Cytochrome p450
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46660 AT3G61880 AT3G61880 |
| fragaria_vesca | FvH4_5g10880 FvH4_7g17300 |
| malus_domestica | MD00G1036100.v1.1 MD00G1204600.v1.1 MD06G1119300.v1.1 |
| prunus_persica | Prupe.2G194200_v2.0.a1 Prupe.5G129900_v2.0.a1 |
| pyrus_communis | pycom01g11000 pycom06g11030 pycom07g15270 |
| rosa_chinensis | RchiOBHm_Chr1g0360721 RchiOBHm_Chr7g0186981 |
| rosa_laevigata | RLG00000004804 RLG00000027790 |
| rosa_multiflora | Rmu_sc0001758.1_g000058 Rmu_ssc0000022.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00295900 |
| rosa_rugosa | Rorug01G0281200 Rorug06G0478400 |
| rosa_samantha | Rh1AG293200 Rh1BG257600 Rh1CG275500 Rh1DG287700 Rh7AG084000 Rh7BG078900 Rh7CG085100 |
| rosa_wichuraiana | Rw1G025930 Rw7G007390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 168, 1429 |
| AccII | CGCG | 1 cut(s) | 654 |
| AccIII | TCCGGA | 1 cut(s) | 663 |
| AciI | CCGC | 9 cut(s) | 102, 119, 540, 570, 652, 754, 1043, 1237, 1283 |
| AclWI | GGATC | 3 cut(s) | 409, 1138, 1420 |
| AcoI | YGGCCR | 5 cut(s) | 99, 120, 889, 922, 1136 |
| AcuI | CTGAAG | 3 cut(s) | 818, 891, 1350 |
| AcvI | CACGTG | 3 cut(s) | 257, 629, 1276 |
| AcyI | GRCGYC | 1 cut(s) | 1430 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 248, 272, 1099, 1231, 1465 |
| AflIII | ACRYGT | 2 cut(s) | 374, 1305 |
| AgeI | ACCGGT | 1 cut(s) | 879 |
| AgsI | TTSAA | 5 cut(s) | 209, 478, 679, 902, 1357 |
| AjiI | CACGTC | 1 cut(s) | 1393 |
| AjnI | CCWGG | 2 cut(s) | 1229, 1319 |
| AleI | CACNNNNGTG | 1 cut(s) | 1259 |
| Alw21I | GWGCWC | 6 cut(s) | 333, 695, 916, 1107, 1116, 1572 |
| Alw26I | GTCTC | 3 cut(s) | 365, 731, 1245 |
| Alw44I | GTGCAC | 1 cut(s) | 1103 |
| AlwI | GGATC | 3 cut(s) | 409, 1138, 1420 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 645, 1037 |
| Ama87I | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| Aor13HI | TCCGGA | 1 cut(s) | 663 |
| ApaI | GGGCCC | 2 cut(s) | 1220, 1237 |
| ApaLI | GTGCAC | 1 cut(s) | 1103 |
| ApeKI | GCWGC | 4 cut(s) | 276, 323, 1455, 1510 |
| AsiGI | ACCGGT | 1 cut(s) | 879 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 641 |
| AspLEI | GCGC | 2 cut(s) | 539, 1432 |
| AsuC2I | CCSGG | 7 cut(s) | 147, 249, 250, 1215, 1461, 1462, 1550 |
| AsuHPI | GGTGA | 7 cut(s) | 307, 380, 460, 1309, 1312, 1480, 1594 |
| AsuII | TTCGAA | 1 cut(s) | 591 |
