Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004640

Physical Location & Seq

Genomic Coordinates Forward (+)

15947508 .. 15949458

Gene Structure 1951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00295900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGAAAACAGACATTGAAAGCCTCTGGATTTTCGCCCTTGCTTCGAAATGCAGAGCTCTCTCCCAAGAAAGCATTGCATGTTCTCTTCTTGTCATCGCTCTCTCATGGCTCGCCATGACTCTCATTTACTGGGCTCATCCCGGCGGTCCGGCCTGGGGAAGAACCATCAAAAATATTATTACTAGACCAACTGCTATGATTCCCGGTCCGAGAGGTCTGCCGTTGACAGGCAGCATGAGCCTGATGACTGGTCTGGCCCACCGGAAAATCGCCGCCATGGCCGAGGCTTGCAACGCCAAGCGCCTCATGGCGTTCAGCCTGGGCCAGACTCGCGTCATCGTGACGTGTAACCCTGACGTGGCGAGAGAGATTCTCAACAGCTCCGTCTTCGCCGACCGGCCGGTGAAGGAGTCGGCCTACAGTCTGATGTTCAACCGGGCCATCGGGTTCGCCCCGTACGGAGTGTACTGGCGAACCTTGAGAAGAATCTCGGCCGCGCATCTCTTCTGCCCGAAACAAATCAAGGCCTCTGAGTCGCAACGGTCCGAGATTGCCTCCCAAATGGTGGCAATGTTCGGCGCGCAAGCGCAGAACCTGTGCGTGCGCGAGGCCCTCAAGAGAGCCTCCCTCAACAACATGATGTGCTCTGTTTTTGGACGCAAATATGAGCTTGATTCGGTCAGTGACGAAGTCGAAGAGCTTAAGTCGCTAGTGGACGAAGGCTACGACTTATTGGGTAAGTTGAACTGGTCTGACCATCTTCCTTTGCTCGCGGACTTTGACACCCAAAAAATCCGGTTCAGATGCTCCGAACTTGTCCCCAAAGTAAACCGGTTCGTTACCCGAATCATTTCGGAGCACCGGGCCCGAACCGGTGACAAATCCGCCCCGGACTTCGTTGACGTCTTGCTCTCACTCCAAGGAGCTGATAAATTATCAGACTCTGATATGATTGCCGTGCTTTGGGAAATGATATTTAGAGGGACGGACACAGTGGCGGTTCTGATCGAGTGGATTCTGGCGAGGTTGGTGCTTCATCCAGAAGTTCAATCAGCGGTGCATGCTGAACTGGACAAAGTAGTTGGGCGATCCCGAACCGTTGATGAGTTTGACGTCAATCAGATGGTGTATCTGACGGCTGTGGTGAAAGAGGTGCTGAGGCTGCACCCTCCGGGCCCGCTCTTATCATGGGCTCGCTTGGCCATCACCGATACAAAAATCGACGGGTGCCACGTGCCCCGAGGGACCACTGCGATGGTCAACATGTGGTCCATTTCGAGGGACCCAGATGTTTGGAGGGACCCGCTGGAATTTAAGCCTGAGAGATTTGTGGCGCAAAAGGGTGAGATGGAGTTTTCGGTTTTCGGATCAGATCTGAGGCTTGCGCCCTTCGGGTCGGGCAGGCGGACTTGCCCGGGAAAGGCGCTGGGGTTGACAACTGTCATGTACTGGGTGGCTTTGCTTTTGCACGAGTACGAATGGATGCCGTCCGATCAGAAGACCGTCGACTTGTCTGAAGTGCTAAAGCTATCTTGCGAGATGGCCAAGCCTCTGACTGTAAACGTGTGCCCAAGGCGTAGGATGAGCACAAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009791 GO:0010154 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0022414 GO:0032501 GO:0032502 GO:0044550 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055114 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

