Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0016338

Physical Location & Seq

Genomic Coordinates Reverse (-)

4597830 .. 4600351

Gene Structure 2522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG063400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGACTGAGCTCCCAATGGCGCGTGAAACAGACGACTCGTCCTCTCCCCCAAACAAACGCCTGAAAACCCTAAATCCCCAAATCGAATCCCAATCGGATCCAAATCAACCCGAAACCCCGCCGAAAACCGATGATTCACCGCCCGAACGCTGCGCTATTTGCTTCTTGGACGACGGCAAAGCCGCCCGAGGCAAAATCGACTGCTGCGACCACTACTTCTGCTTCTTGTGCATCAAAGAATGGGCCAAGACCGAGTCACGGTGCCCAATGTGCCGGCGGCGGTTCAACACCATCCGTCGACCGCCGAAAGTCGGCGTCTTTGTCCGTGAGCGCGTCGTTAAGGTCCCGGTTCGAGATCAGGGGAATAAAAGTGGGCATGTTGATGCTTATGAAGAAGTTGCGTGTAATGTGTGTAGCTCTATGGCAGATGATCATTTTATGTTGCTCTGTGATCTTTGCGACGGAGCGGCTCATACTTACTGTGTTGGGCTTGGTTATACCGTGCCTGAAGGTGATTGGTTTTGCAATGACTGCATTGCTTCCAGGCCTGAGCTTGCTAATGTGAATGGTGGCGATGATGAATGTGGTATGATCCCAACAGAAGCTGTGCCTGTGCCTTGTGTCTCGGTATGTGATATTGTAAGAGAATCAAATAGCTCAGCTGTTGAAAGACCTATAAGAATCACTCCAAATCCAAATCAGTCTTCGGTTGCTCCTCAAGTTGCTAGGCCAGCAAAAGCGCCACCAAGGGTGGCCAGTATATCAGCTGAATCGGCTGCAAGAACATTGGATAGGTGTCGAAATGTGCAGACTCGCATACACACACTTCGTGAGAATTGGAATGGCTTCCGGAGTGGCGCATTGAGCTTCCCTGCCAGTTCATCGAAATTGAAAGCTAGCTGCAGCAGTAGTCAAGAACATAAAAATGGTGTAATGTCTCATGAAAGATCAGGCCAAACAGAATCTTCATCTTCTCCAACTCGTCAGCAACTAGAAAATCGAGATGGTTGTGACCCCCATGATATTGAAAAGGCATGGAAAATGCTGGAAAAGGCAAAGTCAAAACAGTGTATACATAAAAAGAACAGCAGTGGGGTTCAGTTGTTGCAGTTCTCGAAACTTCCTTCTTGCAGAACAAGTGCTTCTAAGGAACCAAATCCATGTCCTGATATATCAGGTCAACCACAATCCTCGTCTTTCACAGGCTGTCAGCAGCAGCAAAATCAAGTTGGTTGTGGTTCGCGTGATATTGACAAGGCATGGAAAATGATTTATAGGGCAAAGTTGAAACAACATGTTCACGAAAACACCAGCAGTGCCCTGAAGCTTCCTTCTAGGAAAGCAAATGCTTCAGAAGAAGCAAGTAATGTGAATTCAAGTTTCGATACAATGAAAAGCCAGCAACTTGGAGCTCTGAATCAGGGAAGACCAGGAATGGAGAAGGTCTACAAAGGTAAGGAAAGGCAGTCTAGGGTCACAACTCAGGAGGCTGTAGAGTCAATCCTGGGCATTTCATGTAGTAATTCTTCACCAGGATTATTTATACCTCCATTTCCTAGGAACATAAATAGGTCAGCTTCATTACAGAAAAATCAAGCTGCACTAGGTATGATTACTGAACAAAACGGTTCTGCTTCTTCAATGATGGAAGGAACTTCTAATTCTTATTGTGGCAAACCCGAGCTCAGTACATCTTCTTCCGGAAACTTAGAAGAGGTCTGTGTGGAAAGCAGAGCAAGAAAAGTTGACGATGAAACCAAAAGTGAGATCCAGTCTCTTGTCAAGATGAACTTGAAGCTTCTAAGCAAAGACCAGCGCTTAGGAGTTGATGCATTTAAACAAATTGCAAGGGCTGCCACACATACCGTCTTGGCCGCATGTGGTTTAGAACATCATCACAAGTCCGCCGTGTATTCCTTCCCAAGCTTAGTATGCTGCCACACCGAGCAGCTTCAGCTGCCACATAAATCAAATTTGATGCGTAAGGCCTGCCGAGATTGCTTTTATGGGTTTGTGAAAGATGTTGTCAGTTCGATTCTGCAAAATCATGATGGGTTCCGACTGCGGGATTCAAGTCACAAACAGAAATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0006139 