| AvaI | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| AvaII | GGWCC | 8 cut(s) | 745, 829, 968, 1287, 1324, 1342, 1503, 1555 |
| AxyI | CCTNAGG | 2 cut(s) | 749, 1199 |
| BaeGI | GKGCMC | 5 cut(s) | 523, 1107, 1220, 1237, 1448 |
| BanI | GGYRCC | 2 cut(s) | 168, 1429 |
| BanII | GRGCYC | 7 cut(s) | 333, 471, 725, 916, 1116, 1220, 1237 |
| BauI | CACGAG | 3 cut(s) | 758, 1106, 1447 |
| BbrPI | CACGTG | 3 cut(s) | 257, 629, 1276 |
| BbsI | GAAGAC | 3 cut(s) | 57, 118, 424 |
| Bbv12I | GWGCWC | 6 cut(s) | 333, 695, 916, 1107, 1116, 1572 |
| BbvI | GCAGC | 4 cut(s) | 288, 335, 1442, 1497 |
| BccI | CCATC | 6 cut(s) | 346, 959, 1066, 1168, 1253, 1259 |
| BceAI | ACGGC | 4 cut(s) | 107, 1123, 1151, 1417 |
| BciT130I | CCWGG | 2 cut(s) | 1231, 1321 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BcnI | CCSGG | 7 cut(s) | 147, 249, 250, 1215, 1461, 1462, 1550 |
| BcoDI | GTCTC | 3 cut(s) | 365, 731, 1245 |
| BfaI | CTAG | 3 cut(s) | 113, 299, 849 |
| BfoI | RGCGCY | 1 cut(s) | 1433 |
| BisI | GCNGC | 8 cut(s) | 102, 120, 277, 324, 540, 755, 1456, 1511 |
| BlpI | GCTNAGC | 1 cut(s) | 327 |
| BlsI | GCNGC | 8 cut(s) | 103, 121, 278, 325, 541, 756, 1457, 1512 |
| Bme1390I | CCNGG | 9 cut(s) | 147, 249, 250, 1215, 1231, 1321, 1461, 1462, 1550 |
| Bme18I | GGWCC | 8 cut(s) | 745, 829, 968, 1287, 1324, 1342, 1503, 1555 |
| BmeT110I | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| BmgBI | CACGTC | 1 cut(s) | 1393 |
| BmiI | GGNNCC | 9 cut(s) | 170, 1218, 1235, 1288, 1325, 1326, 1344, 1431, 1504 |
| BmrFI | CCNGG | 9 cut(s) | 147, 249, 250, 1215, 1231, 1321, 1461, 1462, 1550 |
| BmrI | ACTGGG | 1 cut(s) | 142 |
| BmsI | GCATC | 6 cut(s) | 540, 589, 842, 1194, 1375, 1546 |
| BmuI | ACTGGG | 1 cut(s) | 142 |
| BoxI | GACNNNNGTC | 2 cut(s) | 743, 1484 |
| BpiI | GAAGAC | 3 cut(s) | 57, 118, 424 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 707, 739 |
| BpmI | CTGGAG | 1 cut(s) | 214 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1571 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 327 |
| Bpu14I | TTCGAA | 1 cut(s) | 591 |
| BpuMI | CCSGG | 7 cut(s) | 147, 249, 250, 1215, 1461, 1462, 1550 |
| BsaAI | YACGTR | 3 cut(s) | 257, 629, 1276 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1269 |
| BsaHI | GRCGYC | 1 cut(s) | 1430 |
| BsaJI | CCNNGG | 9 cut(s) | 248, 408, 812, 1230, 1320, 1380, 1459, 1460, 1482 |
| BsaWI | WCCGGW | 4 cut(s) | 445, 663, 843, 879 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 536, 566 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 248, 272, 1099, 1231, 1465 |