532

Amino Acids

59.57

Weight (kDa)

8.74

Isoelectric Point (pI)

33.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	68 - 503	2.8e-81	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004640)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46660 AT3G61880 AT3G61880
fragaria_vesca	FvH4_5g10880 FvH4_7g17300
malus_domestica	MD00G1036100.v1.1 MD00G1204600.v1.1 MD06G1119300.v1.1
prunus_persica	Prupe.2G194200_v2.0.a1 Prupe.5G129900_v2.0.a1
pyrus_communis	pycom01g11000 pycom06g11030 pycom07g15270
rosa_chinensis	RchiOBHm_Chr1g0360721 RchiOBHm_Chr7g0186981
rosa_laevigata	RLG00000004804 RLG00000027790
rosa_multiflora	Rmu_sc0001758.1_g000058 Rmu_ssc0000022.1_g000008
rosa_roxburghii	Rroxscaffold_4G00295900
rosa_rugosa	Rorug01G0281200 Rorug06G0478400
rosa_samantha	Rh1AG293200 Rh1BG257600 Rh1CG275500 Rh1DG287700 Rh7AG084000 Rh7BG078900 Rh7CG085100
rosa_wichuraiana	Rw1G025930 Rw7G007390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	906, 1116
AccB1I	GGYRCC	1 cut(s)	1227
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccBSI	CCGCTC	1 cut(s)	1180
AccI	GTMKAC	1 cut(s)	1506
AccII	CGCG	5 cut(s)	333, 497, 581, 606, 773
AclWI	GGATC	2 cut(s)	1083, 1375
AcoI	YGGCCR	5 cut(s)	279, 398, 492, 1200, 1542
AcsI	RAATTY	1 cut(s)	1310
AcuI	CTGAAG	1 cut(s)	1536
AcvI	CACGTG	1 cut(s)	1234
AcyI	GRCGYC	2 cut(s)	903, 1113
AfaI	GTAC	4 cut(s)	458, 467, 1448, 1475
AfiI	CCNNNNNNNGG	7 cut(s)	155, 227, 358, 565, 963, 1278, 1420
AflII	CTTAAG	1 cut(s)	701
AflIII	ACRYGT	3 cut(s)	344, 1263, 1563
AgeI	ACCGGT	2 cut(s)	831, 872
AgsI	TTSAA	4 cut(s)	17, 433, 745, 1049
AjiI	CACGTC	2 cut(s)	345, 358
AjnI	CCWGG	2 cut(s)	152, 318
AluBI	AGCT	6 cut(s)	56, 381, 670, 700, 926, 1528
AluI	AGCT	6 cut(s)	56, 381, 670, 700, 926, 1528
Alw21I	GWGCWC	4 cut(s)	58, 647, 861, 1589
AlwI	GGATC	2 cut(s)	1083, 1375
AlwNI	CAGNNNCTG	2 cut(s)	595, 944
Ama87I	CYCGRG	2 cut(s)	1239, 1414
ApaI	GGGCCC	2 cut(s)	868, 1178
ApeKI	GCWGC	2 cut(s)	231, 1162
ApoI	RAATTY	1 cut(s)	1310
AsiGI	ACCGGT	2 cut(s)	831, 872
Asp700I	GAANNNNTTC	1 cut(s)	850
AspLEI	GCGC	9 cut(s)	303, 499, 581, 583, 589, 606, 1336, 1387, 1426
