Prupe.5G140800_v2.0.a1

protein import into mitochondrial matrix

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13119718 .. 13122237
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G140800.1

Sequence Viewer

Length: 1251 bp
ATGGGAAGCCATAGGAGATTATCTGAGACTTCTGCGCCGGAGCTCCGGTCAAAACTCAGAAGAGTCGTCTCAGGCCACGAGCAAATGAAGATCGCGTTCCACCAGCTCAAATCTCAGATCGGAATCGGTCTCTTCCAAGCGGAAGAGGTCTTCGCCTCTCTCGCAATTCCATTGATGAAGCTTGTAGGTCTCAAGACGGTGGAGATGGCGAACGAGGACCGATTCACGACCATTATCATCCCAGCAAACACCGATTCTCATCGCCAGAGTTTCGGATCTGGATCATCGGATCGGAACCGTCTCTCTGTGAAAGAAGAGATCTGCGCTGCCAAGGCCGCCATGGCAGGCAAGCTCGTAATGGAGAAGCAAAAAGATCAGCTGATTCAGCTGATCCGGATTCTCAAACGAATCGAGACTCAAGTCAACGCTCGCCAGAGCCACATGGTCCAAACCCTAACTCACCGTCGACTTTACCTCCACAAGTTCTTCCACAGAGCGATCGATTATCTATCCACCGTTGACCGCGTTGACCACCAGACCTTTCGAATTTCAGTATTGAAGCTCCTCCGAGCAGCGTTTCACGAAGTGGGTGCGGTGCTGGGCTCGGTGGAGAGCGATGTGGAGGAGCTTTTGCAGGATTTGGGCGCGCAGATGTGTGATCCCATGGTAGAGTACGTGGAGGGTGTTAAGGCTGATTTGAGTGATGGGGGTTGTGTGAGGTTAGTGGGCTTGGTGAAGGAGATGGCAATGGCAGCGAGAGAGGTGAGGGTTGAGTTGGAGGCGGCGAGGAACAAGGCCTCGGTTGCAGAAGCGAGCAAATTTGAGGCTTTGAGTAGGCTCCGTGAAGCAGAGGACAATGTGAGCAAATTGAAGGAGTGTCTCAAGTTGCTGCCTGAGCCCAATAAGGCTTCTTCTGCCAAAGTAACCAAGGCTTTTGCTCCACACAAGTTTCTAGGCATGGAGAAAGAACAACCAAACGATGAGAAGCTGTTGTGGGCGCTGTTGGAAAAGAAAAGGAAGTATCAAACACCAGAGAGCCCACCTGGACCCAGCAAGCTTCTTCCCCTTCCATCAATTTATAAGCGCCAAAGATCAACCAGGGCAAAGCCAACAGTAGTAACTAGGACTTATTCACCGCGTGCAAGAACCACTCCACGTTTGGATGCTCGGATACTATTGGGCTCATCTCCTTCGGCGACAATTCAGAAAGCTGCTCCACTCAAGCAAATCTCTCCCAAAATGCATGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

417

Amino Acids

46.55

Weight (kDa)

