protein import into mitochondrial matrix
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61865 |
| fragaria_vesca | FvH4_5g09640 FvH4_5g09640 |
| malus_domestica | MD14G1146800.v1.1 |
| prunus_persica | Prupe.5G140800_v2.0.a1 Prupe.5G140800_v2.0.a1 Prupe.5G140800_v2.0.a1 Prupe.5G140800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0188601 |
| rosa_laevigata | RLG00000004680 RLG00000018903 |
| rosa_roxburghii | Rroxscaffold_2G00117180 Rroxscaffold_3G00266220 |
| rosa_rugosa | Rorug06G0491500 |
| rosa_samantha | Rh7AG096500 Rh7BG098400 Rh7CG099300 Rh7DG098500 |
| rosa_wichuraiana | Rw7G008340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1080 |
| AccI | GTMKAC | 1 cut(s) | 466 |
| AccII | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| AccIII | TCCGGA | 1 cut(s) | 393 |
| AciI | CCGC | 6 cut(s) | 140, 336, 523, 593, 782, 1136 |
| AclWI | GGATC | 5 cut(s) | 283, 289, 297, 385, 653 |
| AcsI | RAATTY | 2 cut(s) | 546, 818 |
| AdeI | CACNNNGTG | 2 cut(s) | 586, 1139 |
| AfaI | GTAC | 1 cut(s) | 674 |
| AgsI | TTSAA | 2 cut(s) | 559, 871 |
| AjnI | CCWGG | 2 cut(s) | 1042, 1097 |
| Alw21I | GWGCWC | 1 cut(s) | 45 |
| Alw26I | GTCTC | 7 cut(s) | 20, 73, 134, 194, 305, 407, 884 |
| AlwI | GGATC | 5 cut(s) | 283, 289, 297, 385, 653 |
| Aor13HI | TCCGGA | 1 cut(s) | 393 |
| AoxI | GGCC | 3 cut(s) | 73, 333, 795 |
| ApeKI | GCWGC | 5 cut(s) | 326, 572, 752, 889, 1211 |
| ApoI | RAATTY | 2 cut(s) | 546, 818 |
| AspLEI | GCGC | 6 cut(s) | 37, 326, 647, 649, 1000, 1086 |
| AspS9I | GGNCC | 3 cut(s) | 217, 445, 1046 |
| AsuHPI | GGTGA | 4 cut(s) | 452, 745, 775, 1125 |
| AsuII | TTCGAA | 1 cut(s) | 544 |
| AvaII | GGWCC | 3 cut(s) | 217, 445, 1046 |
| BanII | GRGCYC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| BauI | CACGAG | 1 cut(s) | 77 |
| BbsI | GAAGAC | 1 cut(s) | 142 |
| Bbv12I | GWGCWC | 1 cut(s) | 45 |
| BbvI | GCAGC | 5 cut(s) | 313, 584, 764, 876, 1198 |
| BccI | CCATC | 4 cut(s) | 199, 698, 736, 1078 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 572, 606 |
| BciT130I | CCWGG | 2 cut(s) | 1044, 1099 |
| BciVI | GTATCC | 1 cut(s) | 1164 |
| BcoDI | GTCTC | 7 cut(s) | 20, 73, 134, 194, 305, 407, 884 |
| BfaI | CTAG | 2 cut(s) | 953, 1122 |
| BfoI | RGCGCY | 2 cut(s) | 1001, 1087 |
| BfuI | GTATCC | 1 cut(s) | 1164 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 341 |