GO:0006351 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0019904 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0070063 GO:0071704 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

697

Amino Acids

76.77

Weight (kDa)

8.66

Isoelectric Point (pI)

58.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	50 - 92	6.6e-07	Ring finger domain
PHD	PF00628	135 - 178	1.1e-08	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016338)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13310
malus_domestica	MD06G1206300.v1.1
prunus_persica	Prupe.5G210700_v2.0.a1 Prupe.5G210700_v2.0.a1
pyrus_communis	pycom06g18420
rosa_chinensis	RchiOBHm_Chr7g0183831
rosa_laevigata	RLG00000005017
rosa_multiflora	Rmu_sc0013966.1_g000004
rosa_roxburghii	Rroxscaffold_3G00270150
rosa_rugosa	Rorug06G0461100
rosa_samantha	Rh7AG061800 Rh7BG061900 Rh7CG063400 Rh7DG061600
rosa_wichuraiana	Rw7G005110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	261
AccBSI	CCGCTC	1 cut(s)	467
AccI	GTMKAC	3 cut(s)	298, 1072, 1446
AccII	CGCG	3 cut(s)	22, 333, 1243
AccIII	TCCGGA	2 cut(s)	849, 1700
AclWI	GGATC	4 cut(s)	92, 105, 586, 1762
AcoI	YGGCCR	2 cut(s)	753, 1872
AcsI	RAATTY	2 cut(s)	1372, 1972
AcuI	CTGAAG	4 cut(s)	528, 1335, 1343, 1937
AcyI	GRCGYC	1 cut(s)	315
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	1 cut(s)	1690
AfeI	AGCGCT	1 cut(s)	1817
AfiI	CCNNNNNNNGG	3 cut(s)	258, 311, 2065
AflIII	ACRYGT	1 cut(s)	1294
AgsI	TTSAA	9 cut(s)	286, 668, 892, 1028, 1288, 1377, 1641, 1795, 2073
AhdI	GACNNNNNGTC	1 cut(s)	37
AjnI	CCWGG	4 cut(s)	542, 1429, 1503, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	688, 720
Alw21I	GWGCWC	3 cut(s)	12, 1414, 1686
Alw26I	GTCTC	3 cut(s)	628, 942, 1779
AlwI	GGATC	4 cut(s)	92, 105, 586, 1762
AlwNI	CAGNNNCTG	1 cut(s)	605
Ama87I	CYCGRG	2 cut(s)	186, 1679
Aor13HI	TCCGGA	2 cut(s)	849, 1700
Aor51HI	AGCGCT	1 cut(s)	1817
AoxI	GGCC	7 cut(s)	243, 545, 728, 753, 952, 1872, 1986
ApoI	RAATTY	2 cut(s)	1372, 1972
Asp700I	GAANNNNTTC	1 cut(s)	845
AspA2I	CCTAGG	1 cut(s)	1556
AspLEI	GCGC	6 cut(s)	22, 155, 333, 742, 860, 1818
AspS9I	GGNCC	2 cut(s)	243, 343