AsuC2I	CCSGG	8 cut(s)	141, 204, 437, 863, 890, 1173, 1415, 1416
AsuHPI	GGTGA	5 cut(s)	415, 887, 1156, 1198, 1355
AsuII	TTCGAA	1 cut(s)	44
AvaI	CYCGRG	2 cut(s)	1239, 1414
AvaII	GGWCC	7 cut(s)	146, 206, 543, 1245, 1269, 1282, 1300
BaeGI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BalI	TGGCCA	2 cut(s)	1202, 1544
BanI	GGYRCC	1 cut(s)	1227
BanII	GRGCYC	5 cut(s)	58, 136, 868, 1178, 1195
BauI	CACGAG	1 cut(s)	1469
BbrPI	CACGTG	1 cut(s)	1234
BbsI	GAAGAC	2 cut(s)	379, 1505
Bbv12I	GWGCWC	4 cut(s)	58, 647, 861, 1589
BbvCI	CCTCAGC	1 cut(s)	1157
BbvI	GCAGC	2 cut(s)	243, 1149
BccI	CCATC	8 cut(s)	173, 449, 765, 1117, 1211, 1249, 1342, 1534
BceAI	ACGGC	4 cut(s)	205, 941, 1152, 1471
BcgI	CGANNNNNNTGC	4 cut(s)	199, 233, 1012, 1046
BciT130I	CCWGG	2 cut(s)	154, 320
BcnI	CCSGG	8 cut(s)	141, 204, 437, 863, 890, 1173, 1415, 1416
BfaI	CTAG	2 cut(s)	183, 710
BfmI	CTRYAG	1 cut(s)	418
BfoI	RGCGCY	2 cut(s)	304, 1427
BfrI	CTTAAG	1 cut(s)	701
BglI	GCCNNNNNGGC	1 cut(s)	278
BglII	AGATCT	1 cut(s)	1372
BisI	GCNGC	4 cut(s)	232, 273, 495, 1163
BlsI	GCNGC	4 cut(s)	233, 274, 496, 1164
Bme18I	GGWCC	7 cut(s)	146, 206, 543, 1245, 1269, 1282, 1300
BmeT110I	CYCGRG	2 cut(s)	1239, 1414
BmgBI	CACGTC	2 cut(s)	345, 358
BmiI	GGNNCC	8 cut(s)	866, 1176, 1229, 1246, 1283, 1284, 1301, 1302
BmrI	ACTGGG	2 cut(s)	139, 1459
BmsI	GCATC	3 cut(s)	508, 794, 1473
BmuI	ACTGGG	2 cut(s)	139, 1459
BoxI	GACNNNNGTC	2 cut(s)	332, 1439
BpiI	GAAGAC	2 cut(s)	379, 1505
BplI	GAGNNNNNCTC	6 cut(s)	357, 389, 539, 571, 612, 644
Bpu10I	CCTNAGC	1 cut(s)	1157
Bpu14I	TTCGAA	1 cut(s)	44
BpuEI	CTTGAG	2 cut(s)	499, 599
BpuMI	CCSGG	8 cut(s)	141, 204, 437, 863, 890, 1173, 1415, 1416
BsaAI	YACGTR	1 cut(s)	1234
BsaHI	GRCGYC	2 cut(s)	903, 1113
BsaJI	CCNNGG	9 cut(s)	153, 276, 282, 319, 888, 919, 1240, 1414, 1571
BsaWI	WCCGGW	4 cut(s)	261, 795, 831, 872
Bsc4I	CCNNNNNNNGG	7 cut(s)	155, 227, 358, 565, 963, 1278, 1420
Bse118I	RCCGGY	4 cut(s)	396, 400, 831, 872
Bse1I	ACTGG	6 cut(s)	134, 253, 473, 752, 1074, 1454
Bse3DI	GCAATG	2 cut(s)	72, 576
BseBI	CCWGG	2 cut(s)	154, 320
BseDI	CCNNGG	9 cut(s)	153, 276, 282, 319, 888, 919, 1240, 1414, 1571
BseGI	GGATG	4 cut(s)	136, 1036, 1488, 1587
