 1 cut(s) | 369 |
| SstI | GAGCTC | 1 cut(s) | 175 |
| StyI | CCWWGG | 2 cut(s) | 273, 334 |
| TaaI | ACNGT | 1 cut(s) | 560 |
| TaiI | ACGT | 1 cut(s) | 49 |
| TasI | AATT | 2 cut(s) | 37, 516 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TscAI | CASTG | 2 cut(s) | 118, 565 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 1 cut(s) | 582 |
| TspRI | CASTG | 2 cut(s) | 118, 565 |
| XapI | RAATTY | 1 cut(s) | 516 |
| XspI | CTAG | 1 cut(s) | 369 |