AsuC2I	CCSGG	1 cut(s)	347
AsuHPI	GGTGA	3 cut(s)	129, 524, 1521
AsuNHI	GCTAGC	1 cut(s)	896
AvaI	CYCGRG	2 cut(s)	186, 1679
AvaII	GGWCC	1 cut(s)	343
AvrII	CCTAGG	1 cut(s)	1556
BaeGI	GKGCMC	2 cut(s)	266, 1321
BalI	TGGCCA	1 cut(s)	755
BamHI	GGATCC	1 cut(s)	97
BanI	GGYRCC	1 cut(s)	261
BanII	GRGCYC	3 cut(s)	12, 1414, 1686
BarI	GAAGNNNNNNTAC	4 cut(s)	1510, 1542, 1681, 1713
BbsI	GAAGAC	2 cut(s)	696, 1432
Bbv12I	GWGCWC	3 cut(s)	12, 1414, 1686
BccI	CCATC	4 cut(s)	299, 998, 1639, 2045
BceAI	ACGGC	2 cut(s)	190, 1892
BciT130I	CCWGG	4 cut(s)	544, 1431, 1505, 1533
BclI	TGATCA	1 cut(s)	430
BcnI	CCSGG	1 cut(s)	347
BcoDI	GTCTC	3 cut(s)	628, 942, 1779
BfaI	CTAG	7 cut(s)	726, 897, 992, 1335, 1470, 1557, 1604
BfmI	CTRYAG	2 cut(s)	901, 1491
BfoI	RGCGCY	2 cut(s)	743, 1819
BlnI	CCTAGG	1 cut(s)	1556
BlpI	GCTNAGC	1 cut(s)	658
Bme1390I	CCNGG	5 cut(s)	347, 544, 1431, 1505, 1533
Bme18I	GGWCC	1 cut(s)	343
BmeRI	GACNNNNNGTC	1 cut(s)	37
BmeT110I	CYCGRG	2 cut(s)	186, 1679
BmgT120I	GGNCC	2 cut(s)	243, 343
BmiI	GGNNCC	5 cut(s)	99, 263, 345, 1152, 2057
BmrFI	CCNGG	5 cut(s)	347, 544, 1431, 1505, 1533
BmsI	GCATC	4 cut(s)	240, 373, 1819, 1968
BmtI	GCTAGC	1 cut(s)	900
BpiI	GAAGAC	2 cut(s)	696, 1432
Bpu10I	CCTNAGC	2 cut(s)	549, 1819
Bpu1102I	GCTNAGC	1 cut(s)	658
BpuEI	CTTGAG	1 cut(s)	702
BpuMI	CCSGG	1 cut(s)	347
BsaBI	GATNNNNATC	1 cut(s)	102
BsaHI	GRCGYC	1 cut(s)	315
BsaJI	CCNNGG	4 cut(s)	187, 746, 1504, 1556
BsaWI	WCCGGW	2 cut(s)	849, 1700
Bsc4I	CCNNNNNNNGG	3 cut(s)	258, 311, 2065
Bse118I	RCCGGY	1 cut(s)	273
Bse1I	ACTGG	3 cut(s)	756, 876, 1771
Bse3DI	GCAATG	2 cut(s)	532, 534
Bse8I	GATNNNNATC	1 cut(s)	102
BseAI	TCCGGA	2 cut(s)	849, 1700
BseBI	CCWGG	4 cut(s)	544, 1431, 1505, 1533
BseDI	CCNNGG	4 cut(s)	187, 746, 1504, 1556
BseGI	GGATG	1 cut(s)	291
BseJI	GATNNNNATC	1 cut(s)	102
BseLI	CCNNNNNNNGG	3 cut(s)	258, 311, 2065
BseMI	GCAATG	2 cut(s)	532, 534
BseMII	CTCAG	4 cut(s)	540, 672, 1496, 1699
BseNI	ACTGG	3 cut(s)	756, 876, 1771
BseRI	GAGGAG	1 cut(s)	705
BseSI	GKGCMC	2 cut(s)	266, 1321
BsgI	GTGCAG	2 cut(s)	827, 1584
Bsh1236I	CGCG	3 cut(s)	22, 333, 1243
Bsh1285I	CGRYCG	1 cut(s)	302
BshFI	GGCC	7 cut(s)	245, 547, 730, 755, 954, 1874, 1988
BshNI	GGYRCC	1 cut(s)	261
BsiEI	CGRYCG	1 cut(s)	302
BsiHKAI	GWGCWC	3 cut(s)	12, 1414, 1686
BsiHKCI	CYCGRG	2 cut(s)	186, 1679