| BglII | AGATCT | 1 cut(s) | 318 |
| BisI | GCNGC | 7 cut(s) | 327, 336, 573, 753, 783, 890, 1212 |
| BlsI | GCNGC | 7 cut(s) | 328, 337, 574, 754, 784, 891, 1213 |
| Bme1390I | CCNGG | 2 cut(s) | 1044, 1099 |
| Bme18I | GGWCC | 3 cut(s) | 217, 445, 1046 |
| BmgT120I | GGNCC | 3 cut(s) | 217, 445, 1046 |
| BmiI | GGNNCC | 3 cut(s) | 296, 839, 1048 |
| BmrFI | CCNGG | 2 cut(s) | 1044, 1099 |
| BmsI | GCATC | 1 cut(s) | 1153 |
| BoxI | GACNNNNGTC | 1 cut(s) | 419 |
| BpiI | GAAGAC | 1 cut(s) | 142 |
| Bpu10I | CCTNAGC | 1 cut(s) | 894 |
| Bpu14I | TTCGAA | 1 cut(s) | 544 |
| BpuEI | CTTGAG | 4 cut(s) | 176, 402, 866, 1205 |
| Bsa29I | ATCGAT | 1 cut(s) | 501 |
| BsaAI | YACGTR | 1 cut(s) | 676 |
| BsaBI | GATNNNNATC | 3 cut(s) | 122, 258, 280 |
| BsaI | GGTCTC | 2 cut(s) | 134, 194 |
| BsaJI | CCNNGG | 6 cut(s) | 330, 339, 663, 798, 927, 1098 |
| BsaWI | WCCGGW | 2 cut(s) | 45, 393 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 32, 62, 459, 489 |
| Bse3DI | GCAATG | 1 cut(s) | 753 |
| Bse8I | GATNNNNATC | 3 cut(s) | 122, 258, 280 |
| BseAI | TCCGGA | 1 cut(s) | 393 |
| BseBI | CCWGG | 2 cut(s) | 1044, 1099 |
| BseCI | ATCGAT | 1 cut(s) | 501 |
| BseDI | CCNNGG | 6 cut(s) | 330, 339, 663, 798, 927, 1098 |
| BseGI | GGATG | 2 cut(s) | 237, 1168 |
| BseJI | GATNNNNATC | 3 cut(s) | 122, 258, 280 |
| BseMI | GCAATG | 1 cut(s) | 753 |
| BseMII | CTCAG | 5 cut(s) | 15, 70, 84, 128, 885 |
| BsePI | GCGCGC | 1 cut(s) | 645 |
| BseRI | GAGGAG | 2 cut(s) | 554, 638 |
| BseXI | GCAGC | 5 cut(s) | 313, 584, 764, 876, 1198 |
| BseYI | CCCAGC | 3 cut(s) | 241, 598, 1049 |
| Bsh1236I | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| Bsh1285I | CGRYCG | 1 cut(s) | 501 |
| BshFI | GGCC | 3 cut(s) | 75, 335, 797 |
| BshVI | ATCGAT | 1 cut(s) | 501 |
| BsiEI | CGRYCG | 1 cut(s) | 501 |
| BsiHKAI | GWGCWC | 1 cut(s) | 45 |
| BsiSI | CCGG | 3 cut(s) | 38, 46, 394 |
| BsmAI | GTCTC | 7 cut(s) | 20, 73, 134, 194, 305, 407, 884 |
| BsmBI | CGTCTC | 2 cut(s) | 73, 305 |
| BsnI | GGCC | 3 cut(s) | 75, 335, 797 |
| Bso31I | GGTCTC | 2 cut(s) | 134, 194 |
| Bsp119I | TTCGAA | 1 cut(s) | 544 |
| Bsp1286I | GDGCHC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| Bsp13I | TCCGGA | 1 cut(s) | 393 |
| Bsp19I | CCATGG | 2 cut(s) | 339, 663 |
| BspACI | CCGC | 6 cut(s) | 140, 336, 523, 593, 782, 1136 |
| BspANI | GGCC | 3 cut(s) | 75, 335, 797 |