BseLI	CCNNNNNNNGG	7 cut(s)	155, 227, 358, 565, 963, 1278, 1420
BseMI	GCAATG	2 cut(s)	72, 576
BseMII	CTCAG	4 cut(s)	522, 1148, 1311, 1367
BseNI	ACTGG	6 cut(s)	134, 253, 473, 752, 1074, 1454
BsePI	GCGCGC	1 cut(s)	579
BseSI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BseX3I	CGGCCG	2 cut(s)	398, 492
BseXI	GCAGC	2 cut(s)	243, 1149
BseYI	CCCAGC	1 cut(s)	1426
BsgI	GTGCAG	1 cut(s)	1148
Bsh1236I	CGCG	5 cut(s)	333, 497, 581, 606, 773
Bsh1285I	CGRYCG	3 cut(s)	397, 401, 495
BshNI	GGYRCC	1 cut(s)	1227
BshTI	ACCGGT	2 cut(s)	831, 872
BsiEI	CGRYCG	3 cut(s)	397, 401, 495
BsiHKAI	GWGCWC	4 cut(s)	58, 647, 861, 1589
BsiHKCI	CYCGRG	2 cut(s)	1239, 1414
BsiWI	CGTACG	1 cut(s)	456
BslFI	GGGAC	5 cut(s)	803, 997, 1258, 1295, 1313
BslI	CCNNNNNNNGG	7 cut(s)	155, 227, 358, 565, 963, 1278, 1420
BsmFI	GGGAC	5 cut(s)	803, 997, 1258, 1295, 1313
BsoBI	CYCGRG	2 cut(s)	1239, 1414
Bsp119I	TTCGAA	1 cut(s)	44
Bsp120I	GGGCCC	2 cut(s)	864, 1174
Bsp143I	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
Bsp19I	CCATGG	1 cut(s)	276
BspCNI	CTCAG	4 cut(s)	523, 1149, 1312, 1368
BspFNI	CGCG	5 cut(s)	333, 497, 581, 606, 773
BspLI	GGNNCC	8 cut(s)	866, 1176, 1229, 1246, 1283, 1284, 1301, 1302
BspPI	GGATC	2 cut(s)	1083, 1375
BspQI	GCTCTTC	1 cut(s)	690
BspT104I	TTCGAA	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1227
BspTI	CTTAAG	1 cut(s)	701
BsrBI	CCGCTC	1 cut(s)	1180
BsrDI	GCAATG	2 cut(s)	72, 576
BsrFI	RCCGGY	4 cut(s)	396, 400, 831, 872
BsrI	ACTGG	6 cut(s)	134, 253, 473, 752, 1074, 1454
BssAI	RCCGGY	4 cut(s)	396, 400, 831, 872
BssECI	CCNNGG	9 cut(s)	153, 276, 282, 319, 888, 919, 1240, 1414, 1571
BssHII	GCGCGC	1 cut(s)	579
BssMI	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
BssNI	GRCGYC	2 cut(s)	903, 1113
BssSI	CACGAG	1 cut(s)	1469
BssT1I	CCWWGG	3 cut(s)	276, 919, 1571
Bst2BI	CACGAG	1 cut(s)	1469
Bst2UI	CCWGG	2 cut(s)	154, 320
Bst4CI	ACNGT	7 cut(s)	422, 543, 994, 1099, 1441, 1504, 1558
Bst6I	CTCTTC	3 cut(s)	90, 509, 690
BstACI	GRCGYC	2 cut(s)	903, 1113
BstAFI	CTTAAG	1 cut(s)	701
BstBAI	YACGTR	1 cut(s)	1234
BstBI	TTCGAA	1 cut(s)	44
BstDEI	CTNAG	4 cut(s)	531, 1157, 1320, 1376
BstDSI	CCRYGG	1 cut(s)	276
BstF5I	GGATG	4 cut(s)	136, 1036, 1488, 1587