BsiSI	CCGG	4 cut(s)	274, 347, 850, 1701
BslFI	GGGAC	1 cut(s)	329
BslI	CCNNNNNNNGG	3 cut(s)	258, 311, 2065
BsmAI	GTCTC	3 cut(s)	628, 942, 1779
BsmFI	GGGAC	1 cut(s)	329
BsnI	GGCC	7 cut(s)	245, 547, 730, 755, 954, 1874, 1988
BsoBI	CYCGRG	2 cut(s)	186, 1679
Bsp1286I	GDGCHC	5 cut(s)	12, 266, 1321, 1414, 1686
Bsp13I	TCCGGA	2 cut(s)	849, 1700
Bsp143I	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
Bsp1720I	GCTNAGC	1 cut(s)	658
BspANI	GGCC	7 cut(s)	245, 547, 730, 755, 954, 1874, 1988
BspCNI	CTCAG	4 cut(s)	541, 671, 1495, 1698
BspEI	TCCGGA	2 cut(s)	849, 1700
BspFNI	CGCG	3 cut(s)	22, 333, 1243
BspHI	TCATGA	2 cut(s)	940, 2047
BspLI	GGNNCC	5 cut(s)	99, 263, 345, 1152, 2057
BspMAI	CTGCAG	1 cut(s)	905
BspOI	GCTAGC	1 cut(s)	900
BspPI	GGATC	4 cut(s)	92, 105, 586, 1762
BspT107I	GGYRCC	1 cut(s)	261
BsrBI	CCGCTC	1 cut(s)	467
BsrDI	GCAATG	2 cut(s)	532, 534
BsrFI	RCCGGY	1 cut(s)	273
BsrI	ACTGG	3 cut(s)	756, 876, 1771
BssAI	RCCGGY	1 cut(s)	273
BssECI	CCNNGG	4 cut(s)	187, 746, 1504, 1556
BssMI	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
BssNAI	GTATAC	1 cut(s)	1073
BssNI	GRCGYC	1 cut(s)	315
BssT1I	CCWWGG	2 cut(s)	746, 1556
Bst1107I	GTATAC	1 cut(s)	1073
Bst2UI	CCWGG	4 cut(s)	544, 1431, 1505, 1533
Bst4CI	ACNGT	6 cut(s)	261, 482, 502, 1068, 1628, 1867
Bst6I	CTCTTC	1 cut(s)	1707
BstACI	GRCGYC	1 cut(s)	315
BstAPI	GCANNNNNTGC	2 cut(s)	531, 1853
BstC8I	GCNNGC	6 cut(s)	275, 555, 732, 898, 1400, 1990
BstF5I	GGATG	1 cut(s)	291
BstFNI	CGCG	3 cut(s)	22, 333, 1243
BstH2I	RGCGCY	2 cut(s)	743, 1819
BstHHI	GCGC	6 cut(s)	22, 155, 333, 742, 860, 1818
BstKTI	GATC	7 cut(s)	100, 358, 433, 454, 594, 950, 1770
BstMAI	GTCTC	3 cut(s)	628, 942, 1779
BstMBI	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
BstMCI	CGRYCG	1 cut(s)	302
BstNI	CCWGG	4 cut(s)	544, 1431, 1505, 1533
BstNSI	RCATGY	3 cut(s)	380, 1298, 1881
BstSCI	CCNGG	5 cut(s)	345, 542, 1429, 1503, 1531
BstSFI	CTRYAG	2 cut(s)	901, 1491
BstSLI	GKGCMC	2 cut(s)	266, 1321
BstUI	CGCG	3 cut(s)	22, 333, 1243
BstV2I	GAAGAC	2 cut(s)	696, 1432
BstX2I	RGATCY	2 cut(s)	97, 1767
BstXI	CCANNNNNNTGG	1 cut(s)	1406
BstYI	RGATCY	2 cut(s)	97, 1767
BstZ17I	GTATAC	1 cut(s)	1073
BsuRI	GGCC	7 cut(s)	245, 547, 730, 755, 954, 1874, 1988
BtgZI	GCGATG	1 cut(s)	588
BtsCI	GGATG	1 cut(s)	291
BtsI	GCAGTG	2 cut(s)	1096, 1321