| Bse118I | RCCGGY | 3 cut(s) | 821, 879, 920 |
| Bse1I | ACTGG | 4 cut(s) | 137, 179, 518, 800 |
| Bse21I | CCTNAGG | 2 cut(s) | 749, 1199 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1269 |
| BseAI | TCCGGA | 1 cut(s) | 663 |
| BseBI | CCWGG | 2 cut(s) | 1231, 1321 |
| BseDI | CCNNGG | 9 cut(s) | 248, 408, 812, 1230, 1320, 1380, 1459, 1460, 1482 |
| BseGI | GGATG | 5 cut(s) | 1077, 1209, 1270, 1390, 1537 |
| BseJI | GATNNNNATC | 1 cut(s) | 1269 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 248, 272, 1099, 1231, 1465 |
| BseMII | CTCAG | 6 cut(s) | 23, 318, 538, 740, 1190, 1585 |
| BseNI | ACTGG | 4 cut(s) | 137, 179, 518, 800 |
| BseRI | GAGGAG | 2 cut(s) | 1041, 1124 |
| BseSI | GKGCMC | 5 cut(s) | 523, 1107, 1220, 1237, 1448 |
| BseX3I | CGGCCG | 4 cut(s) | 120, 889, 922, 1136 |
| BseXI | GCAGC | 4 cut(s) | 288, 335, 1442, 1497 |
| BseYI | CCCAGC | 1 cut(s) | 718 |
| BsgI | GTGCAG | 2 cut(s) | 609, 1415 |
| Bsh1236I | CGCG | 1 cut(s) | 654 |
| Bsh1285I | CGRYCG | 5 cut(s) | 123, 892, 925, 1120, 1139 |
| BshNI | GGYRCC | 2 cut(s) | 168, 1429 |
| BshTI | ACCGGT | 1 cut(s) | 879 |
| BsiEI | CGRYCG | 5 cut(s) | 123, 892, 925, 1120, 1139 |
| BsiHKAI | GWGCWC | 6 cut(s) | 333, 695, 916, 1107, 1116, 1572 |
| BsiHKCI | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| BslFI | GGGAC | 3 cut(s) | 411, 1300, 1337 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 248, 272, 1099, 1231, 1465 |
| BsmAI | GTCTC | 3 cut(s) | 365, 731, 1245 |
| BsmFI | GGGAC | 3 cut(s) | 411, 1300, 1337 |
| BsoBI | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| Bsp119I | TTCGAA | 1 cut(s) | 591 |
| Bsp120I | GGGCCC | 2 cut(s) | 1216, 1233 |
| Bsp13I | TCCGGA | 1 cut(s) | 663 |
| Bsp143I | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 327 |
| Bsp19I | CCATGG | 1 cut(s) | 812 |
| BspACI | CCGC | 9 cut(s) | 102, 119, 540, 570, 652, 754, 1043, 1237, 1283 |
| BspCNI | CTCAG | 6 cut(s) | 22, 319, 537, 741, 1191, 1584 |
| BspEI | TCCGGA | 1 cut(s) | 663 |
| BspFNI | CGCG | 1 cut(s) | 654 |
| BspHI | TCATGA | 1 cut(s) | 288 |
| BspLI | GGNNCC | 9 cut(s) | 170, 1218, 1235, 1288, 1325, 1326, 1344, 1431, 1504 |
| BspPI | GGATC | 3 cut(s) | 409, 1138, 1420 |
| BspQI | GCTCTTC | 1 cut(s) | 338 |
| BspT104I | TTCGAA | 1 cut(s) | 591 |
| BspT107I | GGYRCC | 2 cut(s) | 168, 1429 |
| BsrFI | RCCGGY | 3 cut(s) | 821, 879, 920 |