9.82

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1080
AccI GTMKAC 1 cut(s) 466
AccII CGCG 4 cut(s) 95, 525, 647, 1138
AccIII TCCGGA 1 cut(s) 393
AciI CCGC 6 cut(s) 140, 336, 523, 593, 782, 1136
AclWI GGATC 5 cut(s) 283, 289, 297, 385, 653
AcsI RAATTY 2 cut(s) 546, 818
AdeI CACNNNGTG 2 cut(s) 586, 1139
AfaI GTAC 1 cut(s) 674
AgsI TTSAA 2 cut(s) 559, 871
AjnI CCWGG 2 cut(s) 1042, 1097
Alw21I GWGCWC 1 cut(s) 45
Alw26I GTCTC 7 cut(s) 20, 73, 134, 194, 305, 407, 884
AlwI GGATC 5 cut(s) 283, 289, 297, 385, 653
Aor13HI TCCGGA 1 cut(s) 393
AoxI GGCC 3 cut(s) 73, 333, 795
ApeKI GCWGC 5 cut(s) 326, 572, 752, 889, 1211
ApoI RAATTY 2 cut(s) 546, 818
AspLEI GCGC 6 cut(s) 37, 326, 647, 649, 1000, 1086
AspS9I GGNCC 3 cut(s) 217, 445, 1046
AsuHPI GGTGA 4 cut(s) 452, 745, 775, 1125
AsuII TTCGAA 1 cut(s) 544
AvaII GGWCC 3 cut(s) 217, 445, 1046
BanII GRGCYC 5 cut(s) 45, 605, 900, 1040, 1184
BauI CACGAG 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 142
Bbv12I GWGCWC 1 cut(s) 45
BbvI GCAGC 5 cut(s) 313, 584, 764, 876, 1198
BccI CCATC 4 cut(s) 199, 698, 736, 1078
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 2 cut(s) 1044, 1099
BciVI GTATCC 1 cut(s) 1164
BcoDI GTCTC 7 cut(s) 20, 73, 134, 194, 305, 407, 884
BfaI CTAG 2 cut(s) 953, 1122
BfoI RGCGCY 2 cut(s) 1001, 1087
BfuI GTATCC 1 cut(s) 1164
BglI GCCNNNNNGGC 1 cut(s) 341
BglII AGATCT 1 cut(s) 318
BisI GCNGC 7 cut(s) 327, 336, 573, 753, 783, 890, 1212
BlsI GCNGC 7 cut(s) 328, 337, 574, 754, 784, 891, 1213
Bme1390I CCNGG 2 cut(s) 1044, 1099
Bme18I GGWCC 3 cut(s) 217, 445, 1046
BmgT120I GGNCC 3 cut(s) 217, 445, 1046
BmiI GGNNCC 3 cut(s) 296, 839, 1048
BmrFI CCNGG 2 cut(s) 1044, 1099
BmsI GCATC 1 cut(s) 1153
BoxI GACNNNNGTC 1 cut(s) 419
BpiI GAAGAC 1 cut(s) 142
Bpu10I CCTNAGC 1 cut(s) 894
Bpu14I TTCGAA 1 cut(s) 544
BpuEI CTTGAG 4 cut(s) 176, 402, 866, 1205
Bsa29I ATCGAT 1 cut(s) 501
BsaAI YACGTR 1 cut(s) 676
BsaBI GATNNNNATC 3 cut(s) 122, 258, 280
BsaI GGTCTC 2 cut(s) 134, 194
BsaJI CCNNGG 6 cut(s) 330, 339, 663, 798, 927, 1098
BsaWI WCCGGW 2 cut(s) 45, 393
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 459, 489
Bse3DI GCAATG 1 cut(s) 753
Bse8I GATNNNNATC 3 cut(s) 122, 258, 280
BseAI TCCGGA 1 cut(s) 393
BseBI CCWGG 2 cut(s) 1044, 1099
BseCI ATCGAT 1 cut(s) 501
BseDI CCNNGG 6 cut(s) 330, 339, 663, 798, 927, 1098
BseGI GGATG 2 cut(s) 237, 1168
BseJI GATNNNNATC 3 cut(s) 122, 258, 280
BseMI GCAATG 1 cut(s) 753
BseMII CTCAG 5 cut(s) 15, 70, 84, 128, 885
BsePI GCGCGC 1 cut(s) 645
BseRI GAGGAG 2 cut(s) 554, 638
BseXI GCAGC 5 cut(s) 313, 584, 764, 876, 1198
BseYI CCCAGC 3 cut(s) 241, 598, 1049
Bsh1236I CGCG 4 cut(s) 95, 525, 647, 1138