BstFNI	CGCG	5 cut(s)	333, 497, 581, 606, 773
BstH2I	RGCGCY	2 cut(s)	304, 1427
BstHHI	GCGC	9 cut(s)	303, 499, 581, 583, 589, 606, 1336, 1387, 1426
BstKTI	GATC	5 cut(s)	1008, 1091, 1370, 1375, 1495
BstMBI	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
BstMCI	CGRYCG	3 cut(s)	397, 401, 495
BstMWI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1162, 1199
BstNI	CCWGG	2 cut(s)	154, 320
BstNSI	RCATGY	3 cut(s)	81, 1064, 1267
BstPAI	GACNNNNGTC	2 cut(s)	332, 1439
BstSFI	CTRYAG	1 cut(s)	418
BstSLI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BstUI	CGCG	5 cut(s)	333, 497, 581, 606, 773
BstV1I	GCAGC	2 cut(s)	243, 1149
BstV2I	GAAGAC	2 cut(s)	379, 1505
BstX2I	RGATCY	1 cut(s)	1372
BstXI	CCANNNNNNTGG	2 cut(s)	1255, 1293
BstYI	RGATCY	1 cut(s)	1372
BstZI	CGGCCG	2 cut(s)	398, 492
BtgI	CCRYGG	1 cut(s)	276
BtgZI	GCGATG	2 cut(s)	79, 1268
BtrI	CACGTC	2 cut(s)	345, 358
BtsCI	GGATG	4 cut(s)	136, 1036, 1488, 1587
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	3 cut(s)	688, 999, 1248
CaiI	CAGNNNCTG	2 cut(s)	595, 944
CfoI	GCGC	9 cut(s)	303, 499, 581, 583, 589, 606, 1336, 1387, 1426
Cfr10I	RCCGGY	4 cut(s)	396, 400, 831, 872
Cfr9I	CCCGGG	1 cut(s)	1414
CpoI	CGGWCCG	3 cut(s)	146, 206, 543
CseI	GACGC	2 cut(s)	322, 666
Csp6I	GTAC	4 cut(s)	457, 466, 1447, 1474
CspAI	ACCGGT	2 cut(s)	831, 872
CspI	CGGWCCG	3 cut(s)	146, 206, 543
CviQI	GTAC	4 cut(s)	457, 466, 1447, 1474
DdeI	CTNAG	4 cut(s)	531, 1157, 1320, 1376
DpnI	GATC	5 cut(s)	1007, 1090, 1369, 1374, 1494
DpnII	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
EaeI	YGGCCR	5 cut(s)	279, 398, 492, 1200, 1542
EagI	CGGCCG	2 cut(s)	398, 492
Eam1104I	CTCTTC	3 cut(s)	90, 509, 690
EarI	CTCTTC	3 cut(s)	90, 509, 690
EciI	GGCGGA	2 cut(s)	874, 1420
Ecl136II	GAGCTC	1 cut(s)	56
EclXI	CGGCCG	2 cut(s)	398, 492
Eco130I	CCWWGG	3 cut(s)	276, 919, 1571
Eco147I	AGGCCT	1 cut(s)	527
Eco24I	GRGCYC	5 cut(s)	58, 136, 868, 1178, 1195
Eco47I	GGWCC	7 cut(s)	146, 206, 543, 1245, 1269, 1282, 1300
Eco52I	CGGCCG	2 cut(s)	398, 492
Eco53kI	GAGCTC	1 cut(s)	56
Eco57I	CTGAAG	1 cut(s)	1536
Eco72I	CACGTG	1 cut(s)	1234
Eco88I	CYCGRG	2 cut(s)	1239, 1414
