PHD and RING finger domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g13310 |
| malus_domestica | MD06G1206300.v1.1 |
| prunus_persica | Prupe.5G210700_v2.0.a1 Prupe.5G210700_v2.0.a1 |
| pyrus_communis | pycom06g18420 |
| rosa_chinensis | RchiOBHm_Chr7g0183831 |
| rosa_laevigata | RLG00000005017 |
| rosa_multiflora | Rmu_sc0013966.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00270150 |
| rosa_rugosa | Rorug06G0461100 |
| rosa_samantha | Rh7AG061800 Rh7BG061900 Rh7CG063400 Rh7DG061600 |
| rosa_wichuraiana | Rw7G005110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 124 |
| Acc36I | ACCTGC | 1 cut(s) | 2183 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1108, 2054 |
| AccBSI | CCGCTC | 1 cut(s) | 425 |
| AccI | GTMKAC | 4 cut(s) | 268, 766, 856, 1091 |
| AccII | CGCG | 1 cut(s) | 324 |
| AciI | CCGC | 4 cut(s) | 152, 295, 423, 1868 |
| AclWI | GGATC | 3 cut(s) | 589, 921, 1527 |
| AcsI | RAATTY | 2 cut(s) | 536, 964 |
| AdeI | CACNNNGTG | 1 cut(s) | 953 |
| AfaI | GTAC | 5 cut(s) | 664, 745, 790, 942, 1188 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1108, 2054 |
| AjnI | CCWGG | 1 cut(s) | 1675 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1417, 1449 |
| AleI | CACNNNNGTG | 1 cut(s) | 936 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1598, 1630 |
| AluBI | AGCT | 8 cut(s) | 120, 551, 990, 1420, 1628, 1813, 1951, 2076 |
| AluI | AGCT | 8 cut(s) | 120, 551, 990, 1420, 1628, 1813, 1951, 2076 |
| Alw21I | GWGCWC | 3 cut(s) | 933, 1630, 1815 |
| Alw26I | GTCTC | 2 cut(s) | 1327, 1726 |
| Alw44I | GTGCAC | 1 cut(s) | 929 |
| AlwI | GGATC | 3 cut(s) | 589, 921, 1527 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1108, 2198 |
| AoxI | GGCC | 3 cut(s) | 1542, 1654, 1778 |
| ApaLI | GTGCAC | 1 cut(s) | 929 |
| ApeKI | GCWGC | 6 cut(s) | 120, 231, 1209, 1212, 2027, 2085 |
| ApoI | RAATTY | 2 cut(s) | 536, 964 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1917, 1949 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 390, 968 |
| AspLEI | GCGC | 3 cut(s) | 125, 1217, 1306 |
| AspS9I | GGNCC | 2 cut(s) | 67, 1778 |
| AsuHPI | GGTGA | 3 cut(s) | 247, 1665, 1753 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BaeGI | GKGCMC | 1 cut(s) | 933 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 646, 679 |
| BanII | GRGCYC | 2 cut(s) | 1630, 1815 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 525, 557, 933, 965 |
| BauI | CACGAG | 1 cut(s) | 1560 |
| BbsI | GAAGAC | 2 cut(s) | 383, 1818 |
| Bbv12I | GWGCWC | 3 cut(s) | 933, 1630, 1815 |
| BbvI | GCAGC | 6 cut(s) | 107, 218, 1221, 1224, 2014, 2072 |