| BsrI | ACTGG | 4 cut(s) | 137, 179, 518, 800 |
| BssAI | RCCGGY | 3 cut(s) | 821, 879, 920 |
| BssECI | CCNNGG | 9 cut(s) | 248, 408, 812, 1230, 1320, 1380, 1459, 1460, 1482 |
| BssMI | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| BssNI | GRCGYC | 1 cut(s) | 1430 |
| BssSI | CACGAG | 3 cut(s) | 758, 1106, 1447 |
| BssT1I | CCWWGG | 3 cut(s) | 408, 812, 1380 |
| Bst2BI | CACGAG | 3 cut(s) | 758, 1106, 1447 |
| Bst2UI | CCWGG | 2 cut(s) | 1231, 1321 |
| Bst4CI | ACNGT | 7 cut(s) | 425, 588, 1039, 1258, 1486, 1606, 1619 |
| Bst6I | CTCTTC | 6 cut(s) | 47, 98, 198, 338, 554, 729 |
| BstACI | GRCGYC | 1 cut(s) | 1430 |
| BstBAI | YACGTR | 3 cut(s) | 257, 629, 1276 |
| BstBI | TTCGAA | 1 cut(s) | 591 |
| BstC8I | GCNNGC | 5 cut(s) | 519, 819, 1179, 1237, 1281 |
| BstDEI | CTNAG | 6 cut(s) | 9, 327, 524, 749, 1199, 1571 |
| BstDSI | CCRYGG | 2 cut(s) | 812, 1482 |
| BstEII | GGTNACC | 1 cut(s) | 1486 |
| BstF5I | GGATG | 5 cut(s) | 1077, 1209, 1270, 1390, 1537 |
| BstFNI | CGCG | 1 cut(s) | 654 |
| BstH2I | RGCGCY | 1 cut(s) | 1433 |
| BstHHI | GCGC | 2 cut(s) | 539, 1432 |
| BstKTI | GATC | 7 cut(s) | 19, 417, 621, 1053, 1120, 1133, 1415 |
| BstMAI | GTCTC | 3 cut(s) | 365, 731, 1245 |
| BstMBI | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| BstMCI | CGRYCG | 5 cut(s) | 123, 892, 925, 1120, 1139 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 282, 1111, 1452 |
| BstNI | CCWGG | 2 cut(s) | 1231, 1321 |
| BstNSI | RCATGY | 2 cut(s) | 393, 1309 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 743, 1484 |
| BstPI | GGTNACC | 1 cut(s) | 1486 |
| BstSCI | CCNGG | 9 cut(s) | 145, 247, 248, 1213, 1229, 1319, 1459, 1460, 1548 |
| BstSLI | GKGCMC | 5 cut(s) | 523, 1107, 1220, 1237, 1448 |
| BstUI | CGCG | 1 cut(s) | 654 |
| BstV1I | GCAGC | 4 cut(s) | 288, 335, 1442, 1497 |
| BstV2I | GAAGAC | 3 cut(s) | 57, 118, 424 |
| BstX2I | RGATCY | 2 cut(s) | 414, 1412 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1297 |
| BstYI | RGATCY | 2 cut(s) | 414, 1412 |
| BstZI | CGGCCG | 4 cut(s) | 120, 889, 922, 1136 |
| Bsu36I | CCTNAGG | 2 cut(s) | 749, 1199 |
| BtgI | CCRYGG | 2 cut(s) | 812, 1482 |
| BtrI | CACGTC | 1 cut(s) | 1393 |
| BtsCI | GGATG | 5 cut(s) | 1077, 1209, 1270, 1390, 1537 |
| BtsI | GCAGTG | 2 cut(s) | 69, 1188 |
| BtsIMutI | CAGTG | 4 cut(s) | 69, 172, 1035, 1188 |
| Cac8I | GCNNGC | 5 cut(s) | 519, 819, 1179, 1237, 1281 |
| CaiI | CAGNNNCTG | 2 cut(s) | 645, 1037 |