EcoICRI	GAGCTC	1 cut(s)	56
EcoO109I	RGGNCCY	3 cut(s)	610, 1282, 1300
EcoRII	CCWGG	2 cut(s)	152, 318
EcoT14I	CCWWGG	3 cut(s)	276, 919, 1571
EcoT38I	GRGCYC	5 cut(s)	58, 136, 868, 1178, 1195
ErhI	CCWWGG	3 cut(s)	276, 919, 1571
FaqI	GGGAC	5 cut(s)	803, 997, 1258, 1295, 1313
FauI	CCCGC	2 cut(s)	1185, 1311
FblI	GTMKAC	1 cut(s)	1506
Fnu4HI	GCNGC	4 cut(s)	232, 273, 495, 1163
FokI	GGATG	4 cut(s)	123, 1023, 1495, 1594
FriOI	GRGCYC	5 cut(s)	58, 136, 868, 1178, 1195
Fsp4HI	GCNGC	4 cut(s)	232, 273, 495, 1163
FspBI	CTAG	2 cut(s)	183, 710
GlaI	GCGC	9 cut(s)	302, 498, 580, 582, 588, 605, 1335, 1386, 1425
GluI	GCNGC	4 cut(s)	232, 273, 495, 1163
GsaI	CCCAGC	1 cut(s)	1430
HaeII	RGCGCY	2 cut(s)	304, 1427
HgaI	GACGC	2 cut(s)	322, 666
HhaI	GCGC	9 cut(s)	303, 499, 581, 583, 589, 606, 1336, 1387, 1426
Hin1I	GRCGYC	2 cut(s)	903, 1113
Hin6I	GCGC	9 cut(s)	301, 497, 579, 581, 587, 604, 1334, 1385, 1424
HinP1I	GCGC	9 cut(s)	301, 497, 579, 581, 587, 604, 1334, 1385, 1424
HincII	GTYRAC	5 cut(s)	225, 901, 1261, 1434, 1507
HindII	GTYRAC	5 cut(s)	225, 901, 1261, 1434, 1507
HphI	GGTGA	5 cut(s)	415, 887, 1156, 1198, 1355
Hpy166II	GTNNAC	9 cut(s)	225, 466, 715, 829, 901, 1261, 1434, 1507, 1561
Hpy188III	TCNNGA	5 cut(s)	25, 340, 616, 1040, 1092
Hpy8I	GTNNAC	9 cut(s)	225, 466, 715, 829, 901, 1261, 1434, 1507, 1561
Hpy99I	CGWCG	2 cut(s)	1226, 1508
HpyAV	CCTTC	3 cut(s)	400, 713, 1399
HpyCH4III	ACNGT	7 cut(s)	422, 543, 994, 1099, 1441, 1504, 1558
HpyCH4IV	ACGT	6 cut(s)	344, 357, 903, 1113, 1233, 1563
HpyCH4V	TGCA	6 cut(s)	51, 77, 291, 1060, 1165, 1468
HpyF10VI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1162, 1199
HpyF3I	CTNAG	4 cut(s)	531, 1157, 1320, 1376
HpySE526I	ACGT	6 cut(s)	344, 357, 903, 1113, 1233, 1563
Hsp92I	GRCGYC	2 cut(s)	903, 1113
HspAI	GCGC	9 cut(s)	301, 497, 579, 581, 587, 604, 1334, 1385, 1424
KflI	GGGWCCC	2 cut(s)	1282, 1300
Kzo9I	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
LguI	GCTCTTC	1 cut(s)	690
LmnI	GCTCC	4 cut(s)	386, 812, 856, 923
Lsp1109I	GCAGC	2 cut(s)	243, 1149
LweI	GCATC	3 cut(s)	508, 794, 1473
MaeI	CTAG	2 cut(s)	183, 710
MaeII	ACGT	6 cut(s)	344, 357, 903, 1113, 1233, 1563