Bsh1285I CGRYCG 1 cut(s) 501
BshFI GGCC 3 cut(s) 75, 335, 797
BshVI ATCGAT 1 cut(s) 501
BsiEI CGRYCG 1 cut(s) 501
BsiHKAI GWGCWC 1 cut(s) 45
BsiSI CCGG 3 cut(s) 38, 46, 394
BsmAI GTCTC 7 cut(s) 20, 73, 134, 194, 305, 407, 884
BsmBI CGTCTC 2 cut(s) 73, 305
BsnI GGCC 3 cut(s) 75, 335, 797
Bso31I GGTCTC 2 cut(s) 134, 194
Bsp119I TTCGAA 1 cut(s) 544
Bsp1286I GDGCHC 5 cut(s) 45, 605, 900, 1040, 1184
Bsp13I TCCGGA 1 cut(s) 393
Bsp19I CCATGG 2 cut(s) 339, 663
BspACI CCGC 6 cut(s) 140, 336, 523, 593, 782, 1136
BspANI GGCC 3 cut(s) 75, 335, 797
BspCNI CTCAG 5 cut(s) 16, 69, 83, 127, 886
BspDI ATCGAT 1 cut(s) 501
BspEI TCCGGA 1 cut(s) 393
BspFNI CGCG 4 cut(s) 95, 525, 647, 1138
BspLI GGNNCC 3 cut(s) 296, 839, 1048
BspPI GGATC 5 cut(s) 283, 289, 297, 385, 653
BspT104I TTCGAA 1 cut(s) 544
BspTNI GGTCTC 2 cut(s) 134, 194
BsrDI GCAATG 1 cut(s) 753
BssECI CCNNGG 6 cut(s) 330, 339, 663, 798, 927, 1098
BssHII GCGCGC 1 cut(s) 645
BssSI CACGAG 1 cut(s) 77
BssT1I CCWWGG 4 cut(s) 330, 339, 663, 927
Bst2BI CACGAG 1 cut(s) 77
Bst2UI CCWGG 2 cut(s) 1044, 1099
Bst4CI ACNGT 5 cut(s) 199, 299, 464, 517, 1114
Bst6I CTCTTC 4 cut(s) 55, 137, 138, 309
BstBAI YACGTR 1 cut(s) 676
BstBI TTCGAA 1 cut(s) 544
BstC8I GCNNGC 8 cut(s) 346, 350, 430, 647, 814, 1055, 1140, 1245
BstDEI CTNAG 5 cut(s) 24, 56, 70, 114, 894
BstDSI CCRYGG 2 cut(s) 339, 663
BstF5I GGATG 2 cut(s) 237, 1168
BstFNI CGCG 4 cut(s) 95, 525, 647, 1138
BstH2I RGCGCY 2 cut(s) 1001, 1087
BstHHI GCGC 6 cut(s) 37, 326, 647, 649, 1000, 1086
BstMAI GTCTC 7 cut(s) 20, 73, 134, 194, 305, 407, 884
BstMCI CGRYCG 1 cut(s) 501
BstMWI GCNNNNNNNGC 9 cut(s) 161, 332, 335, 341, 385, 752, 803, 895, 914
BstNI CCWGG 2 cut(s) 1044, 1099
BstNSI RCATGY 1 cut(s) 1247
BstPAI GACNNNNGTC 1 cut(s) 419
BstSCI CCNGG 2 cut(s) 1042, 1097
BstUI CGCG 4 cut(s) 95, 525, 647, 1138
BstV1I GCAGC 5 cut(s) 313, 584, 764, 876, 1198
BstV2I GAAGAC 1 cut(s) 142
BstX2I RGATCY 2 cut(s) 275, 318
BstYI RGATCY 2 cut(s) 275, 318
Bsu15I ATCGAT 1 cut(s) 501
BsuI GTATCC 1 cut(s) 1164
BsuRI GGCC 3 cut(s) 75, 335, 797
BsuTUI ATCGAT 1 cut(s) 501
BtgI CCRYGG 2 cut(s) 339, 663
BtgZI GCGATG 2 cut(s) 245, 630
BtsCI GGATG 2 cut(s) 237, 1168
Cac8I GCNNGC 8 cut(s) 346, 350, 430, 647, 814, 1055, 1140, 1245
CfoI GCGC 6 cut(s) 37, 326, 647, 649, 1000, 1086
Cfr13I GGNCC 3 cut(s) 217, 445, 1046
ClaI ATCGAT 1 cut(s) 501
Csp6I GTAC 1 cut(s) 673
CviAII CATG 5 cut(s) 340, 442, 664, 958, 1244
CviQI GTAC 1 cut(s) 673
DdeI CTNAG 5 cut(s) 24, 56, 70, 114, 894
DraIII CACNNNGTG 2 cut(s) 586, 1139
Eam1104I CTCTTC 4 cut(s) 55, 137, 138, 309
EarI CTCTTC 4 cut(s) 55, 137, 138, 309
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 4 cut(s) 330, 339, 663, 927