| BspCNI | CTCAG | 5 cut(s) | 16, 69, 83, 127, 886 |
| BspDI | ATCGAT | 1 cut(s) | 501 |
| BspEI | TCCGGA | 1 cut(s) | 393 |
| BspFNI | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| BspLI | GGNNCC | 3 cut(s) | 296, 839, 1048 |
| BspPI | GGATC | 5 cut(s) | 283, 289, 297, 385, 653 |
| BspT104I | TTCGAA | 1 cut(s) | 544 |
| BspTNI | GGTCTC | 2 cut(s) | 134, 194 |
| BsrDI | GCAATG | 1 cut(s) | 753 |
| BssECI | CCNNGG | 6 cut(s) | 330, 339, 663, 798, 927, 1098 |
| BssHII | GCGCGC | 1 cut(s) | 645 |
| BssSI | CACGAG | 1 cut(s) | 77 |
| BssT1I | CCWWGG | 4 cut(s) | 330, 339, 663, 927 |
| Bst2BI | CACGAG | 1 cut(s) | 77 |
| Bst2UI | CCWGG | 2 cut(s) | 1044, 1099 |
| Bst4CI | ACNGT | 5 cut(s) | 199, 299, 464, 517, 1114 |
| Bst6I | CTCTTC | 4 cut(s) | 55, 137, 138, 309 |
| BstBAI | YACGTR | 1 cut(s) | 676 |
| BstBI | TTCGAA | 1 cut(s) | 544 |
| BstC8I | GCNNGC | 8 cut(s) | 346, 350, 430, 647, 814, 1055, 1140, 1245 |
| BstDEI | CTNAG | 5 cut(s) | 24, 56, 70, 114, 894 |
| BstDSI | CCRYGG | 2 cut(s) | 339, 663 |
| BstF5I | GGATG | 2 cut(s) | 237, 1168 |
| BstFNI | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| BstH2I | RGCGCY | 2 cut(s) | 1001, 1087 |
| BstHHI | GCGC | 6 cut(s) | 37, 326, 647, 649, 1000, 1086 |
| BstMAI | GTCTC | 7 cut(s) | 20, 73, 134, 194, 305, 407, 884 |
| BstMCI | CGRYCG | 1 cut(s) | 501 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 161, 332, 335, 341, 385, 752, 803, 895, 914 |
| BstNI | CCWGG | 2 cut(s) | 1044, 1099 |
| BstNSI | RCATGY | 1 cut(s) | 1247 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 419 |
| BstSCI | CCNGG | 2 cut(s) | 1042, 1097 |
| BstUI | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| BstV1I | GCAGC | 5 cut(s) | 313, 584, 764, 876, 1198 |
| BstV2I | GAAGAC | 1 cut(s) | 142 |
| BstX2I | RGATCY | 2 cut(s) | 275, 318 |
| BstYI | RGATCY | 2 cut(s) | 275, 318 |
| Bsu15I | ATCGAT | 1 cut(s) | 501 |
| BsuI | GTATCC | 1 cut(s) | 1164 |
| BsuRI | GGCC | 3 cut(s) | 75, 335, 797 |
| BsuTUI | ATCGAT | 1 cut(s) | 501 |
| BtgI | CCRYGG | 2 cut(s) | 339, 663 |
| BtgZI | GCGATG | 2 cut(s) | 245, 630 |
| BtsCI | GGATG | 2 cut(s) | 237, 1168 |
| Cac8I | GCNNGC | 8 cut(s) | 346, 350, 430, 647, 814, 1055, 1140, 1245 |
| CfoI | GCGC | 6 cut(s) | 37, 326, 647, 649, 1000, 1086 |
| Cfr13I | GGNCC | 3 cut(s) | 217, 445, 1046 |
| ClaI | ATCGAT | 1 cut(s) | 501 |
| Csp6I | GTAC | 1 cut(s) | 673 |