MaeIII	GTNAC	5 cut(s)	340, 347, 683, 838, 875
MalI	GATC	5 cut(s)	1007, 1090, 1369, 1374, 1494
MbiI	CCGCTC	1 cut(s)	1180
MboI	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
MboII	GAAGA	8 cut(s)	77, 171, 379, 495, 496, 707, 752, 1510
MflI	RGATCY	1 cut(s)	1372
MlsI	TGGCCA	2 cut(s)	1202, 1544
MluCI	AATT	2 cut(s)	932, 1310
MluNI	TGGCCA	2 cut(s)	1202, 1544
MlyI	GAGTC	5 cut(s)	112, 322, 419, 542, 935
Mox20I	TGGCCA	2 cut(s)	1202, 1544
MroXI	GAANNNNTTC	1 cut(s)	850
MscI	TGGCCA	2 cut(s)	1202, 1544
MseI	TTAA	2 cut(s)	702, 1314
MslI	CAYNNNNRTG	1 cut(s)	1253
Msp20I	TGGCCA	2 cut(s)	1202, 1544
MspA1I	CMGCKG	2 cut(s)	1055, 1306
MspCI	CTTAAG	1 cut(s)	701
MvaI	CCWGG	2 cut(s)	154, 320
MvnI	CGCG	5 cut(s)	333, 497, 581, 606, 773
MwoI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1162, 1199
NciI	CCSGG	8 cut(s)	141, 204, 437, 863, 890, 1173, 1415, 1416
NcoI	CCATGG	1 cut(s)	276
NdeII	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
NlaIV	GGNNCC	8 cut(s)	866, 1176, 1229, 1246, 1283, 1284, 1301, 1302
NmeAIII	GCCGAG	2 cut(s)	307, 470
NmuCI	GTSAC	3 cut(s)	340, 683, 875
NspI	RCATGY	3 cut(s)	81, 1064, 1267
NspV	TTCGAA	1 cut(s)	44
PaeI	GCATGC	1 cut(s)	1064
PauI	GCGCGC	1 cut(s)	579
PceI	AGGCCT	1 cut(s)	527
PciI	ACATGT	1 cut(s)	1263
PciSI	GCTCTTC	1 cut(s)	690
PcsI	WCGNNNNNNNCGW	2 cut(s)	723, 1230
PdmI	GAANNNNTTC	1 cut(s)	850
PfeI	GAWTC	6 cut(s)	199, 370, 486, 674, 846, 1015
Pfl23II	CGTACG	1 cut(s)	456
PflFI	GACNNNGTC	1 cut(s)	689
PflMI	CCANNNNNTGG	1 cut(s)	565
PinAI	ACCGGT	2 cut(s)	831, 872
PkrI	GCNGC	4 cut(s)	233, 274, 496, 1164
PleI	GAGTC	5 cut(s)	112, 322, 418, 541, 935
PmaCI	CACGTG	1 cut(s)	1234
PmlI	CACGTG	1 cut(s)	1234
PpsI	GAGTC	5 cut(s)	112, 322, 418, 541, 935
Ppu21I	YACGTR	1 cut(s)	1234
PpuMI	RGGWCCY	2 cut(s)	1282, 1300
PscI	ACATGT	1 cut(s)	1263
PshAI	GACNNNNGTC	2 cut(s)	332, 1439
Psp124BI	GAGCTC	1 cut(s)	58
Psp5II	RGGWCCY	2 cut(s)	1282, 1300
Psp6I	CCWGG	2 cut(s)	152, 318
PspCI	CACGTG	1 cut(s)	1234
PspFI	CCCAGC	1 cut(s)	1426
PspGI	CCWGG	2 cut(s)	152, 318
PspLI	CGTACG	1 cut(s)	456
PspN4I	GGNNCC	8 cut(s)	866, 1176, 1229, 1246, 1283, 1284, 1301, 1302
PspOMI	GGGCCC	2 cut(s)	864, 1174
PspPPI	RGGWCCY	2 cut(s)	1282, 1300