| BccI | CCATC | 4 cut(s) | 565, 927, 1162, 2027 |
| BciT130I | CCWGG | 1 cut(s) | 1677 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcoDI | GTCTC | 2 cut(s) | 1327, 1726 |
| BfaI | CTAG | 3 cut(s) | 1437, 1647, 1838 |
| BfmI | CTRYAG | 1 cut(s) | 1018 |
| BfuAI | ACCTGC | 1 cut(s) | 2183 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2024 |
| BisI | GCNGC | 7 cut(s) | 121, 232, 423, 1210, 1213, 2028, 2086 |
| BlsI | GCNGC | 7 cut(s) | 122, 233, 424, 1211, 1214, 2029, 2087 |
| Bme1390I | CCNGG | 1 cut(s) | 1677 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 2 cut(s) | 67, 1778 |
| BmiI | GGNNCC | 2 cut(s) | 69, 315 |
| BmrFI | CCNGG | 1 cut(s) | 1677 |
| BmrI | ACTGGG | 1 cut(s) | 564 |
| BmsI | GCATC | 4 cut(s) | 1897, 1972, 2053, 2118 |
| BmuI | ACTGGG | 1 cut(s) | 564 |
| BpiI | GAAGAC | 2 cut(s) | 383, 1818 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 613, 645 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1629 |
| BpuEI | CTTGAG | 1 cut(s) | 1462 |
| Bsa29I | ATCGAT | 1 cut(s) | 168 |
| BsaBI | GATNNNNATC | 3 cut(s) | 623, 918, 1518 |
| BsaI | GGTCTC | 1 cut(s) | 1327 |
| BsaWI | WCCGGW | 1 cut(s) | 273 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1108, 2054 |
| Bse118I | RCCGGY | 2 cut(s) | 281, 851 |
| Bse1I | ACTGG | 6 cut(s) | 570, 666, 762, 1113, 1327, 1830 |
| Bse3DI | GCAATG | 3 cut(s) | 931, 1470, 1815 |
| Bse8I | GATNNNNATC | 3 cut(s) | 623, 918, 1518 |
| BseBI | CCWGG | 1 cut(s) | 1677 |
| BseCI | ATCGAT | 1 cut(s) | 168 |
| BseGI | GGATG | 1 cut(s) | 2044 |
| BseJI | GATNNNNATC | 3 cut(s) | 623, 918, 1518 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1108, 2054 |
| BseMI | GCAATG | 3 cut(s) | 931, 1470, 1815 |
| BseMII | CTCAG | 7 cut(s) | 128, 432, 747, 1242, 1374, 1643, 1706 |
| BseNI | ACTGG | 6 cut(s) | 570, 666, 762, 1113, 1327, 1830 |
| BseSI | GKGCMC | 1 cut(s) | 933 |
| BseXI | GCAGC | 6 cut(s) | 107, 218, 1221, 1224, 2014, 2072 |
| BsgI | GTGCAG | 2 cut(s) | 1228, 1865 |
| Bsh1236I | CGCG | 1 cut(s) | 324 |
| BshFI | GGCC | 3 cut(s) | 1544, 1656, 1780 |
| BshVI | ATCGAT | 1 cut(s) | 168 |
| BsiHKAI | GWGCWC | 3 cut(s) | 933, 1630, 1815 |
| BsiSI | CCGG | 3 cut(s) | 274, 282, 852 |
| BslFI | GGGAC | 1 cut(s) | 635 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1108, 2054 |
| BsmAI | GTCTC | 2 cut(s) | 1327, 1726 |
| BsmFI | GGGAC | 1 cut(s) | 635 |
| BsmI | GAATGC | 1 cut(s) | 1985 |
| BsnI | GGCC | 3 cut(s) | 1544, 1656, 1780 |
| Bso31I | GGTCTC | 1 cut(s) | 1327 |
| Bsp1286I | GDGCHC | 3 cut(s) | 933, 1630, 1815 |
| Bsp1407I | TGTACA | 1 cut(s) | 940 |