| CviAII | CATG | 5 cut(s) | 340, 442, 664, 958, 1244 |
| CviQI | GTAC | 1 cut(s) | 673 |
| DdeI | CTNAG | 5 cut(s) | 24, 56, 70, 114, 894 |
| DraIII | CACNNNGTG | 2 cut(s) | 586, 1139 |
| Eam1104I | CTCTTC | 4 cut(s) | 55, 137, 138, 309 |
| EarI | CTCTTC | 4 cut(s) | 55, 137, 138, 309 |
| Ecl136II | GAGCTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 4 cut(s) | 330, 339, 663, 927 |
| Eco147I | AGGCCT | 1 cut(s) | 797 |
| Eco24I | GRGCYC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| Eco31I | GGTCTC | 2 cut(s) | 134, 194 |
| Eco47I | GGWCC | 3 cut(s) | 217, 445, 1046 |
| Eco53kI | GAGCTC | 1 cut(s) | 43 |
| EcoICRI | GAGCTC | 1 cut(s) | 43 |
| EcoRII | CCWGG | 2 cut(s) | 1042, 1097 |
| EcoT14I | CCWWGG | 4 cut(s) | 330, 339, 663, 927 |
| EcoT22I | ATGCAT | 1 cut(s) | 1245 |
| EcoT38I | GRGCYC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| ErhI | CCWWGG | 4 cut(s) | 330, 339, 663, 927 |
| Esp3I | CGTCTC | 2 cut(s) | 73, 305 |
| FaeI | CATG | 5 cut(s) | 343, 445, 667, 961, 1247 |
| FaiI | YATR | 7 cut(s) | 12, 341, 443, 665, 959, 1080, 1245 |
| FatI | CATG | 5 cut(s) | 339, 441, 663, 957, 1243 |
| FblI | GTMKAC | 1 cut(s) | 466 |
| Fnu4HI | GCNGC | 7 cut(s) | 327, 336, 573, 753, 783, 890, 1212 |
| FokI | GGATG | 2 cut(s) | 224, 1175 |
| FriOI | GRGCYC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| Fsp4HI | GCNGC | 7 cut(s) | 327, 336, 573, 753, 783, 890, 1212 |
| FspBI | CTAG | 2 cut(s) | 953, 1122 |
| GlaI | GCGC | 6 cut(s) | 36, 325, 646, 648, 999, 1085 |
| GluI | GCNGC | 7 cut(s) | 327, 336, 573, 753, 783, 890, 1212 |
| GsaI | CCCAGC | 3 cut(s) | 245, 602, 1053 |
| HaeII | RGCGCY | 2 cut(s) | 1001, 1087 |
| HaeIII | GGCC | 3 cut(s) | 75, 335, 797 |
| HapII | CCGG | 3 cut(s) | 38, 46, 394 |
| HhaI | GCGC | 6 cut(s) | 37, 326, 647, 649, 1000, 1086 |
| Hin1II | CATG | 5 cut(s) | 343, 445, 667, 961, 1247 |
| Hin6I | GCGC | 6 cut(s) | 35, 324, 645, 647, 998, 1084 |
| HinP1I | GCGC | 6 cut(s) | 35, 324, 645, 647, 998, 1084 |
| HincII | GTYRAC | 4 cut(s) | 424, 467, 520, 529 |
| HindII | GTYRAC | 4 cut(s) | 424, 467, 520, 529 |
| HindIII | AAGCTT | 2 cut(s) | 179, 1055 |
| HinfI | GANTC | 8 cut(s) | 63, 123, 222, 254, 382, 397, 408, 415 |
| HpaII | CCGG | 3 cut(s) | 38, 46, 394 |
| HphI | GGTGA | 4 cut(s) | 452, 745, 775, 1125 |
| Hpy166II | GTNNAC | 4 cut(s) | 424, 467, 520, 529 |