BtsIMutI	CAGTG	3 cut(s)	1073, 1096, 1321
Cac8I	GCNNGC	6 cut(s)	275, 555, 732, 898, 1400, 1990
CaiI	CAGNNNCTG	1 cut(s)	605
CciI	TCATGA	2 cut(s)	940, 2047
CfoI	GCGC	6 cut(s)	22, 155, 333, 742, 860, 1818
Cfr10I	RCCGGY	1 cut(s)	273
Cfr13I	GGNCC	2 cut(s)	243, 343
CseI	GACGC	2 cut(s)	304, 322
Csp6I	GTAC	1 cut(s)	1689
CviQI	GTAC	1 cut(s)	1689
DpnI	GATC	7 cut(s)	99, 357, 432, 453, 593, 949, 1769
DpnII	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
DraI	TTTAAA	1 cut(s)	1837
DraIII	CACNNNGTG	1 cut(s)	830
DriI	GACNNNNNGTC	1 cut(s)	37
EaeI	YGGCCR	2 cut(s)	753, 1872
Eam1104I	CTCTTC	1 cut(s)	1707
Eam1105I	GACNNNNNGTC	1 cut(s)	37
EarI	CTCTTC	1 cut(s)	1707
EciI	GGCGGA	1 cut(s)	1894
Ecl136II	GAGCTC	3 cut(s)	10, 1412, 1684
Eco130I	CCWWGG	2 cut(s)	746, 1556
Eco147I	AGGCCT	2 cut(s)	547, 1988
Eco24I	GRGCYC	3 cut(s)	12, 1414, 1686
Eco47I	GGWCC	1 cut(s)	343
Eco47III	AGCGCT	1 cut(s)	1817
Eco53kI	GAGCTC	3 cut(s)	10, 1412, 1684
Eco57I	CTGAAG	4 cut(s)	528, 1335, 1343, 1937
Eco88I	CYCGRG	2 cut(s)	186, 1679
EcoICRI	GAGCTC	3 cut(s)	10, 1412, 1684
EcoO109I	RGGNCCY	1 cut(s)	343
EcoRI	GAATTC	1 cut(s)	1372
EcoRII	CCWGG	4 cut(s)	542, 1429, 1503, 1531
EcoT14I	CCWWGG	2 cut(s)	746, 1556
EcoT22I	ATGCAT	1 cut(s)	1834
EcoT38I	GRGCYC	3 cut(s)	12, 1414, 1686
ErhI	CCWWGG	2 cut(s)	746, 1556
FalI	AAGNNNNNCTT	2 cut(s)	1775, 1807
FaqI	GGGAC	1 cut(s)	329
FauI	CCCGC	2 cut(s)	126, 2058
FbaI	TGATCA	1 cut(s)	430
FblI	GTMKAC	3 cut(s)	298, 1072, 1446
FokI	GGATG	1 cut(s)	278
FriOI	GRGCYC	3 cut(s)	12, 1414, 1686
FspBI	CTAG	7 cut(s)	726, 897, 992, 1335, 1470, 1557, 1604
GlaI	GCGC	6 cut(s)	21, 154, 332, 741, 859, 1817
HaeII	RGCGCY	2 cut(s)	743, 1819
HaeIII	GGCC	7 cut(s)	245, 547, 730, 755, 954, 1874, 1988
HapII	CCGG	4 cut(s)	274, 347, 850, 1701
HgaI	GACGC	2 cut(s)	304, 322
HhaI	GCGC	6 cut(s)	22, 155, 333, 742, 860, 1818
Hin1I	GRCGYC	1 cut(s)	315
Hin6I	GCGC	6 cut(s)	20, 153, 331, 740, 858, 1816
HinP1I	GCGC	6 cut(s)	20, 153, 331, 740, 858, 1816
HincII	GTYRAC	3 cut(s)	299, 1181, 1747
HindII	GTYRAC	3 cut(s)	299, 1181, 1747
HindIII	AAGCTT	3 cut(s)	1325, 1796, 1924
HpaII	CCGG	4 cut(s)	274, 347, 850, 1701
HphI	GGTGA	3 cut(s)	129, 524, 1521
Hpy166II	GTNNAC	6 cut(s)	299, 1073, 1181, 1300, 1447, 1747
Hpy188I	TCNGA	4 cut(s)	97, 1354, 1416, 2060