| Bsp143I | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| Bsp68I | TCGCGA | 1 cut(s) | 324 |
| BspACI | CCGC | 4 cut(s) | 152, 295, 423, 1868 |
| BspANI | GGCC | 3 cut(s) | 1544, 1656, 1780 |
| BspCNI | CTCAG | 7 cut(s) | 127, 431, 746, 1241, 1373, 1642, 1705 |
| BspDI | ATCGAT | 1 cut(s) | 168 |
| BspFNI | CGCG | 1 cut(s) | 324 |
| BspHI | TCATGA | 2 cut(s) | 343, 1198 |
| BspLI | GGNNCC | 2 cut(s) | 69, 315 |
| BspMI | ACCTGC | 1 cut(s) | 2183 |
| BspPI | GGATC | 3 cut(s) | 589, 921, 1527 |
| BspTNI | GGTCTC | 1 cut(s) | 1327 |
| BsrBI | CCGCTC | 1 cut(s) | 425 |
| BsrDI | GCAATG | 3 cut(s) | 931, 1470, 1815 |
| BsrFI | RCCGGY | 2 cut(s) | 281, 851 |
| BsrGI | TGTACA | 1 cut(s) | 940 |
| BsrI | ACTGG | 6 cut(s) | 570, 666, 762, 1113, 1327, 1830 |
| BssAI | RCCGGY | 2 cut(s) | 281, 851 |
| BssMI | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| BssSI | CACGAG | 1 cut(s) | 1560 |
| Bst2BI | CACGAG | 1 cut(s) | 1560 |
| Bst2UI | CCWGG | 1 cut(s) | 1677 |
| Bst4CI | ACNGT | 7 cut(s) | 200, 437, 601, 637, 676, 1022, 1971 |
| Bst6I | CTCTTC | 1 cut(s) | 1844 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2198 |
| BstAUI | TGTACA | 1 cut(s) | 940 |
| BstC8I | GCNNGC | 9 cut(s) | 295, 299, 693, 1103, 1194, 1243, 1782, 2016, 2060 |
| BstDEI | CTNAG | 8 cut(s) | 114, 418, 733, 1228, 1360, 1629, 1692, 2077 |
| BstF5I | GGATG | 1 cut(s) | 2044 |
| BstFNI | CGCG | 1 cut(s) | 324 |
| BstHHI | GCGC | 3 cut(s) | 125, 1217, 1306 |
| BstKTI | GATC | 7 cut(s) | 181, 328, 584, 916, 1067, 1522, 1941 |
| BstMAI | GTCTC | 2 cut(s) | 1327, 1726 |
| BstMBI | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 129, 486, 1745, 1777, 2011, 2024, 2082, 2148, 2198 |
| BstNI | CCWGG | 1 cut(s) | 1677 |
| BstNSI | RCATGY | 4 cut(s) | 1196, 2018, 2034, 2062 |
| BstSCI | CCNGG | 1 cut(s) | 1675 |
| BstSFI | CTRYAG | 1 cut(s) | 1018 |
| BstSLI | GKGCMC | 1 cut(s) | 933 |
| BstUI | CGCG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 6 cut(s) | 107, 218, 1221, 1224, 2014, 2072 |
| BstV2I | GAAGAC | 2 cut(s) | 383, 1818 |
| Bsu15I | ATCGAT | 1 cut(s) | 168 |
| BsuRI | GGCC | 3 cut(s) | 1544, 1656, 1780 |
| BsuTUI | ATCGAT | 1 cut(s) | 168 |
| BtgZI | GCGATG | 1 cut(s) | 905 |
| BtsCI | GGATG | 1 cut(s) | 2044 |
| BtsI | GCAGTG | 2 cut(s) | 1258, 1414 |
| BtsIMutI | CAGTG | 5 cut(s) | 577, 606, 1258, 1320, 1414 |
| BtuMI | TCGCGA | 1 cut(s) | 324 |
| BveI | ACCTGC | 1 cut(s) | 2183 |
| Cac8I | GCNNGC | 9 cut(s) | 295, 299, 693, 1103, 1194, 1243, 1782, 2016, 2060 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1108, 2198 |
| CciI | TCATGA | 2 cut(s) | 343, 1198 |
| CfoI | GCGC | 3 cut(s) | 125, 1217, 1306 |