| Hpy188III | TCNNGA | 6 cut(s) | 193, 226, 279, 394, 412, 581 |
| Hpy8I | GTNNAC | 4 cut(s) | 424, 467, 520, 529 |
| Hpy99I | CGWCG | 1 cut(s) | 468 |
| HpyAV | CCTTC | 4 cut(s) | 730, 865, 1076, 1200 |
| HpyCH4III | ACNGT | 5 cut(s) | 199, 299, 464, 517, 1114 |
| HpyCH4IV | ACGT | 2 cut(s) | 675, 1156 |
| HpyCH4V | TGCA | 4 cut(s) | 634, 806, 1142, 1243 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 161, 332, 335, 341, 385, 752, 803, 895, 914 |
| HpyF3I | CTNAG | 5 cut(s) | 24, 56, 70, 114, 894 |
| HpySE526I | ACGT | 2 cut(s) | 675, 1156 |
| Hsp92II | CATG | 5 cut(s) | 343, 445, 667, 961, 1247 |
| HspAI | GCGC | 6 cut(s) | 35, 324, 645, 647, 998, 1084 |
| Kpn2I | TCCGGA | 1 cut(s) | 393 |
| LmnI | GCTCC | 7 cut(s) | 40, 48, 567, 625, 843, 943, 1219 |
| Lsp1109I | GCAGC | 5 cut(s) | 313, 584, 764, 876, 1198 |
| LweI | GCATC | 1 cut(s) | 1153 |
| MaeI | CTAG | 2 cut(s) | 953, 1122 |
| MaeII | ACGT | 2 cut(s) | 675, 1156 |
| MaeIII | GTNAC | 2 cut(s) | 922, 1117 |
| MboII | GAAGA | 9 cut(s) | 72, 100, 124, 142, 155, 326, 478, 903, 1052 |
| MflI | RGATCY | 2 cut(s) | 275, 318 |
| MhlI | GDGCHC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| MluCI | AATT | 6 cut(s) | 165, 546, 818, 866, 1074, 1200 |
| MlyI | GAGTC | 2 cut(s) | 72, 409 |
| MmeI | TCCRAC | 2 cut(s) | 756, 984 |
| Mph1103I | ATGCAT | 1 cut(s) | 1245 |
| MroI | TCCGGA | 1 cut(s) | 393 |
| MseI | TTAA | 2 cut(s) | 687, 1249 |
| MspA1I | CMGCKG | 2 cut(s) | 379, 388 |
| MspI | CCGG | 3 cut(s) | 38, 46, 394 |
| MspR9I | CCNGG | 2 cut(s) | 1044, 1099 |
| MvaI | CCWGG | 2 cut(s) | 1044, 1099 |
| MvnI | CGCG | 4 cut(s) | 95, 525, 647, 1138 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 161, 332, 335, 341, 385, 752, 803, 895, 914 |
| NcoI | CCATGG | 2 cut(s) | 339, 663 |
| NlaIII | CATG | 5 cut(s) | 343, 445, 667, 961, 1247 |
| NlaIV | GGNNCC | 3 cut(s) | 296, 839, 1048 |
| NsiI | ATGCAT | 1 cut(s) | 1245 |
| NspI | RCATGY | 1 cut(s) | 1247 |
| NspV | TTCGAA | 1 cut(s) | 544 |
| PaeI | GCATGC | 1 cut(s) | 1247 |
| PauI | GCGCGC | 1 cut(s) | 645 |
| PceI | AGGCCT | 1 cut(s) | 797 |
| PfeI | GAWTC | 6 cut(s) | 123, 222, 254, 382, 397, 408 |
| PkrI | GCNGC | 7 cut(s) | 328, 337, 574, 754, 784, 891, 1213 |
| Ple19I | CGATCG | 1 cut(s) | 501 |
| PleI | GAGTC | 2 cut(s) | 71, 409 |
| PpsI | GAGTC | 2 cut(s) | 71, 409 |
| Ppu21I | YACGTR | 1 cut(s) | 676 |