PstNI	CAGNNNCTG	2 cut(s)	595, 944
PsuI	RGATCY	1 cut(s)	1372
PsyI	GACNNNGTC	1 cut(s)	689
PteI	GCGCGC	1 cut(s)	579
RsaI	GTAC	4 cut(s)	458, 467, 1448, 1475
RsaNI	GTAC	4 cut(s)	457, 466, 1447, 1474
RseI	CAYNNNNRTG	1 cut(s)	1253
Rsr2I	CGGWCCG	3 cut(s)	146, 206, 543
RsrII	CGGWCCG	3 cut(s)	146, 206, 543
SacI	GAGCTC	1 cut(s)	58
SalI	GTCGAC	1 cut(s)	1505
SapI	GCTCTTC	1 cut(s)	690
SaqAI	TTAA	2 cut(s)	702, 1314
SatI	GCNGC	4 cut(s)	232, 273, 495, 1163
Sau3AI	GATC	5 cut(s)	1005, 1088, 1367, 1372, 1492
SchI	GAGTC	5 cut(s)	112, 322, 419, 542, 935
SfaNI	GCATC	3 cut(s)	508, 794, 1473
SfcI	CTRYAG	1 cut(s)	418
SfuI	TTCGAA	1 cut(s)	44
SinI	GGWCC	7 cut(s)	146, 206, 543, 1245, 1269, 1282, 1300
SmaI	CCCGGG	1 cut(s)	1416
SmiMI	CAYNNNNRTG	1 cut(s)	1253
SmlI	CTYRAG	3 cut(s)	478, 614, 701
SmoI	CTYRAG	3 cut(s)	478, 614, 701
SphI	GCATGC	1 cut(s)	1064
Sse9I	AATT	2 cut(s)	932, 1310
SseBI	AGGCCT	1 cut(s)	527
SspI	AATATT	1 cut(s)	175
SspMI	CTAG	2 cut(s)	183, 710
SstI	GAGCTC	1 cut(s)	58
StuI	AGGCCT	1 cut(s)	527
StyI	CCWWGG	3 cut(s)	276, 919, 1571
TaaI	ACNGT	7 cut(s)	422, 543, 994, 1099, 1441, 1504, 1558
TaiI	ACGT	6 cut(s)	347, 360, 906, 1116, 1236, 1566
TaqI	TCGA	6 cut(s)	44, 693, 1008, 1221, 1277, 1506
TaqII	GACCGA	1 cut(s)	667
TasI	AATT	2 cut(s)	932, 1310
TatI	WGTACW	2 cut(s)	465, 1446
TauI	GCSGC	2 cut(s)	275, 497
TfiI	GAWTC	6 cut(s)	199, 370, 486, 674, 846, 1015
Tru1I	TTAA	2 cut(s)	702, 1314
Tru9I	TTAA	2 cut(s)	702, 1314
TscAI	CASTG	3 cut(s)	688, 999, 1255
TseFI	GTSAC	3 cut(s)	340, 683, 875
TseI	GCWGC	2 cut(s)	231, 1162
Tsp45I	GTSAC	3 cut(s)	340, 683, 875
TspDTI	ATGAA	2 cut(s)	17, 1025
TspGWI	ACGGA	3 cut(s)	373, 474, 1001
TspMI	CCCGGG	1 cut(s)	1414
TspRI	CASTG	3 cut(s)	688, 999, 1255
Tth111I	GACNNNGTC	1 cut(s)	689
Van91I	CCANNNNNTGG	1 cut(s)	565
Vha464I	CTTAAG	1 cut(s)	701
VpaK11BI	GGWCC	7 cut(s)	146, 206, 543, 1245, 1269, 1282, 1300
XapI	RAATTY	1 cut(s)	1310
XceI	RCATGY	3 cut(s)	81, 1064, 1267
XcmI	CCANNNNNNNNNTGG	1 cut(s)	304
XmaI	CCCGGG	1 cut(s)	1414
XmiI	GTMKAC	1 cut(s)	1506
XmnI	GAANNNNTTC	1 cut(s)	850
XspI	CTAG	2 cut(s)	183, 710
ZraI	GACGTC	2 cut(s)	904, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.