| Cfr10I | RCCGGY | 2 cut(s) | 281, 851 |
| Cfr13I | GGNCC | 2 cut(s) | 67, 1778 |
| ClaI | ATCGAT | 1 cut(s) | 168 |
| Csp6I | GTAC | 5 cut(s) | 663, 744, 789, 941, 1187 |
| CviQI | GTAC | 5 cut(s) | 663, 744, 789, 941, 1187 |
| DdeI | CTNAG | 8 cut(s) | 114, 418, 733, 1228, 1360, 1629, 1692, 2077 |
| DpnI | GATC | 7 cut(s) | 180, 327, 583, 915, 1066, 1521, 1940 |
| DpnII | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| DraI | TTTAAA | 2 cut(s) | 1494, 1593 |
| DraIII | CACNNNGTG | 1 cut(s) | 953 |
| Eam1104I | CTCTTC | 1 cut(s) | 1844 |
| EarI | CTCTTC | 1 cut(s) | 1844 |
| EciI | GGCGGA | 1 cut(s) | 1883 |
| Ecl136II | GAGCTC | 2 cut(s) | 1628, 1813 |
| Eco147I | AGGCCT | 2 cut(s) | 1544, 1656 |
| Eco24I | GRGCYC | 2 cut(s) | 1630, 1815 |
| Eco31I | GGTCTC | 1 cut(s) | 1327 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Eco53kI | GAGCTC | 2 cut(s) | 1628, 1813 |
| EcoICRI | GAGCTC | 2 cut(s) | 1628, 1813 |
| EcoO109I | RGGNCCY | 1 cut(s) | 67 |
| EcoRI | GAATTC | 2 cut(s) | 536, 964 |
| EcoRII | CCWGG | 1 cut(s) | 1675 |
| EcoT22I | ATGCAT | 1 cut(s) | 1987 |
| EcoT38I | GRGCYC | 2 cut(s) | 1630, 1815 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1928, 1960 |
| FaqI | GGGAC | 1 cut(s) | 635 |
| FauI | CCCGC | 1 cut(s) | 302 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| FblI | GTMKAC | 4 cut(s) | 268, 766, 856, 1091 |
| Fnu4HI | GCNGC | 7 cut(s) | 121, 232, 423, 1210, 1213, 2028, 2086 |
| FokI | GGATG | 1 cut(s) | 2031 |
| FriOI | GRGCYC | 2 cut(s) | 1630, 1815 |
| Fsp4HI | GCNGC | 7 cut(s) | 121, 232, 423, 1210, 1213, 2028, 2086 |
| FspBI | CTAG | 3 cut(s) | 1437, 1647, 1838 |
| FspI | TGCGCA | 1 cut(s) | 124 |
| GlaI | GCGC | 3 cut(s) | 124, 1216, 1305 |
| GluI | GCNGC | 7 cut(s) | 121, 232, 423, 1210, 1213, 2028, 2086 |
| HaeIII | GGCC | 3 cut(s) | 1544, 1656, 1780 |
| HapII | CCGG | 3 cut(s) | 274, 282, 852 |
| HhaI | GCGC | 3 cut(s) | 125, 1217, 1306 |
| Hin6I | GCGC | 3 cut(s) | 123, 1215, 1304 |
| HinP1I | GCGC | 3 cut(s) | 123, 1215, 1304 |
| HincII | GTYRAC | 1 cut(s) | 1719 |
| HindII | GTYRAC | 1 cut(s) | 1719 |
| HindIII | AAGCTT | 2 cut(s) | 1949, 2074 |
| HpaII | CCGG | 3 cut(s) | 274, 282, 852 |
| HphI | GGTGA | 3 cut(s) | 247, 1665, 1753 |
| HpyAV | CCTTC | 7 cut(s) | 240, 316, 329, 979, 1005, 1646, 2073 |
| HpyCH4III | ACNGT | 7 cut(s) | 200, 437, 601, 637, 676, 1022, 1971 |
| HpyCH4IV | ACGT | 1 cut(s) | 1047 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 129, 486, 1745, 1777, 2011, 2024, 2082, 2148, 2198 |
| HpyF3I | CTNAG | 8 cut(s) | 114, 418, 733, 1228, 1360, 1629, 1692, 2077 |