| PshAI | GACNNNNGTC | 1 cut(s) | 419 |
| PsiI | TTATAA | 1 cut(s) | 1080 |
| Psp124BI | GAGCTC | 1 cut(s) | 45 |
| Psp6I | CCWGG | 2 cut(s) | 1042, 1097 |
| PspFI | CCCAGC | 3 cut(s) | 241, 598, 1049 |
| PspGI | CCWGG | 2 cut(s) | 1042, 1097 |
| PspN4I | GGNNCC | 3 cut(s) | 296, 839, 1048 |
| PspPI | GGNCC | 3 cut(s) | 217, 445, 1046 |
| PsuI | RGATCY | 2 cut(s) | 275, 318 |
| PteI | GCGCGC | 1 cut(s) | 645 |
| PvuI | CGATCG | 1 cut(s) | 501 |
| PvuII | CAGCTG | 2 cut(s) | 379, 388 |
| RsaI | GTAC | 1 cut(s) | 674 |
| RsaNI | GTAC | 1 cut(s) | 673 |
| SacI | GAGCTC | 1 cut(s) | 45 |
| SalI | GTCGAC | 1 cut(s) | 465 |
| SaqAI | TTAA | 2 cut(s) | 687, 1249 |
| SatI | GCNGC | 7 cut(s) | 327, 336, 573, 753, 783, 890, 1212 |
| Sau96I | GGNCC | 3 cut(s) | 217, 445, 1046 |
| SchI | GAGTC | 2 cut(s) | 72, 409 |
| ScrFI | CCNGG | 2 cut(s) | 1044, 1099 |
| SduI | GDGCHC | 5 cut(s) | 45, 605, 900, 1040, 1184 |
| SfaNI | GCATC | 1 cut(s) | 1153 |
| SfuI | TTCGAA | 1 cut(s) | 544 |
| SinI | GGWCC | 3 cut(s) | 217, 445, 1046 |
| SmlI | CTYRAG | 4 cut(s) | 191, 417, 881, 1220 |
| SmoI | CTYRAG | 4 cut(s) | 191, 417, 881, 1220 |
| SphI | GCATGC | 1 cut(s) | 1247 |
| Sse9I | AATT | 6 cut(s) | 165, 546, 818, 866, 1074, 1200 |
| SseBI | AGGCCT | 1 cut(s) | 797 |
| SsiI | CCGC | 6 cut(s) | 140, 336, 523, 593, 782, 1136 |
| SspMI | CTAG | 2 cut(s) | 953, 1122 |
| SstI | GAGCTC | 1 cut(s) | 45 |
| StuI | AGGCCT | 1 cut(s) | 797 |
| StyD4I | CCNGG | 2 cut(s) | 1042, 1097 |
| StyI | CCWWGG | 4 cut(s) | 330, 339, 663, 927 |
| TaaI | ACNGT | 5 cut(s) | 199, 299, 464, 517, 1114 |
| TaiI | ACGT | 2 cut(s) | 678, 1159 |
| TaqI | TCGA | 4 cut(s) | 411, 466, 501, 544 |
| TaqII | GACCGA | 2 cut(s) | 116, 234 |
| TasI | AATT | 6 cut(s) | 165, 546, 818, 866, 1074, 1200 |
| TauI | GCSGC | 2 cut(s) | 338, 785 |
| TfiI | GAWTC | 6 cut(s) | 123, 222, 254, 382, 397, 408 |
| Tru1I | TTAA | 2 cut(s) | 687, 1249 |
| Tru9I | TTAA | 2 cut(s) | 687, 1249 |
| TseI | GCWGC | 5 cut(s) | 326, 572, 752, 889, 1211 |
| TspDTI | ATGAA | 2 cut(s) | 101, 191 |
| TspGWI | ACGGA | 1 cut(s) | 830 |
| VpaK11BI | GGWCC | 3 cut(s) | 217, 445, 1046 |
| XapI | RAATTY | 2 cut(s) | 546, 818 |
| XceI | RCATGY | 1 cut(s) | 1247 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 337, 1156 |
| XmiI | GTMKAC | 1 cut(s) | 466 |
| XspI | CTAG | 2 cut(s) | 953, 1122 |
| Zsp2I | ATGCAT | 1 cut(s) | 1245 |