| CciI | TCATGA | 1 cut(s) | 288 |
| CfoI | GCGC | 2 cut(s) | 539, 1432 |
| Cfr10I | RCCGGY | 3 cut(s) | 821, 879, 920 |
| Cfr9I | CCCGGG | 2 cut(s) | 248, 1460 |
| CseI | GACGC | 3 cut(s) | 537, 637, 829 |
| CspAI | ACCGGT | 1 cut(s) | 879 |
| DdeI | CTNAG | 6 cut(s) | 9, 327, 524, 749, 1199, 1571 |
| DinI | GGCGCC | 1 cut(s) | 1431 |
| DpnI | GATC | 7 cut(s) | 18, 416, 620, 1052, 1119, 1132, 1414 |
| DpnII | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| EaeI | YGGCCR | 5 cut(s) | 99, 120, 889, 922, 1136 |
| EagI | CGGCCG | 4 cut(s) | 120, 889, 922, 1136 |
| Eam1104I | CTCTTC | 6 cut(s) | 47, 98, 198, 338, 554, 729 |
| EarI | CTCTTC | 6 cut(s) | 47, 98, 198, 338, 554, 729 |
| EciI | GGCGGA | 1 cut(s) | 559 |
| Ecl136II | GAGCTC | 3 cut(s) | 331, 914, 1114 |
| EclXI | CGGCCG | 4 cut(s) | 120, 889, 922, 1136 |
| Eco130I | CCWWGG | 3 cut(s) | 408, 812, 1380 |
| Eco24I | GRGCYC | 7 cut(s) | 333, 471, 725, 916, 1116, 1220, 1237 |
| Eco47I | GGWCC | 8 cut(s) | 745, 829, 968, 1287, 1324, 1342, 1503, 1555 |
| Eco52I | CGGCCG | 4 cut(s) | 120, 889, 922, 1136 |
| Eco53kI | GAGCTC | 3 cut(s) | 331, 914, 1114 |
| Eco57I | CTGAAG | 3 cut(s) | 818, 891, 1350 |
| Eco72I | CACGTG | 3 cut(s) | 257, 629, 1276 |
| Eco81I | CCTNAGG | 2 cut(s) | 749, 1199 |
| Eco88I | CYCGRG | 3 cut(s) | 248, 1349, 1460 |
| Eco91I | GGTNACC | 1 cut(s) | 1486 |
| EcoICRI | GAGCTC | 3 cut(s) | 331, 914, 1114 |
| EcoO109I | RGGNCCY | 4 cut(s) | 745, 1324, 1342, 1503 |
| EcoO65I | GGTNACC | 1 cut(s) | 1486 |
| EcoRII | CCWGG | 2 cut(s) | 1229, 1319 |
| EcoT14I | CCWWGG | 3 cut(s) | 408, 812, 1380 |
| EcoT38I | GRGCYC | 7 cut(s) | 333, 471, 725, 916, 1116, 1220, 1237 |
| EgeI | GGCGCC | 1 cut(s) | 1431 |
| EheI | GGCGCC | 1 cut(s) | 1431 |
| ErhI | CCWWGG | 3 cut(s) | 408, 812, 1380 |
| FaqI | GGGAC | 3 cut(s) | 411, 1300, 1337 |
| FauI | CCCGC | 2 cut(s) | 1244, 1276 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 8 cut(s) | 102, 120, 277, 324, 540, 755, 1456, 1511 |
| FokI | GGATG | 5 cut(s) | 1084, 1216, 1277, 1397, 1524 |
| FriOI | GRGCYC | 7 cut(s) | 333, 471, 725, 916, 1116, 1220, 1237 |
| Fsp4HI | GCNGC | 8 cut(s) | 102, 120, 277, 324, 540, 755, 1456, 1511 |
| FspBI | CTAG | 3 cut(s) | 113, 299, 849 |
| GlaI | GCGC | 2 cut(s) | 538, 1431 |
| GluI | GCNGC | 8 cut(s) | 102, 120, 277, 324, 540, 755, 1456, 1511 |
| GsaI | CCCAGC | 1 cut(s) | 722 |
| GsuI | CTGGAG | 1 cut(s) | 214 |