| HpySE526I | ACGT | 1 cut(s) | 1047 |
| HspAI | GCGC | 3 cut(s) | 123, 1215, 1304 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| LmnI | GCTCC | 1 cut(s) | 1425 |
| Lsp1109I | GCAGC | 6 cut(s) | 107, 218, 1221, 1224, 2014, 2072 |
| LweI | GCATC | 4 cut(s) | 1897, 1972, 2053, 2118 |
| MaeI | CTAG | 3 cut(s) | 1437, 1647, 1838 |
| MaeII | ACGT | 1 cut(s) | 1047 |
| MaeIII | GTNAC | 3 cut(s) | 413, 682, 1725 |
| MalI | GATC | 7 cut(s) | 180, 327, 583, 915, 1066, 1521, 1940 |
| MbiI | CCGCTC | 1 cut(s) | 425 |
| MboI | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| MfeI | CAATTG | 1 cut(s) | 897 |
| MhlI | GDGCHC | 3 cut(s) | 933, 1630, 1815 |
| MlyI | GAGTC | 3 cut(s) | 410, 725, 1652 |
| MmeI | TCCRAC | 3 cut(s) | 162, 421, 1578 |
| Mph1103I | ATGCAT | 1 cut(s) | 1987 |
| MroXI | GAANNNNTTC | 2 cut(s) | 390, 968 |
| MseI | TTAA | 8 cut(s) | 42, 606, 1263, 1493, 1592, 1709, 1955, 2207 |
| MslI | CAYNNNNRTG | 7 cut(s) | 342, 348, 924, 936, 1041, 1140, 1197 |
| MspA1I | CMGCKG | 1 cut(s) | 551 |
| MspI | CCGG | 3 cut(s) | 274, 282, 852 |
| MspR9I | CCNGG | 1 cut(s) | 1677 |
| MunI | CAATTG | 1 cut(s) | 897 |
| Mva1269I | GAATGC | 1 cut(s) | 1985 |
| MvaI | CCWGG | 1 cut(s) | 1677 |
| MvnI | CGCG | 1 cut(s) | 324 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 129, 486, 1745, 1777, 2011, 2024, 2082, 2148, 2198 |
| NdeII | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| NlaIV | GGNNCC | 2 cut(s) | 69, 315 |
| NmeAIII | GCCGAG | 1 cut(s) | 2168 |
| NmuCI | GTSAC | 1 cut(s) | 413 |
| NruI | TCGCGA | 1 cut(s) | 324 |
| NsbI | TGCGCA | 1 cut(s) | 124 |
| NsiI | ATGCAT | 1 cut(s) | 1987 |
| NspI | RCATGY | 4 cut(s) | 1196, 2018, 2034, 2062 |
| OliI | CACNNNNGTG | 1 cut(s) | 936 |
| PaeI | GCATGC | 3 cut(s) | 1196, 2018, 2062 |
| PagI | TCATGA | 2 cut(s) | 343, 1198 |
| PceI | AGGCCT | 2 cut(s) | 1544, 1656 |
| PctI | GAATGC | 1 cut(s) | 1985 |
| PdmI | GAANNNNTTC | 2 cut(s) | 390, 968 |
| PfeI | GAWTC | 9 cut(s) | 224, 521, 624, 776, 821, 866, 893, 1256, 1688 |
| PflFI | GACNNNGTC | 1 cut(s) | 447 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1108, 2054 |
| PkrI | GCNGC | 7 cut(s) | 122, 233, 424, 1211, 1214, 2029, 2087 |
| PleI | GAGTC | 3 cut(s) | 410, 725, 1651 |
| PpsI | GAGTC | 3 cut(s) | 410, 725, 1651 |
| PpuMI | RGGWCCY | 1 cut(s) | 67 |
| Psp124BI | GAGCTC | 2 cut(s) | 1630, 1815 |
| Psp5II | RGGWCCY | 1 cut(s) | 67 |
| Psp6I | CCWGG | 1 cut(s) | 1675 |
| PspGI | CCWGG | 1 cut(s) | 1675 |
| PspN4I | GGNNCC | 2 cut(s) | 69, 315 |
| PspPI | GGNCC | 2 cut(s) | 67, 1778 |
| PspPPI | RGGWCCY | 1 cut(s) | 67 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1108, 2198 |