Hpy8I	GTNNAC	6 cut(s)	299, 1073, 1181, 1300, 1447, 1747
Hpy99I	CGWCG	4 cut(s)	176, 300, 338, 464
HpyAV	CCTTC	6 cut(s)	503, 1134, 1341, 1435, 1643, 1927
HpyCH4III	ACNGT	6 cut(s)	261, 482, 502, 1068, 1628, 1867
Hsp92I	GRCGYC	1 cut(s)	315
HspAI	GCGC	6 cut(s)	20, 153, 331, 740, 858, 1816
Kpn2I	TCCGGA	2 cut(s)	849, 1700
KroI	GCCGGC	1 cut(s)	273
KroNI	GCCGGC	1 cut(s)	275
Ksp22I	TGATCA	1 cut(s)	430
Kzo9I	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
LmnI	GCTCC	4 cut(s)	15, 464, 718, 1409
LweI	GCATC	4 cut(s)	240, 373, 1819, 1968
MaeI	CTAG	7 cut(s)	726, 897, 992, 1335, 1470, 1557, 1604
MaeIII	GTNAC	4 cut(s)	255, 1010, 1474, 2075
MalI	GATC	7 cut(s)	99, 357, 432, 453, 593, 949, 1769
MbiI	CCGCTC	1 cut(s)	467
MboI	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
MflI	RGATCY	2 cut(s)	97, 1767
MhlI	GDGCHC	5 cut(s)	12, 266, 1321, 1414, 1686
MlsI	TGGCCA	1 cut(s)	755
MluCI	AATT	8 cut(s)	835, 887, 1372, 1522, 1660, 1842, 1972, 2087
MluNI	TGGCCA	1 cut(s)	755
MlyI	GAGTC	4 cut(s)	29, 263, 805, 1505
MmeI	TCCRAC	2 cut(s)	1001, 2083
MnlI	CCTC	7 cut(s)	52, 182, 726, 1201, 1480, 1557, 1708
Mox20I	TGGCCA	1 cut(s)	755
Mph1103I	ATGCAT	1 cut(s)	1834
MroI	TCCGGA	2 cut(s)	849, 1700
MroNI	GCCGGC	1 cut(s)	273
MroXI	GAANNNNTTC	1 cut(s)	845
MscI	TGGCCA	1 cut(s)	755
MseI	TTAA	2 cut(s)	339, 1836
MslI	CAYNNNNRTG	2 cut(s)	381, 924
Msp20I	TGGCCA	1 cut(s)	755
MspA1I	CMGCKG	3 cut(s)	662, 767, 1957
MspI	CCGG	4 cut(s)	274, 347, 850, 1701
MspR9I	CCNGG	5 cut(s)	347, 544, 1431, 1505, 1533
MvaI	CCWGG	4 cut(s)	544, 1431, 1505, 1533
MvnI	CGCG	3 cut(s)	22, 333, 1243
NaeI	GCCGGC	1 cut(s)	275
NciI	CCSGG	1 cut(s)	347
NdeII	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
NgoMIV	GCCGGC	1 cut(s)	273
NheI	GCTAGC	1 cut(s)	896
NlaIV	GGNNCC	5 cut(s)	99, 263, 345, 1152, 2057
NmeAIII	GCCGAG	1 cut(s)	2018
NmuCI	GTSAC	4 cut(s)	255, 1010, 1474, 2075
NsiI	ATGCAT	1 cut(s)	1834
NspI	RCATGY	3 cut(s)	380, 1298, 1881
PagI	TCATGA	2 cut(s)	940, 2047
PceI	AGGCCT	2 cut(s)	547, 1988
PciI	ACATGT	1 cut(s)	1294
PcsI	WCGNNNNNNNCGW	1 cut(s)	204
PdiI	GCCGGC	1 cut(s)	275
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	9 cut(s)	86, 134, 647, 681, 770, 962, 1417, 2035, 2069
PflFI	GACNNNGTC	1 cut(s)	253
PleI	GAGTC	4 cut(s)	29, 262, 805, 1504
PpsI	GAGTC	4 cut(s)	29, 262, 805, 1504