| HaeII | RGCGCY | 1 cut(s) | 1433 |
| HgaI | GACGC | 3 cut(s) | 537, 637, 829 |
| HhaI | GCGC | 2 cut(s) | 539, 1432 |
| Hin1I | GRCGYC | 1 cut(s) | 1430 |
| Hin6I | GCGC | 2 cut(s) | 537, 1430 |
| HinP1I | GCGC | 2 cut(s) | 537, 1430 |
| HincII | GTYRAC | 2 cut(s) | 877, 1479 |
| HindII | GTYRAC | 2 cut(s) | 877, 1479 |
| HinfI | GANTC | 3 cut(s) | 455, 894, 1148 |
| HphI | GGTGA | 7 cut(s) | 307, 380, 460, 1309, 1312, 1480, 1594 |
| Hpy166II | GTNNAC | 9 cut(s) | 200, 763, 877, 946, 1105, 1303, 1479, 1555, 1615 |
| Hpy188III | TCNNGA | 9 cut(s) | 289, 664, 748, 827, 849, 869, 902, 962, 1198 |
| Hpy8I | GTNNAC | 9 cut(s) | 200, 763, 877, 946, 1105, 1303, 1479, 1555, 1615 |
| Hpy99I | CGWCG | 6 cut(s) | 386, 407, 730, 890, 1130, 1262 |
| HpyAV | CCTTC | 5 cut(s) | 159, 761, 818, 842, 1459 |
| HpyCH4III | ACNGT | 7 cut(s) | 425, 588, 1039, 1258, 1486, 1606, 1619 |
| HpyCH4IV | ACGT | 8 cut(s) | 256, 376, 402, 628, 706, 948, 1275, 1392 |
| HpyCH4V | TGCA | 7 cut(s) | 393, 626, 1078, 1105, 1207, 1396, 1513 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 282, 1111, 1452 |
| HpyF3I | CTNAG | 6 cut(s) | 9, 327, 524, 749, 1199, 1571 |
| HpySE526I | ACGT | 8 cut(s) | 256, 376, 402, 628, 706, 948, 1275, 1392 |
| Hsp92I | GRCGYC | 1 cut(s) | 1430 |
| HspAI | GCGC | 2 cut(s) | 537, 1430 |
| KasI | GGCGCC | 1 cut(s) | 1429 |
| KflI | GGGWCCC | 1 cut(s) | 1324 |
| Kpn2I | TCCGGA | 1 cut(s) | 663 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| LguI | GCTCTTC | 1 cut(s) | 338 |
| LmnI | GCTCC | 4 cut(s) | 502, 860, 1028, 1111 |
| Lsp1109I | GCAGC | 4 cut(s) | 288, 335, 1442, 1497 |
| LweI | GCATC | 6 cut(s) | 540, 589, 842, 1194, 1375, 1546 |
| MaeI | CTAG | 3 cut(s) | 113, 299, 849 |
| MaeII | ACGT | 8 cut(s) | 256, 376, 402, 628, 706, 948, 1275, 1392 |
| MaeIII | GTNAC | 3 cut(s) | 385, 989, 1486 |
| MalI | GATC | 7 cut(s) | 18, 416, 620, 1052, 1119, 1132, 1414 |
| MboI | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| MflI | RGATCY | 2 cut(s) | 414, 1412 |
| MluCI | AATT | 4 cut(s) | 224, 243, 508, 1624 |
| Mly113I | GGCGCC | 1 cut(s) | 1430 |
| MlyI | GAGTC | 2 cut(s) | 464, 1157 |
| MmeI | TCCRAC | 2 cut(s) | 963, 1108 |
| MroI | TCCGGA | 1 cut(s) | 663 |
| MroXI | GAANNNNTTC | 1 cut(s) | 641 |
| MseI | TTAA | 1 cut(s) | 1521 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1086, 1259, 1295, 1542 |
| MspA1I | CMGCKG | 1 cut(s) | 326 |
| MspR9I | CCNGG | 9 cut(s) | 147, 249, 250, 1215, 1231, 1321, 1461, 1462, 1550 |