| PsyI | GACNNNGTC | 1 cut(s) | 447 |
| PvuII | CAGCTG | 1 cut(s) | 551 |
| RruI | TCGCGA | 1 cut(s) | 324 |
| RsaI | GTAC | 5 cut(s) | 664, 745, 790, 942, 1188 |
| RsaNI | GTAC | 5 cut(s) | 663, 744, 789, 941, 1187 |
| RseI | CAYNNNNRTG | 7 cut(s) | 342, 348, 924, 936, 1041, 1140, 1197 |
| SacI | GAGCTC | 2 cut(s) | 1630, 1815 |
| SaqAI | TTAA | 8 cut(s) | 42, 606, 1263, 1493, 1592, 1709, 1955, 2207 |
| SatI | GCNGC | 7 cut(s) | 121, 232, 423, 1210, 1213, 2028, 2086 |
| Sau3AI | GATC | 7 cut(s) | 178, 325, 581, 913, 1064, 1519, 1938 |
| Sau96I | GGNCC | 2 cut(s) | 67, 1778 |
| SchI | GAGTC | 3 cut(s) | 410, 725, 1652 |
| ScrFI | CCNGG | 1 cut(s) | 1677 |
| SduI | GDGCHC | 3 cut(s) | 933, 1630, 1815 |
| SfaNI | GCATC | 4 cut(s) | 1897, 1972, 2053, 2118 |
| SfcI | CTRYAG | 1 cut(s) | 1018 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 342, 348, 924, 936, 1041, 1140, 1197 |
| SmlI | CTYRAG | 1 cut(s) | 1477 |
| SmoI | CTYRAG | 1 cut(s) | 1477 |
| SphI | GCATGC | 3 cut(s) | 1196, 2018, 2062 |
| SseBI | AGGCCT | 2 cut(s) | 1544, 1656 |
| SsiI | CCGC | 4 cut(s) | 152, 295, 423, 1868 |
| SspI | AATATT | 1 cut(s) | 1858 |
| SspMI | CTAG | 3 cut(s) | 1437, 1647, 1838 |
| SstI | GAGCTC | 2 cut(s) | 1630, 1815 |
| StuI | AGGCCT | 2 cut(s) | 1544, 1656 |
| StyD4I | CCNGG | 1 cut(s) | 1675 |
| TaaI | ACNGT | 7 cut(s) | 200, 437, 601, 637, 676, 1022, 1971 |
| TaiI | ACGT | 1 cut(s) | 1050 |
| TaqI | TCGA | 3 cut(s) | 168, 244, 1117 |
| TatI | WGTACW | 3 cut(s) | 743, 940, 1186 |
| TauI | GCSGC | 1 cut(s) | 425 |
| TfiI | GAWTC | 9 cut(s) | 224, 521, 624, 776, 821, 866, 893, 1256, 1688 |
| Tru1I | TTAA | 8 cut(s) | 42, 606, 1263, 1493, 1592, 1709, 1955, 2207 |
| Tru9I | TTAA | 8 cut(s) | 42, 606, 1263, 1493, 1592, 1709, 1955, 2207 |
| TscAI | CASTG | 5 cut(s) | 577, 606, 1258, 1327, 1414 |
| TseFI | GTSAC | 1 cut(s) | 413 |
| TseI | GCWGC | 6 cut(s) | 120, 231, 1209, 1212, 2027, 2085 |
| Tsp45I | GTSAC | 1 cut(s) | 413 |
| TspGWI | ACGGA | 1 cut(s) | 236 |
| TspRI | CASTG | 5 cut(s) | 577, 606, 1258, 1327, 1414 |
| Tth111I | GACNNNGTC | 1 cut(s) | 447 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1108, 2054 |
| VneI | GTGCAC | 1 cut(s) | 929 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XapI | RAATTY | 2 cut(s) | 536, 964 |
| XceI | RCATGY | 4 cut(s) | 1196, 2018, 2034, 2062 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 468 |
| XmiI | GTMKAC | 4 cut(s) | 268, 766, 856, 1091 |
| XmnI | GAANNNNTTC | 2 cut(s) | 390, 968 |
| XspI | CTAG | 3 cut(s) | 1437, 1647, 1838 |
| Zsp2I | ATGCAT | 1 cut(s) | 1987 |