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	1294
Psp124BI	GAGCTC	3 cut(s)	12, 1414, 1686
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	4 cut(s)	542, 1429, 1503, 1531
PspGI	CCWGG	4 cut(s)	542, 1429, 1503, 1531
PspN4I	GGNNCC	5 cut(s)	99, 263, 345, 1152, 2057
PspPI	GGNCC	2 cut(s)	243, 343
PspPPI	RGGWCCY	1 cut(s)	343
PstI	CTGCAG	1 cut(s)	905
PstNI	CAGNNNCTG	1 cut(s)	605
PsuI	RGATCY	2 cut(s)	97, 1767
PsyI	GACNNNGTC	1 cut(s)	253
PvuII	CAGCTG	3 cut(s)	662, 767, 1957
RsaI	GTAC	1 cut(s)	1690
RsaNI	GTAC	1 cut(s)	1689
RseI	CAYNNNNRTG	2 cut(s)	381, 924
SacI	GAGCTC	3 cut(s)	12, 1414, 1686
SalI	GTCGAC	1 cut(s)	297
SaqAI	TTAA	2 cut(s)	339, 1836
Sau3AI	GATC	7 cut(s)	97, 355, 430, 451, 591, 947, 1767
Sau96I	GGNCC	2 cut(s)	243, 343
SchI	GAGTC	4 cut(s)	29, 263, 805, 1505
ScrFI	CCNGG	5 cut(s)	347, 544, 1431, 1505, 1533
SduI	GDGCHC	5 cut(s)	12, 266, 1321, 1414, 1686
SfaNI	GCATC	4 cut(s)	240, 373, 1819, 1968
SfcI	CTRYAG	2 cut(s)	901, 1491
SinI	GGWCC	1 cut(s)	343
SmiMI	CAYNNNNRTG	2 cut(s)	381, 924
SmlI	CTYRAG	1 cut(s)	717
SmoI	CTYRAG	1 cut(s)	717
Sse9I	AATT	8 cut(s)	835, 887, 1372, 1522, 1660, 1842, 1972, 2087
SseBI	AGGCCT	2 cut(s)	547, 1988
SspMI	CTAG	7 cut(s)	726, 897, 992, 1335, 1470, 1557, 1604
SstI	GAGCTC	3 cut(s)	12, 1414, 1686
StuI	AGGCCT	2 cut(s)	547, 1988
StyD4I	CCNGG	5 cut(s)	345, 542, 1429, 1503, 1531
StyI	CCWWGG	2 cut(s)	746, 1556
TaaI	ACNGT	6 cut(s)	261, 482, 502, 1068, 1628, 1867
TaqII	GACCGA	1 cut(s)	266
TasI	AATT	8 cut(s)	835, 887, 1372, 1522, 1660, 1842, 1972, 2087
TatI	WGTACW	1 cut(s)	1688
TauI	GCSGC	4 cut(s)	185, 280, 470, 1877
TfiI	GAWTC	9 cut(s)	86, 134, 647, 681, 770, 962, 1417, 2035, 2069
Tru1I	TTAA	2 cut(s)	339, 1836
Tru9I	TTAA	2 cut(s)	339, 1836
TscAI	CASTG	3 cut(s)	1073, 1096, 1321
TseFI	GTSAC	4 cut(s)	255, 1010, 1474, 2075
Tsp45I	GTSAC	4 cut(s)	255, 1010, 1474, 2075
TspGWI	ACGGA	3 cut(s)	284, 314, 477
TspRI	CASTG	3 cut(s)	1073, 1096, 1321
Tth111I	GACNNNGTC	1 cut(s)	253
VpaK11BI	GGWCC	1 cut(s)	343
XapI	RAATTY	2 cut(s)	1372, 1972
XceI	RCATGY	3 cut(s)	380, 1298, 1881
XmaJI	CCTAGG	1 cut(s)	1556
XmiI	GTMKAC	3 cut(s)	298, 1072, 1446
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	7 cut(s)	726, 897, 992, 1335, 1470, 1557, 1604
Zsp2I	ATGCAT	1 cut(s)	1834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.