| MvaI | CCWGG | 2 cut(s) | 1231, 1321 |
| MvnI | CGCG | 1 cut(s) | 654 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 282, 1111, 1452 |
| NarI | GGCGCC | 1 cut(s) | 1430 |
| NciI | CCSGG | 7 cut(s) | 147, 249, 250, 1215, 1461, 1462, 1550 |
| NcoI | CCATGG | 1 cut(s) | 812 |
| NdeII | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| NlaIV | GGNNCC | 9 cut(s) | 170, 1218, 1235, 1288, 1325, 1326, 1344, 1431, 1504 |
| NmeAIII | GCCGAG | 1 cut(s) | 658 |
| NmuCI | GTSAC | 3 cut(s) | 385, 989, 1486 |
| NspI | RCATGY | 2 cut(s) | 393, 1309 |
| NspV | TTCGAA | 1 cut(s) | 591 |
| OliI | CACNNNNGTG | 1 cut(s) | 1259 |
| PaeR7I | CTCGAG | 1 cut(s) | 1349 |
| PagI | TCATGA | 1 cut(s) | 288 |
| PciI | ACATGT | 1 cut(s) | 1305 |
| PciSI | GCTCTTC | 1 cut(s) | 338 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 597, 1113, 1122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 641 |
| PfeI | GAWTC | 1 cut(s) | 894 |
| PflFI | GACNNNGTC | 1 cut(s) | 1256 |
| PfoI | TCCNGGA | 1 cut(s) | 145 |
| PinAI | ACCGGT | 1 cut(s) | 879 |
| PkrI | GCNGC | 8 cut(s) | 103, 121, 278, 325, 541, 756, 1457, 1512 |
| Ple19I | CGATCG | 1 cut(s) | 1120 |
| PleI | GAGTC | 2 cut(s) | 463, 1156 |
| PluTI | GGCGCC | 1 cut(s) | 1433 |
| PmaCI | CACGTG | 3 cut(s) | 257, 629, 1276 |
| PmlI | CACGTG | 3 cut(s) | 257, 629, 1276 |
| PpsI | GAGTC | 2 cut(s) | 463, 1156 |
| Ppu21I | YACGTR | 3 cut(s) | 257, 629, 1276 |
| PpuMI | RGGWCCY | 4 cut(s) | 745, 1324, 1342, 1503 |
| PscI | ACATGT | 1 cut(s) | 1305 |
| PshAI | GACNNNNGTC | 2 cut(s) | 743, 1484 |
| Psp124BI | GAGCTC | 3 cut(s) | 333, 916, 1116 |
| Psp5II | RGGWCCY | 4 cut(s) | 745, 1324, 1342, 1503 |
| Psp6I | CCWGG | 2 cut(s) | 1229, 1319 |
| PspCI | CACGTG | 3 cut(s) | 257, 629, 1276 |
| PspEI | GGTNACC | 1 cut(s) | 1486 |
| PspFI | CCCAGC | 1 cut(s) | 718 |
| PspGI | CCWGG | 2 cut(s) | 1229, 1319 |
| PspN4I | GGNNCC | 9 cut(s) | 170, 1218, 1235, 1288, 1325, 1326, 1344, 1431, 1504 |
| PspOMI | GGGCCC | 2 cut(s) | 1216, 1233 |
| PspPPI | RGGWCCY | 4 cut(s) | 745, 1324, 1342, 1503 |
| PspXI | VCTCGAGB | 1 cut(s) | 1349 |
| PstNI | CAGNNNCTG | 2 cut(s) | 645, 1037 |
| PsuI | RGATCY | 2 cut(s) | 414, 1412 |
| PsyI | GACNNNGTC | 1 cut(s) | 1256 |
| PvuI | CGATCG | 1 cut(s) | 1120 |
| PvuII | CAGCTG | 1 cut(s) | 326 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1086, 1259, 1295, 1542 |
| SacI | GAGCTC | 3 cut(s) | 333, 916, 1116 |