Eco147I AGGCCT 1 cut(s) 797
Eco24I GRGCYC 5 cut(s) 45, 605, 900, 1040, 1184
Eco31I GGTCTC 2 cut(s) 134, 194
Eco47I GGWCC 3 cut(s) 217, 445, 1046
Eco53kI GAGCTC 1 cut(s) 43
EcoICRI GAGCTC 1 cut(s) 43
EcoRII CCWGG 2 cut(s) 1042, 1097
EcoT14I CCWWGG 4 cut(s) 330, 339, 663, 927
EcoT22I ATGCAT 1 cut(s) 1245
EcoT38I GRGCYC 5 cut(s) 45, 605, 900, 1040, 1184
ErhI CCWWGG 4 cut(s) 330, 339, 663, 927
Esp3I CGTCTC 2 cut(s) 73, 305
FaeI CATG 5 cut(s) 343, 445, 667, 961, 1247
FaiI YATR 7 cut(s) 12, 341, 443, 665, 959, 1080, 1245
FatI CATG 5 cut(s) 339, 441, 663, 957, 1243
FblI GTMKAC 1 cut(s) 466
Fnu4HI GCNGC 7 cut(s) 327, 336, 573, 753, 783, 890, 1212
FokI GGATG 2 cut(s) 224, 1175
FriOI GRGCYC 5 cut(s) 45, 605, 900, 1040, 1184
Fsp4HI GCNGC 7 cut(s) 327, 336, 573, 753, 783, 890, 1212
FspBI CTAG 2 cut(s) 953, 1122
GlaI GCGC 6 cut(s) 36, 325, 646, 648, 999, 1085
GluI GCNGC 7 cut(s) 327, 336, 573, 753, 783, 890, 1212
GsaI CCCAGC 3 cut(s) 245, 602, 1053
HaeII RGCGCY 2 cut(s) 1001, 1087
HaeIII GGCC 3 cut(s) 75, 335, 797
HapII CCGG 3 cut(s) 38, 46, 394
HhaI GCGC 6 cut(s) 37, 326, 647, 649, 1000, 1086
Hin1II CATG 5 cut(s) 343, 445, 667, 961, 1247
Hin6I GCGC 6 cut(s) 35, 324, 645, 647, 998, 1084
HinP1I GCGC 6 cut(s) 35, 324, 645, 647, 998, 1084
HincII GTYRAC 4 cut(s) 424, 467, 520, 529
HindII GTYRAC 4 cut(s) 424, 467, 520, 529
HindIII AAGCTT 2 cut(s) 179, 1055
HinfI GANTC 8 cut(s) 63, 123, 222, 254, 382, 397, 408, 415
HpaII CCGG 3 cut(s) 38, 46, 394
HphI GGTGA 4 cut(s) 452, 745, 775, 1125
Hpy166II GTNNAC 4 cut(s) 424, 467, 520, 529
Hpy188III TCNNGA 6 cut(s) 193, 226, 279, 394, 412, 581
Hpy8I GTNNAC 4 cut(s) 424, 467, 520, 529
Hpy99I CGWCG 1 cut(s) 468
HpyAV CCTTC 4 cut(s) 730, 865, 1076, 1200
HpyCH4III ACNGT 5 cut(s) 199, 299, 464, 517, 1114
HpyCH4IV ACGT 2 cut(s) 675, 1156
HpyCH4V TGCA 4 cut(s) 634, 806, 1142, 1243
HpyF10VI GCNNNNNNNGC 9 cut(s) 161, 332, 335, 341, 385, 752, 803, 895, 914
HpyF3I CTNAG 5 cut(s) 24, 56, 70, 114, 894
HpySE526I ACGT 2 cut(s) 675, 1156
Hsp92II CATG 5 cut(s) 343, 445, 667, 961, 1247
HspAI GCGC 6 cut(s) 35, 324, 645, 647, 998, 1084
Kpn2I TCCGGA 1 cut(s) 393
LmnI GCTCC 7 cut(s) 40, 48, 567, 625, 843, 943, 1219
Lsp1109I GCAGC 5 cut(s) 313, 584, 764, 876, 1198
LweI GCATC 1 cut(s) 1153
MaeI CTAG 2 cut(s) 953, 1122
MaeII ACGT 2 cut(s) 675, 1156
MaeIII GTNAC 2 cut(s) 922, 1117
MboII GAAGA 9 cut(s) 72, 100, 124, 142, 155, 326, 478, 903, 1052
MflI RGATCY 2 cut(s) 275, 318
MhlI GDGCHC 5 cut(s) 45, 605, 900, 1040, 1184
MluCI AATT 6 cut(s) 165, 546, 818, 866, 1074, 1200
MlyI GAGTC 2 cut(s) 72, 409
MmeI TCCRAC 2 cut(s) 756, 984
Mph1103I ATGCAT 1 cut(s) 1245