| SapI | GCTCTTC | 1 cut(s) | 338 |
| SaqAI | TTAA | 1 cut(s) | 1521 |
| SatI | GCNGC | 8 cut(s) | 102, 120, 277, 324, 540, 755, 1456, 1511 |
| Sau3AI | GATC | 7 cut(s) | 16, 414, 618, 1050, 1117, 1130, 1412 |
| SchI | GAGTC | 2 cut(s) | 464, 1157 |
| ScrFI | CCNGG | 9 cut(s) | 147, 249, 250, 1215, 1231, 1321, 1461, 1462, 1550 |
| SfaNI | GCATC | 6 cut(s) | 540, 589, 842, 1194, 1375, 1546 |
| SfoI | GGCGCC | 1 cut(s) | 1431 |
| Sfr274I | CTCGAG | 1 cut(s) | 1349 |
| SfuI | TTCGAA | 1 cut(s) | 591 |
| SinI | GGWCC | 8 cut(s) | 745, 829, 968, 1287, 1324, 1342, 1503, 1555 |
| SlaI | CTCGAG | 1 cut(s) | 1349 |
| SmaI | CCCGGG | 2 cut(s) | 250, 1462 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1086, 1259, 1295, 1542 |
| SmlI | CTYRAG | 1 cut(s) | 1349 |
| SmoI | CTYRAG | 1 cut(s) | 1349 |
| Sse9I | AATT | 4 cut(s) | 224, 243, 508, 1624 |
| SsiI | CCGC | 9 cut(s) | 102, 119, 540, 570, 652, 754, 1043, 1237, 1283 |
| SspDI | GGCGCC | 1 cut(s) | 1429 |
| SspMI | CTAG | 3 cut(s) | 113, 299, 849 |
| SstI | GAGCTC | 3 cut(s) | 333, 916, 1116 |
| StyD4I | CCNGG | 9 cut(s) | 145, 247, 248, 1213, 1229, 1319, 1459, 1460, 1548 |
| StyI | CCWWGG | 3 cut(s) | 408, 812, 1380 |
| TaaI | ACNGT | 7 cut(s) | 425, 588, 1039, 1258, 1486, 1606, 1619 |
| TaiI | ACGT | 8 cut(s) | 259, 379, 405, 631, 709, 951, 1278, 1395 |
| TaqI | TCGA | 5 cut(s) | 591, 728, 1053, 1116, 1350 |
| TasI | AATT | 4 cut(s) | 224, 243, 508, 1624 |
| TauI | GCSGC | 4 cut(s) | 104, 122, 542, 757 |
| TfiI | GAWTC | 1 cut(s) | 894 |
| Tru1I | TTAA | 1 cut(s) | 1521 |
| Tru9I | TTAA | 1 cut(s) | 1521 |
| TscAI | CASTG | 4 cut(s) | 76, 179, 1042, 1188 |
| TseFI | GTSAC | 3 cut(s) | 385, 989, 1486 |
| TseI | GCWGC | 4 cut(s) | 276, 323, 1455, 1510 |
| Tsp45I | GTSAC | 3 cut(s) | 385, 989, 1486 |
| TspDTI | ATGAA | 2 cut(s) | 73, 1604 |
| TspGWI | ACGGA | 1 cut(s) | 519 |
| TspMI | CCCGGG | 2 cut(s) | 248, 1460 |
| TspRI | CASTG | 4 cut(s) | 76, 179, 1042, 1188 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1256 |
| VneI | GTGCAC | 1 cut(s) | 1103 |
| VpaK11BI | GGWCC | 8 cut(s) | 745, 829, 968, 1287, 1324, 1342, 1503, 1555 |
| XbaI | TCTAGA | 1 cut(s) | 848 |
| XceI | RCATGY | 2 cut(s) | 393, 1309 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1227 |
| XhoI | CTCGAG | 1 cut(s) | 1349 |
| XmaI | CCCGGG | 2 cut(s) | 248, 1460 |
| XmnI | GAANNNNTTC | 1 cut(s) | 641 |
| XspI | CTAG | 3 cut(s) | 113, 299, 849 |