MroI TCCGGA 1 cut(s) 393
MseI TTAA 2 cut(s) 687, 1249
MspA1I CMGCKG 2 cut(s) 379, 388
MspI CCGG 3 cut(s) 38, 46, 394
MspR9I CCNGG 2 cut(s) 1044, 1099
MvaI CCWGG 2 cut(s) 1044, 1099
MvnI CGCG 4 cut(s) 95, 525, 647, 1138
MwoI GCNNNNNNNGC 9 cut(s) 161, 332, 335, 341, 385, 752, 803, 895, 914
NcoI CCATGG 2 cut(s) 339, 663
NlaIII CATG 5 cut(s) 343, 445, 667, 961, 1247
NlaIV GGNNCC 3 cut(s) 296, 839, 1048
NsiI ATGCAT 1 cut(s) 1245
NspI RCATGY 1 cut(s) 1247
NspV TTCGAA 1 cut(s) 544
PaeI GCATGC 1 cut(s) 1247
PauI GCGCGC 1 cut(s) 645
PceI AGGCCT 1 cut(s) 797
PfeI GAWTC 6 cut(s) 123, 222, 254, 382, 397, 408
PkrI GCNGC 7 cut(s) 328, 337, 574, 754, 784, 891, 1213
Ple19I CGATCG 1 cut(s) 501
PleI GAGTC 2 cut(s) 71, 409
PpsI GAGTC 2 cut(s) 71, 409
Ppu21I YACGTR 1 cut(s) 676
PshAI GACNNNNGTC 1 cut(s) 419
PsiI TTATAA 1 cut(s) 1080
Psp124BI GAGCTC 1 cut(s) 45
Psp6I CCWGG 2 cut(s) 1042, 1097
PspFI CCCAGC 3 cut(s) 241, 598, 1049
PspGI CCWGG 2 cut(s) 1042, 1097
PspN4I GGNNCC 3 cut(s) 296, 839, 1048
PspPI GGNCC 3 cut(s) 217, 445, 1046
PsuI RGATCY 2 cut(s) 275, 318
PteI GCGCGC 1 cut(s) 645
PvuI CGATCG 1 cut(s) 501
PvuII CAGCTG 2 cut(s) 379, 388
RsaI GTAC 1 cut(s) 674
RsaNI GTAC 1 cut(s) 673
SacI GAGCTC 1 cut(s) 45
SalI GTCGAC 1 cut(s) 465
SaqAI TTAA 2 cut(s) 687, 1249
SatI GCNGC 7 cut(s) 327, 336, 573, 753, 783, 890, 1212
Sau96I GGNCC 3 cut(s) 217, 445, 1046
SchI GAGTC 2 cut(s) 72, 409
ScrFI CCNGG 2 cut(s) 1044, 1099
SduI GDGCHC 5 cut(s) 45, 605, 900, 1040, 1184
SfaNI GCATC 1 cut(s) 1153
SfuI TTCGAA 1 cut(s) 544
SinI GGWCC 3 cut(s) 217, 445, 1046
SmlI CTYRAG 4 cut(s) 191, 417, 881, 1220
SmoI CTYRAG 4 cut(s) 191, 417, 881, 1220
SphI GCATGC 1 cut(s) 1247
Sse9I AATT 6 cut(s) 165, 546, 818, 866, 1074, 1200
SseBI AGGCCT 1 cut(s) 797
SsiI CCGC 6 cut(s) 140, 336, 523, 593, 782, 1136
SspMI CTAG 2 cut(s) 953, 1122
SstI GAGCTC 1 cut(s) 45
StuI AGGCCT 1 cut(s) 797
StyD4I CCNGG 2 cut(s) 1042, 1097
StyI CCWWGG 4 cut(s) 330, 339, 663, 927
TaaI ACNGT 5 cut(s) 199, 299, 464, 517, 1114
TaiI ACGT 2 cut(s) 678, 1159
TaqI TCGA 4 cut(s) 411, 466, 501, 544
TaqII GACCGA 2 cut(s) 116, 234
TasI AATT 6 cut(s) 165, 546, 818, 866, 1074, 1200
TauI GCSGC 2 cut(s) 338, 785
TfiI GAWTC 6 cut(s) 123, 222, 254, 382, 397, 408
Tru1I TTAA 2 cut(s) 687, 1249
Tru9I TTAA 2 cut(s) 687, 1249
TseI GCWGC 5 cut(s) 326, 572, 752, 889, 1211
TspDTI ATGAA 2 cut(s) 101, 191
TspGWI ACGGA 1 cut(s) 830
VpaK11BI GGWCC 3 cut(s) 217, 445, 1046
XapI RAATTY 2 cut(s) 546, 818
XceI RCATGY 1 cut(s) 1247
XcmI CCANNNNNNNNNTGG 2 cut(s) 337, 1156
XmiI GTMKAC 1 cut(s) 466
XspI CTAG 2 cut(s) 953, 1122
Zsp2I ATGCAT 1 cut(s) 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.